Prupe.5G234300_v2.0.a1

Putative sugar-binding N-terminal domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
17778792 .. 17791526
12735 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G234300.1

Sequence Viewer

Length: 4107 bp
ATGGGGTTCCATGGCGTTGTTGGGTTCGTGGGCTTGGATGACTTGAGCTTGGACTTGGCTTCTTCTCTTATCCGCAGCGGCTACAAAGTCCAAGCTTTCGAGACGTATGAGCCTTTGATAAATGAGTTTCTAAAACTAGGGGGGATTAGATGTGGCAGCCCAAAGGAGGCAGGGAAAGATGTTGCAGCTTTGATTGTGTTAATATCTCAAGAAGATCAAGTTAGTGATGTAACTTTTGGATTGCAGAAGGATACTGTTGTCATGTTTCGTTCAACAATATTACCATCATATACTCAGAATCTGGAGACATATTTCACAGATGATAGTGAGACAGCTTATCTTGTAGATGTGTATGCCACAAAAGGAGTATCTGATGGTTTAAATGGAAAAATCATGATTGCTTCCTCAGGAAGTTCAGATGCCATTTTAAAGGCCCGACCAGTTCTCTCTGCAATGTGTGAAAAGCTTTATGTTTTTGAGGGCGATGTTGGAGCTGGAAGAAAAATTAGGATGGTTAAGGAACTGCTTGAGGGTATTCATCTTGTTGCTTCTTTGGAGGCTATTTCTCTTGGCACTAAAGCTGGTATTCATCCATGGATAATCTATGATATCATATCTAATGCTGCGGGAAACTCATGGATTTTTAAGAACCATATTCCTCAGTTGTTAAGGGGTGCTGCCAAAGATGATTTCAATACTCTTGTTCAAAAGTTGAGGATTATATTGGATCTGGCCAAATCACTTACTTTTCCTCTCCCACTTTTAGCAGTTGCTCATCAACAACTTCTGCTTGGGTCTTCACATTATAACACAGATGATGAAGATGCTGCGTTGATTAAGGTTTGGGAAAAGAAACTTGGAGTGAGAATTTCAGATGCAGCAAATGCTGAGACTTACATCCCTGAGCAATTGGCCAGCCACATTGTTGCCAAATCATATACCATCAACCGAGTTGGCTTCATAGGTCTTGGAGCAATGGGATTTGGAATGGCAACTCACCTTTTAAATTCAAACTTTTCTGTTCTTGGTTATGATGTATATAAACCAACACTAACTCGATTTGCCAGTGCTGGTGGCTTGATTGGAAGCTCTCCAGCAGAAGTATGCAAAGATGTTGATGTGCTGGTAATAATGGTCACAAATGAAGCTCAAGCTGAGAGCGCTTTATATGGGGATTTTGGTGCCATTTCAGCACTTCCATCTGGTGCTTCTATTATCCTTTCATCCACTGTTTCTCCTGGATTTGTTAGCCGACTATATCAGCGCTTGCAAAATGAAGGAAAGAATTTGAAGTTGGTGGATGCTCCTGTTTCTGGTGGGGTTGTGAGAGCCTCCATGGGGACACTTACGATTATGGCGTCTGGTTCAGATGAAGCTCTTAAGAGTACTGGTTCAGTCCTCTCAGCATTAAGTGAGAAGCTTTATGTTATCAAAGGAGGCTGTGGGGCTGGAAGTGGTGTAAAGATGGTAAATCAATTGCTTGCTGGAGTTCATATAGCATCGGGAGCTGAGGCTATGGCATTTGGAGCTCGATTGGGTCTTAATACAAGGATTTTGTTTGATTTCATCACAAATAGTGAGGGATCATCCTGGATGTTTGAAAATCGTGTTCCACACATGCTGGACAATGATTATACTCCGCATTCTGCACTTGATATCTTTGTGAAGGATCTGGGAATTGTTTCTCATGAATGTTCAGTCCGAAAAGTTCCTCTTCATATTTCGACCATTGCCCATCAACTCTTCCTGTCAGGTTCTGCTGCAGGCTGGGGTCGGCAAGATGATGCTGGTGTGGTTAAGGTTTATGAGACACTCACGGGTGTTAAAGTAGAAGGAAAACTTCCGGTTCTTAAGAAAGACTTTATCTTGAAATCCCTCCCAGGTGAGTGGCCAGTAGATCCCATTGGTGAAATACAGAGACTAAATCTGGAAAGTTCAAAGACTTTGGTTGTTCTTGATGATGATCCAACTGGAACTCAAACTGTTCATGATATTGAGGTCTTAACTGAATGGACTGTTGAATCACTAAAGGAGCAGTTCAGAAAAAAACCTAAGTGCTTTTTCATTTTGACCAACTCCAGGTCCTTGAGTTCTGATAAGGCCACGGCATTAATTAAAGACATCTGTAGAAACCTACATGCTGCAACCAAATCAATTGAGAATGCTGATTATACAGTAGTTTTGAGAGGTGATTCGACTTTGCGTGGCCATTTCCCAGAGGAAGCTGATGCCGCTGTTTCAGTATTGGGTGAGATGGATGCATGGATCATCTGCCCCTTTTTTCTTCAAGGAGGGCGTTATACTATTGGAGATATACACTATGTTGCAGATTCTGACCAGCTTATCCCTGCAGCGGATACAGGATTCGCTAAAGATGCTGCTTTTGGCTACAAATCTTCGAATCTTCGAGAGTGGGTTGAGGAGAAAACTGCCGGCCGCATACCAGCCAGCAGTGTTACATCTGTTTCTATCCAACTTCTAAGAAAAGGTGGACCAGATGCTGTTTGTGAGCGTCTTTGCAGTTTGCAAAAGGGATCGACATGCATAGTTAATGCAGCTAGTGACAGAGACATGGCTGTTTTTGCTGCTGGAATGATCAAGGCGGAACTAAGGGGCAAGCGTTTCTTATGCCGAACTGCTGCTAGCTTTGTTTCTGCCAGGATTGGAATTATCCCCAAAGCTCCAATTTTTCCCAAGGATCTTGGAATAAACAAGGAAAGGAATGGTGGTCTCATAGTTGTTGGGTCATATGTTCCAAAAACAACAAAACAGGTTGAAGAGCTTAAATTACAATGCAACCAGATTTTAAGAAGCATTGAGGTTTCGGTTGCTAAAGTTGCCATGAGTTCTACAGAAGAGAGGGAGGAGGAAATCAGTAGAGCAGCTGAGATGGCAGATATTTTTCTTACAGCTCGGAAGGACACTCTAATAATGACCAGTAGGGAGCTCATTACCGGCAAAACTCCCTCTGAGAGTTTGGAAATCAACTTCAAAGTTAGCTCTGCACTGGTGGAAATAGTTAGACGCATATCTACGAAACCACGTTACATACTTGCCAAGGGTGGAATCACATCATCTGACCTTGCTACAAAAGCTCTTGAAGCAAAATGTGCCAAAATAGTGGGACAAGCCCTGGCTGGTGTTCCCTTGTGGCAGCTAGGTCCTGAGAGTAGGCATCTGGGAGTTCCATATATTGTTTTTCCTGGTAATGTTGGTGACAATAGCGCATTGGCGGAGCTAGTGAAATCCTGGGCTCGTCCAGTCAGACTTTCATCAACCAAAGAGCTTCTTCTGAATGCGGAAAAGGGTGGATATGCTGTAGGAGCATTCAATGTTTATAATTTGGAAGGAGTAGAGGCTGTTGTTGCTGCAGCAGAGGAAGAACAAAGCCCAGCTATATTACAGATCCATCCTGGTGCCTTGAAGCAAGGAGGGATCCCGTTGGTCGCATGTTGTATATCTGCTGCTGAACAAGCCAGTGTTCCCATAACTGTACACTTTGACCATGGAACTTCAAAGCAAGATCTGGTGGAAGCTCTTGAGTTGGGATTTGATTCAGTCATGGTGGATGGTTCACATCTTTCCTTCACCGAAAATGTTTCGTACACTAAGTTTGTAGCATTCTTCGCTCACTCAAAAGGTGTGCTAGTAGAAGCTGAACTAGGGAGATTGTCAGGGACAGAAGATGATTTGACTGTTGAAGACTATGAAGCAAGGCTGACTGATGTTAAGCAGGCTCAAGAGTTCATTGATGAAACCGGGATAGACGCTTTGGCAGTGTGTATTGGAAATGTCCATGGAAAATACCCTGCAAGTGGGCCAAATCTGAGGCTTGATTTGCTTAAGGATTTGTATGCCTTGAGTTCGAAGAAAGGAGTGCTCCTAGTGCTTCATGGAGCTTCTGGTTTGCCTAAGGAACTTATCAAGGAATGCATAGAGCATGGTGTGAGAAAGTTCAATGTAAATACAGAGGTGCGAAAAGCTTACATGGATTCCCTTAGCAACTCTAAGAAAGATCTAGTCCACGTTATGGCGTCTGCAAAAGAAGCTATGAAAGCAGTGATTGCAGAGAAGATGCATCTATTTGGTTCTGCAGGAAAGGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1369

