Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006295.1

Orthogroup ID

OG0007320

Physical Location & Seq

Genomic Coordinates Reverse (-)

16981 .. 24851

Gene Structure 7871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006295.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2559 bp

atgagtcgggtcgaaacgtcaaaacggagaggagagaaggcgaagccaaaccgatccgtcactctcccagagagtctcaacacagtgatcggaaaaacaaaaatggacgacgaattggtggaattgcagaagcaattcgagtcggcacagcaagcgaaatcgagcatcagattgtccgatcgaaacgtcgtcgaattggtccaaaagcttcacgagctccacatcatcgacttcgacctcctccacaccgtctccggcaaagaatacatcactccggatcaattgaggcatgaaatactggtggaggtcaagaggttgggccgtatatcactgattgaccttgcagatgctattggggttgatttgtaccatgtcgagaagcaagctcaacatgtggtttctgatgatccggggcttatgttgattcagggggaaataatatcacagtcctattgggattccgtcgctgaagaaatcaatgagaggcttcaagaatgtagccaagttgctttggcagaacttgccgcacagttgcatgtcagttctgaaatggtgacatctgtgttggagccgcgccttgggactacggtgaaaggtaggcttgaaggtgggcaattgtatacccctgcttatgttgcacgtgtcactgccatggttcgtggtgctgctagggctatcacagttcccacaaacttatcagtcttgtggagttctttacagcagttgctgcaagaaatggagggagccagtggtgtagctgtagaaggttcatttttccaatccctttttaacgggcttgtaaaggaaggcgagattcttggatcacttcgtgcaggagttcattggacaccaaatgtttttgccattgctcagaaggaatcaattgattcttttttctcacagaactctttcattagctatgacgttctgcagaagcttagaattccccagcctgatcagttcttgcagtccagatatcctgaatgcatacctttggttactacatttattcacccatcaatgattgagatgcttgatgctgctatagaagatgctcttgagcgtgggagctggatggattctctttctatactgccaatgtcctttggatctcaagatgcatccaaacttttgtccctttgtccttccattcagcagggcctcaagtctgataaggcaataatcttcggggaatcctttgtatttagcagtgcctttatcaaggatgtgtacgatcgcctggagaaagaaatggaaacctttatagtttcgagtacttctggtactatggtgtcagatgatttgcaggagacaaaagttggtcacgaaacaagcagattcaccgaatcaaatgaaacggttagtgacagcagcagtaataaacagaccatggagaaaggatcaaagaagaaaaagggtcgagtggctggaaatatgggagcaggtgcagctgaaggtgatccggaaaaccaggactctgttcctacaaaatctaagaaaaaccaaaggaaaggcaagaattcctcctccgcacaagttgctgactcaaaagcatctgctaagttggtaaaatctaaagaggaaaatctgaacattccttcagaagattggatgatgaacaagattgcaacactggttcctgaattcgaagaacaaggtcttgatgatccacaaacaattattagacctttggcaaactatgtgagacctatgctaataaactcttggaaggagagaagaaaggcattgtttactgaaaatgcagagagaatgaagcacttgcttgataatttgcaaaagaaacttgatgagtctttcttaaacatgcagctctacgaaaaagctttagatttgtttgaagatgacccatcaacttcagtcattttgcaccggcatttgttaagaacaacagctagtactattgtggatatgcttcttcttaatttggacatgcacaacaaattgaagaatggagttgaagttgaggacactcagatttcagaatcttcttcacttaacccaggagaaagaacttccattgctaagaattttcctggatctctctcaaagaaggctcttgttgttgttgaagctttggaaggaaagcgggtggaaacattcatgactgctttaagagacatagctgaagaaagtggtttactcctgaaaaagcttgacaagaagttggaaagaacacttttgcattcgtatcaaaaggatttggcgtctcaagtttctgctgaaatggatccagtctctgttttggccaaagttgtttccctgctatatgtacagattcaccataaagctctccaagcacctggaagggccatcgctgttgctgtttctcggctgaaggataaactagatgaatcagctttcaagatcctgacagaatatcaaactgcaacagtaaccctcttagcactaatatccgctgcaagtggagatgaagaagactgtacatctgatagaatattgagcaaaagggagctcctggaaaatcaaatgcctgcactgaaaggcctggttttgcgcaccggcacctcacaatcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E3_UFM1_ligase

