Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0007320

Physical Location & Seq

Genomic Coordinates Forward (+)

6776502 .. 6784194

Gene Structure 7693 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g08380.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2616 bp

ATGTCGAGGCGGCTGCGGAAGATGGTCCCCTCACTCGTCCTGCCCAGGAAACCTGTTTTTGCGAGAAACGGATGTACGAGAGCATTCGGGTCGAAAGGTCCAACGAGAGCAAAAGCGCGAACAAAACCTCTCTCTGGACCCGGAGACTCGGAAAGTGATCCGAAAATGGACGACGAATTGCTGGAATTGCAGAGGCAATTCGAGTTCGCACAGCAAGCGAAATCGAGCATCAGATTATCCGATCGAAACGTCGTCGAATTGGTCCAGAAGCTTCAGGAGCTCCACATCATCGACTTCGAGCTCCTCCACACCGTCACCGGCAAAGAATACATTACTCCCGATCAATTGAGGAACGAAATATCGGCGGAGGTCAGTAAACTAGGGCGTGTTTCGTTGATTGACCTTGCGGACACTACAGGAGTGGATTTGTATCATGTTGAGAAGCAAGCTCAGCATGTTGTTTTGGATGATCCGGGGCTTATGTTGATTCAAGGCGAAATAATATCACAGTCTTATTGGGATTCTGTCGCCGAAGAAGTCAATGACAGGCTTCAAGAGTGTAGCCAAATCGCTTTGGCAGAACTTGCCGCGCAGTTGCATGTCAGTTCGGAAATGGTGGCATCTGTGTTGGAGCCCCGCCTTGGGACTTTGGTGAAAGGTAGGCTTGAAGGTGGGCAGTTGTATACTCCTGCATATGTCGCACGGGTTACTGCCATGGTTCGTGGTGCTGCCAGAGGTATCGCAGTTCCCACAAACTTATCATTGTTGTGGAGTTCGTTACAGCAGCTGTTGCAAGAAATGGATGGAGCCAGTGGAGTGGCTGTAGAAGGTTCATTTTTCCAGTCCCTGTTTAATGGACTTGTAAAGGAAGGCGAAATTCTTGGATCACTTCGTGCAGGAGTTCATTGGACACCTAATGTCTTTGCCATTGCTCAAAAGGAATCAATTGATTCTTTCTTTTCACAGAATTCTTTCATTAACTATGATGTTCTGCACAAACTTAGAATTCCTCAGCCCATTCAGTTCTTGCAGTCCAGATATCCAGAAGGCATACCTTTGGTTACTACATTTGTTCACCCCTCAATGATTGAGATGCTTGATGCTGCTACAGAAGATGCTCTCGAACGTGATAGCTGGATCGATTCTCTTTCTATACTCCCAATGTCCTTTGGGTCTCAGGATGCATCTAAACTTTTGTCCCTTTGCCCTTCCATTCAGCAGGGTCTCAAGTCTGATAAAGCAATAATCTTCAGGGAGTCATATGTATTTAGCAGCGGCTTTATCAAGGATGTGTATGATCGCCTCAAGAAAGAAATGGAAACCTTTAGTGTTTCAGTTCCTTCCAGTACTGTGGTGTCAGATGATTTGCGGGAGACAAAAGTTGGTCATGACACAAGCAGGTCGACTGAGTCCAATGAAACTGTTAGTGACAGCAGCAGTAATAAACAGGCAACGGAGAAGGGATCAAAAAAGAAAAAAGGTAGAGGGGCTGGAAGCATGATAACAGGGCCAGCTGAGAGTGAGCTGGACAACCAGGACAATGTTCCTACGAAATCTAAGAAAAACCAAAGGAAAGGCAAGAATACCTCTTCCGGACAGGCCTCAGAGTCAAAAGCAGCTGCTAAGTTGGTAAAAATAAAAGAGGAAAATCTCAATGTCCCTTCAGAAGATTGGGTAATGAATAAGATTACAGCGCTTGTACCTGATTTTGAAGAACAAGGTCCTGACGATCCCCAAACAATTCTTGGACCTTTGGCACACTATTTGAGGCCTAAGTTAATCAACTCCTGGAAGGAGAGAAGAAAGGCGTTGTTTACAGAAAATGCGGAGAGAATGAGGAACTTACTTGATAACTTGCAAAAGAAACTTGATGAGTCTTTCTTAAATATGCAGCTTTATGAAAAGGCTTTAGATTTGTTTGAAGATGACCAATCAACCTCAGTCATTTTTCACCGGCATCTGTTAAGAACAACAGCTACTACTATTGCCGATATGCTTCTTCAAAATTTGGACATGCACAACAAATTGAAGAATGGAGTTGAAGTTGCAGAGCCTCAAATTTCAGAATCTATTTCCCTCAACGCAGGAGAGAGAACTTCCATTGCCAAAAACTTTCCTGGATCTCTTTCAAGCAAGGCTCTTGCTGTAGTTGAAGCATTGGAAGGAAAGCGGGTGGAAACTTTCATGACTGCTCTAAGAGATATTGCAGAAGAGAGCGGCTTGCTCTTGAGAAAGCTTGACAAGAAATTGGAAAGAACGCTTCTGCATTCATATCAGAAGGATTTGGTGTCTCAAGTTTCTGCTGAGACCGATCCAGTTCCTCTTTTGCCAAAAGTTGTCTCCCTGATTTACGTACAGGTTCACCATAAAGCTCTTCAAGCACCTGGAAGGGCCATCGCTGTCGCTGTTTCACGGCTGAAGGATAAACTAGATGAATCAGCCTTCAAGATCCTGACGGATTATCAAACTGCAACAGTGACCCTGTTAACGTTAATATCTGCTGCAAGTGGAGACGAAGAAGATTGTTCATCGGATAGAATTTTGAGCAAAAGGGAGCTTTTGGAGACCCAAATGCCCGCACTCAAAGGCCTGGTCTTGCGCAACTCACAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

E3_UFM1_ligase

Protein Analysis

872

Amino Acids

96.5

Weight (kDa)

5.94

Isoelectric Point (pI)

44.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46220 AT3G46220 AT3G46220 AT3G46220
fragaria_vesca	FvH4_3g34630 FvH4_3g34630 FvH4_3g34630 FvH4_3g34630 FvH4_3g34630
malus_domestica	MD03G1103200.v1.1 MD11G1116800.v1.1
prunus_persica	Prupe.6G087200_v2.0.a1 Prupe.6G087200_v2.0.a1
pyrus_communis	pycom03g08380 pycom11g09820
rosa_chinensis	RchiOBHm_Chr5g0062341
rosa_laevigata	RLG00000035551
rosa_multiflora	Rmu_co8354903.1_g000001 Rmu_sc0006295.1_g000003
rosa_roxburghii	Rroxscaffold_1G00018340
rosa_rugosa	Rorug05G0348800
rosa_samantha	Rh5BG422200 Rh5CG446200 Rh5DG437200
rosa_wichuraiana	Rw5G038490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2600
Acc36I	ACCTGC	1 cut(s)	1389
AccBSI	CCGCTC	1 cut(s)	2217
AccI	GTMKAC	2 cut(s)	683, 1403
AccII	CGCG	2 cut(s)	118, 590
AccIII	TCCGGA	1 cut(s)	1592
AclI	AACGTT	1 cut(s)	2489
AclWI	GGATC	9 cut(s)	152, 464, 892, 1145, 1471, 1724, 2128, 2306, 2443
AcsI	RAATTY	6 cut(s)	876, 967, 1005, 2005, 2058, 2538
AcuI	CTGAAG	4 cut(s)	257, 1234, 1647, 2438
AdeI	CACNNNGTG	1 cut(s)	893
AfaI	GTAC	4 cut(s)	76, 1348, 1701, 2355
AfeI	AGCGCT	1 cut(s)	1695
AfiI	CCNNNNNNNGG	3 cut(s)	134, 641, 642
AjnI	CCWGG	6 cut(s)	44, 1533, 1787, 2116, 2383, 2589
