Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27370 |
| fragaria_vesca | FvH4_3g25570 |
| malus_domestica | MD03G1149400.v1.1 MD11G1168200.v1.1 |
| prunus_persica | Prupe.6G135300_v2.0.a1 |
| pyrus_communis | pycom03g10330 pycom11g14050 |
| rosa_chinensis | RchiOBHm_Chr5g0046421 |
| rosa_laevigata | RLG00000034409 RLG00000034410 |
| rosa_multiflora | Rmu_sc0003878.1_g000049 |
| rosa_roxburghii | Rroxscaffold_1G00034980 |
| rosa_rugosa | Rorug05G0227900 |
| rosa_samantha | Rh5AG309100 Rh5BG317300 Rh5CG343200 Rh5DG327500 |
| rosa_wichuraiana | Rw0G021520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 203 |
| AccII | CGCG | 1 cut(s) | 320 |
| AciI | CCGC | 3 cut(s) | 123, 196, 227 |
| AcsI | RAATTY | 1 cut(s) | 55 |
| AfaI | GTAC | 1 cut(s) | 40 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 141, 442 |
| AluBI | AGCT | 3 cut(s) | 131, 215, 347 |
| AluI | AGCT | 3 cut(s) | 131, 215, 347 |
| Alw21I | GWGCWC | 1 cut(s) | 94 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 218, 347 |
| AoxI | GGCC | 1 cut(s) | 412 |
| ApeKI | GCWGC | 9 cut(s) | 77, 101, 104, 107, 110, 113, 193, 215, 224 |
| ApoI | RAATTY | 1 cut(s) | 55 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 255 |
| AspS9I | GGNCC | 1 cut(s) | 413 |
| AsuHPI | GGTGA | 1 cut(s) | 112 |
| BanI | GGYRCC | 1 cut(s) | 203 |
| Bbv12I | GWGCWC | 1 cut(s) | 94 |
| BbvI | GCAGC | 9 cut(s) | 64, 88, 91, 94, 97, 100, 180, 202, 211 |
| BccI | CCATC | 1 cut(s) | 153 |
| BclI | TGATCA | 1 cut(s) | 82 |
| BfmI | CTRYAG | 1 cut(s) | 114 |
| BmgT120I | GGNCC | 1 cut(s) | 413 |
| BmiI | GGNNCC | 1 cut(s) | 205 |
| BsaJI | CCNNGG | 1 cut(s) | 416 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 12, 42 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 141, 442 |
| Bse118I | RCCGGY | 2 cut(s) | 41, 206 |
| Bse1I | ACTGG | 2 cut(s) | 60, 283 |
| Bse3DI | GCAATG | 1 cut(s) | 234 |
| BseDI | CCNNGG | 1 cut(s) | 416 |
| BseGI | GGATG | 1 cut(s) | 164 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 141, 442 |
| BseMI | GCAATG | 1 cut(s) | 234 |
| BseMII | CTCAG | 1 cut(s) | 285 |
| BseNI | ACTGG | 2 cut(s) | 60, 283 |
| BseRI | GAGGAG | 2 cut(s) | 84, 168 |
| BseXI | GCAGC | 9 cut(s) | 64, 88, 91, 94, 97, 100, 180, 202, 211 |
| Bsh1236I | CGCG | 1 cut(s) | 320 |
| BshFI | GGCC | 1 cut(s) | 414 |
| BshNI | GGYRCC | 1 cut(s) | 203 |
| BsiHKAI | GWGCWC | 1 cut(s) | 94 |
