Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0009477

Physical Location & Seq

Genomic Coordinates Forward (+)

11615077 .. 11620018

Gene Structure 4942 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G143300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGGCAAGCACCTCTCCCGCTCTGTCTGTGTCGAAATTAGATTTTCCATTTTTATCCTCTCAGAGAAACATAACTTTCAACAAGGAAAATCTTCATCAAGTTAAGATGCCTCGTAGGATGTCTAAGTTTTCTGGGTTGGAATCAAATGGGTTTATCTTATTTTCTTCTTTGAGTGGTCAAATTGGTGAGGGCAGCTTTCCTAGTCCAGAAGCCACTGCGAACAACAATGCGCCTGAGGTCCAAGTTCAAAGCAGAATATGGAACTGGAGGGCTTATTCTATCCGCTATCAGCATGCTGGCAACCGTGGCCCGGCATTAGTATTAATTCATGGTTTTGGAGCAAACAGTGACCATTGGAGGAAAAATATTCCAGTTCTTGCAAAATCACATAGGGTATACTCAATTGATCTTATTGGTTATGGGTACTCAGACAAACCAAATCCTCGTCAATTTGGGGAAAGTTCCTTTTATACATTTGAGACATGGGGCACCCAGCTAAATGACTTTTGTATTGATGTGGTCAAGGATGAAGCATTCTTTATATGCAACTCTATCGGAGGACTTGTTGGTCTTCAGGCGGCAGTTATGGAGCCACAGTTATGTAAGGGCATAATGCTCTTAAATATTTCTCTTCGTATGCTTCATATTAAAAAGCAGCCTTGGTACGGAAGACCATTGATTAGATCATTTCAGAACTTACTGAGGAATACTGATGTGGGCAAATATTTTTTCAAAACTGTTGCCACACCAGAGTCTGTGAGGAATATCCTTTGCCAGTGCTACCATGACACCTCCCAGGTAACAGAGGAACTAGTTCAAAAAATCCTTCTTCCAGGACTTGAGCCTGGTGCTGTAGATGTATTTCTGGAGTTCATTTGTTACTCGGGTGGCCCCCTTCCTGAGGAACTATTGCCTCAAGTGAAGTGCCCTGTTTTGATAGGATGGGGTGAGAAGGATCCATGGGAGCCCATTGAACTTGGACGTGCCTATGGGAAATTCGATTCTGTAGAAGACTTCGTTGTTCTTCCTAATGTCGGCCACTGCCCTCAGGATGAAGCACCTGAACTAGTGAATCCACTGGTCGAGTCATTTGTGGCACGCCATGCTGCACTCTCAGCCAGCATTTCCACGGCTACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

380

Amino Acids

42.3

Weight (kDa)

6.32

Isoelectric Point (pI)

