RLG00000005124

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0006932
Physical Location & Seq
Reverse (-)
65197776 .. 65204741
6966 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005124

Sequence Viewer

Length: 5067 bp
ATGGAGATTAGTGGAGAAGCTCTAGATGATGATGGCTCTGGATGGTTCGAAGTGAAAAAGAAACAGAGAAGTGGCTCAAAGTTGTCTCTACAGAGTTGGGTTGGGGGAAGTTCTGGGAAGAATGCTAACTCGTCGAGTAGTCACCCTTTATCAAGTGAGAACAGTAGGAATTATTTTGGCAAGCGCAGATCCCAGCTTCCAAAAGTAGGGGGAAATAGTGCTGTACATAGCCAAGGAAGTGGTGCAAGCACCATTCCTATGCCAAATAAGAGTAAAATGGGTGTTCCCTGTGATATTGGCATTGACAAGCAATGTGCTAAATATCCCATGTCATCTCCTTCATTTATTACAAATCCTGATGGTGAAACTAGAGATCTAGAGAAGATCCCTGCAAGAGATAACTCTGAAGTGGTTCATAAAATTAAGTGGGGGGATCTAGAGGATCTAGAGGATGATGGTTTGGCACTTCCTCTTACTAACGTTGTCGGCACCAGAATCAAGTTTGGTGCTATTGGAGATGAAAATCTGGTGGCCTCTAAAGAGCATGAGAATTGTCATAGTTTTGTTCCTTCTGTAAATTCACAAGAAAACAAACTGTTTGCAGCATCTGCGGATGCCAATAGTGTTTCTCACCAGACGGCGTTTGTGAATGATAAGGATCAATTGTATGAAGATAACTGCAAGGAGGTGGATATTATATCTGCTGAAAATGTTGAGGAGCCAATTCAGAATGACAAAATGGTTGATATGGATAACAATACTTCAAATTGCAAGGATATACATACCGAAAACATTGAAGCAGTCGCTGATGATCCTGTAAGTGCTAGCACTTTAGCTTGTGAAGAGGGTGGGACAGTGGGGAAAGTTGAAGCACCTGTGGTTGTAACTGAGGTAAGTGATCCTGCAATTTTTGAAGAATCAGGACCCAATGGCAGTTCAAGTGAAGTTCATATCTCCAAAGATAAAGACTTAGTTCCACCTGACAAGAGCAACCCAGAAATTTGTGCAGAGCCTACCCTCACACCATCTGGACATTATATGTTGAACTCAAATATGAGTGCCCTTGGAGATTGTGACACAGGTGAAAGCAAAGAAAGGTTTAGGCAGCGACTTTGGTGCTTTCTCTTTGAGAATCTTAACCGGGCTGTGGATGAGCTTTATCTTCTTTGTGAACTAGAGTGCGATGTAGAGCAGATGAAAGAGGCCATTCTTGTTCTTGAAGAGGCTCGCTCTGATTTCAGAAATCTGAATACTAGAGTGGAAGATTTTGAGAAAATAAAAAGGGCACCATCTCAGTTGGTTGATGGGGTGCCCATCACCTTGAAGAGTGACCATCGTAGGCCACATGCTCTTTCATGGGAGGTTAGAAGAATGACAACTTCCGCACACAAAGCAGAGATACTATCCTCATCTCTTGAGGCTTTCAAGAAAATTCAGAAAGAAAGAGCTAGCTTTTGTGCAGCCAATGATGCTAAACTTATGGGCCTTAAGTACACAAATATCCAATCTAGTGATAACCTCAATACATTACCTGCAAGAAATGATGGGAAATTTAATTCTAAAGAATCAACAATGAAGTTAAGAAGATATAGTGGAGGTTCAGATCTCGTTGAAGCTGTCATGAATGGGAATAAGAATACTGAATCAAGCAGTTCGAGCAGATTAAAGTTGGTACAAAATGGGCGTGTCTCTCAGAATTCATCTTCCTTTGTTGTTAATGCATCTAGATTGCCTCCTAGGGATAATTCTGCTGTTGGAAAAACTAAGAGAGAACAGTCTGGGTCTGAAGCTGAGAAGCTGCTTGCTAGGAAAGAAAAACTGTCAACAGAAGGTAGTGTTGAAAAAATTGCCAAGTTGACCAATCAGTCCAAAAAGCAAATTCCACTTTTGGAAAAAGATAAAGAAAAGAGGAATTCAGCTCCATGGAAATCCATGGATGCTTGGAAGGAGAAGAGGAATTGGGAGGCTGTTCTTTCATCTCCTTCTCTTGTGTCTTCCCGAGTTTCACATTCGCCTGGCTTGAGGAGGAAAAGTGCTGATCGTGCACGAATGTTGCATGATAAACTAATGTCTCCTGAAAAGAAGAAAAAAACTAGTTTGGATCTGAAGAGAGAGGCAGAAGAAAAGCATGCCCGTGCTATGAGAATCAGAAGCGAGCTAGAGAATGAGAGAGCTCAGAAGCTTCATCGTAGTTCAGAAAAGATGAATAGAGTTAATGAATTGCAGGCTGTAAAAAATATGAAGTTACGGGAGGGAATGCATGCTCGTCATCAACGCAGTGAGTCTCGACATGAAGCACATCTAGCTCAACGAGTGAAGAGAGCTGGTGATGAAAGCATCAAAGTAAAAGAGGTTCAGTTCATAACTTCCTTAAATGAAGAAAATAAAAAGCTTATTTTGCGCCAGAAGCATCATGATTCAGAACTGAGGAGAGCTGAAAAACTTCAAGTGATAAGAACTAAACAAAAAGAGGATATGGCAAGAGAAGAAGCTGTTTTAGAGCGGAGGAAACTCATTGAAGCTGAAAAGTTGCAGCGTCTTGCTGAAACACAGCGGAGAAAGGAAGAGGCTCAAGTTAGAAGGGAGGAGGAGCGTAAAGCATCAAGTGCAGCACGTGAAGCAAGGGCCATTGAACAACTTCGGAGGAAGGAGGAAAGAGCCAAAGCCCAGCAGGAGGAGGCTGAACTGCTGGCCCAGAAATTGGCCGAGAGACTAAGTGAAAGTGAGCAACGCCGCAAATTTTACCTGGAACAGATACGAGAGAGAGCTTCTATGGATTTCAGGGATCAATCTTCACCTTTACTGCGTCGAACTTTAAACAAGGATGTTCAGGGAAGATCATCGTCAATTAACAATGGCGATGATTATCAAGTAAGCAGTTTCTCAGGCTTAGGAAGTTGCACTTTTGCGGAAAGCAATAATACAGCACAACATTCAATGAAGCGGAGAATTAAAAAAATTCGACAGAGACTTATGGCTCTAAAATATGAAGTTTTTGAGCCTCCTGTTGGTGCTGAAAATGCTGGCATTGGATACAGAACAGCACTGGGAACTGCAAGGGCAAAGATTGGGAGATGGCTTCAAGAACTTCAAAGACTCCGACAAGCAAGAAAAGAAGGGGCTGCAAGCATTGGGTTAATAACTGCTGAAATGATCAAGTATTTGGAGGGAAAGGAGCTGGAATTGCAGGCTTCCCGCCAAGCTGGTCTGATTGATTTTATCGCTTCTGCCCTGCCTGCTTCTTATACATCAAAACCTGAAGCCTGCCAGGTGACAATACATCTTTTAAAACTCTTGAGGGTGGTGCTATCTCTGCCTACAAACAGGAGTTATTTTCTTGCACAGAATCTCTTGCCCCCTATCATTCCAATGCTGTCTGCTGCCCTTGAGAGCTACATAAAGATAGCAGTATCCTTGAATCCTTCTGGTAGTGTTAATTTCCCATCTACCAAAACCTCAGTTGAAAATTTTGAATCAATATCTGAGGTGTTGGATGGTTATTTATGGACTGTAACAACAATAGTCAGTCACATAAGTTCTGATGAACGACAGCTCCAAATGAGGGATAGTTTGTTGGAGCTACTGATTGCGTACCAAGTTATTCACCGGCTGCGAGATCTCTTCGCCCTTTATGATCGACCCCAGGTAGAGGGGTCACCATTTCCATCGTCAATTATCTTAAGTATAAATTTGTTGGTTGTTCTAACTTCCAGGTCTGAAACTGATTGTTCTATTGATTGGAAAGAAGTACCTATTGAAACACTGCTTGGAAATGGAAGTGAAGAGGCTAAGATTGCTGAGTGTGATAATTCTGAATGTCTTCCTTCAACTCAGACCTTGGAAGATTTTAGACCTCCGTCATCATTGGTGAATGGTGGTAAATTTGTACATCTCCCAGATGTACCAGAGGATGGACCAGTAGATGAGATGTGTAAGATAAATGAATCTGTGGAGTCAGTATCTGCTGCTAAGAATAGTGAGAAAGAGCAGCCTAATAGTCTGGTTGAAGCAAACAATGATAACACCTTCAAAACAGATGTTCCAGATGAACCCCAGAAGATGCTGAATGAGGATATTATGAAGCCTTTTTCATCAGTGGAGGAAGATAAGCACTTGGTGGATACTGGTGCAGAACATAAGTATGATAACAGTATGAGCTTGCAGCAACCGGTAGCATTTCTTCTTTCAGCTGTATCTGAGACAGGGCTTGTCAGTCTTCCATCTCTGTTGACATCTGTGTTATTACAGGCAAACAATAGATTGTCTTCTGAACAGGCCTCGGATTCCCTCCCATCTAATTTTGAAGATGTAGCAACTGGAGTACTGAAGGTGTTGAACAATTTGGCTCTTTTGGACCTTAAATTCATGCAGAGAATGCTGGCTAGGCCAGACCTAAAAATGGAATTTTTCCATTTGATGAGTTTCCTGCTTTCTCATTGTACCAGCAAGTGGAAAGTAGCTAATGATCAGGTGGGGCTGCTTTTGCTTGAATCTCTTTTGCTCCTTGGTCATTTTGCCCTGTTCCACCTTGGGAATCAAGCTGTCCTTCGTTGGGGAAAGAGTCCTACCATTATCCACAAGGTATGCGATTTGCCATTTGTATTCTTCAGTGATCCTGAGTTGATGCCAGTCTTGGCTGGCACGCTGGTTGCTGCCTGTTATGGGTGTGAGCAGAACAAGGGTGTGGTTCAGCAGGAAATGAGTACAGATATGCTACTCTCCCTGTTACAATCTTGCAGAAATGTCTTGCCAGCAGTTAGATCCAATTCTAAGTTGGACAGTGGGCCAGCAGATGACGTGCCCCTAAGATCCGGCCGTAACAGTACCAAGAACTCTAGGGTTTCTTCCGGAAAGGGTGTTGCTTCAGGAAACAGCATGAGAATTGGCAAGATGAGAAGCCATAGGGAAAGTAAAACAATTAGGAGTTATGAAGAGTTGGCTCTGAAGCAGATTCTTCCATCTACAGAAACTGCCTCTATGATGCTGCATTGTAGATTTCCGAATAGCTTCATCGATAGAGCAGAAAATTTCTTTTCAACTGAGAACCCCAGCATCGCTGGAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SCAPER_N

Protein Analysis

1689

Amino Acids

188.39

Weight (kDa)

6.88

Isoelectric Point (pI)

55.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAPER_N PF16501 362 - 462 5.6e-16 S phase cyclin A-associated protein in the endoplasmic reticulum
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1864
Acc36I ACCTGC 1 cut(s) 1540
AccB1I GGYRCC 3 cut(s) 488, 1285, 1309
AccB7I CCANNNNNTGG 3 cut(s) 2701, 3911, 4449
AccBSI CCGCTC 1 cut(s) 2503
AccIII TCCGGA 1 cut(s) 4847
AciI CCGC 8 cut(s) 611, 1383, 2503, 2554, 2734, 2909, 2944, 3196
AclI AACGTT 1 cut(s) 480
AcoI YGGCCR 2 cut(s) 2703, 4813
AcuI CTGAAG 8 cut(s) 426, 1806, 2126, 3279, 4346, 4591, 4848, 4964
AcvI CACGTG 1 cut(s) 2615
AdeI CACNNNGTG 1 cut(s) 4117
AflII CTTAAG 2 cut(s) 1487, 3679
AgeI ACCGGT 1 cut(s) 4168
AhlI ACTAGT 1 cut(s) 2093
AjiI CACGTC 1 cut(s) 4798
AjnI CCWGG 5 cut(s) 2014, 2745, 3267, 3642, 3710
AjuI GAANNNNNNNTTGG 2 cut(s) 3750, 3782
AloI GAACNNNNNNTCC 2 cut(s) 3537, 3569
Alw21I GWGCWC 2 cut(s) 2047, 2176
Alw26I GTCTC 7 cut(s) 90, 1693, 2076, 2289, 2704, 2962, 4193
Alw44I GTGCAC 1 cut(s) 2043
AlwNI CAGNNNCTG 4 cut(s) 608, 806, 3962, 4970
Ama87I CYCGRG 1 cut(s) 1998
Aor13HI TCCGGA 1 cut(s) 4847
ApaLI GTGCAC 1 cut(s) 2043
AsiGI ACCGGT 1 cut(s) 4168
Asp700I GAANNNNTTC 5 cut(s) 411, 2442, 2637, 3819, 5006
AspA2I CCTAGG 1 cut(s) 1736
AspLEI GCGC 2 cut(s) 186, 2403
AspS9I GGNCC 7 cut(s) 923, 1483, 2625, 2692, 3914, 4354, 4784
