Prupe.6G126200_v2.0.a1

Bifunctional protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0003056
Physical Location & Seq
Forward (+)
9699105 .. 9703299
4195 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G126200.1

Sequence Viewer

Length: 1047 bp
ATGGTGGGTTTCTGGCACAGATTGGGGAACAAAGGCAAGGCCTTATACTCAGCGACGCTCTCACCGCCATGTTCAAGCCCTCTCACTCTCCCTCACATTTGGGTTCCCACCCAAACCCCCCAACGTCCCCTCTCATCTGGGTTTCACCGAGCTACAGGGAAGACTCAGAGTGCTGCTGAAATAATGAGCGGAAAGCCAATTGCAAAAGACATAAATTTGAGAGTAGCTGCTGAAATAAGCAGAATGAAAGCTGCCATTGGAAGACTTCCTGGGTTGGCTGTGGTTTTGGTGGGCTACAGAGAGGACTCACACGCTTATGTCCATATCAACTTAAAAGCTTGTAATGAAGTTGGGATTAAAACTTCCATTGTACAACTGCCCCAAGATTGTACTCAAGATCGACTTATTGATGTTGTTTCGAGTTTTAACAGCAACCCATCTGTGCACGGTATAATTGTTCAACTTCCTCTGCCACAGCATTTGGAAGAGGAAACGATTATAAATTTTGTGAGTCCGGAAAAAGATGTGGATGGCTTTCATCCCCTCAATATAGGGAATCTTGCATTGCGGGGAAGGGAGCCGTTATTCATCCCTTGTGCCCCTAAGGCTTGCATTGAGTTGTTGCTCAGGTATCGTGTGGAGATCATTGGGAAGAATGCAGTGGTAATAGGGAGAAGCAAGATTGCTGGGTTATCCACTTCTTTGCTCTTGCAGAGGCACCACGCGACGGTTAGCACTCTCCATTCATTCACCAACAACCCAGAACAAATTACTCGTCGAGCTGACATTGTTGTATCAGATGTTGGCATTCCAAATATAGTTGGATGCGATTGGCTGATGCCAGGGGCAGTTGTAGTCGACATGGGGACAAATTCAGATCCCAATAGTCCCCGAGGGTTCCGTACCACCGATGATGTTTGCTACGAAGAGGCAATTAAGGTGGTGTCAGCCATAACTCCTGTGCCAGGAGGAGTTGGACCTGCTGTAATCTCAATGCTCCTCTCCAACACCCTTGACTCTGCAAAGCGAGCTTACGGATTCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00670 ko01100 map00670 map01100
Pfam Domains
Protein Families
THF_DHG_CYH THF_DHG_CYH_C

Protein Analysis

349

Amino Acids

37.58

Weight (kDa)