47.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19850
fragaria_vesca	FvH4_3g45410 FvH4_3g45410 FvH4_3g45410 FvH4_3g45410
malus_domestica	MD11G1006800.v1.1 MD11G1007800.v1.1
prunus_persica	Prupe.6G005000_v2.0.a1 Prupe.6G143300_v2.0.a1 Prupe.6G143300_v2.0.a1
pyrus_communis	pycom11g00530
rosa_chinensis	RchiOBHm_Chr5g0083221
rosa_laevigata	RLG00000037020
rosa_multiflora	Rmu_co8146422.1_g000001 Rmu_ssc0000026.1_g000009
rosa_roxburghii	Rroxscaffold_1G00001270
rosa_rugosa	Rorug05G0483500
rosa_samantha	Rh5AG532800 Rh5BG560000 Rh5CG582700 Rh5DG569300
rosa_wichuraiana	Rw5G050010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	567
AccB1I	GGYRCC	1 cut(s)	488
AccBSI	CCGCTC	1 cut(s)	20
AccI	GTMKAC	1 cut(s)	396
AciI	CCGC	3 cut(s)	18, 283, 578
AclWI	GGATC	2 cut(s)	950, 963
AcoI	YGGCCR	1 cut(s)	1036
AcsI	RAATTY	1 cut(s)	995
AcuI	CTGAAG	1 cut(s)	557
AfaI	GTAC	2 cut(s)	425, 665
AfiI	CCNNNNNNNGG	4 cut(s)	310, 665, 901, 1034
AgsI	TTSAA	5 cut(s)	79, 248, 733, 818, 974
AhlI	ACTAGT	2 cut(s)	811, 1066
AjiI	CACGTC	1 cut(s)	983
AjnI	CCWGG	3 cut(s)	795, 832, 844
AluBI	AGCT	2 cut(s)	195, 496
AluI	AGCT	2 cut(s)	195, 496
Alw26I	GTCTC	1 cut(s)	473
AlwI	GGATC	2 cut(s)	950, 963
AlwNI	CAGNNNCTG	1 cut(s)	755
Ama87I	CYCGRG	1 cut(s)	883
AoxI	GGCC	3 cut(s)	307, 889, 1036
ApeKI	GCWGC	3 cut(s)	192, 655, 1106
ApoI	RAATTY	1 cut(s)	995
AseI	ATTAAT	1 cut(s)	323
Asp700I	GAANNNNTTC	2 cut(s)	90, 813
AspLEI	GCGC	1 cut(s)	232
AspS9I	GGNCC	3 cut(s)	238, 308, 890
AsuC2I	CCSGG	1 cut(s)	311
AsuHPI	GGTGA	2 cut(s)	197, 959
AvaI	CYCGRG	1 cut(s)	883
AvaII	GGWCC	1 cut(s)	238
AxyI	CCTNAGG	3 cut(s)	234, 900, 1047
BaeGI	GKGCMC	2 cut(s)	491, 929
BamHI	GGATCC	1 cut(s)	955
BanI	GGYRCC	1 cut(s)	488
BanII	GRGCYC	1 cut(s)	969
BbsI	GAAGAC	3 cut(s)	563, 676, 1017
BbvI	GCAGC	3 cut(s)	204, 667, 1093
BccI	CCATC	1 cut(s)	936
BcgI	CGANNNNNNTGC	2 cut(s)	535, 569
BciT130I	CCWGG	3 cut(s)	797, 834, 846
BcnI	CCSGG	1 cut(s)	311
BcoDI	GTCTC	1 cut(s)	473
BcuI	ACTAGT	2 cut(s)	811, 1066
BfaI	CTAG	3 cut(s)	201, 812, 1067
BfmI	CTRYAG	2 cut(s)	852, 1005
BisI	GCNGC	4 cut(s)	193, 579, 656, 1107
BlsI	GCNGC	4 cut(s)	194, 580, 657, 1108
Bme1390I	CCNGG	4 cut(s)	311, 797, 834, 846
Bme18I	GGWCC	1 cut(s)	238
BmeT110I	CYCGRG	1 cut(s)	883
BmgBI	CACGTC	1 cut(s)	983
BmgT120I	GGNCC	3 cut(s)	238, 308, 890
BmiI	GGNNCC	5 cut(s)	490, 591, 892, 957, 966
BmrFI	CCNGG	4 cut(s)	311, 797, 834, 846
BmsI	GCATC	1 cut(s)	96
BpiI	GAAGAC	3 cut(s)	563, 676, 1017
BpmI	CTGGAG	2 cut(s)	286, 887
BpuEI	CTTGAG	2 cut(s)	860, 900
BpuMI	CCSGG	1 cut(s)	311
BsaJI	CCNNGG	5 cut(s)	304, 659, 795, 959, 1128
BsaXI	ACNNNNNCTCC	4 cut(s)	549, 579, 581, 611