Protein Analysis

852

Amino Acids

94.55

Weight (kDa)

5.55

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46220 AT3G46220 AT3G46220 AT3G46220
fragaria_vesca	FvH4_3g34630 FvH4_3g34630 FvH4_3g34630 FvH4_3g34630 FvH4_3g34630
malus_domestica	MD03G1103200.v1.1 MD11G1116800.v1.1
prunus_persica	Prupe.6G087200_v2.0.a1 Prupe.6G087200_v2.0.a1
pyrus_communis	pycom03g08380 pycom11g09820
rosa_chinensis	RchiOBHm_Chr5g0062341
rosa_laevigata	RLG00000035551
rosa_multiflora	Rmu_co8354903.1_g000001 Rmu_sc0006295.1_g000003
rosa_roxburghii	Rroxscaffold_1G00018340
rosa_rugosa	Rorug05G0348800
rosa_samantha	Rh5BG422200 Rh5CG446200 Rh5DG437200
rosa_wichuraiana	Rw5G038490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1433
Acc16I	TGCGCA	1 cut(s)	2537
Acc36I	ACCTGC	1 cut(s)	1433
AccB1I	GGYRCC	1 cut(s)	2543
AccI	GTMKAC	1 cut(s)	620
AccII	CGCG	1 cut(s)	574
AccIII	TCCGGA	2 cut(s)	274, 1462
AciI	CCGC	5 cut(s)	525, 572, 1530, 2107, 2436
AcoI	YGGCCR	1 cut(s)	2265
AcsI	RAATTY	4 cut(s)	942, 1519, 1643, 2047
AcuI	CTGAAG	6 cut(s)	489, 1473, 1584, 1860, 2166, 2375
AcvI	CACGTG	1 cut(s)	641
AcyI	GRCGYC	1 cut(s)	2225
AdeI	CACNNNGTG	1 cut(s)	830
AfaI	GTAC	7 cut(s)	368, 1232, 1276, 1285, 1918, 2292, 2464
AfiI	CCNNNNNNNGG	1 cut(s)	578
AflIII	ACRYGT	2 cut(s)	391, 640
AgsI	TTSAA	7 cut(s)	491, 605, 1859, 1966, 1979, 2090, 2383
AjnI	CCWGG	7 cut(s)	1239, 1470, 2020, 2053, 2320, 2496, 2526
Alw21I	GWGCWC	2 cut(s)	219, 2496
Alw26I	GTCTC	7 cut(s)	80, 256, 1304, 1699, 2130, 2232, 2260
AlwNI	CAGNNNCTG	2 cut(s)	727, 2258
Aor13HI	TCCGGA	2 cut(s)	274, 1462
AoxI	GGCC	5 cut(s)	319, 1159, 2265, 2328, 2524
ApeKI	GCWGC	7 cut(s)	665, 727, 1040, 1371, 1448, 1828, 2438
ApoI	RAATTY	4 cut(s)	942, 1519, 1643, 2047
Asp700I	GAANNNNTTC	2 cut(s)	134, 908
AspLEI	GCGC	2 cut(s)	576, 2538
AspS9I	GGNCC	4 cut(s)	199, 319, 1159, 2328
AsuC2I	CCSGG	1 cut(s)	411
AsuHPI	GGTGA	6 cut(s)	565, 601, 1004, 1333, 1469, 2291
AsuII	TTCGAA	1 cut(s)	1647
AvaII	GGWCC	1 cut(s)	199
BaeI	ACNNNNGTAYC	2 cut(s)	1275, 1308
BalI	TGGCCA	1 cut(s)	2267
BamHI	GGATCC	1 cut(s)	2248
BanI	GGYRCC	1 cut(s)	2543
BanII	GRGCYC	2 cut(s)	219, 2496