8.65

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 500
Acc36I ACCTGC 1 cut(s) 988
AccB1I GGYRCC 1 cut(s) 717
AccBSI CCGCTC 1 cut(s) 189
AccI GTMKAC 1 cut(s) 858
AccII CGCG 1 cut(s) 725
AccIII TCCGGA 1 cut(s) 514
AciI CCGC 3 cut(s) 65, 189, 568
AclWI GGATC 1 cut(s) 872
AcsI RAATTY 3 cut(s) 214, 502, 871
AfaI GTAC 3 cut(s) 372, 391, 904
AfiI CCNNNNNNNGG 2 cut(s) 727, 965
AgsI TTSAA 2 cut(s) 75, 461
AjnI CCWGG 3 cut(s) 268, 841, 964
AluBI AGCT 6 cut(s) 152, 227, 251, 338, 782, 1031
AluI AGCT 6 cut(s) 152, 227, 251, 338, 782, 1031
Alw21I GWGCWC 1 cut(s) 447
Alw44I GTGCAC 1 cut(s) 443
AlwI GGATC 1 cut(s) 872
Ama87I CYCGRG 1 cut(s) 891
Aor13HI TCCGGA 1 cut(s) 514
AoxI GGCC 1 cut(s) 39
ApaLI GTGCAC 1 cut(s) 443
ApeKI GCWGC 3 cut(s) 173, 227, 251
ApoI RAATTY 3 cut(s) 214, 502, 871
ArsI GACNNNNNNTTYG 2 cut(s) 760, 792
AspS9I GGNCC 1 cut(s) 977
AsuHPI GGTGA 3 cut(s) 54, 137, 742
AvaI CYCGRG 1 cut(s) 891
AvaII GGWCC 1 cut(s) 977
AxyI CCTNAGG 1 cut(s) 603
BaeGI GKGCMC 2 cut(s) 447, 601
BanI GGYRCC 1 cut(s) 717
BbsI GAAGAC 2 cut(s) 167, 268
Bbv12I GWGCWC 1 cut(s) 447
BbvI GCAGC 3 cut(s) 160, 214, 238
BccI CCATC 2 cut(s) 445, 524
BceAI ACGGC 1 cut(s) 565
BciT130I CCWGG 3 cut(s) 270, 843, 966
BfmI CTRYAG 2 cut(s) 153, 295
BfuAI ACCTGC 1 cut(s) 988
BglI GCCNNNNNGGC 1 cut(s) 605
BisI GCNGC 3 cut(s) 174, 228, 252
BlsI GCNGC 3 cut(s) 175, 229, 253
Bme1390I CCNGG 3 cut(s) 270, 843, 966
Bme18I GGWCC 1 cut(s) 977
BmeT110I CYCGRG 1 cut(s) 891
BmgT120I GGNCC 1 cut(s) 977
BmiI GGNNCC 4 cut(s) 105, 579, 719, 899
BmrFI CCNGG 3 cut(s) 270, 843, 966
BmsI GCATC 2 cut(s) 815, 828
BpiI GAAGAC 2 cut(s) 167, 268
Bpu10I CCTNAGC 1 cut(s) 626
BpuEI CTTGAG 1 cut(s) 378
BsaJI CCNNGG 3 cut(s) 269, 842, 892
BsaWI WCCGGW 1 cut(s) 514
Bsc4I CCNNNNNNNGG 2 cut(s) 727, 965
Bse21I CCTNAGG 1 cut(s) 603
Bse3DI GCAATG 1 cut(s) 563
BseAI TCCGGA 1 cut(s) 514
BseBI CCWGG 3 cut(s) 270, 843, 966
BseDI CCNNGG 3 cut(s) 269, 842, 892
BseGI GGATG 4 cut(s) 535, 538, 588, 830
BseLI CCNNNNNNNGG 2 cut(s) 727, 965
BseMI GCAATG 1 cut(s) 563
BseMII CTCAG 3 cut(s) 63, 179, 640
BseRI GAGGAG 2 cut(s) 984, 989
BseSI GKGCMC 2 cut(s) 447, 601
BseXI GCAGC 3 cut(s) 160, 214, 238
BseYI CCCAGC 1 cut(s) 686
Bsh1236I CGCG 1 cut(s) 725
BshFI GGCC 1 cut(s) 41
BshNI GGYRCC 1 cut(s) 717
BsiHKAI GWGCWC 1 cut(s) 447
BsiHKCI CYCGRG 1 cut(s) 891
BsiSI CCGG 1 cut(s) 515
BslFI GGGAC 3 cut(s) 111, 873, 880
BslI CCNNNNNNNGG 2 cut(s) 727, 965
BsmFI GGGAC 3 cut(s) 111, 873, 880
BsmI GAATGC 2 cut(s) 661, 807
BsnI GGCC 1 cut(s) 41
BsoBI CYCGRG 1 cut(s) 891
Bsp1286I GDGCHC 2 cut(s) 447, 601
Bsp13I TCCGGA 1 cut(s) 514
Bsp1407I TGTACA 1 cut(s) 370
Bsp143I GATC 3 cut(s) 397, 642, 877
BspACI CCGC 3 cut(s) 65, 189, 568
BspANI GGCC 1 cut(s) 41
BspCNI CTCAG 3 cut(s) 62, 178, 639
BspEI TCCGGA 1 cut(s) 514
