Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0014315

Physical Location & Seq

Genomic Coordinates Reverse (-)

4370782 .. 4376463

Gene Structure 5682 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G063500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGTCGGTGCAAGACTATTTGGATAACCACATGCTCTCTCGGAAAATCGAAGACGCCGTCAATGCCGCCGTTAGGGCTAAGGCCCCCGATCCCGTCCTCTATATCTCGAATCATATGAGGAAAGCGATTCCGTCAGTGATAACGAAGGTCAAAGCTCGGCAGATCCTCGATAGCAGAGGAATTCCAACTGTTGAAGTGGACCTCCACACTAACAAAGGAATGTTTCGTGCTTCTGCTCCTAGTTCTGATCTTTCAGGAATGTATGAGGCTGTTGAATTGCGAGATGGGGACAAGGGATCGTATCTTGGAAATAGTGTGATTAGAGCTGTTAAGAATGTGAATGAGAAAATATCCGAAGCATTGGTAGGCATGGATCCTACGCTTCAGTCTCAGATTGATCAGGCAATGATAGAACTGGATAGAACAGAAAAGAAGGGTGAACTTGGAGTAAATGCCATACTAGCTGTGTCAATTGCTGCTTGCAAAGCTGGAGCTGCTCAAAAAGAGGTGCCACTGTACAAACATATTGCCGACCTTTCCGGAAAATCACAACTGACCCTGCCTGTCCCTGCTTTCACTGTTATAAGTGGGGGAAAGCGTGCTGGGAATAATCTGGCCATTCAGGAAATTATGGTTCTCCCAATTGGAGCTAACAGGTTTGAGGAGGCATTGCAAATGGGATCGGAAACCTATCATCACTTGAAGGCTGTTATTACAGAAAAATATGGCGCACATGGATGTAATGTTGGAGAAGATGGTGGTTTTGCTCCAAACATCTCCAGCATTAAAGAAGTCTTGGATCTTGTAAAAGAGGCGATCAGCAGAACAGGTTATAATGAGCAAATAAAACTAGCAATTGATGTTGCTGCTACTGACTTTTGCATAGGTACAAAGTATGACCTGGACTACAAATCAGCCAATAAGTCGGGACAAAATTTCAAGTCAGGCCAAGATATGACTGAGATGTATAAAGAACTTTGTAATGAGTACCCAATTGTTTCAATTGAAGACCCATTTGATAAGGAGGACTGGGAACACACCAAAAAGTTTTCTGGTCTTGGAATTTGTCAGGTAGTTGGAGATGACTTGATAATGTCGAATCCAAAACGTATTAAGAGAGCAATAGAGGAGTCCACTTGTAATGCTCTTCTTGTAAAGATAAACCAGATTGGGACGGTTACCGAGGCCATTGAAGTGGTGAAGTTGGCCAAGGATGCGCACTGGGGAGTGGTGACATCCCACAGATGTGGTGAAACTGAAGATTCCTTCATAGCAGACTTATCTGTTGGTCTGTCAACAGGTCAGATCAAAGCTGGTGCTCCTTGCAGAGGCGAGCGGCTGGCTAAGTATAACCAGTTGCTTCGAATTGAGGAAGAACTTGGGGACAACGCATTTTATGCTGGTGAAGACTGGAGGGAATCACCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko03018 ko04066 map00010 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map03018 map04066

Pfam Domains

Protein Families

Enolase_C Enolase_N

Protein Analysis

476

Amino Acids

51.87

Weight (kDa)

5.47

Isoelectric Point (pI)

