Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27370 |
| fragaria_vesca | FvH4_3g25570 |
| malus_domestica | MD03G1149400.v1.1 MD11G1168200.v1.1 |
| prunus_persica | Prupe.6G135300_v2.0.a1 |
| pyrus_communis | pycom03g10330 pycom11g14050 |
| rosa_chinensis | RchiOBHm_Chr5g0046421 |
| rosa_laevigata | RLG00000034409 RLG00000034410 |
| rosa_multiflora | Rmu_sc0003878.1_g000049 |
| rosa_roxburghii | Rroxscaffold_1G00034980 |
| rosa_rugosa | Rorug05G0227900 |
| rosa_samantha | Rh5AG309100 Rh5BG317300 Rh5CG343200 Rh5DG327500 |
| rosa_wichuraiana | Rw0G021520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 188 |
| AccI | GTMKAC | 1 cut(s) | 486 |
| AccIII | TCCGGA | 1 cut(s) | 138 |
| AciI | CCGC | 1 cut(s) | 104 |
| AcsI | RAATTY | 1 cut(s) | 622 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 138 |
| AgsI | TTSAA | 2 cut(s) | 80, 511 |
| AjnI | CCWGG | 1 cut(s) | 555 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 497, 529 |
| AluBI | AGCT | 3 cut(s) | 128, 206, 464 |
| AluI | AGCT | 3 cut(s) | 128, 206, 464 |
| Alw21I | GWGCWC | 1 cut(s) | 88 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 338 |
| Aor13HI | TCCGGA | 1 cut(s) | 138 |
| AoxI | GGCC | 2 cut(s) | 48, 404 |
| ApeKI | GCWGC | 6 cut(s) | 206, 215, 218, 323, 461, 593 |
| ApoI | RAATTY | 1 cut(s) | 622 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 246 |
| AspLEI | GCGC | 3 cut(s) | 197, 470, 562 |
| AspS9I | GGNCC | 1 cut(s) | 404 |
| AsuHPI | GGTGA | 1 cut(s) | 631 |
| BanII | GRGCYC | 1 cut(s) | 574 |
| Bbv12I | GWGCWC | 1 cut(s) | 88 |
| BbvCI | CCTCAGC | 1 cut(s) | 185 |
| BbvI | GCAGC | 6 cut(s) | 193, 202, 205, 310, 473, 580 |
| BciT130I | CCWGG | 1 cut(s) | 557 |
| BciVI | GTATCC | 1 cut(s) | 338 |
| BfaI | CTAG | 1 cut(s) | 449 |
| BfmI | CTRYAG | 2 cut(s) | 459, 594 |
| BfoI | RGCGCY | 2 cut(s) | 471, 563 |
| BfuAI | ACCTGC | 1 cut(s) | 188 |
| BfuI | GTATCC | 1 cut(s) | 338 |
| BisI | GCNGC | 6 cut(s) | 207, 216, 219, 324, 462, 594 |
| BlsI | GCNGC | 6 cut(s) | 208, 217, 220, 325, 463, 595 |
| Bme1390I | CCNGG | 1 cut(s) | 557 |
| BmgT120I | GGNCC | 1 cut(s) | 404 |
| BmrFI | CCNGG | 1 cut(s) | 557 |
| BmsI | GCATC | 3 cut(s) | 31, 49, 390 |
| Bpu10I | CCTNAGC | 1 cut(s) | 185 |
| BsaJI | CCNNGG | 2 cut(s) | 45, 407 |
| BsaWI | WCCGGW | 1 cut(s) | 138 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 497, 527 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 138 |
| Bse1I | ACTGG | 2 cut(s) | 274, 524 |
| Bse3DI | GCAATG | 2 cut(s) | 36, 225 |
| BseAI | TCCGGA | 1 cut(s) | 138 |
| BseBI | CCWGG | 1 cut(s) | 557 |
| BseDI | CCNNGG | 2 cut(s) | 45, 407 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 138 |
| BseMI | GCAATG | 2 cut(s) | 36, 225 |
| BseMII | CTCAG | 2 cut(s) | 176, 299 |
| BseNI | ACTGG | 2 cut(s) | 274, 524 |
| BseRI | GAGGAG | 3 cut(s) | 78, 81, 90 |
| BseXI | GCAGC | 6 cut(s) | 193, 202, 205, 310, 473, 580 |
| BshFI | GGCC | 2 cut(s) | 50, 406 |
| BsiHKAI | GWGCWC | 1 cut(s) | 88 |
| BsiSI | CCGG | 1 cut(s) | 139 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 138 |
| BsnI | GGCC | 2 cut(s) | 50, 406 |
