Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0007320

Physical Location & Seq

Genomic Coordinates Forward (+)

5894428 .. 5902707

Gene Structure 8280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G087200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

ATGGACGACGAATTGCTGGAATTGCAGAGGCAATTCGAGTTCGCACAGCAGGCGAAATCGAGCATCAGATTATCCGATCGAAACGTCGTCGAATTGGTCCAGAAGCTTCAGGAGCTCCACATCATCGACTTCGAGCTCCTCCACACCGTCTCCGGCAAAGAATACATTACTCCCGATCAACTGAGGCATGAAATATTGGCGGAGGTTAGTAAATTAGGGCGTGTTTCGGTGATTGACCTTGCGGACACAACCGGGGTTGATTTGTATCATGTTGAGAAGCAAGCTCAACGTATTGTTTCGGATGATCCGGGGCTTATGTTGATTCAAGGGGAAATAATATCGCAGTCGTATTGGGATTCTATTGCCGAAGAAGTCAATGACAGGCTTCAAGAATGTAGCCAAATTGCTTTGGCAGAACTTGCAGCTCAGTTACATGTCAGTTCAGAAATGGTGGCATCTGTGTTGGAGCCCCGCCTTGGGACTGTGGTGAAAGGTAGGCTTGAAGGTGGGCAGTTGTATACTCCTGCATATGTTGCACGTGTTACTGCCATGGTTCGTGGTGCTGCCAGGGGTATCACAGTTCCCACCAACTTATCAGTGTTGTGGAGTTCTTTACAACAGTTGCTGCAAGAAATGGATGGAGCCAGTGGTGTGGCTGTTGAAGGTTCATTTTTCCAATCCCTGTTTAATGGGCTTGTAAAGGAGGGCGAGATTCTTGGATCACTTCGAGCTGGAGTTCATTGGACACCGAATGTCTTTGCCAGTGCTCAAAAGGAATCAATTGATTCTTTCTTTTCACAGAATTCTTTCATTAGCTATGAAGTTCTGCACAAACTTAGAATTCCTCAACCTATTCAGTTCTTGCAGTCTAGATATCCGGAAGGTATGCCTTTGGTTACTACATTTGTTCACCCCTCGATGATTGAGATGCTTGATGCTGCTACTGAAGATGCTCTTGAGCGTAGTAGTTGGATTGATTCTCTCTCTATGCTGCCGATGTCCTTTGGGTCTCAAGATGCATCTAAACTTTTGTCCCTTTGTCCTTCCATTCAGCAGGGTCTTAAGTCTGATAAAGCAAAAATATTTGGGGAGTCTTATGTATTTAGCAATGGTTTTATCAAGGATGTGTATGATCGCCTGGAGAAAGAAATGGAAACCTTTAATGTTTCAGGTGCTTCTGGTACCGTGGTGTCAGATGATTTGCGCGAGACAAAAGCTGGTCATGACACAAGCAGGTTGACTGAGTCAACTGAAAATGTTAGTGATAGCAGCGGTAATAAACAGGCCATGGAGAAAGGATCCAAAAAGAAAAAGAGCAAAGGGGCTGGGAATATGATGACAGGTCCAGCTGAGAATGAGCTGGATAACCAGGACCGTGCTCCTACGAAATCTAAGAAAAATCAAAGGAAAGGCAAGAATATCTCTTCCGAACAAGTTGCAGAGTCAAAAGCAGCTGCTAAGTTGGTAAAAATCAAAGAGGAAAATCTCAACATTCCTTCAGAAGATTGGGTAATGAAGAAGATTGCAACATTGGTACCTGATTTTGAAGAACAAGGTCTCGATGATCCTCAAACAATTCTAAGACCTCTGGCAAACTATTTGAGACCTATGCTAATCAACTCTTGGAAGGAGAGAAGAAAGGCATTGTTTTCAGAAAATGCAGAGAGAATGAAGCAATTGCTTGATAGTTTGCAAAAGAAATTTGATGAGTCTTTCTTAAACATGCAGCTTTATGAAAAGGCTTTAGATTTGTTTGAAGATGACCAATCAACTTCAGTCATTTTGCACCGGCATCTGTTAAGAACAACAGCTACTACTATTGTTGACATGCTTCTTCAAAATTTGGACGTGCACAACAAATTGAAGAACGGAGATGAAGTTGCAGAGCCTCAGATTTCAGAATCTATTTCCCTTAATCCTGGAGAAAGAACTTCCATTGCCAAGACTCTTCCTGGATCTCTTTCAAATAAAGCTCTTGCTGTAGTTGAAGCTTTGGAAGGAAAGCGGGTGGAAACATTTATGACTGCTCTAAGAGACATTGCAGAAGAGAGCGGCTTGCTCTTGAAAAAGCTGGACAAGAAATTGGAAAGAACACTTCTGCATGCATATCAAAAGGATTTGGTGTCTCAAGTTTCTGCTGAGATGGATCCAGTTTCTCTTTTAGCAAAAGTTGTTTCCCTGATTTATGTACAGGTTCACCATAAGGCTCTTCAAGCACCTGGAAGGGCCATCGCTGTGGCTGTTTCACGGCTGAAGGATAAACTAGATGATTCAGCCCACAAGATCTTGACAGATTATCAAACTGCAACAGTGACCCTCTTGGCACTAATATCTGCTGCAAGTGGAGATGGAGAAGATTGTACATCTGATAGAATTTTGAACAAAAGGGAGCTGCTAGAAAATCAAATGACTGCACTCAAAGGCCTCGTTTTAGGCACCTCAAAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E3_UFM1_ligase

Protein Analysis

817

Amino Acids

90.45

Weight (kDa)

5.41

Isoelectric Point (pI)

39.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46220 AT3G46220 AT3G46220 AT3G46220
fragaria_vesca	FvH4_3g34630 FvH4_3g34630 FvH4_3g34630 FvH4_3g34630 FvH4_3g34630
malus_domestica	MD03G1103200.v1.1 MD11G1116800.v1.1
prunus_persica	Prupe.6G087200_v2.0.a1 Prupe.6G087200_v2.0.a1
pyrus_communis	pycom03g08380 pycom11g09820
rosa_chinensis	RchiOBHm_Chr5g0062341
rosa_laevigata	RLG00000035551
rosa_multiflora	Rmu_co8354903.1_g000001 Rmu_sc0006295.1_g000003
rosa_roxburghii	Rroxscaffold_1G00018340
rosa_rugosa	Rorug05G0348800
rosa_samantha	Rh5BG422200 Rh5CG446200 Rh5DG437200
rosa_wichuraiana	Rw5G038490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1224
Acc65I	GGTACC	2 cut(s)	1181, 1534
AccB1I	GGYRCC	3 cut(s)	1181, 1534, 2435
AccBSI	CCGCTC	1 cut(s)	2052
AccI	GTMKAC	1 cut(s)	518
AccII	CGCG	1 cut(s)	1206
AccIII	TCCGGA	1 cut(s)	877
AciI	CCGC	6 cut(s)	200, 242, 472, 1272, 2005, 2052
AclWI	GGATC	8 cut(s)	299, 727, 1293, 1306, 1559, 1963, 2141, 2154
AcsI	RAATTY	5 cut(s)	802, 840, 1700, 1840, 2373
AcuI	CTGAAG	5 cut(s)	92, 966, 1482, 1758, 2273
AcvI	CACGTG	1 cut(s)	539
AfaI	GTAC	4 cut(s)	1183, 1536, 2190, 2362
AfiI	CCNNNNNNNGG	2 cut(s)	476, 477
AflII	CTTAAG	1 cut(s)	1061
AflIII	ACRYGT	2 cut(s)	433, 538
AjiI	CACGTC	1 cut(s)	1849