39.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014315)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29560
fragaria_vesca	FvH4_3g37690
malus_domestica	MD03G1078500.v1.1
prunus_persica	Prupe.6G063500_v2.0.a1
pyrus_communis	pycom03g06290 pycom11g07120
rosa_chinensis	RchiOBHm_Chr5g0067961
rosa_laevigata	RLG00000035947
rosa_roxburghii	Rroxscaffold_1G00012640 Rroxscaffold_1G00013350
rosa_rugosa	Rorug05G0386800
rosa_samantha	Rh5AG445700 Rh5BG463200 Rh5CG485100 Rh5DG477200
rosa_wichuraiana	Rw0G015360 Rw5G041620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	584, 834
Acc16I	TGCGCA	1 cut(s)	1218
AccB1I	GGYRCC	1 cut(s)	508
AccBSI	CCGCTC	1 cut(s)	1336
AccIII	TCCGGA	1 cut(s)	539
AciI	CCGC	2 cut(s)	66, 1336
AclWI	GGATC	7 cut(s)	83, 157, 304, 368, 381, 688, 807
AcoI	YGGCCR	2 cut(s)	615, 1206
AcsI	RAATTY	3 cut(s)	180, 934, 1062
AcuI	CTGAAG	2 cut(s)	368, 1278
AcyI	GRCGYC	1 cut(s)	54
AfaI	GTAC	3 cut(s)	518, 889, 989
AfiI	CCNNNNNNNGG	2 cut(s)	72, 1328
AgsI	TTSAA	7 cut(s)	194, 275, 703, 940, 1002, 1007, 1193
AjnI	CCWGG	1 cut(s)	900
AleI	CACNNNNGTG	1 cut(s)	1245
AluBI	AGCT	7 cut(s)	155, 326, 464, 488, 494, 650, 1313
AluI	AGCT	7 cut(s)	155, 326, 464, 488, 494, 650, 1313
Alw21I	GWGCWC	1 cut(s)	1321
Alw26I	GTCTC	1 cut(s)	393
AlwI	GGATC	7 cut(s)	83, 157, 304, 368, 381, 688, 807
Aor13HI	TCCGGA	1 cut(s)	539
AoxI	GGCC	5 cut(s)	81, 615, 946, 1185, 1206
ApeKI	GCWGC	3 cut(s)	476, 494, 866
ApoI	RAATTY	3 cut(s)	180, 934, 1062
ArsI	GACNNNNNNTTYG	2 cut(s)	42, 74
AspLEI	GCGC	2 cut(s)	731, 1219
AspS9I	GGNCC	2 cut(s)	82, 199
AsuHPI	GGTGA	6 cut(s)	449, 1210, 1243, 1262, 1413, 1415
AsuII	TTCGAA	1 cut(s)	1363
AvaII	GGWCC	1 cut(s)	199
BalI	TGGCCA	2 cut(s)	617, 1208
BamHI	GGATCC	1 cut(s)	373
BanI	GGYRCC	1 cut(s)	508
BbsI	GAAGAC	3 cut(s)	57, 1014, 1413
Bbv12I	GWGCWC	1 cut(s)	1321
BbvI	GCAGC	3 cut(s)	463, 481, 853
BccI	CCATC	2 cut(s)	278, 749
BceAI	ACGGC	2 cut(s)	41, 53
BciT130I	CCWGG	1 cut(s)	902
BclI	TGATCA	1 cut(s)	397
BcoDI	GTCTC	1 cut(s)	393
BfaI	CTAG	3 cut(s)	240, 461, 851
BglI	GCCNNNNNGGC	1 cut(s)	74