Amino Acids

147.18

Weight (kDa)

5.97

Isoelectric Point (pI)

30.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 807, 3339
AccB1I GGYRCC 2 cut(s) 1181, 3416
AccB7I CCANNNNNTGG 1 cut(s) 4030
AcoI YGGCCR 5 cut(s) 732, 912, 1889, 2206, 2434
AcsI RAATTY 3 cut(s) 867, 1006, 1285
AcyI GRCGYC 2 cut(s) 1358, 4034
AfaI GTAC 3 cut(s) 1387, 3495, 3605
AfeI AGCGCT 2 cut(s) 1162, 1265
AfiI CCNNNNNNNGG 7 cut(s) 166, 1313, 1338, 2079, 2353, 3815, 4030
AflII CTTAAG 3 cut(s) 1379, 1850, 3842
AjnI CCWGG 9 cut(s) 1237, 1589, 1879, 2078, 2657, 3132, 3202, 3248, 3412
AjuI GAANNNNNNNTTGG 6 cut(s) 674, 706, 840, 872, 1277, 1309
Alw21I GWGCWC 3 cut(s) 1531, 2949, 3882
Alw26I GTCTC 8 cut(s) 95, 299, 323, 884, 1802, 1912, 2562, 2735
AlwNI CAGNNNCTG 4 cut(s) 301, 1757, 2333, 2501
Aor51HI AGCGCT 2 cut(s) 1162, 1265
AoxI GGCC 8 cut(s) 432, 732, 912, 1889, 2100, 2206, 2434, 3818
ApoI RAATTY 3 cut(s) 867, 1006, 1285
AseI ATTAAT 1 cut(s) 2111
Asp700I GAANNNNTTC 1 cut(s) 1681
AspLEI GCGC 3 cut(s) 1163, 1266, 3227
AspS9I GGNCC 5 cut(s) 433, 2082, 2492, 3161, 3818
AsuC2I CCSGG 1 cut(s) 3760
AsuHPI GGTGA 7 cut(s) 989, 1895, 1919, 2201, 2261, 3227, 3580
AsuII TTCGAA 2 cut(s) 2399, 3866
AsuNHI GCTAGC 1 cut(s) 2642
AvaII GGWCC 3 cut(s) 2082, 2492, 3161
AxyI CCTNAGG 2 cut(s) 406, 3912
BaeI ACNNNNGTAYC 2 cut(s) 243, 276
BalI TGGCCA 4 cut(s) 734, 914, 1891, 2208
BamHI GGATCC 1 cut(s) 3435
BanI GGYRCC 2 cut(s) 1181, 3416
BanII GRGCYC 3 cut(s) 1531, 2949, 3256
BbsI GAAGAC 2 cut(s) 789, 3708
Bbv12I GWGCWC 3 cut(s) 1531, 2949, 3882
BbvCI CCTCAGC 1 cut(s) 1509
BceAI ACGGC 1 cut(s) 2121
BciT130I CCWGG 9 cut(s) 1239, 1591, 1881, 2080, 2659, 3134, 3204, 3250, 3414
BciVI GTATCC 2 cut(s) 244, 2350
BclI TGATCA 1 cut(s) 2595
BcnI CCSGG 1 cut(s) 3760
BcoDI GTCTC 8 cut(s) 95, 299, 323, 884, 1802, 1912, 2562, 2735
BfaI CTAG 9 cut(s) 137, 2559, 2643, 3158, 3239, 3647, 3662, 3884, 4019
BfmI CTRYAG 7 cut(s) 1761, 2125, 2349, 2850, 3318, 3369, 4092
BfoI RGCGCY 2 cut(s) 1164, 1267
BfrI CTTAAG 3 cut(s) 1379, 1850, 3842
BfuI GTATCC 2 cut(s) 244, 2350
BglII AGATCT 2 cut(s) 3523, 4015
BmcAI AGTACT 1 cut(s) 1387
Bme18I GGWCC 3 cut(s) 2082, 2492, 3161