Bsc4I	CCNNNNNNNGG	4 cut(s)	310, 665, 901, 1034
Bse1I	ACTGG	4 cut(s)	269, 371, 775, 1083
Bse21I	CCTNAGG	3 cut(s)	234, 900, 1047
BseBI	CCWGG	3 cut(s)	797, 834, 846
BseDI	CCNNGG	5 cut(s)	304, 659, 795, 959, 1128
BseGI	GGATG	4 cut(s)	123, 532, 947, 1057
BseLI	CCNNNNNNNGG	4 cut(s)	310, 665, 901, 1034
BseMII	CTCAG	7 cut(s)	74, 225, 441, 692, 891, 1061, 1128
BseNI	ACTGG	4 cut(s)	269, 371, 775, 1083
BseSI	GKGCMC	2 cut(s)	491, 929
BseXI	GCAGC	3 cut(s)	204, 667, 1093
BseYI	CCCAGC	1 cut(s)	492
BsgI	GTGCAG	1 cut(s)	1092
BshFI	GGCC	3 cut(s)	309, 891, 1038
BshNI	GGYRCC	1 cut(s)	488
BsiHKCI	CYCGRG	1 cut(s)	883
BsiSI	CCGG	1 cut(s)	311
BslI	CCNNNNNNNGG	4 cut(s)	310, 665, 901, 1034
BsmAI	GTCTC	1 cut(s)	473
BsmI	GAATGC	1 cut(s)	533
BsnI	GGCC	3 cut(s)	309, 891, 1038
BsoBI	CYCGRG	1 cut(s)	883
Bsp1286I	GDGCHC	3 cut(s)	491, 929, 969
Bsp143I	GATC	3 cut(s)	406, 683, 955
Bsp19I	CCATGG	1 cut(s)	959
BspACI	CCGC	3 cut(s)	18, 283, 578
BspANI	GGCC	3 cut(s)	309, 891, 1038
BspCNI	CTCAG	7 cut(s)	73, 226, 440, 693, 892, 1060, 1127
BspLI	GGNNCC	5 cut(s)	490, 591, 892, 957, 966
BspPI	GGATC	2 cut(s)	950, 963
BspT107I	GGYRCC	1 cut(s)	488
BsrBI	CCGCTC	1 cut(s)	20
BsrI	ACTGG	4 cut(s)	269, 371, 775, 1083
BssECI	CCNNGG	5 cut(s)	304, 659, 795, 959, 1128
BssMI	GATC	3 cut(s)	406, 683, 955
BssNAI	GTATAC	1 cut(s)	397
BssT1I	CCWWGG	2 cut(s)	659, 959
Bst1107I	GTATAC	1 cut(s)	397
Bst2UI	CCWGG	3 cut(s)	797, 834, 846
Bst4CI	ACNGT	4 cut(s)	305, 347, 597, 739
Bst6I	CTCTTC	1 cut(s)	636
BstAPI	GCANNNNNTGC	1 cut(s)	1103
BstC8I	GCNNGC	5 cut(s)	7, 294, 298, 1099, 1120
BstDEI	CTNAG	8 cut(s)	60, 123, 234, 427, 701, 900, 1047, 1114
BstDSI	CCRYGG	3 cut(s)	304, 959, 1128
BstENI	CCTNNNNNAGG	1 cut(s)	899
BstF5I	GGATG	4 cut(s)	123, 532, 947, 1057
BstHHI	GCGC	1 cut(s)	232
BstKTI	GATC	3 cut(s)	409, 686, 958
BstMAI	GTCTC	1 cut(s)	473
BstMBI	GATC	3 cut(s)	406, 683, 955
BstMWI	GCNNNNNNNGC	3 cut(s)	306, 1103, 1115
BstNI	CCWGG	3 cut(s)	797, 834, 846
BstNSI	RCATGY	1 cut(s)	296
BstSCI	CCNGG	4 cut(s)	309, 795, 832, 844
BstSFI	CTRYAG	2 cut(s)	852, 1005
BstSLI	GKGCMC	2 cut(s)	491, 929
BstV1I	GCAGC	3 cut(s)	204, 667, 1093
BstV2I	GAAGAC	3 cut(s)	563, 676, 1017
BstX2I	RGATCY	1 cut(s)	955
BstYI	RGATCY	1 cut(s)	955
BstZ17I	GTATAC	1 cut(s)	397
Bsu36I	CCTNAGG	3 cut(s)	234, 900, 1047
BsuRI	GGCC	3 cut(s)	309, 891, 1038
BtgI	CCRYGG	3 cut(s)	304, 959, 1128
BtrI	CACGTC	1 cut(s)	983
BtsCI	GGATG	4 cut(s)	123, 532, 947, 1057
BtsI	GCAGTG	2 cut(s)	213, 1039
BtsIMutI	CAGTG	5 cut(s)	213, 352, 782, 1039, 1076
Cac8I	GCNNGC	5 cut(s)	7, 294, 298, 1099, 1120
CaiI	CAGNNNCTG	1 cut(s)	755
CfoI	GCGC	1 cut(s)	232
Cfr13I	GGNCC	3 cut(s)	238, 308, 890
Csp6I	GTAC	2 cut(s)	424, 664