Alw21I	GWGCWC	2 cut(s)	282, 303
Alw26I	GTCTC	9 cut(s)	138, 1179, 1229, 1367, 2295, 2300, 2344, 2505, 2558
AlwI	GGATC	9 cut(s)	152, 464, 892, 1145, 1471, 1724, 2128, 2306, 2443
AlwNI	CAGNNNCTG	2 cut(s)	787, 847
Aor13HI	TCCGGA	1 cut(s)	1592
Aor51HI	AGCGCT	1 cut(s)	1695
AoxI	GGCC	5 cut(s)	1508, 1599, 1769, 2391, 2587
ApoI	RAATTY	6 cut(s)	876, 967, 1005, 2005, 2058, 2538
ArsI	GACNNNNNNTTYG	2 cut(s)	2577, 2609
Asp700I	GAANNNNTTC	1 cut(s)	971
AspLEI	GCGC	4 cut(s)	118, 592, 1696, 2601
AspS9I	GGNCC	8 cut(s)	25, 98, 137, 262, 1508, 1721, 1748, 2391
AsuC2I	CCSGG	2 cut(s)	141, 474
AsuHPI	GGTGA	5 cut(s)	307, 664, 1067, 1943, 2354
AvaII	GGWCC	6 cut(s)	25, 98, 137, 262, 1721, 1748
BanII	GRGCYC	3 cut(s)	282, 303, 636
Bbv12I	GWGCWC	2 cut(s)	282, 303
BbvCI	CCTCAGC	1 cut(s)	1011
BbvI	GCAGC	9 cut(s)	715, 796, 1090, 1284, 1446, 1606, 1628, 1903, 2488
BccI	CCATC	3 cut(s)	16, 797, 2402
BceAI	ACGGC	1 cut(s)	2429
BcgI	CGANNNNNNTGC	3 cut(s)	29, 72, 106
BciT130I	CCWGG	6 cut(s)	46, 1535, 1789, 2118, 2385, 2591
BcnI	CCSGG	2 cut(s)	141, 474
BcoDI	GTCTC	9 cut(s)	138, 1179, 1229, 1367, 2295, 2300, 2344, 2505, 2558
BfaI	CTAG	2 cut(s)	380, 2429
BfmI	CTRYAG	4 cut(s)	414, 822, 1107, 2145
BfoI	RGCGCY	1 cut(s)	1697
BfuAI	ACCTGC	1 cut(s)	1389
BlpI	GCTNAGC	1 cut(s)	450
BmcAI	AGTACT	1 cut(s)	1348
Bme1390I	CCNGG	8 cut(s)	46, 141, 474, 1535, 1789, 2118, 2385, 2591
Bme18I	GGWCC	6 cut(s)	25, 98, 137, 262, 1721, 1748
BmgT120I	GGNCC	8 cut(s)	25, 98, 137, 262, 1508, 1721, 1748, 2391
BmiI	GGNNCC	4 cut(s)	27, 139, 633, 808
BmrFI	CCNGG	8 cut(s)	46, 141, 474, 1535, 1789, 2118, 2385, 2591
BmsI	GCATC	8 cut(s)	237, 629, 1083, 1090, 1105, 1171, 1193, 1966
Bpu10I	CCTNAGC	1 cut(s)	1011
Bpu1102I	GCTNAGC	1 cut(s)	450
BpuEI	CTTGAG	4 cut(s)	1211, 1289, 2248, 2277
BpuMI	CCSGG	2 cut(s)	141, 474
Bsa29I	ATCGAT	1 cut(s)	1140
BsaAI	YACGTR	1 cut(s)	2353
BsaBI	GATNNNNATC	1 cut(s)	429
BsaI	GGTCTC	4 cut(s)	1179, 1229, 2300, 2558
BsaJI	CCNNGG	4 cut(s)	44, 473, 640, 714
BsaWI	WCCGGW	1 cut(s)	1592
BsaXI	ACNNNNNCTCC	4 cut(s)	807, 837, 2028, 2058
Bsc4I	CCNNNNNNNGG	3 cut(s)	134, 641, 642
Bse118I	RCCGGY	2 cut(s)	317, 1953
Bse1I	ACTGG	4 cut(s)	810, 841, 1344, 2315