AjnI	CCWGG	6 cut(s)	566, 1137, 1368, 1918, 1951, 2218
Alw21I	GWGCWC	5 cut(s)	117, 138, 769, 1381, 1854
Alw26I	GTCTC	7 cut(s)	154, 1014, 1202, 1562, 1597, 2028, 2130
Alw44I	GTGCAC	1 cut(s)	1850
AlwI	GGATC	8 cut(s)	299, 727, 1293, 1306, 1559, 1963, 2141, 2154
AlwNI	CAGNNNCTG	1 cut(s)	625
Aor13HI	TCCGGA	1 cut(s)	877
AoxI	GGCC	3 cut(s)	1284, 2226, 2422
ApaLI	GTGCAC	1 cut(s)	1850
ApoI	RAATTY	5 cut(s)	802, 840, 1700, 1840, 2373
Asp700I	GAANNNNTTC	1 cut(s)	806
Asp718I	GGTACC	2 cut(s)	1181, 1534
AspLEI	GCGC	1 cut(s)	1206
AspS9I	GGNCC	4 cut(s)	97, 1343, 1372, 2226
AsuC2I	CCSGG	2 cut(s)	253, 309
AsuHPI	GGTGA	4 cut(s)	241, 499, 902, 2189
AvaII	GGWCC	3 cut(s)	97, 1343, 1372
BaeGI	GKGCMC	1 cut(s)	1854
BaeI	ACNNNNGTAYC	4 cut(s)	1173, 1206, 1518, 1551
BamHI	GGATCC	2 cut(s)	1298, 2146
BanI	GGYRCC	3 cut(s)	1181, 1534, 2435
BanII	GRGCYC	3 cut(s)	117, 138, 471
BbrPI	CACGTG	1 cut(s)	539
Bbv12I	GWGCWC	5 cut(s)	117, 138, 769, 1381, 1854
BccI	CCATC	4 cut(s)	632, 2137, 2237, 2342
BceAI	ACGGC	1 cut(s)	2264
BcgI	CGANNNNNNTGC	2 cut(s)	1418, 1452
BciT130I	CCWGG	6 cut(s)	568, 1139, 1370, 1920, 1953, 2220
BcnI	CCSGG	2 cut(s)	253, 309
BcoDI	GTCTC	7 cut(s)	154, 1014, 1202, 1562, 1597, 2028, 2130
BfaI	CTAG	3 cut(s)	870, 2264, 2396
BfmI	CTRYAG	1 cut(s)	1980
BfrI	CTTAAG	1 cut(s)	1061
BfuAI	ACCTGC	1 cut(s)	1224
BglII	AGATCT	1 cut(s)	2283
Bme1390I	CCNGG	8 cut(s)	253, 309, 568, 1139, 1370, 1920, 1953, 2220
Bme18I	GGWCC	3 cut(s)	97, 1343, 1372
BmgBI	CACGTC	1 cut(s)	1849
BmgT120I	GGNCC	4 cut(s)	97, 1343, 1372, 2226
BmiI	GGNNCC	7 cut(s)	468, 643, 1183, 1300, 1536, 2148, 2437
BmrFI	CCNGG	8 cut(s)	253, 309, 568, 1139, 1370, 1920, 1953, 2220
BmsI	GCATC	8 cut(s)	72, 464, 918, 925, 940, 1006, 1028, 1801
BpmI	CTGGAG	3 cut(s)	753, 1160, 1941
BpuEI	CTTGAG	3 cut(s)	977, 996, 2112
BpuMI	CCSGG	2 cut(s)	253, 309
BsaAI	YACGTR	1 cut(s)	539
BsaBI	GATNNNNATC	1 cut(s)	264
BsaI	GGTCTC	3 cut(s)	1014, 1562, 1597
BsaJI	CCNNGG	7 cut(s)	252, 308, 475, 549, 567, 1185, 1287
BsaWI	WCCGGW	1 cut(s)	877
BsaXI	ACNNNNNCTCC	4 cut(s)	134, 164, 1863, 1893
Bsc4I	CCNNNNNNNGG	2 cut(s)	476, 477
Bse118I	RCCGGY	1 cut(s)	1788