BmgT120I GGNCC 5 cut(s) 433, 2082, 2492, 3161, 3818
BmiI GGNNCC 4 cut(s) 8, 1183, 3418, 3437
BmtI GCTAGC 1 cut(s) 2646
BpiI GAAGAC 2 cut(s) 789, 3708
BpmI CTGGAG 4 cut(s) 323, 1077, 1506, 2062
Bpu10I CCTNAGC 3 cut(s) 903, 1509, 3998
Bpu14I TTCGAA 2 cut(s) 2399, 3866
BpuEI CTTGAG 8 cut(s) 64, 192, 548, 1134, 2107, 3560, 3723, 3880
BpuMI CCSGG 1 cut(s) 3760
BsaBI GATNNNNATC 1 cut(s) 1962
BsaHI GRCGYC 2 cut(s) 1358, 4034
BsaI GGTCTC 1 cut(s) 2735
BsaWI WCCGGW 1 cut(s) 1843
BsaXI ACNNNNNCTCC 2 cut(s) 1219, 1249
Bsc4I CCNNNNNNNGG 7 cut(s) 166, 1313, 1338, 2079, 2353, 3815, 4030
Bse118I RCCGGY 2 cut(s) 2432, 2954
Bse1I ACTGG 9 cut(s) 440, 1065, 1393, 1892, 1975, 2937, 3012, 3260, 3477
Bse21I CCTNAGG 2 cut(s) 406, 3912
Bse3DI GCAATG 3 cut(s) 459, 981, 1728
Bse8I GATNNNNATC 1 cut(s) 1962
BseBI CCWGG 9 cut(s) 1239, 1591, 1881, 2080, 2659, 3134, 3204, 3250, 3414
BseJI GATNNNNATC 1 cut(s) 1962
BseLI CCNNNNNNNGG 7 cut(s) 166, 1313, 1338, 2079, 2353, 3815, 4030
BseMI GCAATG 3 cut(s) 459, 981, 1728
BseNI ACTGG 9 cut(s) 440, 1065, 1393, 1892, 1975, 2937, 3012, 3260, 3477
BseRI GAGGAG 2 cut(s) 2435, 2879
BseX3I CGGCCG 1 cut(s) 2434
BseYI CCCAGC 2 cut(s) 1767, 3391
BsgI GTGCAG 2 cut(s) 1632, 2988
Bsh1285I CGRYCG 1 cut(s) 2437
BshFI GGCC 8 cut(s) 434, 734, 914, 1891, 2102, 2208, 2436, 3820
BshNI GGYRCC 2 cut(s) 1181, 3416
BsiEI CGRYCG 1 cut(s) 2437
BsiHKAI GWGCWC 3 cut(s) 1531, 2949, 3882
BsiSI CCGG 4 cut(s) 1844, 2433, 2955, 3759
BslFI GGGAC 3 cut(s) 1354, 3138, 3691
BslI CCNNNNNNNGG 7 cut(s) 166, 1313, 1338, 2079, 2353, 3815, 4030
BsmAI GTCTC 8 cut(s) 95, 299, 323, 884, 1802, 1912, 2562, 2735
BsmBI CGTCTC 1 cut(s) 95
BsmFI GGGAC 3 cut(s) 1354, 3138, 3691
BsmI GAATGC 6 cut(s) 1642, 2167, 3301, 3326, 3620, 3935
BsnI GGCC 8 cut(s) 434, 734, 914, 1891, 2102, 2208, 2436, 3820
Bso31I GGTCTC 1 cut(s) 2735
Bsp119I TTCGAA 2 cut(s) 2399, 3866
Bsp1286I GDGCHC 4 cut(s) 1531, 2949, 3256, 3882
Bsp1407I TGTACA 1 cut(s) 3493
Bsp19I CCATGG 5 cut(s) 10, 593, 1335, 3505, 3796
BspANI GGCC 8 cut(s) 434, 734, 914, 1891, 2102, 2208, 2436, 3820
BspHI TCATGA 3 cut(s) 393, 1687, 1987
BspLI GGNNCC 4 cut(s) 8, 1183, 3418, 3437
BspMAI CTGCAG 4 cut(s) 1765, 2353, 3373, 4096