BauI	CACGAG	1 cut(s)	212
BbrPI	CACGTG	1 cut(s)	641
BbsI	GAAGAC	1 cut(s)	2463
Bbv12I	GWGCWC	2 cut(s)	219, 2496
BbvI	GCAGC	7 cut(s)	652, 714, 1027, 1383, 1460, 1840, 2425
BccI	CCATC	4 cut(s)	1024, 1069, 1876, 2339
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	7 cut(s)	1241, 1472, 2022, 2055, 2322, 2498, 2528
BclI	TGATCA	1 cut(s)	955
BcnI	CCSGG	1 cut(s)	411
BcoDI	GTCTC	7 cut(s)	80, 256, 1304, 1699, 2130, 2232, 2260
BfaI	CTAG	3 cut(s)	669, 1914, 2366
BfmI	CTRYAG	3 cut(s)	759, 929, 1044
BfuAI	ACCTGC	1 cut(s)	1433
BisI	GCNGC	9 cut(s)	525, 572, 666, 728, 1041, 1372, 1449, 1829, 2439
BlsI	GCNGC	9 cut(s)	526, 573, 667, 729, 1042, 1373, 1450, 1830, 2440
BmcAI	AGTACT	2 cut(s)	1276, 1918
Bme1390I	CCNGG	8 cut(s)	411, 1241, 1472, 2022, 2055, 2322, 2498, 2528
Bme18I	GGWCC	1 cut(s)	199
BmgT120I	GGNCC	4 cut(s)	199, 319, 1159, 2328
BmiI	GGNNCC	5 cut(s)	570, 745, 1638, 2250, 2545
BmrFI	CCNGG	8 cut(s)	411, 1241, 1472, 2022, 2055, 2322, 2498, 2528
BmsI	GCATC	8 cut(s)	174, 337, 1020, 1027, 1042, 1108, 1130, 1562
BpiI	GAAGAC	1 cut(s)	2463
BpmI	CTGGAG	1 cut(s)	1262
Bpu14I	TTCGAA	1 cut(s)	1647
BpuEI	CTTGAG	4 cut(s)	1079, 1098, 1148, 2214
BpuMI	CCSGG	1 cut(s)	411
BsaAI	YACGTR	1 cut(s)	641
BsaHI	GRCGYC	1 cut(s)	2225
BsaI	GGTCTC	1 cut(s)	1699
BsaJI	CCNNGG	5 cut(s)	410, 577, 651, 1389, 2020
BsaWI	WCCGGW	2 cut(s)	274, 1462
BsaXI	ACNNNNNCTCC	4 cut(s)	236, 266, 1965, 1995
Bsc4I	CCNNNNNNNGG	1 cut(s)	578
Bse118I	RCCGGY	2 cut(s)	1890, 2540
Bse1I	ACTGG	4 cut(s)	303, 747, 1638, 2252
Bse3DI	GCAATG	2 cut(s)	864, 2037
BseAI	TCCGGA	2 cut(s)	274, 1462
BseBI	CCWGG	7 cut(s)	1241, 1472, 2022, 2055, 2322, 2498, 2528
BseDI	CCNNGG	5 cut(s)	410, 577, 651, 1389, 2020
BseGI	GGATG	4 cut(s)	1080, 1121, 1231, 1617
BseLI	CCNNNNNNNGG	1 cut(s)	578
BseMI	GCAATG	2 cut(s)	864, 2037
BseMII	CTCAG	2 cut(s)	884, 2006
BseNI	ACTGG	4 cut(s)	303, 747, 1638, 2252
BseRI	GAGGAG	3 cut(s)	45, 230, 1516
BseXI	GCAGC	7 cut(s)	652, 714, 1027, 1383, 1460, 1840, 2425
BseYI	CCCAGC	1 cut(s)	948
BsgI	GTGCAG	3 cut(s)	852, 1467, 2499
Bsh1236I	CGCG	1 cut(s)	574
Bsh1285I	CGRYCG	2 cut(s)	181, 1237
BshFI	GGCC	5 cut(s)	321, 1161, 2267, 2330, 2526