BisI	GCNGC	5 cut(s)	66, 477, 495, 867, 1337
BlsI	GCNGC	5 cut(s)	67, 478, 496, 868, 1338
Bme1390I	CCNGG	1 cut(s)	902
Bme18I	GGWCC	1 cut(s)	199
BmgT120I	GGNCC	2 cut(s)	82, 199
BmiI	GGNNCC	3 cut(s)	84, 375, 510
BmrFI	CCNGG	1 cut(s)	902
BmrI	ACTGGG	2 cut(s)	1039, 1231
BmsI	GCATC	1 cut(s)	1204
BmuI	ACTGGG	2 cut(s)	1039, 1231
BpiI	GAAGAC	3 cut(s)	57, 1014, 1413
BpmI	CTGGAG	2 cut(s)	510, 763
Bpu10I	CCTNAGC	1 cut(s)	78
Bpu14I	TTCGAA	1 cut(s)	1363
BsaHI	GRCGYC	1 cut(s)	54
BsaJI	CCNNGG	2 cut(s)	1182, 1209
BsaWI	WCCGGW	1 cut(s)	539
Bsc4I	CCNNNNNNNGG	2 cut(s)	72, 1328
Bse1I	ACTGG	5 cut(s)	420, 1034, 1226, 1354, 1415
Bse3DI	GCAATG	2 cut(s)	411, 668
BseAI	TCCGGA	1 cut(s)	539
BseBI	CCWGG	1 cut(s)	902
BseDI	CCNNGG	2 cut(s)	1182, 1209
BseGI	GGATG	3 cut(s)	743, 1219, 1235
BseLI	CCNNNNNNNGG	2 cut(s)	72, 1328
BseMI	GCAATG	2 cut(s)	411, 668
BseMII	CTCAG	2 cut(s)	404, 951
BseNI	ACTGG	5 cut(s)	420, 1034, 1226, 1354, 1415
BseRI	GAGGAG	2 cut(s)	677, 1142
BseXI	GCAGC	3 cut(s)	463, 481, 853
BseYI	CCCAGC	1 cut(s)	602
BshFI	GGCC	5 cut(s)	83, 617, 948, 1187, 1208
BshNI	GGYRCC	1 cut(s)	508
BsiHKAI	GWGCWC	1 cut(s)	1321
BsiSI	CCGG	1 cut(s)	540
BslFI	GGGAC	5 cut(s)	302, 551, 942, 1186, 1397
BslI	CCNNNNNNNGG	2 cut(s)	72, 1328
BsmAI	GTCTC	1 cut(s)	393
BsmFI	GGGAC	5 cut(s)	302, 551, 942, 1186, 1397
BsnI	GGCC	5 cut(s)	83, 617, 948, 1187, 1208
Bsp119I	TTCGAA	1 cut(s)	1363
Bsp1286I	GDGCHC	1 cut(s)	1321
Bsp13I	TCCGGA	1 cut(s)	539
Bsp1407I	TGTACA	1 cut(s)	516
BspACI	CCGC	2 cut(s)	66, 1336
BspANI	GGCC	5 cut(s)	83, 617, 948, 1187, 1208
BspCNI	CTCAG	2 cut(s)	403, 952
BspEI	TCCGGA	1 cut(s)	539
BspLI	GGNNCC	3 cut(s)	84, 375, 510
BspPI	GGATC	7 cut(s)	83, 157, 304, 368, 381, 688, 807
BspQI	GCTCTTC	1 cut(s)	1152
BspT104I	TTCGAA	1 cut(s)	1363
BspT107I	GGYRCC	1 cut(s)	508
BsrBI	CCGCTC	1 cut(s)	1336
BsrDI	GCAATG	2 cut(s)	411, 668
BsrGI	TGTACA	1 cut(s)	516
BsrI	ACTGG	5 cut(s)	420, 1034, 1226, 1354, 1415
BssECI	CCNNGG	2 cut(s)	1182, 1209
BssNI	GRCGYC	1 cut(s)	54
BssT1I	CCWWGG	1 cut(s)	1209
Bst2UI	CCWGG	1 cut(s)	902
Bst4CI	ACNGT	4 cut(s)	190, 516, 580, 1177