BspFNI CGCG 1 cut(s) 725
BspLI GGNNCC 4 cut(s) 105, 579, 719, 899
BspMI ACCTGC 1 cut(s) 988
BspPI GGATC 1 cut(s) 872
BspT107I GGYRCC 1 cut(s) 717
BsrBI CCGCTC 1 cut(s) 189
BsrDI GCAATG 1 cut(s) 563
BsrGI TGTACA 1 cut(s) 370
BssECI CCNNGG 3 cut(s) 269, 842, 892
BssMI GATC 3 cut(s) 397, 642, 877
Bst2UI CCWGG 3 cut(s) 270, 843, 966
Bst4CI ACNGT 2 cut(s) 449, 730
Bst6I CTCTTC 2 cut(s) 480, 921
BstAUI TGTACA 1 cut(s) 370
BstC8I GCNNGC 2 cut(s) 610, 1029
BstDEI CTNAG 4 cut(s) 49, 165, 603, 626
BstENI CCTNNNNNAGG 1 cut(s) 963
BstF5I GGATG 4 cut(s) 535, 538, 588, 830
BstFNI CGCG 1 cut(s) 725
BstKTI GATC 3 cut(s) 400, 645, 880
BstMBI GATC 3 cut(s) 397, 642, 877
BstMWI GCNNNNNNNGC 3 cut(s) 64, 605, 1028
BstNI CCWGG 3 cut(s) 270, 843, 966
BstSCI CCNGG 3 cut(s) 268, 841, 964
BstSFI CTRYAG 2 cut(s) 153, 295
BstSLI GKGCMC 2 cut(s) 447, 601
BstUI CGCG 1 cut(s) 725
BstV1I GCAGC 3 cut(s) 160, 214, 238
BstV2I GAAGAC 2 cut(s) 167, 268
BstX2I RGATCY 1 cut(s) 877
BstYI RGATCY 1 cut(s) 877
Bsu36I CCTNAGG 1 cut(s) 603
BsuRI GGCC 1 cut(s) 41
BtsCI GGATG 4 cut(s) 535, 538, 588, 830
BtsI GCAGTG 1 cut(s) 666
BtsIMutI CAGTG 1 cut(s) 666
BveI ACCTGC 1 cut(s) 988
Cac8I GCNNGC 2 cut(s) 610, 1029
Cfr13I GGNCC 1 cut(s) 977
CseI GACGC 1 cut(s) 64
Csp6I GTAC 3 cut(s) 371, 390, 903
CspCI CAANNNNNGTGG 4 cut(s) 462, 497, 921, 956
CviAII CATG 2 cut(s) 69, 862
CviQI GTAC 3 cut(s) 371, 390, 903
DdeI CTNAG 4 cut(s) 49, 165, 603, 626
DpnI GATC 3 cut(s) 399, 644, 879
DpnII GATC 3 cut(s) 397, 642, 877
Eam1104I CTCTTC 2 cut(s) 480, 921
EarI CTCTTC 2 cut(s) 480, 921
Eco147I AGGCCT 1 cut(s) 41
Eco47I GGWCC 1 cut(s) 977
Eco81I CCTNAGG 1 cut(s) 603
Eco88I CYCGRG 1 cut(s) 891
EcoNI CCTNNNNNAGG 1 cut(s) 963
EcoRII CCWGG 3 cut(s) 268, 841, 964
FaeI CATG 2 cut(s) 72, 865
FalI AAGNNNNNCTT 2 cut(s) 387, 419
FaqI GGGAC 3 cut(s) 111, 873, 880
FatI CATG 2 cut(s) 68, 861
FauI CCCGC 1 cut(s) 561
FblI GTMKAC 1 cut(s) 858
Fnu4HI GCNGC 3 cut(s) 174, 228, 252
FokI GGATG 4 cut(s) 525, 542, 575, 837
Fsp4HI GCNGC 3 cut(s) 174, 228, 252
GluI GCNGC 3 cut(s) 174, 228, 252
GsaI CCCAGC 1 cut(s) 690
HaeIII GGCC 1 cut(s) 41
HapII CCGG 1 cut(s) 515
HgaI GACGC 1 cut(s) 64
Hin1II CATG 2 cut(s) 72, 865
HincII GTYRAC 1 cut(s) 859
HindII GTYRAC 1 cut(s) 859
HindIII AAGCTT 1 cut(s) 336
HinfI GANTC 6 cut(s) 163, 305, 511, 556, 1016, 1038
HpaII CCGG 1 cut(s) 515
HphI GGTGA 3 cut(s) 54, 137, 742
Hpy166II GTNNAC 2 cut(s) 445, 859
Hpy188I TCNGA 3 cut(s) 168, 799, 877
Hpy188III TCNNGA 2 cut(s) 395, 515
Hpy8I GTNNAC 2 cut(s) 445, 859
Hpy99I CGWCG 3 cut(s) 58, 730, 780
HpyAV CCTTC 1 cut(s) 567
HpyCH4III ACNGT 2 cut(s) 449, 730
HpyCH4IV ACGT 1 cut(s) 124
HpyCH4V TGCA 7 cut(s) 203, 445, 563, 612, 659, 712, 1022
HpyF10VI GCNNNNNNNGC 3 cut(s) 64, 605, 1028
HpyF3I CTNAG 4 cut(s) 49, 165, 603, 626