Bse1I	ACTGG	3 cut(s)	645, 762, 2150
Bse3DI	GCAATG	3 cut(s)	1114, 1935, 2037
Bse8I	GATNNNNATC	1 cut(s)	264
BseAI	TCCGGA	1 cut(s)	877
BseBI	CCWGG	6 cut(s)	568, 1139, 1370, 1920, 1953, 2220
BseDI	CCNNGG	7 cut(s)	252, 308, 475, 549, 567, 1185, 1287
BseGI	GGATG	3 cut(s)	307, 643, 1129
BseJI	GATNNNNATC	1 cut(s)	264
BseLI	CCNNNNNNNGG	2 cut(s)	476, 477
BseMI	GCAATG	3 cut(s)	1114, 1935, 2037
BseMII	CTCAG	6 cut(s)	173, 440, 1233, 1341, 1904, 2130
BseNI	ACTGG	3 cut(s)	645, 762, 2150
BseRI	GAGGAG	1 cut(s)	128
BseSI	GKGCMC	1 cut(s)	1854
BseYI	CCCAGC	1 cut(s)	1325
BsgI	GTGCAG	2 cut(s)	812, 2397
Bsh1236I	CGCG	1 cut(s)	1206
Bsh1285I	CGRYCG	1 cut(s)	79
BshFI	GGCC	3 cut(s)	1286, 2228, 2424
BshNI	GGYRCC	3 cut(s)	1181, 1534, 2435
BsiEI	CGRYCG	1 cut(s)	79
BsiHKAI	GWGCWC	5 cut(s)	117, 138, 769, 1381, 1854
BsiSI	CCGG	5 cut(s)	153, 252, 308, 878, 1789
BslFI	GGGAC	2 cut(s)	493, 1018
BslI	CCNNNNNNNGG	2 cut(s)	476, 477
BsmAI	GTCTC	7 cut(s)	154, 1014, 1202, 1562, 1597, 2028, 2130
BsmBI	CGTCTC	1 cut(s)	154
BsmFI	GGGAC	2 cut(s)	493, 1018
BsnI	GGCC	3 cut(s)	1286, 2228, 2424
Bso31I	GGTCTC	3 cut(s)	1014, 1562, 1597
Bsp1286I	GDGCHC	6 cut(s)	117, 138, 471, 769, 1381, 1854
Bsp13I	TCCGGA	1 cut(s)	877
Bsp1407I	TGTACA	2 cut(s)	2188, 2360
Bsp19I	CCATGG	2 cut(s)	549, 1287
BspACI	CCGC	6 cut(s)	200, 242, 472, 1272, 2005, 2052
BspANI	GGCC	3 cut(s)	1286, 2228, 2424
BspCNI	CTCAG	6 cut(s)	174, 439, 1234, 1342, 1903, 2131
BspEI	TCCGGA	1 cut(s)	877
BspFNI	CGCG	1 cut(s)	1206
BspHI	TCATGA	1 cut(s)	1222
BspLI	GGNNCC	7 cut(s)	468, 643, 1183, 1300, 1536, 2148, 2437
BspMI	ACCTGC	1 cut(s)	1224
BspPI	GGATC	8 cut(s)	299, 727, 1293, 1306, 1559, 1963, 2141, 2154
BspQI	GCTCTTC	1 cut(s)	2214
BspT107I	GGYRCC	3 cut(s)	1181, 1534, 2435
BspTI	CTTAAG	1 cut(s)	1061
BspTNI	GGTCTC	3 cut(s)	1014, 1562, 1597
BsrBI	CCGCTC	1 cut(s)	2052
BsrDI	GCAATG	3 cut(s)	1114, 1935, 2037
BsrFI	RCCGGY	1 cut(s)	1788
BsrGI	TGTACA	2 cut(s)	2188, 2360
BsrI	ACTGG	3 cut(s)	645, 762, 2150
BssAI	RCCGGY	1 cut(s)	1788
BssECI	CCNNGG	7 cut(s)	252, 308, 475, 549, 567, 1185, 1287
BssNAI	GTATAC	1 cut(s)	519
BssT1I	CCWWGG	3 cut(s)	475, 549, 1287