BshNI	GGYRCC	1 cut(s)	2543
BsiEI	CGRYCG	2 cut(s)	181, 1237
BsiHKAI	GWGCWC	2 cut(s)	219, 2496
BsiSI	CCGG	6 cut(s)	255, 275, 410, 1463, 1891, 2541
BslFI	GGGAC	2 cut(s)	595, 1120
BslI	CCNNNNNNNGG	1 cut(s)	578
BsmAI	GTCTC	7 cut(s)	80, 256, 1304, 1699, 2130, 2232, 2260
BsmBI	CGTCTC	2 cut(s)	256, 2232
BsmFI	GGGAC	2 cut(s)	595, 1120
BsmI	GAATGC	2 cut(s)	989, 2203
BsnI	GGCC	5 cut(s)	321, 1161, 2267, 2330, 2526
Bso31I	GGTCTC	1 cut(s)	1699
Bsp119I	TTCGAA	1 cut(s)	1647
Bsp1286I	GDGCHC	2 cut(s)	219, 2496
Bsp13I	TCCGGA	2 cut(s)	274, 1462
Bsp1407I	TGTACA	2 cut(s)	2290, 2462
Bsp19I	CCATGG	2 cut(s)	651, 1389
BspACI	CCGC	5 cut(s)	525, 572, 1530, 2107, 2436
BspANI	GGCC	5 cut(s)	321, 1161, 2267, 2330, 2526
BspCNI	CTCAG	2 cut(s)	883, 2005
BspEI	TCCGGA	2 cut(s)	274, 1462
BspFNI	CGCG	1 cut(s)	574
BspHI	TCATGA	1 cut(s)	2121
BspLI	GGNNCC	5 cut(s)	570, 745, 1638, 2250, 2545
BspMAI	CTGCAG	1 cut(s)	933
BspMI	ACCTGC	1 cut(s)	1433
BspT104I	TTCGAA	1 cut(s)	1647
BspT107I	GGYRCC	1 cut(s)	2543
BspTNI	GGTCTC	1 cut(s)	1699
BsrDI	GCAATG	2 cut(s)	864, 2037
BsrFI	RCCGGY	2 cut(s)	1890, 2540
BsrGI	TGTACA	2 cut(s)	2290, 2462
BsrI	ACTGG	4 cut(s)	303, 747, 1638, 2252
BssAI	RCCGGY	2 cut(s)	1890, 2540
BssECI	CCNNGG	5 cut(s)	410, 577, 651, 1389, 2020
BssNAI	GTATAC	1 cut(s)	621
BssNI	GRCGYC	1 cut(s)	2225
BssSI	CACGAG	1 cut(s)	212
BssT1I	CCWWGG	3 cut(s)	577, 651, 1389
Bst1107I	GTATAC	1 cut(s)	621
Bst2BI	CACGAG	1 cut(s)	212
Bst2UI	CCWGG	7 cut(s)	1241, 1472, 2022, 2055, 2322, 2498, 2528
Bst4CI	ACNGT	9 cut(s)	85, 250, 447, 531, 589, 682, 1360, 2413, 2462
BstACI	GRCGYC	1 cut(s)	2225
BstAPI	GCANNNNNTGC	3 cut(s)	521, 727, 1538
BstAUI	TGTACA	2 cut(s)	2290, 2462
BstBAI	YACGTR	1 cut(s)	641
BstBI	TTCGAA	1 cut(s)	1647
BstC8I	GCNNGC	3 cut(s)	153, 384, 2514
BstDEI	CTNAG	7 cut(s)	870, 938, 1494, 1560, 1992, 2043, 2422
BstDSI	CCRYGG	2 cut(s)	651, 1389
BstF5I	GGATG	4 cut(s)	1080, 1121, 1231, 1617
BstFNI	CGCG	1 cut(s)	574
BstHHI	GCGC	2 cut(s)	576, 2538
BstMAI	GTCTC	7 cut(s)	80, 256, 1304, 1699, 2130, 2232, 2260
BstMCI	CGRYCG	2 cut(s)	181, 1237
BstMWI	GCNNNNNNNGC	9 cut(s)	152, 214, 521, 635, 671, 727, 1448, 1538, 2315