HpySE526I ACGT 1 cut(s) 124
Hsp92II CATG 2 cut(s) 72, 865
Kpn2I TCCGGA 1 cut(s) 514
Kzo9I GATC 3 cut(s) 397, 642, 877
LmnI GCTCC 2 cut(s) 577, 1002
Lsp1109I GCAGC 3 cut(s) 160, 214, 238
LweI GCATC 2 cut(s) 815, 828
MaeII ACGT 1 cut(s) 124
MalI GATC 3 cut(s) 399, 644, 879
MbiI CCGCTC 1 cut(s) 189
MboI GATC 3 cut(s) 397, 642, 877
MboII GAAGA 5 cut(s) 172, 273, 497, 664, 938
MfeI CAATTG 1 cut(s) 198
MflI RGATCY 1 cut(s) 877
MhlI GDGCHC 2 cut(s) 447, 601
MluCI AATT 7 cut(s) 198, 214, 453, 502, 768, 871, 933
MlyI GAGTC 4 cut(s) 157, 299, 520, 1010
MmeI TCCRAC 3 cut(s) 802, 955, 1029
MroI TCCGGA 1 cut(s) 514
MseI TTAA 4 cut(s) 332, 357, 426, 936
MslI CAYNNNNRTG 2 cut(s) 67, 315
MspI CCGG 1 cut(s) 515
MspR9I CCNGG 3 cut(s) 270, 843, 966
MunI CAATTG 1 cut(s) 198
Mva1269I GAATGC 2 cut(s) 661, 807
MvaI CCWGG 3 cut(s) 270, 843, 966
MvnI CGCG 1 cut(s) 725
MwoI GCNNNNNNNGC 3 cut(s) 64, 605, 1028
NdeII GATC 3 cut(s) 397, 642, 877
NlaIII CATG 2 cut(s) 72, 865
NlaIV GGNNCC 4 cut(s) 105, 579, 719, 899
PceI AGGCCT 1 cut(s) 41
PctI GAATGC 2 cut(s) 661, 807
PfeI GAWTC 2 cut(s) 556, 1038
PkrI GCNGC 3 cut(s) 175, 229, 253
PleI GAGTC 4 cut(s) 157, 299, 519, 1010
PpsI GAGTC 4 cut(s) 157, 299, 519, 1010
PsiI TTATAA 1 cut(s) 500
Psp6I CCWGG 3 cut(s) 268, 841, 964
PspFI CCCAGC 1 cut(s) 686
PspGI CCWGG 3 cut(s) 268, 841, 964
PspN4I GGNNCC 4 cut(s) 105, 579, 719, 899
PspPI GGNCC 1 cut(s) 977
PsuI RGATCY 1 cut(s) 877
RsaI GTAC 3 cut(s) 372, 391, 904
RsaNI GTAC 3 cut(s) 371, 390, 903
RseI CAYNNNNRTG 2 cut(s) 67, 315
SalI GTCGAC 1 cut(s) 857
SaqAI TTAA 4 cut(s) 332, 357, 426, 936
SatI GCNGC 3 cut(s) 174, 228, 252
Sau3AI GATC 3 cut(s) 397, 642, 877
Sau96I GGNCC 1 cut(s) 977
SchI GAGTC 4 cut(s) 157, 299, 520, 1010
ScrFI CCNGG 3 cut(s) 270, 843, 966
SduI GDGCHC 2 cut(s) 447, 601
SfaNI GCATC 2 cut(s) 815, 828
SfcI CTRYAG 2 cut(s) 153, 295
SinI GGWCC 1 cut(s) 977
SmiMI CAYNNNNRTG 2 cut(s) 67, 315
SmlI CTYRAG 1 cut(s) 393
SmoI CTYRAG 1 cut(s) 393
Sse9I AATT 7 cut(s) 198, 214, 453, 502, 768, 871, 933
SseBI AGGCCT 1 cut(s) 41
SsiI CCGC 3 cut(s) 65, 189, 568
StuI AGGCCT 1 cut(s) 41
StyD4I CCNGG 3 cut(s) 268, 841, 964
TaaI ACNGT 2 cut(s) 449, 730
TaiI ACGT 1 cut(s) 127
TaqI TCGA 4 cut(s) 400, 419, 778, 858
TasI AATT 7 cut(s) 198, 214, 453, 502, 768, 871, 933
TatI WGTACW 2 cut(s) 370, 389
TfiI GAWTC 2 cut(s) 556, 1038
Tru1I TTAA 4 cut(s) 332, 357, 426, 936
Tru9I TTAA 4 cut(s) 332, 357, 426, 936
TscAI CASTG 1 cut(s) 666
TseI GCWGC 3 cut(s) 173, 227, 251
TspDTI ATGAA 5 cut(s) 260, 360, 527, 577, 735
TspGWI ACGGA 1 cut(s) 890
TspRI CASTG 1 cut(s) 666
VneI GTGCAC 1 cut(s) 443
VpaK11BI GGWCC 1 cut(s) 977
XagI CCTNNNNNAGG 1 cut(s) 963
XapI RAATTY 3 cut(s) 214, 502, 871
XmiI GTMKAC 1 cut(s) 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.