Bst6I	CTCTTC	1 cut(s)	1152
BstACI	GRCGYC	1 cut(s)	54
BstAPI	GCANNNNNTGC	1 cut(s)	1397
BstAUI	TGTACA	1 cut(s)	516
BstBI	TTCGAA	1 cut(s)	1363
BstC8I	GCNNGC	4 cut(s)	481, 600, 1334, 1341
BstDEI	CTNAG	4 cut(s)	78, 390, 960, 1344
BstEII	GGTNACC	1 cut(s)	1177
BstENI	CCTNNNNNAGG	1 cut(s)	1326
BstF5I	GGATG	3 cut(s)	743, 1219, 1235
BstHHI	GCGC	2 cut(s)	731, 1219
BstMAI	GTCTC	1 cut(s)	393
BstMWI	GCNNNNNNNGC	7 cut(s)	62, 74, 461, 485, 494, 1214, 1397
BstNI	CCWGG	1 cut(s)	902
BstNSI	RCATGY	1 cut(s)	34
BstPI	GGTNACC	1 cut(s)	1177
BstSCI	CCNGG	1 cut(s)	900
BstV1I	GCAGC	3 cut(s)	463, 481, 853
BstV2I	GAAGAC	3 cut(s)	57, 1014, 1413
BstX2I	RGATCY	3 cut(s)	162, 373, 799
BstXI	CCANNNNNNTGG	2 cut(s)	1195, 1247
BstYI	RGATCY	3 cut(s)	162, 373, 799
BsuRI	GGCC	5 cut(s)	83, 617, 948, 1187, 1208
BtsCI	GGATG	3 cut(s)	743, 1219, 1235
BtsIMutI	CAGTG	4 cut(s)	141, 512, 576, 1219
Cac8I	GCNNGC	4 cut(s)	481, 600, 1334, 1341
CfoI	GCGC	2 cut(s)	731, 1219
Cfr13I	GGNCC	2 cut(s)	82, 199
CseI	GACGC	1 cut(s)	62
Csp6I	GTAC	3 cut(s)	517, 888, 988
CviAII	CATG	3 cut(s)	31, 370, 734
CviQI	GTAC	3 cut(s)	517, 888, 988
DdeI	CTNAG	4 cut(s)	78, 390, 960, 1344
EaeI	YGGCCR	2 cut(s)	615, 1206
Eam1104I	CTCTTC	1 cut(s)	1152
EarI	CTCTTC	1 cut(s)	1152
Eco130I	CCWWGG	1 cut(s)	1209
Eco47I	GGWCC	1 cut(s)	199
Eco57I	CTGAAG	2 cut(s)	368, 1278
Eco91I	GGTNACC	1 cut(s)	1177
EcoNI	CCTNNNNNAGG	1 cut(s)	1326
EcoO109I	RGGNCCY	1 cut(s)	82
EcoO65I	GGTNACC	1 cut(s)	1177
EcoRI	GAATTC	1 cut(s)	180
EcoRII	CCWGG	1 cut(s)	900
EcoT14I	CCWWGG	1 cut(s)	1209
ErhI	CCWWGG	1 cut(s)	1209
FaeI	CATG	3 cut(s)	34, 373, 737
FaqI	GGGAC	5 cut(s)	302, 551, 942, 1186, 1397
FatI	CATG	3 cut(s)	30, 369, 733
FauNDI	CATATG	1 cut(s)	114
FbaI	TGATCA	1 cut(s)	397
Fnu4HI	GCNGC	5 cut(s)	66, 477, 495, 867, 1337
FokI	GGATG	3 cut(s)	750, 1222, 1226
Fsp4HI	GCNGC	5 cut(s)	66, 477, 495, 867, 1337
FspAI	RTGCGCAY	1 cut(s)	1218
FspBI	CTAG	3 cut(s)	240, 461, 851
FspI	TGCGCA	1 cut(s)	1218
GlaI	GCGC	2 cut(s)	730, 1218
GluI	GCNGC	5 cut(s)	66, 477, 495, 867, 1337
GsaI	CCCAGC	1 cut(s)	606