BstNI	CCWGG	7 cut(s)	1241, 1472, 2022, 2055, 2322, 2498, 2528
BstNSI	RCATGY	4 cut(s)	395, 539, 1828, 1954
BstSCI	CCNGG	8 cut(s)	409, 1239, 1470, 2020, 2053, 2320, 2496, 2526
BstSFI	CTRYAG	3 cut(s)	759, 929, 1044
BstUI	CGCG	1 cut(s)	574
BstV1I	GCAGC	7 cut(s)	652, 714, 1027, 1383, 1460, 1840, 2425
BstV2I	GAAGAC	1 cut(s)	2463
BstX2I	RGATCY	4 cut(s)	1109, 2057, 2248, 2385
BstXI	CCANNNNNNTGG	1 cut(s)	2321
BstYI	RGATCY	4 cut(s)	1109, 2057, 2248, 2385
BstZ17I	GTATAC	1 cut(s)	621
BsuRI	GGCC	5 cut(s)	321, 1161, 2267, 2330, 2526
BtgI	CCRYGG	2 cut(s)	651, 1389
BtgZI	GCGATG	1 cut(s)	2317
BtsCI	GGATG	4 cut(s)	1080, 1121, 1231, 1617
BtsI	GCAGTG	2 cut(s)	645, 1216
BtsIMutI	CAGTG	7 cut(s)	90, 329, 645, 754, 1216, 1631, 2516
BveI	ACCTGC	1 cut(s)	1433
Cac8I	GCNNGC	3 cut(s)	153, 384, 2514
CaiI	CAGNNNCTG	2 cut(s)	727, 2258
CciI	TCATGA	1 cut(s)	2121
CfoI	GCGC	2 cut(s)	576, 2538
Cfr10I	RCCGGY	2 cut(s)	1890, 2540
Cfr13I	GGNCC	4 cut(s)	199, 319, 1159, 2328
CseI	GACGC	1 cut(s)	2214
Csp6I	GTAC	7 cut(s)	367, 1231, 1275, 1284, 1917, 2291, 2463
CviAII	CATG	9 cut(s)	290, 371, 392, 536, 652, 1390, 1825, 1951, 2122
CviQI	GTAC	7 cut(s)	367, 1231, 1275, 1284, 1917, 2291, 2463
DdeI	CTNAG	7 cut(s)	870, 938, 1494, 1560, 1992, 2043, 2422
DraIII	CACNNNGTG	1 cut(s)	830
EaeI	YGGCCR	1 cut(s)	2265
Ecl136II	GAGCTC	2 cut(s)	217, 2494
Eco130I	CCWWGG	3 cut(s)	577, 651, 1389
Eco147I	AGGCCT	1 cut(s)	2526
Eco24I	GRGCYC	2 cut(s)	219, 2496
Eco31I	GGTCTC	1 cut(s)	1699
Eco32I	GATATC	1 cut(s)	977
Eco47I	GGWCC	1 cut(s)	199
Eco53kI	GAGCTC	2 cut(s)	217, 2494
Eco57I	CTGAAG	6 cut(s)	489, 1473, 1584, 1860, 2166, 2375
Eco72I	CACGTG	1 cut(s)	641
EcoICRI	GAGCTC	2 cut(s)	217, 2494
EcoO109I	RGGNCCY	1 cut(s)	1159
EcoRI	GAATTC	3 cut(s)	942, 1519, 1643
EcoRII	CCWGG	7 cut(s)	1239, 1470, 2020, 2053, 2320, 2496, 2526
EcoRV	GATATC	1 cut(s)	977
EcoT14I	CCWWGG	3 cut(s)	577, 651, 1389
EcoT22I	ATGCAT	2 cut(s)	989, 1123
EcoT38I	GRGCYC	2 cut(s)	219, 2496
ErhI	CCWWGG	3 cut(s)	577, 651, 1389
Esp3I	CGTCTC	2 cut(s)	256, 2232
FaeI	CATG	9 cut(s)	293, 374, 395, 539, 655, 1393, 1828, 1954, 2125