BspOI GCTAGC 1 cut(s) 2646
BspQI GCTCTTC 1 cut(s) 2772
BspT104I TTCGAA 2 cut(s) 2399, 3866
BspT107I GGYRCC 2 cut(s) 1181, 3416
BspTI CTTAAG 3 cut(s) 1379, 1850, 3842
BspTNI GGTCTC 1 cut(s) 2735
BsrDI GCAATG 3 cut(s) 459, 981, 1728
BsrFI RCCGGY 2 cut(s) 2432, 2954
BsrGI TGTACA 1 cut(s) 3493
BsrI ACTGG 9 cut(s) 440, 1065, 1393, 1892, 1975, 2937, 3012, 3260, 3477
BssAI RCCGGY 2 cut(s) 2432, 2954
BssNI GRCGYC 2 cut(s) 1358, 4034
BssT1I CCWWGG 7 cut(s) 10, 593, 1335, 2694, 3057, 3505, 3796
Bst2UI CCWGG 9 cut(s) 1239, 1591, 1881, 2080, 2659, 3134, 3204, 3250, 3414
Bst4CI ACNGT 7 cut(s) 256, 1231, 1984, 2017, 2176, 3493, 3697
Bst6I CTCTTC 4 cut(s) 1719, 1748, 2772, 2850
BstACI GRCGYC 2 cut(s) 1358, 4034
BstAFI CTTAAG 3 cut(s) 1379, 1850, 3842
BstAPI GCANNNNNTGC 3 cut(s) 884, 3110, 4064
BstAUI TGTACA 1 cut(s) 3493
BstBI TTCGAA 2 cut(s) 2399, 3866
BstC8I GCNNGC 9 cut(s) 916, 1268, 1482, 1765, 2434, 2449, 2618, 2644, 3735
BstDSI CCRYGG 6 cut(s) 10, 593, 1335, 2103, 3505, 3796
BstH2I RGCGCY 2 cut(s) 1164, 1267
BstHHI GCGC 3 cut(s) 1163, 1266, 3227
BstMAI GTCTC 8 cut(s) 95, 299, 323, 884, 1802, 1912, 2562, 2735
BstMCI CGRYCG 1 cut(s) 2437
BstNI CCWGG 9 cut(s) 1239, 1591, 1881, 2080, 2659, 3134, 3204, 3250, 3414
BstNSI RCATGY 4 cut(s) 1621, 2141, 2544, 3453
BstSFI CTRYAG 7 cut(s) 1761, 2125, 2349, 2850, 3318, 3369, 4092
BstV2I GAAGAC 2 cut(s) 789, 3708
BstX2I RGATCY 8 cut(s) 727, 1669, 1897, 2698, 3405, 3435, 3523, 4015
BstXI CCANNNNNNTGG 2 cut(s) 1887, 3121
BstYI RGATCY 8 cut(s) 727, 1669, 1897, 2698, 3405, 3435, 3523, 4015
BstZI CGGCCG 1 cut(s) 2434
Bsu36I CCTNAGG 2 cut(s) 406, 3912
BsuI GTATCC 2 cut(s) 244, 2350
BsuRI GGCC 8 cut(s) 434, 734, 914, 1891, 2102, 2208, 2436, 3820
BtgI CCRYGG 6 cut(s) 10, 593, 1335, 2103, 3505, 3796
BtgZI GCGATG 1 cut(s) 498
BtsI GCAGTG 3 cut(s) 2458, 3783, 4065
BtsIMutI CAGTG 7 cut(s) 1072, 1227, 2458, 3005, 3484, 3783, 4065
Cac8I GCNNGC 9 cut(s) 916, 1268, 1482, 1765, 2434, 2449, 2618, 2644, 3735
CaiI CAGNNNCTG 4 cut(s) 301, 1757, 2333, 2501
CciI TCATGA 3 cut(s) 393, 1687, 1987
CfoI GCGC 3 cut(s) 1163, 1266, 3227
Cfr10I RCCGGY 2 cut(s) 2432, 2954
Cfr13I GGNCC 5 cut(s) 433, 2082, 2492, 3161, 3818
CseI GACGC 5 cut(s) 1347, 2501, 3033, 3776, 4023