| BsiSI | CCGG | 2 cut(s) | 42, 207 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 141, 442 |
| BsnI | GGCC | 1 cut(s) | 414 |
| Bsp1286I | GDGCHC | 1 cut(s) | 94 |
| Bsp143I | GATC | 3 cut(s) | 82, 177, 304 |
| BspACI | CCGC | 3 cut(s) | 123, 196, 227 |
| BspANI | GGCC | 1 cut(s) | 414 |
| BspCNI | CTCAG | 1 cut(s) | 286 |
| BspFNI | CGCG | 1 cut(s) | 320 |
| BspLI | GGNNCC | 1 cut(s) | 205 |
| BspMAI | CTGCAG | 1 cut(s) | 118 |
| BspT107I | GGYRCC | 1 cut(s) | 203 |
| BsrDI | GCAATG | 1 cut(s) | 234 |
| BsrFI | RCCGGY | 2 cut(s) | 41, 206 |
| BsrI | ACTGG | 2 cut(s) | 60, 283 |
| BssAI | RCCGGY | 2 cut(s) | 41, 206 |
| BssECI | CCNNGG | 1 cut(s) | 416 |
| BssMI | GATC | 3 cut(s) | 82, 177, 304 |
| BssT1I | CCWWGG | 1 cut(s) | 416 |
| Bst4CI | ACNGT | 2 cut(s) | 276, 445 |
| BstDEI | CTNAG | 1 cut(s) | 294 |
| BstF5I | GGATG | 1 cut(s) | 164 |
| BstFNI | CGCG | 1 cut(s) | 320 |
| BstKTI | GATC | 3 cut(s) | 85, 180, 307 |
| BstMBI | GATC | 3 cut(s) | 82, 177, 304 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 98, 107, 110, 113, 122, 212, 221, 224, 236 |
| BstSFI | CTRYAG | 1 cut(s) | 114 |
| BstUI | CGCG | 1 cut(s) | 320 |
| BstV1I | GCAGC | 9 cut(s) | 64, 88, 91, 94, 97, 100, 180, 202, 211 |
| BsuRI | GGCC | 1 cut(s) | 414 |
| BtsCI | GGATG | 1 cut(s) | 164 |
| BtsIMutI | CAGTG | 1 cut(s) | 67 |
| CaiI | CAGNNNCTG | 2 cut(s) | 218, 347 |
| Cfr10I | RCCGGY | 2 cut(s) | 41, 206 |
| Cfr13I | GGNCC | 1 cut(s) | 413 |
| Csp6I | GTAC | 1 cut(s) | 39 |
| CviAII | CATG | 2 cut(s) | 290, 404 |
| CviJI | RGCY | 9 cut(s) | 32, 77, 131, 199, 215, 230, 347, 414, 421 |
| CviKI_1 | RGCY | 9 cut(s) | 32, 77, 131, 199, 215, 230, 347, 414, 421 |
| CviQI | GTAC | 1 cut(s) | 39 |
| DdeI | CTNAG | 1 cut(s) | 294 |
| DpnI | GATC | 3 cut(s) | 84, 179, 306 |
| DpnII | GATC | 3 cut(s) | 82, 177, 304 |
| Eco130I | CCWWGG | 1 cut(s) | 416 |
| EcoRI | GAATTC | 1 cut(s) | 55 |
| EcoT14I | CCWWGG | 1 cut(s) | 416 |
| ErhI | CCWWGG | 1 cut(s) | 416 |
| FaeI | CATG | 2 cut(s) | 293, 407 |
| FaiI | YATR | 9 cut(s) | 149, 182, 291, 300, 355, 359, 383, 405, 451 |
| FatI | CATG | 2 cut(s) | 289, 403 |
| FbaI | TGATCA | 1 cut(s) | 82 |
| FokI | GGATG | 1 cut(s) | 171 |
| HaeIII | GGCC | 1 cut(s) | 414 |
| HapII | CCGG | 2 cut(s) | 42, 207 |
| Hin1II | CATG | 2 cut(s) | 293, 407 |
| HinfI | GANTC | 2 cut(s) | 5, 256 |
| HpaII | CCGG | 2 cut(s) | 42, 207 |
| HphI | GGTGA | 1 cut(s) | 112 |
| Hpy188III | TCNNGA | 1 cut(s) | 142 |
