Rorug05G0386800

Cytosolic enolase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
52562348 .. 52562704
357 bp
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UTR
Exon/CDS
Intron
Rorug05G0386800.1

Sequence Viewer

Length: 357 bp
ATGGCACGAGTTCCAATGAAAGATGTGTCCAACAATGTTGACAGTTGTAATACTTCAAAATCTGCTTTCCAATACCAAAGGAAATCCAAAGGTACCACTTCTTCCACTACTAAACATCAGCCTCATGTGTTCAAGAAGCTTTCCTTCGAGAATGTGGATGCTAATGTTTTTGGTAAGGGAATTTCTGCTATCTTTGGCCACTGTCCCCCTGAGGATAATATAGCTGGTAATGACATCCAAAATTCCAATAACCTTGTTTCTGAGTGTTTTGTCGAGAAGATCTTTGCTGACAATAGCATTCTGACCAATGATGATAACCTGCCTTCCCAAGTTGGGGATGGTATGGTTGATGCCTAA

Protein Analysis

118

Amino Acids

12.83

Weight (kDa)

5.47

Isoelectric Point (pI)

26.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014315)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 327
Acc65I GGTACC 1 cut(s) 92
AccB1I GGYRCC 1 cut(s) 92
AcoI YGGCCR 1 cut(s) 196
AcsI RAATTY 2 cut(s) 180, 241
AfaI GTAC 1 cut(s) 94
AfiI CCNNNNNNNGG 2 cut(s) 333, 334
AgsI TTSAA 2 cut(s) 57, 133
AluBI AGCT 2 cut(s) 139, 224
AluI AGCT 2 cut(s) 139, 224
AoxI GGCC 1 cut(s) 196
ApoI RAATTY 2 cut(s) 180, 241
Asp718I GGTACC 1 cut(s) 92
AxyI CCTNAGG 1 cut(s) 210
BalI TGGCCA 1 cut(s) 198
BanI GGYRCC 1 cut(s) 92
BarI GAAGNNNNNNTAC 2 cut(s) 85, 117
BauI CACGAG 1 cut(s) 6
BccI CCATC 1 cut(s) 332
BfuAI ACCTGC 1 cut(s) 327
BglII AGATCT 1 cut(s) 279
BmiI GGNNCC 1 cut(s) 94
BmsI GCATC 2 cut(s) 148, 340
Bsc4I CCNNNNNNNGG 2 cut(s) 333, 334
Bse21I CCTNAGG 1 cut(s) 210
BseGI GGATG 3 cut(s) 163, 234, 343
BseLI CCNNNNNNNGG 2 cut(s) 333, 334
BseMII CTCAG 2 cut(s) 201, 252
BshFI GGCC 1 cut(s) 198
BshNI GGYRCC 1 cut(s) 92
BslFI GGGAC 1 cut(s) 189
BslI CCNNNNNNNGG 2 cut(s) 333, 334
BsmFI GGGAC 1 cut(s) 189
BsmI GAATGC 1 cut(s) 297
BsnI GGCC 1 cut(s) 198
Bsp143I GATC 1 cut(s) 279
BspANI GGCC 1 cut(s) 198
BspCNI CTCAG 2 cut(s) 202, 253
BspLI GGNNCC 1 cut(s) 94
BspMI ACCTGC 1 cut(s) 327
BspT107I GGYRCC 1 cut(s) 92
BssMI GATC 1 cut(s) 279
BssSI CACGAG 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 6
Bst4CI ACNGT 2 cut(s) 44, 203
BstDEI CTNAG 2 cut(s) 210, 261
BstF5I GGATG 3 cut(s) 163, 234, 343
BstKTI GATC 1 cut(s) 282
BstMBI GATC 1 cut(s) 279
BstX2I RGATCY 1 cut(s) 279
BstYI RGATCY 1 cut(s) 279
Bsu36I CCTNAGG 1 cut(s) 210
BsuRI GGCC 1 cut(s) 198
BtsCI GGATG 3 cut(s) 163, 234, 343
BtsIMutI CAGTG 1 cut(s) 199
BveI ACCTGC 1 cut(s) 327
Csp6I GTAC 1 cut(s) 93
CviAII CATG 1 cut(s) 125
CviJI RGCY 4 cut(s) 121, 139, 198, 224
CviKI_1 RGCY 4 cut(s) 121, 139, 198, 224
CviQI GTAC 1 cut(s) 93
DdeI CTNAG 2 cut(s) 210, 261
DpnI GATC 1 cut(s) 281
DpnII GATC 1 cut(s) 279
EaeI YGGCCR 1 cut(s) 196
Eco81I CCTNAGG 1 cut(s) 210
FaeI CATG 1 cut(s) 128
FaiI YATR 3 cut(s) 126, 221, 344
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 1 cut(s) 189
FatI CATG 1 cut(s) 124
FokI GGATG 3 cut(s) 170, 221, 350
HaeIII GGCC 1 cut(s) 198
Hin1II CATG 1 cut(s) 128
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HindIII AAGCTT 1 cut(s) 137
Hpy166II GTNNAC 1 cut(s) 40
Hpy188I TCNGA 2 cut(s) 262, 303
Hpy188III TCNNGA 3 cut(s) 133, 148, 274
Hpy8I GTNNAC 1 cut(s) 40
HpyAV CCTTC 2 cut(s) 154, 333
HpyCH4III ACNGT 2 cut(s) 44, 203
HpyF3I CTNAG 2 cut(s) 210, 261
Hsp92II CATG 1 cut(s) 128
KpnI GGTACC 1 cut(s) 96
Kzo9I GATC 1 cut(s) 279
LpnPI CCDG 3 cut(s) 210, 222, 332
LweI GCATC 2 cut(s) 148, 340
MalI GATC 1 cut(s) 281
MboI GATC 1 cut(s) 279
MboII GAAGA 2 cut(s) 93, 289
MflI RGATCY 1 cut(s) 279
MlsI TGGCCA 1 cut(s) 198
MluCI AATT 2 cut(s) 180, 241
MluNI TGGCCA 1 cut(s) 198
MmeI TCCRAC 1 cut(s) 54
MnlI CCTC 2 cut(s) 132, 205
Mox20I TGGCCA 1 cut(s) 198
MscI TGGCCA 1 cut(s) 198
Msp20I TGGCCA 1 cut(s) 198
Mva1269I GAATGC 1 cut(s) 297
NdeII GATC 1 cut(s) 279
NlaIII CATG 1 cut(s) 128
NlaIV GGNNCC 1 cut(s) 94
PctI GAATGC 1 cut(s) 297
PspN4I GGNNCC 1 cut(s) 94
PsuI RGATCY 1 cut(s) 279
RsaI GTAC 1 cut(s) 94
RsaNI GTAC 1 cut(s) 93
Sau3AI GATC 1 cut(s) 279
SetI ASST 5 cut(s) 94, 141, 226, 255, 321
SfaNI GCATC 2 cut(s) 148, 340
Sse9I AATT 2 cut(s) 180, 241
TaaI ACNGT 2 cut(s) 44, 203
TaqI TCGA 2 cut(s) 147, 273
TasI AATT 2 cut(s) 180, 241
TscAI CASTG 1 cut(s) 206
TspDTI ATGAA 1 cut(s) 32
TspRI CASTG 1 cut(s) 206
XapI RAATTY 2 cut(s) 180, 241
XcmI CCANNNNNNNNNTGG 1 cut(s) 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.