AsuC2I CCSGG 1 cut(s) 1142
AsuII TTCGAA 1 cut(s) 48
AsuNHI GCTAGC 2 cut(s) 824, 1448
AvaI CYCGRG 1 cut(s) 1998
AvaII GGWCC 3 cut(s) 923, 3914, 4354
AvrII CCTAGG 1 cut(s) 1736
BaeGI GKGCMC 5 cut(s) 1063, 1288, 1314, 2047, 4803
BanI GGYRCC 3 cut(s) 488, 1285, 1309
BanII GRGCYC 1 cut(s) 2176
BarI GAAGNNNNNNTAC 2 cut(s) 4164, 4196
BbrPI CACGTG 1 cut(s) 2615
BbsI GAAGAC 4 cut(s) 1986, 3812, 4208, 4257
Bbv12I GWGCWC 2 cut(s) 2047, 2176
BceAI ACGGC 2 cut(s) 654, 4800
BcgI CGANNNNNNTGC 2 cut(s) 1098, 1132
BciT130I CCWGG 5 cut(s) 2016, 2747, 3269, 3644, 3712
BciVI GTATCC 3 cut(s) 3026, 3421, 4114
BclI TGATCA 2 cut(s) 3153, 4465
BcnI CCSGG 1 cut(s) 1142
BcoDI GTCTC 7 cut(s) 90, 1693, 2076, 2289, 2704, 2962, 4193
BcuI ACTAGT 1 cut(s) 2093
BfmI CTRYAG 2 cut(s) 89, 4962
BfrI CTTAAG 2 cut(s) 1487, 3679
BfuAI ACCTGC 1 cut(s) 1540
BfuI GTATCC 3 cut(s) 3026, 3421, 4114
BglII AGATCT 3 cut(s) 373, 1603, 3616
BlnI CCTAGG 1 cut(s) 1736
BmcAI AGTACT 1 cut(s) 4323
Bme1390I CCNGG 6 cut(s) 1142, 2016, 2747, 3269, 3644, 3712
Bme18I GGWCC 3 cut(s) 923, 3914, 4354
BmeT110I CYCGRG 1 cut(s) 1998
BmgBI CACGTC 1 cut(s) 4798
BmgT120I GGNCC 7 cut(s) 923, 1483, 2625, 2692, 3914, 4354, 4784
BmiI GGNNCC 5 cut(s) 490, 720, 925, 1287, 1311
BmrFI CCNGG 6 cut(s) 1142, 2016, 2747, 3269, 3644, 3712
BmrI ACTGGG 1 cut(s) 3056
BmtI GCTAGC 2 cut(s) 828, 1452
BmuI ACTGGG 1 cut(s) 3056
BoxI GACNNNNGTC 1 cut(s) 3856
BpiI GAAGAC 4 cut(s) 1986, 3812, 4208, 4257
BplI GAGNNNNNCTC 2 cut(s) 1214, 1246
BpmI CTGGAG 1 cut(s) 4338
Bpu10I CCTNAGC 1 cut(s) 2890
Bpu14I TTCGAA 1 cut(s) 48
BpuEI CTTGAG 5 cut(s) 1436, 2041, 2556, 3316, 3407
BpuMI CCSGG 1 cut(s) 1142
Bsa29I ATCGAT 1 cut(s) 5013
BsaAI YACGTR 1 cut(s) 2615
BsaBI GATNNNNATC 3 cut(s) 522, 657, 2865
BsaWI WCCGGW 2 cut(s) 4168, 4847
BsaXI ACNNNNNCTCC 4 cut(s) 2017, 2047, 3537, 3567
Bse118I RCCGGY 2 cut(s) 3606, 4168
Bse1I ACTGG 5 cut(s) 3051, 3917, 4129, 4321, 4628
Bse3DI GCAATG 1 cut(s) 317
Bse8I GATNNNNATC 3 cut(s) 522, 657, 2865
BseAI TCCGGA 1 cut(s) 4847
BseBI CCWGG 5 cut(s) 2016, 2747, 3269, 3644, 3712
BseCI ATCGAT 1 cut(s) 5013
BseGI GGATG 8 cut(s) 47, 457, 619, 1156, 1942, 2830, 3499, 3916
BseJI GATNNNNATC 3 cut(s) 522, 657, 2865
BseMI GCAATG 1 cut(s) 317
BseNI ACTGG 5 cut(s) 3051, 3917, 4129, 4321, 4628