GsuI	CTGGAG	2 cut(s)	510, 763
HaeIII	GGCC	5 cut(s)	83, 617, 948, 1187, 1208
HapII	CCGG	1 cut(s)	540
HgaI	GACGC	1 cut(s)	62
HhaI	GCGC	2 cut(s)	731, 1219
Hin1I	GRCGYC	1 cut(s)	54
Hin1II	CATG	3 cut(s)	34, 373, 737
Hin6I	GCGC	2 cut(s)	729, 1217
HinP1I	GCGC	2 cut(s)	729, 1217
HincII	GTYRAC	1 cut(s)	1296
HindII	GTYRAC	1 cut(s)	1296
HinfI	GANTC	6 cut(s)	109, 127, 1099, 1130, 1262, 1418
HpaII	CCGG	1 cut(s)	540
HphI	GGTGA	6 cut(s)	449, 1210, 1243, 1262, 1413, 1415
Hpy166II	GTNNAC	4 cut(s)	199, 440, 1134, 1296
Hpy188I	TCNGA	6 cut(s)	42, 247, 355, 393, 685, 1305
Hpy188III	TCNNGA	5 cut(s)	106, 255, 540, 623, 927
Hpy8I	GTNNAC	4 cut(s)	199, 440, 1134, 1296
HpyAV	CCTTC	4 cut(s)	139, 427, 697, 1276
HpyCH4III	ACNGT	4 cut(s)	190, 516, 580, 1177
HpyCH4IV	ACGT	1 cut(s)	1108
HpyCH4V	TGCA	5 cut(s)	10, 483, 673, 882, 1326
HpyF10VI	GCNNNNNNNGC	7 cut(s)	62, 74, 461, 485, 494, 1214, 1397
HpyF3I	CTNAG	4 cut(s)	78, 390, 960, 1344
HpySE526I	ACGT	1 cut(s)	1108
Hsp92I	GRCGYC	1 cut(s)	54
Hsp92II	CATG	3 cut(s)	34, 373, 737
HspAI	GCGC	2 cut(s)	729, 1217
Kpn2I	TCCGGA	1 cut(s)	539
Ksp22I	TGATCA	1 cut(s)	397
LguI	GCTCTTC	1 cut(s)	1152
LmnI	GCTCC	5 cut(s)	241, 491, 647, 772, 1324
Lsp1109I	GCAGC	3 cut(s)	463, 481, 853
LweI	GCATC	1 cut(s)	1204
MaeI	CTAG	3 cut(s)	240, 461, 851
MaeII	ACGT	1 cut(s)	1108
MaeIII	GTNAC	2 cut(s)	1177, 1231
MbiI	CCGCTC	1 cut(s)	1336
MboII	GAAGA	7 cut(s)	62, 764, 1019, 1139, 1271, 1385, 1418
MfeI	CAATTG	5 cut(s)	471, 642, 855, 993, 1002
MflI	RGATCY	3 cut(s)	162, 373, 799
MhlI	GDGCHC	1 cut(s)	1321
MlsI	TGGCCA	2 cut(s)	617, 1208
MluNI	TGGCCA	2 cut(s)	617, 1208
MlyI	GAGTC	1 cut(s)	1139
MmeI	TCCRAC	3 cut(s)	209, 727, 1057
Mox20I	TGGCCA	2 cut(s)	617, 1208
MroI	TCCGGA	1 cut(s)	539
MscI	TGGCCA	2 cut(s)	617, 1208
MseI	TTAA	3 cut(s)	330, 786, 1113
MslI	CAYNNNNRTG	3 cut(s)	736, 1193, 1245
Msp20I	TGGCCA	2 cut(s)	617, 1208
MspI	CCGG	1 cut(s)	540
MspR9I	CCNGG	1 cut(s)	902
MunI	CAATTG	5 cut(s)	471, 642, 855, 993, 1002
MvaI	CCWGG	1 cut(s)	902
MwoI	GCNNNNNNNGC	7 cut(s)	62, 74, 461, 485, 494, 1214, 1397