Bse3DI	GCAATG	2 cut(s)	927, 2100
Bse8I	GATNNNNATC	1 cut(s)	429
BseAI	TCCGGA	1 cut(s)	1592
BseBI	CCWGG	6 cut(s)	46, 1535, 1789, 2118, 2385, 2591
BseCI	ATCGAT	1 cut(s)	1140
BseDI	CCNNGG	4 cut(s)	44, 473, 640, 714
BseGI	GGATG	5 cut(s)	77, 472, 808, 1186, 1294
BseJI	GATNNNNATC	1 cut(s)	429
BseLI	CCNNNNNNNGG	3 cut(s)	134, 641, 642
BseMI	GCAATG	2 cut(s)	927, 2100
BseMII	CTCAG	8 cut(s)	464, 1025, 1190, 1398, 1506, 1617, 1953, 2295
BseNI	ACTGG	4 cut(s)	810, 841, 1344, 2315
BseRI	GAGGAG	1 cut(s)	293
BseXI	GCAGC	9 cut(s)	715, 796, 1090, 1284, 1446, 1606, 1628, 1903, 2488
BsgI	GTGCAG	2 cut(s)	915, 977
Bsh1236I	CGCG	2 cut(s)	118, 590
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	5 cut(s)	1510, 1601, 1771, 2393, 2589
BshVI	ATCGAT	1 cut(s)	1140
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	2 cut(s)	282, 303
BsiSI	CCGG	5 cut(s)	141, 318, 473, 1593, 1954
BslFI	GGGAC	5 cut(s)	11, 658, 829, 1183, 1643
BslI	CCNNNNNNNGG	3 cut(s)	134, 641, 642
BsmAI	GTCTC	9 cut(s)	138, 1179, 1229, 1367, 2295, 2300, 2344, 2505, 2558
BsmBI	CGTCTC	1 cut(s)	2505
BsmFI	GGGAC	5 cut(s)	11, 658, 829, 1183, 1643
BsmI	GAATGC	2 cut(s)	83, 2266
BsnI	GGCC	5 cut(s)	1510, 1601, 1771, 2393, 2589
Bso31I	GGTCTC	4 cut(s)	1179, 1229, 2300, 2558
Bsp1286I	GDGCHC	3 cut(s)	282, 303, 636
Bsp13I	TCCGGA	1 cut(s)	1592
Bsp1720I	GCTNAGC	1 cut(s)	450
Bsp19I	CCATGG	1 cut(s)	714
BspANI	GGCC	5 cut(s)	1510, 1601, 1771, 2393, 2589
BspCNI	CTCAG	8 cut(s)	463, 1024, 1189, 1399, 1507, 1616, 1952, 2296
BspDI	ATCGAT	1 cut(s)	1140
BspEI	TCCGGA	1 cut(s)	1592
BspFNI	CGCG	2 cut(s)	118, 590
BspHI	TCATGA	2 cut(s)	1387, 2184
BspLI	GGNNCC	4 cut(s)	27, 139, 633, 808
BspMI	ACCTGC	1 cut(s)	1389
BspPI	GGATC	9 cut(s)	152, 464, 892, 1145, 1471, 1724, 2128, 2306, 2443
BspQI	GCTCTTC	1 cut(s)	2379
BspTNI	GGTCTC	4 cut(s)	1179, 1229, 2300, 2558
BsrBI	CCGCTC	1 cut(s)	2217
BsrDI	GCAATG	2 cut(s)	927, 2100
BsrFI	RCCGGY	2 cut(s)	317, 1953
BsrI	ACTGG	4 cut(s)	810, 841, 1344, 2315
BssAI	RCCGGY	2 cut(s)	317, 1953
BssECI	CCNNGG	4 cut(s)	44, 473, 640, 714
BssNAI	GTATAC	1 cut(s)	684
BssT1I	CCWWGG	2 cut(s)	640, 714
Bst1107I	GTATAC	1 cut(s)	684
Bst2UI	CCWGG	6 cut(s)	46, 1535, 1789, 2118, 2385, 2591