Bst1107I	GTATAC	1 cut(s)	519
Bst2UI	CCWGG	6 cut(s)	568, 1139, 1370, 1920, 1953, 2220
Bst4CI	ACNGT	7 cut(s)	148, 484, 580, 621, 1186, 1376, 2311
Bst6I	CTCTTC	4 cut(s)	1429, 1953, 2040, 2214
BstAFI	CTTAAG	1 cut(s)	1061
BstAPI	GCANNNNNTGC	2 cut(s)	419, 533
BstAUI	TGTACA	2 cut(s)	2188, 2360
BstBAI	YACGTR	1 cut(s)	539
BstC8I	GCNNGC	4 cut(s)	51, 282, 2057, 2103
BstDSI	CCRYGG	3 cut(s)	549, 1185, 1287
BstF5I	GGATG	3 cut(s)	307, 643, 1129
BstFNI	CGCG	1 cut(s)	1206
BstHHI	GCGC	1 cut(s)	1206
BstMAI	GTCTC	7 cut(s)	154, 1014, 1202, 1562, 1597, 2028, 2130
BstMCI	CGRYCG	1 cut(s)	79
BstMWI	GCNNNNNNNGC	6 cut(s)	22, 50, 112, 419, 533, 2213
BstNI	CCWGG	6 cut(s)	568, 1139, 1370, 1920, 1953, 2220
BstNSI	RCATGY	4 cut(s)	437, 1726, 1831, 2105
BstSCI	CCNGG	8 cut(s)	251, 307, 566, 1137, 1368, 1918, 1951, 2218
BstSFI	CTRYAG	1 cut(s)	1980
BstSLI	GKGCMC	1 cut(s)	1854
BstUI	CGCG	1 cut(s)	1206
BstX2I	RGATCY	4 cut(s)	1298, 1955, 2146, 2283
BstXI	CCANNNNNNTGG	2 cut(s)	652, 2236
BstYI	RGATCY	4 cut(s)	1298, 1955, 2146, 2283
BstZ17I	GTATAC	1 cut(s)	519
BsuRI	GGCC	3 cut(s)	1286, 2228, 2424
BtgI	CCRYGG	3 cut(s)	549, 1185, 1287
BtgZI	GCGATG	1 cut(s)	2215
BtrI	CACGTC	1 cut(s)	1849
BtsCI	GGATG	3 cut(s)	307, 643, 1129
BtsIMutI	CAGTG	4 cut(s)	603, 652, 769, 2316
BveI	ACCTGC	1 cut(s)	1224
Cac8I	GCNNGC	4 cut(s)	51, 282, 2057, 2103
CaiI	CAGNNNCTG	1 cut(s)	625
CciI	TCATGA	1 cut(s)	1222
CfoI	GCGC	1 cut(s)	1206
Cfr10I	RCCGGY	1 cut(s)	1788
Cfr13I	GGNCC	4 cut(s)	97, 1343, 1372, 2226
Csp6I	GTAC	4 cut(s)	1182, 1535, 2189, 2361
CviAII	CATG	9 cut(s)	188, 269, 434, 550, 1223, 1288, 1723, 1828, 2102
CviQI	GTAC	4 cut(s)	1182, 1535, 2189, 2361
Eam1104I	CTCTTC	4 cut(s)	1429, 1953, 2040, 2214
EarI	CTCTTC	4 cut(s)	1429, 1953, 2040, 2214
EciI	GGCGGA	1 cut(s)	215
Ecl136II	GAGCTC	2 cut(s)	115, 136
Eco130I	CCWWGG	3 cut(s)	475, 549, 1287
Eco147I	AGGCCT	1 cut(s)	2424
Eco24I	GRGCYC	3 cut(s)	117, 138, 471
Eco31I	GGTCTC	3 cut(s)	1014, 1562, 1597
Eco32I	GATATC	1 cut(s)	875
Eco47I	GGWCC	3 cut(s)	97, 1343, 1372
Eco53kI	GAGCTC	2 cut(s)	115, 136
Eco57I	CTGAAG	5 cut(s)	92, 966, 1482, 1758, 2273