FalI	AAGNNNNNCTT	4 cut(s)	585, 617, 1041, 1073
FaqI	GGGAC	2 cut(s)	595, 1120
FatI	CATG	9 cut(s)	289, 370, 391, 535, 651, 1389, 1824, 1950, 2121
FauI	CCCGC	1 cut(s)	2100
FbaI	TGATCA	1 cut(s)	955
FblI	GTMKAC	1 cut(s)	620
Fnu4HI	GCNGC	9 cut(s)	525, 572, 666, 728, 1041, 1372, 1449, 1829, 2439
FokI	GGATG	4 cut(s)	1087, 1108, 1238, 1624
FriOI	GRGCYC	2 cut(s)	219, 2496
Fsp4HI	GCNGC	9 cut(s)	525, 572, 666, 728, 1041, 1372, 1449, 1829, 2439
FspBI	CTAG	3 cut(s)	669, 1914, 2366
FspI	TGCGCA	1 cut(s)	2537
GlaI	GCGC	2 cut(s)	575, 2537
GluI	GCNGC	9 cut(s)	525, 572, 666, 728, 1041, 1372, 1449, 1829, 2439
GsaI	CCCAGC	1 cut(s)	952
GsuI	CTGGAG	1 cut(s)	1262
HaeIII	GGCC	5 cut(s)	321, 1161, 2267, 2330, 2526
HapII	CCGG	6 cut(s)	255, 275, 410, 1463, 1891, 2541
HgaI	GACGC	1 cut(s)	2214
HhaI	GCGC	2 cut(s)	576, 2538
Hin1I	GRCGYC	1 cut(s)	2225
Hin1II	CATG	9 cut(s)	293, 374, 395, 539, 655, 1393, 1828, 1954, 2125
Hin6I	GCGC	2 cut(s)	574, 2536
HinP1I	GCGC	2 cut(s)	574, 2536
HindIII	AAGCTT	5 cut(s)	206, 935, 1842, 2091, 2171
HpaII	CCGG	6 cut(s)	255, 275, 410, 1463, 1891, 2541
HphI	GGTGA	6 cut(s)	565, 601, 1004, 1333, 1469, 2291
Hpy166II	GTNNAC	4 cut(s)	621, 1231, 1752, 2159
Hpy8I	GTNNAC	4 cut(s)	621, 1231, 1752, 2159
Hpy99I	CGWCG	4 cut(s)	113, 191, 194, 467
HpyCH4III	ACNGT	9 cut(s)	85, 250, 447, 531, 589, 682, 1360, 2413, 2462
HpyCH4IV	ACGT	4 cut(s)	17, 186, 640, 924
HpyF10VI	GCNNNNNNNGC	9 cut(s)	152, 214, 521, 635, 671, 727, 1448, 1538, 2315
HpyF3I	CTNAG	7 cut(s)	870, 938, 1494, 1560, 1992, 2043, 2422
HpySE526I	ACGT	4 cut(s)	17, 186, 640, 924
Hsp92I	GRCGYC	1 cut(s)	2225
Hsp92II	CATG	9 cut(s)	293, 374, 395, 539, 655, 1393, 1828, 1954, 2125
HspAI	GCGC	2 cut(s)	574, 2536
Kpn2I	TCCGGA	2 cut(s)	274, 1462
Ksp22I	TGATCA	1 cut(s)	955
LmnI	GCTCC	7 cut(s)	222, 568, 743, 1068, 1439, 2491, 2499
Lsp1109I	GCAGC	7 cut(s)	652, 714, 1027, 1383, 1460, 1840, 2425
LweI	GCATC	8 cut(s)	174, 337, 1020, 1027, 1042, 1108, 1130, 1562
MaeI	CTAG	3 cut(s)	669, 1914, 2366
MaeII	ACGT	4 cut(s)	17, 186, 640, 924
MaeIII	GTNAC	7 cut(s)	58, 553, 643, 997, 1322, 1364, 2413
MfeI	CAATTG	3 cut(s)	281, 614, 882
MflI	RGATCY	4 cut(s)	1109, 2057, 2248, 2385