Csp6I GTAC 3 cut(s) 1386, 3494, 3604
CviQI GTAC 3 cut(s) 1386, 3494, 3604
DraI TTTAAA 3 cut(s) 381, 429, 1005
EaeI YGGCCR 5 cut(s) 732, 912, 1889, 2206, 2434
EagI CGGCCG 1 cut(s) 2434
Eam1104I CTCTTC 4 cut(s) 1719, 1748, 2772, 2850
EarI CTCTTC 4 cut(s) 1719, 1748, 2772, 2850
EciI GGCGGA 2 cut(s) 2618, 3248
Ecl136II GAGCTC 2 cut(s) 1529, 2947
EclXI CGGCCG 1 cut(s) 2434
Eco130I CCWWGG 7 cut(s) 10, 593, 1335, 2694, 3057, 3505, 3796
Eco24I GRGCYC 3 cut(s) 1531, 2949, 3256
Eco31I GGTCTC 1 cut(s) 2735
Eco32I GATATC 2 cut(s) 610, 1657
Eco47I GGWCC 3 cut(s) 2082, 2492, 3161
Eco47III AGCGCT 2 cut(s) 1162, 1265
Eco52I CGGCCG 1 cut(s) 2434
Eco53kI GAGCTC 2 cut(s) 1529, 2947
Eco81I CCTNAGG 2 cut(s) 406, 3912
EcoICRI GAGCTC 2 cut(s) 1529, 2947
EcoO109I RGGNCCY 2 cut(s) 2082, 3161
EcoRII CCWGG 9 cut(s) 1237, 1589, 1879, 2078, 2657, 3132, 3202, 3248, 3412
EcoRV GATATC 2 cut(s) 610, 1657
EcoT14I CCWWGG 7 cut(s) 10, 593, 1335, 2694, 3057, 3505, 3796
EcoT22I ATGCAT 4 cut(s) 2263, 2546, 3935, 4080
EcoT38I GRGCYC 3 cut(s) 1531, 2949, 3256
ErhI CCWWGG 7 cut(s) 10, 593, 1335, 2694, 3057, 3505, 3796
Esp3I CGTCTC 1 cut(s) 95
FaqI GGGAC 3 cut(s) 1354, 3138, 3691
FauI CCCGC 1 cut(s) 619
FauNDI CATATG 1 cut(s) 2749
FbaI TGATCA 1 cut(s) 2595
FriOI GRGCYC 3 cut(s) 1531, 2949, 3256
FspBI CTAG 9 cut(s) 137, 2559, 2643, 3158, 3239, 3647, 3662, 3884, 4019
GlaI GCGC 3 cut(s) 1162, 1265, 3226
GsaI CCCAGC 2 cut(s) 1771, 3395
GsuI CTGGAG 4 cut(s) 323, 1077, 1506, 2062
HaeII RGCGCY 2 cut(s) 1164, 1267
HaeIII GGCC 8 cut(s) 434, 734, 914, 1891, 2102, 2208, 2436, 3820
HapII CCGG 4 cut(s) 1844, 2433, 2955, 3759
HgaI GACGC 5 cut(s) 1347, 2501, 3033, 3776, 4023
HhaI GCGC 3 cut(s) 1163, 1266, 3227
Hin1I GRCGYC 2 cut(s) 1358, 4034
Hin6I GCGC 3 cut(s) 1161, 1264, 3225
HinP1I GCGC 3 cut(s) 1161, 1264, 3225
HindIII AAGCTT 4 cut(s) 93, 464, 1418, 3981
HinfI GANTC 9 cut(s) 298, 2021, 2192, 2330, 2364, 2401, 3066, 3554, 3992
HpaII CCGG 4 cut(s) 1844, 2433, 2955, 3759
HphI GGTGA 7 cut(s) 989, 1895, 1919, 2201, 2261, 3227, 3580
Hpy166II GTNNAC 5 cut(s) 2492, 3496, 3575, 3606, 4024
Hpy8I GTNNAC 5 cut(s) 2492, 3496, 3575, 3606, 4024
HpyAV CCTTC 7 cut(s) 241, 1271, 1660, 1826, 2911, 3341, 3595