BseRI GAGGAG 6 cut(s) 731, 2038, 2443, 2600, 2603, 2690
BseSI GKGCMC 5 cut(s) 1063, 1288, 1314, 2047, 4803
BseX3I CGGCCG 1 cut(s) 4813
BseYI CCCAGC 3 cut(s) 192, 2667, 5048
BsgI GTGCAG 4 cut(s) 1026, 1479, 2628, 4149
Bsh1285I CGRYCG 1 cut(s) 4816
BshNI GGYRCC 3 cut(s) 488, 1285, 1309
BshTI ACCGGT 1 cut(s) 4168
BshVI ATCGAT 1 cut(s) 5013
BsiEI CGRYCG 1 cut(s) 4816
BsiHKAI GWGCWC 2 cut(s) 2047, 2176
BsiHKCI CYCGRG 1 cut(s) 1998
BsiSI CCGG 5 cut(s) 1141, 3607, 4169, 4812, 4848
BslFI GGGAC 1 cut(s) 865
BsmAI GTCTC 7 cut(s) 90, 1693, 2076, 2289, 2704, 2962, 4193
BsmFI GGGAC 1 cut(s) 865
BsmI GAATGC 3 cut(s) 127, 2262, 4380
BsoBI CYCGRG 1 cut(s) 1998
Bsp119I TTCGAA 1 cut(s) 48
Bsp1286I GDGCHC 6 cut(s) 1063, 1288, 1314, 2047, 2176, 4803
Bsp13I TCCGGA 1 cut(s) 4847
Bsp1407I TGTACA 2 cut(s) 223, 3886
Bsp19I CCATGG 2 cut(s) 1922, 1932
BspACI CCGC 8 cut(s) 611, 1383, 2503, 2554, 2734, 2909, 2944, 3196
BspDI ATCGAT 1 cut(s) 5013
BspEI TCCGGA 1 cut(s) 4847
BspHI TCATGA 2 cut(s) 1620, 2413
BspLI GGNNCC 5 cut(s) 490, 720, 925, 1287, 1311
BspMI ACCTGC 1 cut(s) 1540
BspOI GCTAGC 2 cut(s) 828, 1452
BspT104I TTCGAA 1 cut(s) 48
BspT107I GGYRCC 3 cut(s) 488, 1285, 1309
BspTI CTTAAG 2 cut(s) 1487, 3679
BsrBI CCGCTC 1 cut(s) 2503
BsrDI GCAATG 1 cut(s) 317
BsrFI RCCGGY 2 cut(s) 3606, 4168
BsrGI TGTACA 2 cut(s) 223, 3886
BsrI ACTGG 5 cut(s) 3051, 3917, 4129, 4321, 4628
BssAI RCCGGY 2 cut(s) 3606, 4168
BssT1I CCWWGG 8 cut(s) 232, 1063, 1736, 1922, 1932, 3837, 4504, 4528
Bst2UI CCWGG 5 cut(s) 2016, 2747, 3269, 3644, 3712
Bst4CI ACNGT 9 cut(s) 164, 597, 856, 1776, 1821, 3511, 4151, 4781, 4823
BstAFI CTTAAG 2 cut(s) 1487, 3679
BstAPI GCANNNNNTGC 3 cut(s) 608, 2606, 4375
BstAUI TGTACA 2 cut(s) 223, 3886
BstBAI YACGTR 1 cut(s) 2615
BstBI TTCGAA 1 cut(s) 48
BstDSI CCRYGG 2 cut(s) 1922, 1932
BstEII GGTNACC 1 cut(s) 3654
BstF5I GGATG 8 cut(s) 47, 457, 619, 1156, 1942, 2830, 3499, 3916
BstHHI GCGC 2 cut(s) 186, 2403
BstMAI GTCTC 7 cut(s) 90, 1693, 2076, 2289, 2704, 2962, 4193
BstMCI CGRYCG 1 cut(s) 4816
BstNI CCWGG 5 cut(s) 2016, 2747, 3269, 3644, 3712
BstNSI RCATGY 3 cut(s) 1349, 2132, 2264
BstPAI GACNNNNGTC 1 cut(s) 3856
BstPI GGTNACC 1 cut(s) 3654
BstSCI CCNGG 6 cut(s) 1140, 2014, 2745, 3267, 3642, 3710
BstSFI CTRYAG 2 cut(s) 89, 4962