MhlI	GDGCHC	2 cut(s)	219, 2496
MlsI	TGGCCA	1 cut(s)	2267
MluNI	TGGCCA	1 cut(s)	2267
MlyI	GAGTC	6 cut(s)	13, 82, 149, 1469, 1538, 1820
MmeI	TCCRAC	2 cut(s)	546, 2166
Mox20I	TGGCCA	1 cut(s)	2267
Mph1103I	ATGCAT	2 cut(s)	989, 1123
MroI	TCCGGA	2 cut(s)	274, 1462
MroXI	GAANNNNTTC	2 cut(s)	134, 908
MscI	TGGCCA	1 cut(s)	2267
MseI	TTAA	6 cut(s)	789, 1820, 1901, 1941, 2016, 2132
MslI	CAYNNNNRTG	1 cut(s)	650
Msp20I	TGGCCA	1 cut(s)	2267
MspA1I	CMGCKG	2 cut(s)	1451, 2438
MspI	CCGG	6 cut(s)	255, 275, 410, 1463, 1891, 2541
MspR9I	CCNGG	8 cut(s)	411, 1241, 1472, 2022, 2055, 2322, 2498, 2528
MunI	CAATTG	3 cut(s)	281, 614, 882
Mva1269I	GAATGC	2 cut(s)	989, 2203
MvaI	CCWGG	7 cut(s)	1241, 1472, 2022, 2055, 2322, 2498, 2528
MvnI	CGCG	1 cut(s)	574
MwoI	GCNNNNNNNGC	9 cut(s)	152, 214, 521, 635, 671, 727, 1448, 1538, 2315
NciI	CCSGG	1 cut(s)	411
NcoI	CCATGG	2 cut(s)	651, 1389
NlaIII	CATG	9 cut(s)	293, 374, 395, 539, 655, 1393, 1828, 1954, 2125
NlaIV	GGNNCC	5 cut(s)	570, 745, 1638, 2250, 2545
NmeAIII	GCCGAG	1 cut(s)	2329
NmuCI	GTSAC	5 cut(s)	58, 553, 643, 1322, 1364
NsbI	TGCGCA	1 cut(s)	2537
NsiI	ATGCAT	2 cut(s)	989, 1123
NspI	RCATGY	4 cut(s)	395, 539, 1828, 1954
NspV	TTCGAA	1 cut(s)	1647
PagI	TCATGA	1 cut(s)	2121
PaqCI	CACCTGC	1 cut(s)	1433
PceI	AGGCCT	1 cut(s)	2526
PciI	ACATGT	1 cut(s)	391
PctI	GAATGC	2 cut(s)	989, 2203
PdmI	GAANNNNTTC	2 cut(s)	134, 908
PfoI	TCCNGGA	2 cut(s)	2053, 2496
PkrI	GCNGC	9 cut(s)	526, 573, 667, 729, 1042, 1373, 1450, 1830, 2440
Ple19I	CGATCG	2 cut(s)	181, 1237
PleI	GAGTC	6 cut(s)	12, 81, 148, 1469, 1538, 1819
PmaCI	CACGTG	1 cut(s)	641
PmlI	CACGTG	1 cut(s)	641
PpsI	GAGTC	6 cut(s)	12, 81, 148, 1469, 1538, 1819
Ppu21I	YACGTR	1 cut(s)	641
PscI	ACATGT	1 cut(s)	391
Psp124BI	GAGCTC	2 cut(s)	219, 2496
Psp6I	CCWGG	7 cut(s)	1239, 1470, 2020, 2053, 2320, 2496, 2526
PspCI	CACGTG	1 cut(s)	641
PspFI	CCCAGC	1 cut(s)	948
PspGI	CCWGG	7 cut(s)	1239, 1470, 2020, 2053, 2320, 2496, 2526
PspN4I	GGNNCC	5 cut(s)	570, 745, 1638, 2250, 2545
PspPI	GGNCC	4 cut(s)	199, 319, 1159, 2328
PstI	CTGCAG	1 cut(s)	933
PstNI	CAGNNNCTG	2 cut(s)	727, 2258