Eco72I	CACGTG	1 cut(s)	539
EcoICRI	GAGCTC	2 cut(s)	115, 136
EcoRI	GAATTC	2 cut(s)	802, 840
EcoRII	CCWGG	6 cut(s)	566, 1137, 1368, 1918, 1951, 2218
EcoRV	GATATC	1 cut(s)	875
EcoT14I	CCWWGG	3 cut(s)	475, 549, 1287
EcoT22I	ATGCAT	2 cut(s)	1021, 2107
EcoT38I	GRGCYC	3 cut(s)	117, 138, 471
ErhI	CCWWGG	3 cut(s)	475, 549, 1287
Esp3I	CGTCTC	1 cut(s)	154
FaeI	CATG	9 cut(s)	191, 272, 437, 553, 1226, 1291, 1726, 1831, 2105
FalI	AAGNNNNNCTT	4 cut(s)	483, 515, 939, 971
FaqI	GGGAC	2 cut(s)	493, 1018
FatI	CATG	9 cut(s)	187, 268, 433, 549, 1222, 1287, 1722, 1827, 2101
FauI	CCCGC	2 cut(s)	479, 1998
FauNDI	CATATG	1 cut(s)	529
FblI	GTMKAC	1 cut(s)	518
FokI	GGATG	3 cut(s)	314, 650, 1136
FriOI	GRGCYC	3 cut(s)	117, 138, 471
FspBI	CTAG	3 cut(s)	870, 2264, 2396
GlaI	GCGC	1 cut(s)	1205
GsaI	CCCAGC	1 cut(s)	1329
GsuI	CTGGAG	3 cut(s)	753, 1160, 1941
HaeIII	GGCC	3 cut(s)	1286, 2228, 2424
HapII	CCGG	5 cut(s)	153, 252, 308, 878, 1789
HhaI	GCGC	1 cut(s)	1206
Hin1II	CATG	9 cut(s)	191, 272, 437, 553, 1226, 1291, 1726, 1831, 2105
Hin6I	GCGC	1 cut(s)	1204
HinP1I	GCGC	1 cut(s)	1204
HincII	GTYRAC	3 cut(s)	1239, 1248, 1825
HindII	GTYRAC	3 cut(s)	1239, 1248, 1825
HindIII	AAGCTT	2 cut(s)	104, 1989
HpaII	CCGG	5 cut(s)	153, 252, 308, 878, 1789
HphI	GGTGA	4 cut(s)	241, 499, 902, 2189
Hpy166II	GTNNAC	7 cut(s)	519, 910, 1239, 1248, 1825, 1852, 2197
Hpy8I	GTNNAC	7 cut(s)	519, 910, 1239, 1248, 1825, 1852, 2197
Hpy99I	CGWCG	3 cut(s)	11, 89, 92
HpyAV	CCTTC	9 cut(s)	497, 656, 875, 1053, 1506, 1621, 1991, 2217, 2248
HpyCH4III	ACNGT	7 cut(s)	148, 484, 580, 621, 1186, 1376, 2311
HpyCH4IV	ACGT	4 cut(s)	84, 289, 538, 1848
HpyF10VI	GCNNNNNNNGC	6 cut(s)	22, 50, 112, 419, 533, 2213
HpySE526I	ACGT	4 cut(s)	84, 289, 538, 1848
Hsp92II	CATG	9 cut(s)	191, 272, 437, 553, 1226, 1291, 1726, 1831, 2105
HspAI	GCGC	1 cut(s)	1204
Kpn2I	TCCGGA	1 cut(s)	877
KpnI	GGTACC	2 cut(s)	1185, 1538
LguI	GCTCTTC	1 cut(s)	2214
LmnI	GCTCC	7 cut(s)	112, 120, 141, 466, 641, 1384, 2389
LweI	GCATC	8 cut(s)	72, 464, 918, 925, 940, 1006, 1028, 1801
MaeI	CTAG	3 cut(s)	870, 2264, 2396
MaeII	ACGT	4 cut(s)	84, 289, 538, 1848