| Bsp1286I | GDGCHC | 2 cut(s) | 88, 574 |
| Bsp13I | TCCGGA | 1 cut(s) | 138 |
| Bsp143I | GATC | 1 cut(s) | 295 |
| BspACI | CCGC | 1 cut(s) | 104 |
| BspANI | GGCC | 2 cut(s) | 50, 406 |
| BspCNI | CTCAG | 2 cut(s) | 177, 298 |
| BspEI | TCCGGA | 1 cut(s) | 138 |
| BspMAI | CTGCAG | 2 cut(s) | 463, 598 |
| BspMI | ACCTGC | 1 cut(s) | 188 |
| BsrDI | GCAATG | 2 cut(s) | 36, 225 |
| BsrI | ACTGG | 2 cut(s) | 274, 524 |
| BssECI | CCNNGG | 2 cut(s) | 45, 407 |
| BssMI | GATC | 1 cut(s) | 295 |
| BssNAI | GTATAC | 1 cut(s) | 487 |
| BssT1I | CCWWGG | 2 cut(s) | 45, 407 |
| Bst1107I | GTATAC | 1 cut(s) | 487 |
| Bst2UI | CCWGG | 1 cut(s) | 557 |
| Bst4CI | ACNGT | 2 cut(s) | 267, 436 |
| BstC8I | GCNNGC | 2 cut(s) | 466, 525 |
| BstDEI | CTNAG | 3 cut(s) | 185, 285, 563 |
| BstH2I | RGCGCY | 2 cut(s) | 471, 563 |
| BstHHI | GCGC | 3 cut(s) | 197, 470, 562 |
| BstKTI | GATC | 1 cut(s) | 298 |
| BstMBI | GATC | 1 cut(s) | 295 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 203, 212, 215, 227, 329, 467, 476, 578 |
| BstNI | CCWGG | 1 cut(s) | 557 |
| BstSCI | CCNGG | 1 cut(s) | 555 |
| BstSFI | CTRYAG | 2 cut(s) | 459, 594 |
| BstV1I | GCAGC | 6 cut(s) | 193, 202, 205, 310, 473, 580 |
| BstZ17I | GTATAC | 1 cut(s) | 487 |
| BsuI | GTATCC | 1 cut(s) | 338 |
| BsuRI | GGCC | 2 cut(s) | 50, 406 |
| BtsI | GCAGTG | 1 cut(s) | 339 |
| BtsIMutI | CAGTG | 1 cut(s) | 339 |
| BveI | ACCTGC | 1 cut(s) | 188 |
| Cac8I | GCNNGC | 2 cut(s) | 466, 525 |
| CaiI | CAGNNNCTG | 1 cut(s) | 338 |
| CfoI | GCGC | 3 cut(s) | 197, 470, 562 |
| Cfr13I | GGNCC | 1 cut(s) | 404 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 315, 350 |
| CviAII | CATG | 2 cut(s) | 281, 395 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DdeI | CTNAG | 3 cut(s) | 185, 285, 563 |
| DpnI | GATC | 1 cut(s) | 297 |
| DpnII | GATC | 1 cut(s) | 295 |
| EciI | GGCGGA | 1 cut(s) | 93 |
| Eco130I | CCWWGG | 2 cut(s) | 45, 407 |
| Eco24I | GRGCYC | 1 cut(s) | 574 |
| EcoRI | GAATTC | 1 cut(s) | 622 |
| EcoRII | CCWGG | 1 cut(s) | 555 |
| EcoT14I | CCWWGG | 2 cut(s) | 45, 407 |
| EcoT38I | GRGCYC | 1 cut(s) | 574 |
| ErhI | CCWWGG | 2 cut(s) | 45, 407 |
| FaeI | CATG | 2 cut(s) | 284, 398 |
| FatI | CATG | 2 cut(s) | 280, 394 |
| FblI | GTMKAC | 1 cut(s) | 486 |
| Fnu4HI | GCNGC | 6 cut(s) | 207, 216, 219, 324, 462, 594 |
| FriOI | GRGCYC | 1 cut(s) | 574 |
| Fsp4HI | GCNGC | 6 cut(s) | 207, 216, 219, 324, 462, 594 |
| FspBI | CTAG | 1 cut(s) | 449 |
| GlaI | GCGC | 3 cut(s) | 196, 469, 561 |
| GluI | GCNGC | 6 cut(s) | 207, 216, 219, 324, 462, 594 |
| HaeII | RGCGCY | 2 cut(s) | 471, 563 |
| HaeIII | GGCC | 2 cut(s) | 50, 406 |
| HapII | CCGG | 1 cut(s) | 139 |
| HhaI | GCGC | 3 cut(s) | 197, 470, 562 |
| Hin1II | CATG | 2 cut(s) | 284, 398 |
| Hin6I | GCGC | 3 cut(s) | 195, 468, 560 |
| HinP1I | GCGC | 3 cut(s) | 195, 468, 560 |
| HinfI | GANTC | 2 cut(s) | 5, 247 |
| HpaII | CCGG | 1 cut(s) | 139 |
| HphI | GGTGA | 1 cut(s) | 631 |
| Hpy166II | GTNNAC | 1 cut(s) | 487 |
| Hpy188I | TCNGA | 1 cut(s) | 149 |
| Hpy188III | TCNNGA | 2 cut(s) | 139, 370 |
| Hpy8I | GTNNAC | 1 cut(s) | 487 |