PsuI	RGATCY	4 cut(s)	1109, 2057, 2248, 2385
PvuI	CGATCG	2 cut(s)	181, 1237
PvuII	CAGCTG	1 cut(s)	1451
RsaI	GTAC	7 cut(s)	368, 1232, 1276, 1285, 1918, 2292, 2464
RsaNI	GTAC	7 cut(s)	367, 1231, 1275, 1284, 1917, 2291, 2463
RseI	CAYNNNNRTG	1 cut(s)	650
SacI	GAGCTC	2 cut(s)	219, 2496
SaqAI	TTAA	6 cut(s)	789, 1820, 1901, 1941, 2016, 2132
SatI	GCNGC	9 cut(s)	525, 572, 666, 728, 1041, 1372, 1449, 1829, 2439
Sau96I	GGNCC	4 cut(s)	199, 319, 1159, 2328
ScaI	AGTACT	2 cut(s)	1276, 1918
SchI	GAGTC	6 cut(s)	13, 82, 149, 1469, 1538, 1820
ScrFI	CCNGG	8 cut(s)	411, 1241, 1472, 2022, 2055, 2322, 2498, 2528
SduI	GDGCHC	2 cut(s)	219, 2496
SfaNI	GCATC	8 cut(s)	174, 337, 1020, 1027, 1042, 1108, 1130, 1562
SfcI	CTRYAG	3 cut(s)	759, 929, 1044
SfuI	TTCGAA	1 cut(s)	1647
SinI	GGWCC	1 cut(s)	199
SmiMI	CAYNNNNRTG	1 cut(s)	650
SmlI	CTYRAG	4 cut(s)	1058, 1113, 1163, 2229
SmoI	CTYRAG	4 cut(s)	1058, 1113, 1163, 2229
SseBI	AGGCCT	1 cut(s)	2526
SsiI	CCGC	5 cut(s)	525, 572, 1530, 2107, 2436
SspI	AATATT	1 cut(s)	2478
SspMI	CTAG	3 cut(s)	669, 1914, 2366
SstI	GAGCTC	2 cut(s)	219, 2496
StuI	AGGCCT	1 cut(s)	2526
StyD4I	CCNGG	8 cut(s)	409, 1239, 1470, 2020, 2053, 2320, 2496, 2526
StyI	CCWWGG	3 cut(s)	577, 651, 1389
TaaI	ACNGT	9 cut(s)	85, 250, 447, 531, 589, 682, 1360, 2413, 2462
TaiI	ACGT	4 cut(s)	20, 189, 643, 927
TatI	WGTACW	4 cut(s)	1274, 1916, 2290, 2462
TauI	GCSGC	2 cut(s)	527, 574
Tru1I	TTAA	6 cut(s)	789, 1820, 1901, 1941, 2016, 2132
Tru9I	TTAA	6 cut(s)	789, 1820, 1901, 1941, 2016, 2132
TscAI	CASTG	7 cut(s)	90, 336, 652, 754, 1216, 1638, 2523
TseFI	GTSAC	5 cut(s)	58, 553, 643, 1322, 1364
TseI	GCWGC	7 cut(s)	665, 727, 1040, 1371, 1448, 1828, 2438
Tsp45I	GTSAC	5 cut(s)	58, 553, 643, 1322, 1364
TspGWI	ACGGA	3 cut(s)	40, 46, 451
TspRI	CASTG	7 cut(s)	90, 336, 652, 754, 1216, 1638, 2523
VpaK11BI	GGWCC	1 cut(s)	199
XapI	RAATTY	4 cut(s)	942, 1519, 1643, 2047
XceI	RCATGY	4 cut(s)	395, 539, 1828, 1954
XmiI	GTMKAC	1 cut(s)	620
XmnI	GAANNNNTTC	2 cut(s)	134, 908
XspI	CTAG	3 cut(s)	669, 1914, 2366
ZrmI	AGTACT	2 cut(s)	1276, 1918
Zsp2I	ATGCAT	2 cut(s)	989, 1123

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.