Bst4CI	ACNGT	5 cut(s)	313, 510, 1351, 1423, 2476
Bst6I	CTCTTC	3 cut(s)	1594, 2205, 2379
BstAPI	GCANNNNNTGC	2 cut(s)	584, 790
BstBAI	YACGTR	1 cut(s)	2353
BstC8I	GCNNGC	5 cut(s)	216, 447, 1512, 2222, 2577
BstDSI	CCRYGG	1 cut(s)	714
BstF5I	GGATG	5 cut(s)	77, 472, 808, 1186, 1294
BstFNI	CGCG	2 cut(s)	118, 590
BstH2I	RGCGCY	1 cut(s)	1697
BstHHI	GCGC	4 cut(s)	118, 592, 1696, 2601
BstMAI	GTCTC	9 cut(s)	138, 1179, 1229, 1367, 2295, 2300, 2344, 2505, 2558
BstMCI	CGRYCG	1 cut(s)	244
BstMWI	GCNNNNNNNGC	8 cut(s)	187, 215, 277, 451, 584, 698, 790, 2378
BstNI	CCWGG	6 cut(s)	46, 1535, 1789, 2118, 2385, 2591
BstNSI	RCATGY	3 cut(s)	458, 602, 2017
BstSCI	CCNGG	8 cut(s)	44, 139, 472, 1533, 1787, 2116, 2383, 2589
BstSFI	CTRYAG	4 cut(s)	414, 822, 1107, 2145
BstSNI	TACGTA	1 cut(s)	2353
BstUI	CGCG	2 cut(s)	118, 590
BstV1I	GCAGC	9 cut(s)	715, 796, 1090, 1284, 1446, 1606, 1628, 1903, 2488
BstX2I	RGATCY	2 cut(s)	2120, 2448
BstXI	CCANNNNNNTGG	2 cut(s)	817, 1351
BstYI	RGATCY	2 cut(s)	2120, 2448
BstZ17I	GTATAC	1 cut(s)	684
Bsu15I	ATCGAT	1 cut(s)	1140
BsuRI	GGCC	5 cut(s)	1510, 1601, 1771, 2393, 2589
BsuTUI	ATCGAT	1 cut(s)	1140
BtgI	CCRYGG	1 cut(s)	714
BtgZI	GCGATG	1 cut(s)	2380
BtsCI	GGATG	5 cut(s)	77, 472, 808, 1186, 1294
BtsIMutI	CAGTG	2 cut(s)	817, 2481
BveI	ACCTGC	1 cut(s)	1389
Cac8I	GCNNGC	5 cut(s)	216, 447, 1512, 2222, 2577
CaiI	CAGNNNCTG	2 cut(s)	787, 847
CciI	TCATGA	2 cut(s)	1387, 2184
CfoI	GCGC	4 cut(s)	118, 592, 1696, 2601
Cfr10I	RCCGGY	2 cut(s)	317, 1953
Cfr13I	GGNCC	8 cut(s)	25, 98, 137, 262, 1508, 1721, 1748, 2391
ClaI	ATCGAT	1 cut(s)	1140
Csp6I	GTAC	4 cut(s)	75, 1347, 1700, 2354
CviAII	CATG	8 cut(s)	434, 455, 599, 715, 1388, 1498, 2014, 2185
CviQI	GTAC	4 cut(s)	75, 1347, 1700, 2354
DraIII	CACNNNGTG	1 cut(s)	893
Eam1104I	CTCTTC	3 cut(s)	1594, 2205, 2379
EarI	CTCTTC	3 cut(s)	1594, 2205, 2379
EciI	GGCGGA	1 cut(s)	380
Ecl136II	GAGCTC	2 cut(s)	280, 301
Eco105I	TACGTA	1 cut(s)	2353
Eco130I	CCWWGG	2 cut(s)	640, 714
Eco147I	AGGCCT	3 cut(s)	1601, 1771, 2589
Eco24I	GRGCYC	3 cut(s)	282, 303, 636
Eco31I	GGTCTC	4 cut(s)	1179, 1229, 2300, 2558
Eco32I	GATATC	1 cut(s)	1040
Eco47I	GGWCC	6 cut(s)	25, 98, 137, 262, 1721, 1748