BstSLI GKGCMC 5 cut(s) 1063, 1288, 1314, 2047, 4803
BstV2I GAAGAC 4 cut(s) 1986, 3812, 4208, 4257
BstXI CCANNNNNNTGG 1 cut(s) 239
BstZI CGGCCG 1 cut(s) 4813
Bsu15I ATCGAT 1 cut(s) 5013
BsuI GTATCC 3 cut(s) 3026, 3421, 4114
BsuTUI ATCGAT 1 cut(s) 5013
BtgI CCRYGG 2 cut(s) 1922, 1932
BtgZI GCGATG 3 cut(s) 1197, 2874, 5038
BtrI CACGTC 1 cut(s) 4798
BtsCI GGATG 8 cut(s) 47, 457, 619, 1156, 1942, 2830, 3499, 3916
BtsI GCAGTG 2 cut(s) 2284, 3761
BtsIMutI CAGTG 7 cut(s) 861, 2284, 3044, 3761, 4101, 4615, 4786
BveI ACCTGC 1 cut(s) 1540
CaiI CAGNNNCTG 4 cut(s) 608, 806, 3962, 4970
CciI TCATGA 2 cut(s) 1620, 2413
CfoI GCGC 2 cut(s) 186, 2403
Cfr10I RCCGGY 2 cut(s) 3606, 4168
Cfr13I GGNCC 7 cut(s) 923, 1483, 2625, 2692, 3914, 4354, 4784
ClaI ATCGAT 1 cut(s) 5013
CseI GACGC 2 cut(s) 2525, 2795
CspAI ACCGGT 1 cut(s) 4168
DraI TTTAAA 2 cut(s) 2817, 3288
DraIII CACNNNGTG 1 cut(s) 4117
DrdI GACNNNNNNGTC 1 cut(s) 1864
DseDI GACNNNNNNGTC 1 cut(s) 1864
EaeI YGGCCR 2 cut(s) 2703, 4813
EagI CGGCCG 1 cut(s) 4813
Ecl136II GAGCTC 1 cut(s) 2174
EclXI CGGCCG 1 cut(s) 4813
Eco130I CCWWGG 8 cut(s) 232, 1063, 1736, 1922, 1932, 3837, 4504, 4528
Eco147I AGGCCT 1 cut(s) 4277
Eco24I GRGCYC 1 cut(s) 2176
Eco47I GGWCC 3 cut(s) 923, 3914, 4354
Eco52I CGGCCG 1 cut(s) 4813
Eco53kI GAGCTC 1 cut(s) 2174
Eco57I CTGAAG 8 cut(s) 426, 1806, 2126, 3279, 4346, 4591, 4848, 4964
Eco72I CACGTG 1 cut(s) 2615
Eco88I CYCGRG 1 cut(s) 1998
Eco91I GGTNACC 1 cut(s) 3654
EcoICRI GAGCTC 1 cut(s) 2174
EcoO109I RGGNCCY 1 cut(s) 923
EcoO65I GGTNACC 1 cut(s) 3654
EcoRI GAATTC 2 cut(s) 1696, 1912
EcoRII CCWGG 5 cut(s) 2014, 2745, 3267, 3642, 3710
EcoT14I CCWWGG 8 cut(s) 232, 1063, 1736, 1922, 1932, 3837, 4504, 4528
EcoT22I ATGCAT 2 cut(s) 1723, 2262
EcoT38I GRGCYC 1 cut(s) 2176
ErhI CCWWGG 8 cut(s) 232, 1063, 1736, 1922, 1932, 3837, 4504, 4528
FalI AAGNNNNNCTT 4 cut(s) 2887, 2919, 4530, 4562
FaqI GGGAC 1 cut(s) 865
FauI CCCGC 1 cut(s) 3203
FbaI TGATCA 2 cut(s) 3153, 4465
FokI GGATG 8 cut(s) 54, 464, 626, 1163, 1949, 2837, 3506, 3923
FriOI GRGCYC 1 cut(s) 2176
GlaI GCGC 2 cut(s) 185, 2402
GsaI CCCAGC 3 cut(s) 196, 2671, 5052
GsuI CTGGAG 1 cut(s) 4338
HapII CCGG 5 cut(s) 1141, 3607, 4169, 4812, 4848
HgaI GACGC 2 cut(s) 2525, 2795
HhaI GCGC 2 cut(s) 186, 2403
Hin6I GCGC 2 cut(s) 184, 2401