| HpyAV | CCTTC | 4 cut(s) | 74, 265, 364, 376 |
| HpyCH4III | ACNGT | 2 cut(s) | 267, 436 |
| HpyCH4IV | ACGT | 1 cut(s) | 311 |
| HpyCH4V | TGCA | 9 cut(s) | 230, 326, 332, 381, 398, 461, 479, 538, 596 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 203, 212, 215, 227, 329, 467, 476, 578 |
| HpyF3I | CTNAG | 3 cut(s) | 185, 285, 563 |
| HpySE526I | ACGT | 1 cut(s) | 311 |
| Hsp92II | CATG | 2 cut(s) | 284, 398 |
| HspAI | GCGC | 3 cut(s) | 195, 468, 560 |
| Kpn2I | TCCGGA | 1 cut(s) | 138 |
| Kzo9I | GATC | 1 cut(s) | 295 |
| LmnI | GCTCC | 1 cut(s) | 91 |
| Lsp1109I | GCAGC | 6 cut(s) | 193, 202, 205, 310, 473, 580 |
| LweI | GCATC | 3 cut(s) | 31, 49, 390 |
| MaeI | CTAG | 1 cut(s) | 449 |
| MaeII | ACGT | 1 cut(s) | 311 |
| MaeIII | GTNAC | 1 cut(s) | 115 |
| MalI | GATC | 1 cut(s) | 297 |
| MboI | GATC | 1 cut(s) | 295 |
| MboII | GAAGA | 5 cut(s) | 242, 250, 262, 290, 465 |
| MhlI | GDGCHC | 2 cut(s) | 88, 574 |
| MluCI | AATT | 3 cut(s) | 52, 168, 622 |
| MmeI | TCCRAC | 3 cut(s) | 322, 326, 540 |
| MnlI | CCTC | 8 cut(s) | 16, 99, 102, 108, 111, 143, 180, 402 |
| MroI | TCCGGA | 1 cut(s) | 138 |
| MroXI | GAANNNNTTC | 1 cut(s) | 246 |
| MslI | CAYNNNNRTG | 1 cut(s) | 437 |
| MspA1I | CMGCKG | 2 cut(s) | 206, 464 |
| MspI | CCGG | 1 cut(s) | 139 |
| MspR9I | CCNGG | 1 cut(s) | 557 |
| MvaI | CCWGG | 1 cut(s) | 557 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 203, 212, 215, 227, 329, 467, 476, 578 |
| NdeII | GATC | 1 cut(s) | 295 |
| NlaIII | CATG | 2 cut(s) | 284, 398 |
| NmeAIII | GCCGAG | 1 cut(s) | 171 |
| PdmI | GAANNNNTTC | 1 cut(s) | 246 |
| PfeI | GAWTC | 1 cut(s) | 247 |
| PkrI | GCNGC | 6 cut(s) | 208, 217, 220, 325, 463, 595 |
| Psp6I | CCWGG | 1 cut(s) | 555 |
| PspGI | CCWGG | 1 cut(s) | 555 |
| PspPI | GGNCC | 1 cut(s) | 404 |
| PstI | CTGCAG | 2 cut(s) | 463, 598 |
| PstNI | CAGNNNCTG | 1 cut(s) | 338 |
| PvuII | CAGCTG | 2 cut(s) | 206, 464 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| RseI | CAYNNNNRTG | 1 cut(s) | 437 |
| SatI | GCNGC | 6 cut(s) | 207, 216, 219, 324, 462, 594 |
| Sau3AI | GATC | 1 cut(s) | 295 |
| Sau96I | GGNCC | 1 cut(s) | 404 |
| ScrFI | CCNGG | 1 cut(s) | 557 |
| SduI | GDGCHC | 2 cut(s) | 88, 574 |
| SfaNI | GCATC | 3 cut(s) | 31, 49, 390 |
| SfcI | CTRYAG | 2 cut(s) | 459, 594 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 437 |
| Sse9I | AATT | 3 cut(s) | 52, 168, 622 |
| SsiI | CCGC | 1 cut(s) | 104 |
| SspMI | CTAG | 1 cut(s) | 449 |
| StyD4I | CCNGG | 1 cut(s) | 555 |
| StyI | CCWWGG | 2 cut(s) | 45, 407 |
| TaaI | ACNGT | 2 cut(s) | 267, 436 |
| TaiI | ACGT | 1 cut(s) | 314 |
| TaqI | TCGA | 2 cut(s) | 371, 388 |
| TasI | AATT | 3 cut(s) | 52, 168, 622 |
| TatI | WGTACW | 1 cut(s) | 288 |
| TfiI | GAWTC | 1 cut(s) | 247 |
| TscAI | CASTG | 1 cut(s) | 339 |
| TseI | GCWGC | 6 cut(s) | 206, 215, 218, 323, 461, 593 |
| TspDTI | ATGAA | 1 cut(s) | 595 |
| TspRI | CASTG | 1 cut(s) | 339 |
| XapI | RAATTY | 1 cut(s) | 622 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 563 |
| XmiI | GTMKAC | 1 cut(s) | 486 |
| XmnI | GAANNNNTTC | 1 cut(s) | 246 |
| XspI | CTAG | 1 cut(s) | 449 |