CviAII	CATG	6 cut(s)	293, 329, 483, 785, 960, 1103
CviQI	GTAC	2 cut(s)	424, 664
DdeI	CTNAG	8 cut(s)	60, 123, 234, 427, 701, 900, 1047, 1114
DpnI	GATC	3 cut(s)	408, 685, 957
DpnII	GATC	3 cut(s)	406, 683, 955
DrdI	GACNNNNNNGTC	1 cut(s)	567
DseDI	GACNNNNNNGTC	1 cut(s)	567
EaeI	YGGCCR	1 cut(s)	1036
Eam1104I	CTCTTC	1 cut(s)	636
EarI	CTCTTC	1 cut(s)	636
Eco130I	CCWWGG	2 cut(s)	659, 959
Eco24I	GRGCYC	1 cut(s)	969
Eco47I	GGWCC	1 cut(s)	238
Eco57I	CTGAAG	1 cut(s)	557
Eco81I	CCTNAGG	3 cut(s)	234, 900, 1047
Eco88I	CYCGRG	1 cut(s)	883
EcoNI	CCTNNNNNAGG	1 cut(s)	899
EcoRII	CCWGG	3 cut(s)	795, 832, 844
EcoT14I	CCWWGG	2 cut(s)	659, 959
EcoT38I	GRGCYC	1 cut(s)	969
ErhI	CCWWGG	2 cut(s)	659, 959
FaeI	CATG	6 cut(s)	296, 332, 486, 788, 963, 1106
FatI	CATG	6 cut(s)	292, 328, 482, 784, 959, 1102
FauI	CCCGC	1 cut(s)	25
FblI	GTMKAC	1 cut(s)	396
Fnu4HI	GCNGC	4 cut(s)	193, 579, 656, 1107
FokI	GGATG	4 cut(s)	130, 539, 954, 1064
FriOI	GRGCYC	1 cut(s)	969
Fsp4HI	GCNGC	4 cut(s)	193, 579, 656, 1107
FspBI	CTAG	3 cut(s)	201, 812, 1067
GlaI	GCGC	1 cut(s)	231
GluI	GCNGC	4 cut(s)	193, 579, 656, 1107
GsaI	CCCAGC	1 cut(s)	496
GsuI	CTGGAG	2 cut(s)	286, 887
HaeIII	GGCC	3 cut(s)	309, 891, 1038
HapII	CCGG	1 cut(s)	311
HhaI	GCGC	1 cut(s)	232
Hin1II	CATG	6 cut(s)	296, 332, 486, 788, 963, 1106
Hin6I	GCGC	1 cut(s)	230
HinP1I	GCGC	1 cut(s)	230
HinfI	GANTC	5 cut(s)	140, 752, 1001, 1072, 1085
HpaII	CCGG	1 cut(s)	311
HphI	GGTGA	2 cut(s)	197, 959
Hpy166II	GTNNAC	1 cut(s)	397
Hpy188I	TCNGA	4 cut(s)	63, 430, 557, 693
Hpy188III	TCNNGA	4 cut(s)	206, 866, 899, 1049
Hpy8I	GTNNAC	1 cut(s)	397
HpyAV	CCTTC	3 cut(s)	836, 905, 946
HpyCH4III	ACNGT	4 cut(s)	305, 347, 597, 739
HpyCH4IV	ACGT	1 cut(s)	982
HpyCH4V	TGCA	3 cut(s)	380, 546, 1109
HpyF10VI	GCNNNNNNNGC	3 cut(s)	306, 1103, 1115
HpyF3I	CTNAG	8 cut(s)	60, 123, 234, 427, 701, 900, 1047, 1114
HpySE526I	ACGT	1 cut(s)	982
Hsp92II	CATG	6 cut(s)	296, 332, 486, 788, 963, 1106
HspAI	GCGC	1 cut(s)	230
Kzo9I	GATC	3 cut(s)	406, 683, 955
LmnI	GCTCC	3 cut(s)	338, 589, 964
Lsp1109I	GCAGC	3 cut(s)	204, 667, 1093
LweI	GCATC	1 cut(s)	96
MaeI	CTAG	3 cut(s)	201, 812, 1067
MaeII	ACGT	1 cut(s)	982
MaeIII	GTNAC	3 cut(s)	347, 799, 878
MalI	GATC	3 cut(s)	408, 685, 957
MbiI	CCGCTC	1 cut(s)	20
MboI	GATC	3 cut(s)	406, 683, 955
MboII	GAAGA	8 cut(s)	83, 156, 563, 623, 681, 821, 1016, 1022
MfeI	CAATTG	1 cut(s)	402
MflI	RGATCY	1 cut(s)	955
MhlI	GDGCHC	3 cut(s)	491, 929, 969
MluCI	AATT	6 cut(s)	35, 180, 324, 402, 449, 995
MlyI	GAGTC	2 cut(s)	761, 1094
MmeI	TCCRAC	1 cut(s)	117
MroXI	GAANNNNTTC	2 cut(s)	90, 813
MseI	TTAA	4 cut(s)	102, 323, 620, 648
MslI	CAYNNNNRTG	1 cut(s)	598