HinP1I GCGC 2 cut(s) 184, 2401
HincII GTYRAC 3 cut(s) 1824, 1857, 4230
HindII GTYRAC 3 cut(s) 1824, 1857, 4230
HindIII AAGCTT 2 cut(s) 2180, 2390
HpaII CCGG 5 cut(s) 1141, 3607, 4169, 4812, 4848
Hpy166II GTNNAC 6 cut(s) 1172, 1494, 1824, 1857, 2045, 4230
Hpy8I GTNNAC 6 cut(s) 1172, 1494, 1824, 1857, 2045, 4230
Hpy99I CGWCG 2 cut(s) 136, 2811
HpyCH4III ACNGT 9 cut(s) 164, 597, 856, 1776, 1821, 3511, 4151, 4781, 4823
HpyCH4IV ACGT 3 cut(s) 480, 2614, 4797
HpySE526I ACGT 3 cut(s) 480, 2614, 4797
HspAI GCGC 2 cut(s) 184, 2401
Kpn2I TCCGGA 1 cut(s) 4847
Ksp22I TGATCA 2 cut(s) 3153, 4465
LmnI GCTCC 7 cut(s) 718, 1924, 2590, 3175, 3558, 3577, 4506
MaeII ACGT 3 cut(s) 480, 2614, 4797
MbiI CCGCTC 1 cut(s) 2503
MfeI CAATTG 1 cut(s) 662
MhlI GDGCHC 6 cut(s) 1063, 1288, 1314, 2047, 2176, 4803
MlyI GAGTC 4 cut(s) 2291, 3090, 3962, 4570
MmeI TCCRAC 5 cut(s) 1735, 3124, 3471, 3555, 4755
Mph1103I ATGCAT 2 cut(s) 1723, 2262
MroI TCCGGA 1 cut(s) 4847
MroXI GAANNNNTTC 5 cut(s) 411, 2442, 2637, 3819, 5006
MslI CAYNNNNRTG 4 cut(s) 257, 2133, 3368, 4140
MspA1I CMGCKG 2 cut(s) 2554, 4190
MspCI CTTAAG 2 cut(s) 1487, 3679
MspI CCGG 5 cut(s) 1141, 3607, 4169, 4812, 4848
MspR9I CCNGG 6 cut(s) 1142, 2016, 2747, 3269, 3644, 3712
MunI CAATTG 1 cut(s) 662
Mva1269I GAATGC 3 cut(s) 127, 2262, 4380
MvaI CCWGG 5 cut(s) 2016, 2747, 3269, 3644, 3712
NciI CCSGG 1 cut(s) 1142
NcoI CCATGG 2 cut(s) 1922, 1932
NheI GCTAGC 2 cut(s) 824, 1448
NlaIV GGNNCC 5 cut(s) 490, 720, 925, 1287, 1311
NmeAIII GCCGAG 1 cut(s) 2731
NmuCI GTSAC 6 cut(s) 140, 1073, 1328, 3271, 3527, 3654
NsiI ATGCAT 2 cut(s) 1723, 2262
NspI RCATGY 3 cut(s) 1349, 2132, 2264
NspV TTCGAA 1 cut(s) 48
PaeI GCATGC 2 cut(s) 2132, 2264
PagI TCATGA 2 cut(s) 1620, 2413
PceI AGGCCT 1 cut(s) 4277
PctI GAATGC 3 cut(s) 127, 2262, 4380
PdmI GAANNNNTTC 5 cut(s) 411, 2442, 2637, 3819, 5006
PflMI CCANNNNNTGG 3 cut(s) 2701, 3911, 4449
PinAI ACCGGT 1 cut(s) 4168
PleI GAGTC 4 cut(s) 2290, 3090, 3961, 4569
PmaCI CACGTG 1 cut(s) 2615
PmlI CACGTG 1 cut(s) 2615
PpsI GAGTC 4 cut(s) 2290, 3090, 3961, 4569
Ppu21I YACGTR 1 cut(s) 2615
PpuMI RGGWCCY 1 cut(s) 923
PshAI GACNNNNGTC 1 cut(s) 3856
Psp124BI GAGCTC 1 cut(s) 2176
Psp1406I AACGTT 1 cut(s) 480
Psp5II RGGWCCY 1 cut(s) 923
Psp6I CCWGG 5 cut(s) 2014, 2745, 3267, 3642, 3710