Eco47III	AGCGCT	1 cut(s)	1695
Eco53kI	GAGCTC	2 cut(s)	280, 301
Eco57I	CTGAAG	4 cut(s)	257, 1234, 1647, 2438
EcoICRI	GAGCTC	2 cut(s)	280, 301
EcoO109I	RGGNCCY	1 cut(s)	1721
EcoRI	GAATTC	2 cut(s)	967, 1005
EcoRII	CCWGG	6 cut(s)	44, 1533, 1787, 2116, 2383, 2589
EcoRV	GATATC	1 cut(s)	1040
EcoT14I	CCWWGG	2 cut(s)	640, 714
EcoT22I	ATGCAT	1 cut(s)	1186
EcoT38I	GRGCYC	3 cut(s)	282, 303, 636
ErhI	CCWWGG	2 cut(s)	640, 714
Esp3I	CGTCTC	1 cut(s)	2505
FaeI	CATG	8 cut(s)	437, 458, 602, 718, 1391, 1501, 2017, 2188
FalI	AAGNNNNNCTT	2 cut(s)	648, 680
FaqI	GGGAC	5 cut(s)	11, 658, 829, 1183, 1643
FatI	CATG	8 cut(s)	433, 454, 598, 714, 1387, 1497, 2013, 2184
FauI	CCCGC	4 cut(s)	644, 1362, 2163, 2584
FauNDI	CATATG	2 cut(s)	694, 1261
FblI	GTMKAC	2 cut(s)	683, 1403
FokI	GGATG	5 cut(s)	84, 479, 815, 1193, 1301
FriOI	GRGCYC	3 cut(s)	282, 303, 636
FspBI	CTAG	2 cut(s)	380, 2429
FspI	TGCGCA	1 cut(s)	2600
GlaI	GCGC	4 cut(s)	117, 591, 1695, 2600
HaeII	RGCGCY	1 cut(s)	1697
HaeIII	GGCC	5 cut(s)	1510, 1601, 1771, 2393, 2589
HapII	CCGG	5 cut(s)	141, 318, 473, 1593, 1954
HhaI	GCGC	4 cut(s)	118, 592, 1696, 2601
Hin1II	CATG	8 cut(s)	437, 458, 602, 718, 1391, 1501, 2017, 2188
Hin6I	GCGC	4 cut(s)	116, 590, 1694, 2599
HinP1I	GCGC	4 cut(s)	116, 590, 1694, 2599
HincII	GTYRAC	2 cut(s)	1404, 2487
HindII	GTYRAC	2 cut(s)	1404, 2487
HindIII	AAGCTT	2 cut(s)	269, 2234
HpaI	GTTAAC	1 cut(s)	2487
HpaII	CCGG	5 cut(s)	141, 318, 473, 1593, 1954
HphI	GGTGA	5 cut(s)	307, 664, 1067, 1943, 2354
Hpy166II	GTNNAC	7 cut(s)	377, 684, 1075, 1404, 1815, 2362, 2487
Hpy8I	GTNNAC	7 cut(s)	377, 684, 1075, 1404, 1815, 2362, 2487
Hpy99I	CGWCG	3 cut(s)	176, 254, 257
HpyCH4III	ACNGT	5 cut(s)	313, 510, 1351, 1423, 2476
HpyCH4IV	ACGT	4 cut(s)	249, 1126, 2352, 2489
HpyF10VI	GCNNNNNNNGC	8 cut(s)	187, 215, 277, 451, 584, 698, 790, 2378
HpySE526I	ACGT	4 cut(s)	249, 1126, 2352, 2489
Hsp92II	CATG	8 cut(s)	437, 458, 602, 718, 1391, 1501, 2017, 2188
HspAI	GCGC	4 cut(s)	116, 590, 1694, 2599
Kpn2I	TCCGGA	1 cut(s)	1592
KspAI	GTTAAC	1 cut(s)	2487
LguI	GCTCTTC	1 cut(s)	2379
LmnI	GCTCC	6 cut(s)	277, 285, 306, 631, 806, 2554
Lsp1109I	GCAGC	9 cut(s)	715, 796, 1090, 1284, 1446, 1606, 1628, 1903, 2488