MaeIII	GTNAC	4 cut(s)	429, 541, 895, 2311
MbiI	CCGCTC	1 cut(s)	2052
MfeI	CAATTG	2 cut(s)	780, 1676
MflI	RGATCY	4 cut(s)	1298, 1955, 2146, 2283
MhlI	GDGCHC	6 cut(s)	117, 138, 471, 769, 1381, 1854
MlyI	GAGTC	5 cut(s)	1100, 1253, 1451, 1718, 1939
MmeI	TCCRAC	2 cut(s)	444, 950
Mph1103I	ATGCAT	2 cut(s)	1021, 2107
MroI	TCCGGA	1 cut(s)	877
MroXI	GAANNNNTTC	1 cut(s)	806
MseI	TTAA	6 cut(s)	687, 1062, 1161, 1718, 1799, 1914
MslI	CAYNNNNRTG	1 cut(s)	2234
MspA1I	CMGCKG	3 cut(s)	1272, 1349, 1454
MspCI	CTTAAG	1 cut(s)	1061
MspI	CCGG	5 cut(s)	153, 252, 308, 878, 1789
MspR9I	CCNGG	8 cut(s)	253, 309, 568, 1139, 1370, 1920, 1953, 2220
MunI	CAATTG	2 cut(s)	780, 1676
MvaI	CCWGG	6 cut(s)	568, 1139, 1370, 1920, 1953, 2220
MvnI	CGCG	1 cut(s)	1206
MwoI	GCNNNNNNNGC	6 cut(s)	22, 50, 112, 419, 533, 2213
NciI	CCSGG	2 cut(s)	253, 309
NcoI	CCATGG	2 cut(s)	549, 1287
NdeI	CATATG	1 cut(s)	529
NlaIII	CATG	9 cut(s)	191, 272, 437, 553, 1226, 1291, 1726, 1831, 2105
NlaIV	GGNNCC	7 cut(s)	468, 643, 1183, 1300, 1536, 2148, 2437
NmuCI	GTSAC	1 cut(s)	2311
NsiI	ATGCAT	2 cut(s)	1021, 2107
NspI	RCATGY	4 cut(s)	437, 1726, 1831, 2105
PaeI	GCATGC	1 cut(s)	2105
PagI	TCATGA	1 cut(s)	1222
PceI	AGGCCT	1 cut(s)	2424
PciI	ACATGT	1 cut(s)	433
PciSI	GCTCTTC	1 cut(s)	2214
PdmI	GAANNNNTTC	1 cut(s)	806
PfeI	GAWTC	8 cut(s)	322, 356, 712, 776, 785, 977, 1901, 2270
PflFI	GACNNNGTC	1 cut(s)	1243
PfoI	TCCNGGA	2 cut(s)	1918, 1951
Ple19I	CGATCG	1 cut(s)	79
PleI	GAGTC	5 cut(s)	1099, 1252, 1450, 1717, 1939
PmaCI	CACGTG	1 cut(s)	539
PmlI	CACGTG	1 cut(s)	539
PpsI	GAGTC	5 cut(s)	1099, 1252, 1450, 1717, 1939
Ppu21I	YACGTR	1 cut(s)	539
PscI	ACATGT	1 cut(s)	433
Psp124BI	GAGCTC	2 cut(s)	117, 138
Psp6I	CCWGG	6 cut(s)	566, 1137, 1368, 1918, 1951, 2218
PspCI	CACGTG	1 cut(s)	539
PspFI	CCCAGC	1 cut(s)	1325
PspGI	CCWGG	6 cut(s)	566, 1137, 1368, 1918, 1951, 2218
PspN4I	GGNNCC	7 cut(s)	468, 643, 1183, 1300, 1536, 2148, 2437
PspPI	GGNCC	4 cut(s)	97, 1343, 1372, 2226
PsrI	GAACNNNNNNTAC	2 cut(s)	1795, 1827
PstNI	CAGNNNCTG	1 cut(s)	625
PsuI	RGATCY	4 cut(s)	1298, 1955, 2146, 2283
PsyI	GACNNNGTC	1 cut(s)	1243
PvuI	CGATCG	1 cut(s)	79