HpyCH4III ACNGT 7 cut(s) 256, 1231, 1984, 2017, 2176, 3493, 3697
HpyCH4IV ACGT 3 cut(s) 104, 3043, 4026
HpySE526I ACGT 3 cut(s) 104, 3043, 4026
Hsp92I GRCGYC 2 cut(s) 1358, 4034
HspAI GCGC 3 cut(s) 1161, 1264, 3225
KroI GCCGGC 1 cut(s) 2432
KroNI GCCGGC 1 cut(s) 2434
Ksp22I TGATCA 1 cut(s) 2595
LguI GCTCTTC 1 cut(s) 2772
MaeI CTAG 9 cut(s) 137, 2559, 2643, 3158, 3239, 3647, 3662, 3884, 4019
MaeII ACGT 3 cut(s) 104, 3043, 4026
MaeIII GTNAC 6 cut(s) 229, 1135, 2455, 2561, 3044, 3215
MfeI CAATTG 3 cut(s) 908, 1475, 2154
MflI RGATCY 8 cut(s) 727, 1669, 1897, 2698, 3405, 3435, 3523, 4015
MhlI GDGCHC 4 cut(s) 1531, 2949, 3256, 3882
MlsI TGGCCA 4 cut(s) 734, 914, 1891, 2208
MluNI TGGCCA 4 cut(s) 734, 914, 1891, 2208
MmeI TCCRAC 3 cut(s) 469, 1991, 2497
Mox20I TGGCCA 4 cut(s) 734, 914, 1891, 2208
Mph1103I ATGCAT 4 cut(s) 2263, 2546, 3935, 4080
MroNI GCCGGC 1 cut(s) 2432
MroXI GAANNNNTTC 1 cut(s) 1681
MscI TGGCCA 4 cut(s) 734, 914, 1891, 2208
MslI CAYNNNNRTG 1 cut(s) 3414
Msp20I TGGCCA 4 cut(s) 734, 914, 1891, 2208
MspA1I CMGCKG 4 cut(s) 78, 2234, 2354, 2885
MspCI CTTAAG 3 cut(s) 1379, 1850, 3842
MspI CCGG 4 cut(s) 1844, 2433, 2955, 3759
MunI CAATTG 3 cut(s) 908, 1475, 2154
Mva1269I GAATGC 6 cut(s) 1642, 2167, 3301, 3326, 3620, 3935
MvaI CCWGG 9 cut(s) 1239, 1591, 1881, 2080, 2659, 3134, 3204, 3250, 3414
NaeI GCCGGC 1 cut(s) 2434
NciI CCSGG 1 cut(s) 3760
NcoI CCATGG 5 cut(s) 10, 593, 1335, 3505, 3796
NdeI CATATG 1 cut(s) 2749
NgoMIV GCCGGC 1 cut(s) 2432
NheI GCTAGC 1 cut(s) 2642
NlaIV GGNNCC 4 cut(s) 8, 1183, 3418, 3437
NmuCI GTSAC 3 cut(s) 1135, 2561, 3215
NsiI ATGCAT 4 cut(s) 2263, 2546, 3935, 4080
NspI RCATGY 4 cut(s) 1621, 2141, 2544, 3453
NspV TTCGAA 2 cut(s) 2399, 3866
PacI TTAATTAA 1 cut(s) 2115
PagI TCATGA 3 cut(s) 393, 1687, 1987
PciSI GCTCTTC 1 cut(s) 2772
PcsI WCGNNNNNNNCGW 1 cut(s) 1355
PctI GAATGC 6 cut(s) 1642, 2167, 3301, 3326, 3620, 3935
PdiI GCCGGC 1 cut(s) 2434
PdmI GAANNNNTTC 1 cut(s) 1681
PfeI GAWTC 9 cut(s) 298, 2021, 2192, 2330, 2364, 2401, 3066, 3554, 3992
PflMI CCANNNNNTGG 1 cut(s) 4030
PfoI TCCNGGA 2 cut(s) 1237, 1589
PpuMI RGGWCCY 2 cut(s) 2082, 3161
PshBI ATTAAT 1 cut(s) 2111
PsiI TTATAA 2 cut(s) 807, 3339