| HpyAV | CCTTC | 1 cut(s) | 385 |
| HpyCH4III | ACNGT | 2 cut(s) | 276, 445 |
| HpyCH4V | TGCA | 6 cut(s) | 116, 239, 335, 341, 390, 407 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 98, 107, 110, 113, 122, 212, 221, 224, 236 |
| HpyF3I | CTNAG | 1 cut(s) | 294 |
| Hsp92II | CATG | 2 cut(s) | 293, 407 |
| Ksp22I | TGATCA | 1 cut(s) | 82 |
| Kzo9I | GATC | 3 cut(s) | 82, 177, 304 |
| LmnI | GCTCC | 1 cut(s) | 97 |
| LpnPI | CCDG | 8 cut(s) | 55, 73, 111, 127, 158, 220, 225, 296 |
| Lsp1109I | GCAGC | 9 cut(s) | 64, 88, 91, 94, 97, 100, 180, 202, 211 |
| MaeIII | GTNAC | 1 cut(s) | 118 |
| MalI | GATC | 3 cut(s) | 84, 179, 306 |
| MboI | GATC | 3 cut(s) | 82, 177, 304 |
| MboII | GAAGA | 4 cut(s) | 251, 259, 271, 299 |
| MhlI | GDGCHC | 1 cut(s) | 94 |
| MluCI | AATT | 1 cut(s) | 55 |
| MmeI | TCCRAC | 1 cut(s) | 335 |
| MnlI | CCTC | 4 cut(s) | 105, 146, 149, 411 |
| MroXI | GAANNNNTTC | 1 cut(s) | 255 |
| MspA1I | CMGCKG | 1 cut(s) | 215 |
| MspI | CCGG | 2 cut(s) | 42, 207 |
| MvnI | CGCG | 1 cut(s) | 320 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 98, 107, 110, 113, 122, 212, 221, 224, 236 |
| NdeII | GATC | 3 cut(s) | 82, 177, 304 |
| NlaIII | CATG | 2 cut(s) | 293, 407 |
| NlaIV | GGNNCC | 1 cut(s) | 205 |
| NmuCI | GTSAC | 1 cut(s) | 118 |
| PdmI | GAANNNNTTC | 1 cut(s) | 255 |
| PfeI | GAWTC | 2 cut(s) | 5, 256 |
| PspN4I | GGNNCC | 1 cut(s) | 205 |
| PspPI | GGNCC | 1 cut(s) | 413 |
| PstI | CTGCAG | 1 cut(s) | 118 |
| PstNI | CAGNNNCTG | 2 cut(s) | 218, 347 |
| PvuII | CAGCTG | 1 cut(s) | 215 |
| RsaI | GTAC | 1 cut(s) | 40 |
| RsaNI | GTAC | 1 cut(s) | 39 |
| Sau3AI | GATC | 3 cut(s) | 82, 177, 304 |
| Sau96I | GGNCC | 1 cut(s) | 413 |
| SduI | GDGCHC | 1 cut(s) | 94 |
| SetI | ASST | 5 cut(s) | 91, 133, 217, 349, 403 |
| SfcI | CTRYAG | 1 cut(s) | 114 |
| Sse9I | AATT | 1 cut(s) | 55 |
| SsiI | CCGC | 3 cut(s) | 123, 196, 227 |
| StyI | CCWWGG | 1 cut(s) | 416 |
| TaaI | ACNGT | 2 cut(s) | 276, 445 |
| TaqI | TCGA | 2 cut(s) | 8, 397 |
| TasI | AATT | 1 cut(s) | 55 |
| TauI | GCSGC | 2 cut(s) | 199, 230 |
| TfiI | GAWTC | 2 cut(s) | 5, 256 |
| TscAI | CASTG | 1 cut(s) | 67 |
| TseFI | GTSAC | 1 cut(s) | 118 |
| TseI | GCWGC | 9 cut(s) | 77, 101, 104, 107, 110, 113, 193, 215, 224 |
| Tsp45I | GTSAC | 1 cut(s) | 118 |
| TspRI | CASTG | 1 cut(s) | 67 |
| XapI | RAATTY | 1 cut(s) | 55 |
| XmnI | GAANNNNTTC | 1 cut(s) | 255 |