PvuII	CAGCTG	2 cut(s)	1349, 1454
RsaI	GTAC	4 cut(s)	1183, 1536, 2190, 2362
RsaNI	GTAC	4 cut(s)	1182, 1535, 2189, 2361
RseI	CAYNNNNRTG	1 cut(s)	2234
SacI	GAGCTC	2 cut(s)	117, 138
SapI	GCTCTTC	1 cut(s)	2214
SaqAI	TTAA	6 cut(s)	687, 1062, 1161, 1718, 1799, 1914
Sau96I	GGNCC	4 cut(s)	97, 1343, 1372, 2226
SchI	GAGTC	5 cut(s)	1100, 1253, 1451, 1718, 1939
ScrFI	CCNGG	8 cut(s)	253, 309, 568, 1139, 1370, 1920, 1953, 2220
SduI	GDGCHC	6 cut(s)	117, 138, 471, 769, 1381, 1854
SfaNI	GCATC	8 cut(s)	72, 464, 918, 925, 940, 1006, 1028, 1801
SfcI	CTRYAG	1 cut(s)	1980
SinI	GGWCC	3 cut(s)	97, 1343, 1372
SmiMI	CAYNNNNRTG	1 cut(s)	2234
SmlI	CTYRAG	4 cut(s)	956, 1011, 1061, 2127
SmoI	CTYRAG	4 cut(s)	956, 1011, 1061, 2127
SphI	GCATGC	1 cut(s)	2105
SseBI	AGGCCT	1 cut(s)	2424
SsiI	CCGC	6 cut(s)	200, 242, 472, 1272, 2005, 2052
SspI	AATATT	2 cut(s)	195, 1083
SspMI	CTAG	3 cut(s)	870, 2264, 2396
SstI	GAGCTC	2 cut(s)	117, 138
StuI	AGGCCT	1 cut(s)	2424
StyD4I	CCNGG	8 cut(s)	251, 307, 566, 1137, 1368, 1918, 1951, 2218
StyI	CCWWGG	3 cut(s)	475, 549, 1287
TaaI	ACNGT	7 cut(s)	148, 484, 580, 621, 1186, 1376, 2311
TaiI	ACGT	4 cut(s)	87, 292, 541, 1851
TaqI	TCGA	9 cut(s)	36, 59, 79, 90, 126, 132, 727, 917, 1560
TatI	WGTACW	2 cut(s)	2188, 2360
TauI	GCSGC	1 cut(s)	2055
TfiI	GAWTC	8 cut(s)	322, 356, 712, 776, 785, 977, 1901, 2270
Tru1I	TTAA	6 cut(s)	687, 1062, 1161, 1718, 1799, 1914
Tru9I	TTAA	6 cut(s)	687, 1062, 1161, 1718, 1799, 1914
TscAI	CASTG	4 cut(s)	603, 652, 769, 2316
TseFI	GTSAC	1 cut(s)	2311
Tsp45I	GTSAC	1 cut(s)	2311
TspDTI	ATGAA	9 cut(s)	204, 657, 728, 799, 834, 1529, 1685, 1749, 1890
TspGWI	ACGGA	1 cut(s)	1884
TspRI	CASTG	4 cut(s)	603, 652, 769, 2316
Tth111I	GACNNNGTC	1 cut(s)	1243
Vha464I	CTTAAG	1 cut(s)	1061
VneI	GTGCAC	1 cut(s)	1850
VpaK11BI	GGWCC	3 cut(s)	97, 1343, 1372
XapI	RAATTY	5 cut(s)	802, 840, 1700, 1840, 2373
XbaI	TCTAGA	1 cut(s)	869
XceI	RCATGY	4 cut(s)	437, 1726, 1831, 2105
XmiI	GTMKAC	1 cut(s)	518
XmnI	GAANNNNTTC	1 cut(s)	806
XspI	CTAG	3 cut(s)	870, 2264, 2396
Zsp2I	ATGCAT	2 cut(s)	1021, 2107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.