Psp124BI GAGCTC 2 cut(s) 1531, 2949
Psp5II RGGWCCY 2 cut(s) 2082, 3161
Psp6I CCWGG 9 cut(s) 1237, 1589, 1879, 2078, 2657, 3132, 3202, 3248, 3412
PspFI CCCAGC 2 cut(s) 1767, 3391
PspGI CCWGG 9 cut(s) 1237, 1589, 1879, 2078, 2657, 3132, 3202, 3248, 3412
PspN4I GGNNCC 4 cut(s) 8, 1183, 3418, 3437
PspPI GGNCC 5 cut(s) 433, 2082, 2492, 3161, 3818
PspPPI RGGWCCY 2 cut(s) 2082, 3161
PstI CTGCAG 4 cut(s) 1765, 2353, 3373, 4096
PstNI CAGNNNCTG 4 cut(s) 301, 1757, 2333, 2501
PsuI RGATCY 8 cut(s) 727, 1669, 1897, 2698, 3405, 3435, 3523, 4015
PvuII CAGCTG 1 cut(s) 2885
RsaI GTAC 3 cut(s) 1387, 3495, 3605
RsaNI GTAC 3 cut(s) 1386, 3494, 3604
RseI CAYNNNNRTG 1 cut(s) 3414
SacI GAGCTC 2 cut(s) 1531, 2949
SapI GCTCTTC 1 cut(s) 2772
Sau96I GGNCC 5 cut(s) 433, 2082, 2492, 3161, 3818
ScaI AGTACT 1 cut(s) 1387
SduI GDGCHC 4 cut(s) 1531, 2949, 3256, 3882
SfcI CTRYAG 7 cut(s) 1761, 2125, 2349, 2850, 3318, 3369, 4092
SfuI TTCGAA 2 cut(s) 2399, 3866
SinI GGWCC 3 cut(s) 2082, 2492, 3161
SmiMI CAYNNNNRTG 1 cut(s) 3414
SspI AATATT 1 cut(s) 279
SspMI CTAG 9 cut(s) 137, 2559, 2643, 3158, 3239, 3647, 3662, 3884, 4019
SstI GAGCTC 2 cut(s) 1531, 2949
StyI CCWWGG 7 cut(s) 10, 593, 1335, 2694, 3057, 3505, 3796
TaaI ACNGT 7 cut(s) 256, 1231, 1984, 2017, 2176, 3493, 3697
TaiI ACGT 3 cut(s) 107, 3046, 4029
TaqI TCGA 9 cut(s) 99, 1057, 1531, 1724, 2195, 2399, 2407, 2537, 3866
TatI WGTACW 2 cut(s) 1385, 3493
TauI GCSGC 3 cut(s) 81, 2234, 2439
TfiI GAWTC 9 cut(s) 298, 2021, 2192, 2330, 2364, 2401, 3066, 3554, 3992
TscAI CASTG 7 cut(s) 1072, 1234, 2458, 3012, 3484, 3783, 4065
TseFI GTSAC 3 cut(s) 1135, 2561, 3215
Tsp45I GTSAC 3 cut(s) 1135, 2561, 3215
TspRI CASTG 7 cut(s) 1072, 1234, 2458, 3012, 3484, 3783, 4065
Van91I CCANNNNNTGG 1 cut(s) 4030
Vha464I CTTAAG 3 cut(s) 1379, 1850, 3842
VpaK11BI GGWCC 3 cut(s) 2082, 2492, 3161
VspI ATTAAT 1 cut(s) 2111
XapI RAATTY 3 cut(s) 867, 1006, 1285
XceI RCATGY 4 cut(s) 1621, 2141, 2544, 3453
XcmI CCANNNNNNNNNTGG 1 cut(s) 17
XmnI GAANNNNTTC 1 cut(s) 1681
XspI CTAG 9 cut(s) 137, 2559, 2643, 3158, 3239, 3647, 3662, 3884, 4019
ZrmI AGTACT 1 cut(s) 1387
Zsp2I ATGCAT 4 cut(s) 2263, 2546, 3935, 4080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.