LweI	GCATC	8 cut(s)	237, 629, 1083, 1090, 1105, 1171, 1193, 1966
MaeI	CTAG	2 cut(s)	380, 2429
MaeII	ACGT	4 cut(s)	249, 1126, 2352, 2489
MaeIII	GTNAC	6 cut(s)	313, 706, 777, 1060, 1427, 2476
MbiI	CCGCTC	1 cut(s)	2217
MfeI	CAATTG	2 cut(s)	344, 945
MflI	RGATCY	2 cut(s)	2120, 2448
MhlI	GDGCHC	3 cut(s)	282, 303, 636
MlyI	GAGTC	5 cut(s)	140, 1265, 1418, 1616, 1883
MmeI	TCCRAC	2 cut(s)	125, 609
Mph1103I	ATGCAT	1 cut(s)	1186
MroI	TCCGGA	1 cut(s)	1592
MroXI	GAANNNNTTC	1 cut(s)	971
MseI	TTAA	7 cut(s)	852, 978, 1778, 1883, 1964, 2486, 2492
MslI	CAYNNNNRTG	1 cut(s)	766
MspA1I	CMGCKG	4 cut(s)	787, 1275, 1514, 1619
MspI	CCGG	5 cut(s)	141, 318, 473, 1593, 1954
MspR9I	CCNGG	8 cut(s)	46, 141, 474, 1535, 1789, 2118, 2385, 2591
MunI	CAATTG	2 cut(s)	344, 945
Mva1269I	GAATGC	2 cut(s)	83, 2266
MvaI	CCWGG	6 cut(s)	46, 1535, 1789, 2118, 2385, 2591
MvnI	CGCG	2 cut(s)	118, 590
MwoI	GCNNNNNNNGC	8 cut(s)	187, 215, 277, 451, 584, 698, 790, 2378
NciI	CCSGG	2 cut(s)	141, 474
NcoI	CCATGG	1 cut(s)	714
NdeI	CATATG	2 cut(s)	694, 1261
NlaIII	CATG	8 cut(s)	437, 458, 602, 718, 1391, 1501, 2017, 2188
NlaIV	GGNNCC	4 cut(s)	27, 139, 633, 808
NmuCI	GTSAC	3 cut(s)	313, 1427, 2476
NsbI	TGCGCA	1 cut(s)	2600
NsiI	ATGCAT	1 cut(s)	1186
NspI	RCATGY	3 cut(s)	458, 602, 2017
PagI	TCATGA	2 cut(s)	1387, 2184
PceI	AGGCCT	3 cut(s)	1601, 1771, 2589
PciSI	GCTCTTC	1 cut(s)	2379
PctI	GAATGC	2 cut(s)	83, 2266
PdmI	GAANNNNTTC	1 cut(s)	971
PfeI	GAWTC	7 cut(s)	487, 521, 941, 950, 1142, 2066, 2435
PflFI	GACNNNGTC	1 cut(s)	1408
PfoI	TCCNGGA	2 cut(s)	1787, 2116
Ple19I	CGATCG	1 cut(s)	244
PleI	GAGTC	5 cut(s)	140, 1264, 1417, 1615, 1882
PpsI	GAGTC	5 cut(s)	140, 1264, 1417, 1615, 1882
Ppu21I	YACGTR	1 cut(s)	2353
PpuMI	RGGWCCY	1 cut(s)	1721
Psp124BI	GAGCTC	2 cut(s)	282, 303
Psp1406I	AACGTT	1 cut(s)	2489
Psp5II	RGGWCCY	1 cut(s)	1721
Psp6I	CCWGG	6 cut(s)	44, 1533, 1787, 2116, 2383, 2589
PspGI	CCWGG	6 cut(s)	44, 1533, 1787, 2116, 2383, 2589
PspN4I	GGNNCC	4 cut(s)	27, 139, 633, 808
PspPI	GGNCC	8 cut(s)	25, 98, 137, 262, 1508, 1721, 1748, 2391
PspPPI	RGGWCCY	1 cut(s)	1721
PsrI	GAACNNNNNNTAC	2 cut(s)	1960, 1992