MspI	CCGG	1 cut(s)	311
MspR9I	CCNGG	4 cut(s)	311, 797, 834, 846
MunI	CAATTG	1 cut(s)	402
Mva1269I	GAATGC	1 cut(s)	533
MvaI	CCWGG	3 cut(s)	797, 834, 846
MwoI	GCNNNNNNNGC	3 cut(s)	306, 1103, 1115
NciI	CCSGG	1 cut(s)	311
NcoI	CCATGG	1 cut(s)	959
NdeII	GATC	3 cut(s)	406, 683, 955
NlaIII	CATG	6 cut(s)	296, 332, 486, 788, 963, 1106
NlaIV	GGNNCC	5 cut(s)	490, 591, 892, 957, 966
NmuCI	GTSAC	1 cut(s)	347
NspI	RCATGY	1 cut(s)	296
PaeI	GCATGC	1 cut(s)	296
PctI	GAATGC	1 cut(s)	533
PdmI	GAANNNNTTC	2 cut(s)	90, 813
PfeI	GAWTC	3 cut(s)	140, 1001, 1072
PfoI	TCCNGGA	1 cut(s)	832
PkrI	GCNGC	4 cut(s)	194, 580, 657, 1108
PleI	GAGTC	2 cut(s)	760, 1093
PpsI	GAGTC	2 cut(s)	760, 1093
PshBI	ATTAAT	1 cut(s)	323
Psp6I	CCWGG	3 cut(s)	795, 832, 844
PspFI	CCCAGC	1 cut(s)	492
PspGI	CCWGG	3 cut(s)	795, 832, 844
PspN4I	GGNNCC	5 cut(s)	490, 591, 892, 957, 966
PspPI	GGNCC	3 cut(s)	238, 308, 890
PstNI	CAGNNNCTG	1 cut(s)	755
PsuI	RGATCY	1 cut(s)	955
RsaI	GTAC	2 cut(s)	425, 665
RsaNI	GTAC	2 cut(s)	424, 664
RseI	CAYNNNNRTG	1 cut(s)	598
SaqAI	TTAA	4 cut(s)	102, 323, 620, 648
SatI	GCNGC	4 cut(s)	193, 579, 656, 1107
Sau3AI	GATC	3 cut(s)	406, 683, 955
Sau96I	GGNCC	3 cut(s)	238, 308, 890
SchI	GAGTC	2 cut(s)	761, 1094
ScrFI	CCNGG	4 cut(s)	311, 797, 834, 846
SduI	GDGCHC	3 cut(s)	491, 929, 969
SetI	ASST	9 cut(s)	14, 197, 240, 498, 794, 801, 985, 1063, 1139
SfaNI	GCATC	1 cut(s)	96
SfcI	CTRYAG	2 cut(s)	852, 1005
SinI	GGWCC	1 cut(s)	238
SmiMI	CAYNNNNRTG	1 cut(s)	598
SmlI	CTYRAG	2 cut(s)	839, 915
SmoI	CTYRAG	2 cut(s)	839, 915
SpeI	ACTAGT	2 cut(s)	811, 1066
SphI	GCATGC	1 cut(s)	296
Sse9I	AATT	6 cut(s)	35, 180, 324, 402, 449, 995
SsiI	CCGC	3 cut(s)	18, 283, 578
SspI	AATATT	3 cut(s)	367, 625, 725
SspMI	CTAG	3 cut(s)	201, 812, 1067
StyD4I	CCNGG	4 cut(s)	309, 795, 832, 844
StyI	CCWWGG	2 cut(s)	659, 959
TaaI	ACNGT	4 cut(s)	305, 347, 597, 739
TaiI	ACGT	1 cut(s)	985
TaqI	TCGA	3 cut(s)	32, 999, 1083
TasI	AATT	6 cut(s)	35, 180, 324, 402, 449, 995
TauI	GCSGC	1 cut(s)	581
TfiI	GAWTC	3 cut(s)	140, 1001, 1072
Tru1I	TTAA	4 cut(s)	102, 323, 620, 648
Tru9I	TTAA	4 cut(s)	102, 323, 620, 648
TscAI	CASTG	5 cut(s)	220, 352, 782, 1046, 1083
TseFI	GTSAC	1 cut(s)	347
TseI	GCWGC	3 cut(s)	192, 655, 1106
Tsp45I	GTSAC	1 cut(s)	347
TspDTI	ATGAA	6 cut(s)	83, 317, 543, 632, 862, 1068
TspGWI	ACGGA	1 cut(s)	681
TspRI	CASTG	5 cut(s)	220, 352, 782, 1046, 1083
VpaK11BI	GGWCC	1 cut(s)	238
VspI	ATTAAT	1 cut(s)	323
XagI	CCTNNNNNAGG	1 cut(s)	899
XapI	RAATTY	1 cut(s)	995
XceI	RCATGY	1 cut(s)	296
XmiI	GTMKAC	1 cut(s)	396
XmnI	GAANNNNTTC	2 cut(s)	90, 813
XspI	CTAG	3 cut(s)	201, 812, 1067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.