NdeI	CATATG	1 cut(s)	114
NlaIII	CATG	3 cut(s)	34, 373, 737
NlaIV	GGNNCC	3 cut(s)	84, 375, 510
NmeAIII	GCCGAG	1 cut(s)	136
NmuCI	GTSAC	1 cut(s)	1231
NsbI	TGCGCA	1 cut(s)	1218
NspI	RCATGY	1 cut(s)	34
NspV	TTCGAA	1 cut(s)	1363
OliI	CACNNNNGTG	1 cut(s)	1245
PciSI	GCTCTTC	1 cut(s)	1152
PcsI	WCGNNNNNNNCGW	1 cut(s)	54
PfeI	GAWTC	5 cut(s)	109, 127, 1099, 1262, 1418
PflFI	GACNNNGTC	1 cut(s)	56
PkrI	GCNGC	5 cut(s)	67, 478, 496, 868, 1338
PleI	GAGTC	1 cut(s)	1138
PpsI	GAGTC	1 cut(s)	1138
PsiI	TTATAA	2 cut(s)	584, 834
Psp6I	CCWGG	1 cut(s)	900
PspEI	GGTNACC	1 cut(s)	1177
PspFI	CCCAGC	1 cut(s)	602
PspGI	CCWGG	1 cut(s)	900
PspN4I	GGNNCC	3 cut(s)	84, 375, 510
PspPI	GGNCC	2 cut(s)	82, 199
PsuI	RGATCY	3 cut(s)	162, 373, 799
PsyI	GACNNNGTC	1 cut(s)	56
RsaI	GTAC	3 cut(s)	518, 889, 989
RsaNI	GTAC	3 cut(s)	517, 888, 988
RseI	CAYNNNNRTG	3 cut(s)	736, 1193, 1245
SapI	GCTCTTC	1 cut(s)	1152
SaqAI	TTAA	3 cut(s)	330, 786, 1113
SatI	GCNGC	5 cut(s)	66, 477, 495, 867, 1337
Sau96I	GGNCC	2 cut(s)	82, 199
SchI	GAGTC	1 cut(s)	1139
ScrFI	CCNGG	1 cut(s)	902
SduI	GDGCHC	1 cut(s)	1321
SfaNI	GCATC	1 cut(s)	1204
SfuI	TTCGAA	1 cut(s)	1363
SinI	GGWCC	1 cut(s)	199
SmiMI	CAYNNNNRTG	3 cut(s)	736, 1193, 1245
SsiI	CCGC	2 cut(s)	66, 1336
SspMI	CTAG	3 cut(s)	240, 461, 851
StyD4I	CCNGG	1 cut(s)	900
StyI	CCWWGG	1 cut(s)	1209
TaaI	ACNGT	4 cut(s)	190, 516, 580, 1177
TaiI	ACGT	1 cut(s)	1111
TaqI	TCGA	5 cut(s)	48, 107, 168, 1097, 1363
TatI	WGTACW	1 cut(s)	516
TauI	GCSGC	2 cut(s)	68, 1339
TfiI	GAWTC	5 cut(s)	109, 127, 1099, 1262, 1418
Tru1I	TTAA	3 cut(s)	330, 786, 1113
Tru9I	TTAA	3 cut(s)	330, 786, 1113
TscAI	CASTG	4 cut(s)	141, 519, 583, 1226
TseFI	GTSAC	1 cut(s)	1231
TseI	GCWGC	3 cut(s)	476, 494, 866
Tsp45I	GTSAC	1 cut(s)	1231
TspDTI	ATGAA	1 cut(s)	1258
TspGWI	ACGGA	1 cut(s)	120
TspRI	CASTG	4 cut(s)	141, 519, 583, 1226
Tth111I	GACNNNGTC	1 cut(s)	56
VpaK11BI	GGWCC	1 cut(s)	199
XagI	CCTNNNNNAGG	1 cut(s)	1326
XapI	RAATTY	3 cut(s)	180, 934, 1062
XceI	RCATGY	1 cut(s)	34
XspI	CTAG	3 cut(s)	240, 461, 851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.