PstNI	CAGNNNCTG	2 cut(s)	787, 847
PsuI	RGATCY	2 cut(s)	2120, 2448
PsyI	GACNNNGTC	1 cut(s)	1408
PvuI	CGATCG	1 cut(s)	244
PvuII	CAGCTG	3 cut(s)	787, 1514, 1619
RsaI	GTAC	4 cut(s)	76, 1348, 1701, 2355
RsaNI	GTAC	4 cut(s)	75, 1347, 1700, 2354
RseI	CAYNNNNRTG	1 cut(s)	766
SacI	GAGCTC	2 cut(s)	282, 303
SalI	GTCGAC	1 cut(s)	1402
SapI	GCTCTTC	1 cut(s)	2379
SaqAI	TTAA	7 cut(s)	852, 978, 1778, 1883, 1964, 2486, 2492
Sau96I	GGNCC	8 cut(s)	25, 98, 137, 262, 1508, 1721, 1748, 2391
ScaI	AGTACT	1 cut(s)	1348
SchI	GAGTC	5 cut(s)	140, 1265, 1418, 1616, 1883
ScrFI	CCNGG	8 cut(s)	46, 141, 474, 1535, 1789, 2118, 2385, 2591
SduI	GDGCHC	3 cut(s)	282, 303, 636
SfaNI	GCATC	8 cut(s)	237, 629, 1083, 1090, 1105, 1171, 1193, 1966
SfcI	CTRYAG	4 cut(s)	414, 822, 1107, 2145
SinI	GGWCC	6 cut(s)	25, 98, 137, 262, 1721, 1748
SmiMI	CAYNNNNRTG	1 cut(s)	766
SmlI	CTYRAG	4 cut(s)	1226, 1304, 2227, 2292
SmoI	CTYRAG	4 cut(s)	1226, 1304, 2227, 2292
SnaBI	TACGTA	1 cut(s)	2353
SseBI	AGGCCT	3 cut(s)	1601, 1771, 2589
SspMI	CTAG	2 cut(s)	380, 2429
SstI	GAGCTC	2 cut(s)	282, 303
StuI	AGGCCT	3 cut(s)	1601, 1771, 2589
StyD4I	CCNGG	8 cut(s)	44, 139, 472, 1533, 1787, 2116, 2383, 2589
StyI	CCWWGG	2 cut(s)	640, 714
TaaI	ACNGT	5 cut(s)	313, 510, 1351, 1423, 2476
TaiI	ACGT	4 cut(s)	252, 1129, 2355, 2492
TaqII	GACCGA	1 cut(s)	2324
TatI	WGTACW	1 cut(s)	1346
TauI	GCSGC	4 cut(s)	13, 590, 1278, 2220
TfiI	GAWTC	7 cut(s)	487, 521, 941, 950, 1142, 2066, 2435
Tru1I	TTAA	7 cut(s)	852, 978, 1778, 1883, 1964, 2486, 2492
Tru9I	TTAA	7 cut(s)	852, 978, 1778, 1883, 1964, 2486, 2492
TscAI	CASTG	2 cut(s)	817, 2481
TseFI	GTSAC	3 cut(s)	313, 1427, 2476
Tsp45I	GTSAC	3 cut(s)	313, 1427, 2476
TspGWI	ACGGA	3 cut(s)	84, 1469, 2471
TspRI	CASTG	2 cut(s)	817, 2481
Tth111I	GACNNNGTC	1 cut(s)	1408
VpaK11BI	GGWCC	6 cut(s)	25, 98, 137, 262, 1721, 1748
XapI	RAATTY	6 cut(s)	876, 967, 1005, 2005, 2058, 2538
XceI	RCATGY	3 cut(s)	458, 602, 2017
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1742
XmiI	GTMKAC	2 cut(s)	683, 1403
XmnI	GAANNNNTTC	1 cut(s)	971
XspI	CTAG	2 cut(s)	380, 2429
ZrmI	AGTACT	1 cut(s)	1348
Zsp2I	ATGCAT	1 cut(s)	1186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.