PspCI CACGTG 1 cut(s) 2615
PspEI GGTNACC 1 cut(s) 3654
PspFI CCCAGC 3 cut(s) 192, 2667, 5048
PspGI CCWGG 5 cut(s) 2014, 2745, 3267, 3642, 3710
PspN4I GGNNCC 5 cut(s) 490, 720, 925, 1287, 1311
PspPI GGNCC 7 cut(s) 923, 1483, 2625, 2692, 3914, 4354, 4784
PspPPI RGGWCCY 1 cut(s) 923
PsrI GAACNNNNNNTAC 2 cut(s) 2337, 2369
PstNI CAGNNNCTG 4 cut(s) 608, 806, 3962, 4970
PvuII CAGCTG 1 cut(s) 4190
RseI CAYNNNNRTG 4 cut(s) 257, 2133, 3368, 4140
SacI GAGCTC 1 cut(s) 2176
Sau96I GGNCC 7 cut(s) 923, 1483, 2625, 2692, 3914, 4354, 4784
ScaI AGTACT 1 cut(s) 4323
SchI GAGTC 4 cut(s) 2291, 3090, 3962, 4570
ScrFI CCNGG 6 cut(s) 1142, 2016, 2747, 3269, 3644, 3712
SduI GDGCHC 6 cut(s) 1063, 1288, 1314, 2047, 2176, 4803
SfcI CTRYAG 2 cut(s) 89, 4962
SfuI TTCGAA 1 cut(s) 48
SinI GGWCC 3 cut(s) 923, 3914, 4354
SmiMI CAYNNNNRTG 4 cut(s) 257, 2133, 3368, 4140
SmlI CTYRAG 7 cut(s) 1415, 1487, 2020, 2571, 3295, 3386, 3679
SmoI CTYRAG 7 cut(s) 1415, 1487, 2020, 2571, 3295, 3386, 3679
SpeI ACTAGT 1 cut(s) 2093
SphI GCATGC 2 cut(s) 2132, 2264
SseBI AGGCCT 1 cut(s) 4277
SsiI CCGC 8 cut(s) 611, 1383, 2503, 2554, 2734, 2909, 2944, 3196
SstI GAGCTC 1 cut(s) 2176
StuI AGGCCT 1 cut(s) 4277
StyD4I CCNGG 6 cut(s) 1140, 2014, 2745, 3267, 3642, 3710
StyI CCWWGG 8 cut(s) 232, 1063, 1736, 1922, 1932, 3837, 4504, 4528
TaaI ACNGT 9 cut(s) 164, 597, 856, 1776, 1821, 3511, 4151, 4781, 4823
TaiI ACGT 3 cut(s) 483, 2617, 4800
TaqI TCGA 8 cut(s) 48, 134, 1655, 2287, 2809, 2962, 3637, 5013
TatI WGTACW 5 cut(s) 223, 1491, 3886, 4321, 4703
TauI GCSGC 1 cut(s) 2736
TscAI CASTG 7 cut(s) 861, 2284, 3051, 3768, 4101, 4615, 4786
TseFI GTSAC 6 cut(s) 140, 1073, 1328, 3271, 3527, 3654
Tsp45I GTSAC 6 cut(s) 140, 1073, 1328, 3271, 3527, 3654
TspGWI ACGGA 1 cut(s) 3846
TspRI CASTG 7 cut(s) 861, 2284, 3051, 3768, 4101, 4615, 4786
Van91I CCANNNNNTGG 3 cut(s) 2701, 3911, 4449
Vha464I CTTAAG 2 cut(s) 1487, 3679
VneI GTGCAC 1 cut(s) 2043
VpaK11BI GGWCC 3 cut(s) 923, 3914, 4354
XbaI TCTAGA 5 cut(s) 22, 376, 436, 445, 1724
XceI RCATGY 3 cut(s) 1349, 2132, 2264
XcmI CCANNNNNNNNNTGG 1 cut(s) 4771
XmaJI CCTAGG 1 cut(s) 1736
XmnI GAANNNNTTC 5 cut(s) 411, 2442, 2637, 3819, 5006
ZrmI AGTACT 1 cut(s) 4323
Zsp2I ATGCAT 2 cut(s) 1723, 2262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.