DNA mismatch repair
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25540 |
| fragaria_vesca | FvH4_7g29360 |
| malus_domestica | MD07G1267600.v1.1 |
| prunus_persica | Prupe.2G293300_v2.0.a1 Prupe.6G163500_v2.0.a1 |
| pyrus_communis | pycom01g20970 pycom07g24520 |
| rosa_chinensis | RchiOBHm_Chr1g0377121 |
| rosa_laevigata | RLG00000026541 |
| rosa_multiflora | Rmu_ssc0000155.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00281430 |
| rosa_rugosa | Rorug01G0401600 |
| rosa_samantha | Rh1AG419000 Rh1BG378100 Rh1CG392100 Rh1DG408800 |
| rosa_wichuraiana | Rw1G036750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 37, 125 |
| AhlI | ACTAGT | 1 cut(s) | 50 |
| AluBI | AGCT | 1 cut(s) | 310 |
| AluI | AGCT | 1 cut(s) | 310 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 155 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 135, 167 |
| AspLEI | GCGC | 1 cut(s) | 180 |
| AspS9I | GGNCC | 1 cut(s) | 44 |
| AsuHPI | GGTGA | 2 cut(s) | 159, 193 |
| AvaII | GGWCC | 1 cut(s) | 44 |
| AxyI | CCTNAGG | 1 cut(s) | 80 |
| BccI | CCATC | 2 cut(s) | 229, 328 |
| BcuI | ACTAGT | 1 cut(s) | 50 |
| BfaI | CTAG | 3 cut(s) | 51, 314, 367 |
| BisI | GCNGC | 1 cut(s) | 125 |
| BlsI | GCNGC | 1 cut(s) | 126 |
| Bme18I | GGWCC | 1 cut(s) | 44 |
| BmgT120I | GGNCC | 1 cut(s) | 44 |
| BmiI | GGNNCC | 1 cut(s) | 46 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 121, 151, 188, 218 |
| Bse21I | CCTNAGG | 1 cut(s) | 80 |
| BseGI | GGATG | 2 cut(s) | 221, 323 |
| BseMII | CTCAG | 1 cut(s) | 94 |
| BseRI | GAGGAG | 4 cut(s) | 97, 176, 181, 196 |
| BsgI | GTGCAG | 1 cut(s) | 255 |
| BsmI | GAATGC | 1 cut(s) | 180 |
| BspACI | CCGC | 2 cut(s) | 37, 125 |
| BspCNI | CTCAG | 1 cut(s) | 93 |
| BspLI | GGNNCC | 1 cut(s) | 46 |
| Bst4CI | ACNGT | 2 cut(s) | 151, 157 |
| BstDEI | CTNAG | 1 cut(s) | 80 |
| BstF5I | GGATG | 2 cut(s) | 221, 323 |
| BstHHI | GCGC | 1 cut(s) | 180 |
| Bsu36I | CCTNAGG | 1 cut(s) | 80 |
| BtsCI | GGATG | 2 cut(s) | 221, 323 |
| BtsI | GCAGTG | 1 cut(s) | 267 |
| BtsIMutI | CAGTG | 2 cut(s) | 153, 267 |
| CaiI | CAGNNNCTG | 1 cut(s) | 155 |
| CfoI | GCGC | 1 cut(s) | 180 |
| Cfr13I | GGNCC | 1 cut(s) | 44 |
| CviJI | RGCY | 2 cut(s) | 124, 310 |
| CviKI_1 | RGCY | 2 cut(s) | 124, 310 |
| DdeI | CTNAG | 1 cut(s) | 80 |
| Eco47I | GGWCC | 1 cut(s) | 44 |
| Eco81I | CCTNAGG | 1 cut(s) | 80 |
| EcoO109I | RGGNCCY | 1 cut(s) | 44 |
| FaiI | YATR | 1 cut(s) | 263 |
| Fnu4HI | GCNGC | 1 cut(s) | 125 |
| FokI | GGATG | 2 cut(s) | 208, 310 |
| Fsp4HI | GCNGC | 1 cut(s) | 125 |
| FspBI | CTAG | 3 cut(s) | 51, 314, 367 |
| GlaI | GCGC | 1 cut(s) | 179 |
| GluI | GCNGC | 1 cut(s) | 125 |
| HhaI | GCGC | 1 cut(s) | 180 |
| Hin6I | GCGC | 1 cut(s) | 178 |
| HinP1I | GCGC | 1 cut(s) | 178 |
| HincII | GTYRAC | 1 cut(s) | 160 |
| HindII | GTYRAC | 1 cut(s) | 160 |
| HindIII | AAGCTT | 1 cut(s) | 308 |
| HphI | GGTGA | 2 cut(s) | 159, 193 |
| Hpy166II | GTNNAC | 1 cut(s) | 160 |
| Hpy188I | TCNGA | 1 cut(s) | 328 |
| Hpy188III | TCNNGA | 2 cut(s) | 304, 314 |
| Hpy8I | GTNNAC | 1 cut(s) | 160 |
| HpyAV | CCTTC | 2 cut(s) | 351, 357 |
| HpyCH4III | ACNGT | 2 cut(s) | 151, 157 |
| HpyCH4V | TGCA | 1 cut(s) | 272 |
| HpyF3I | CTNAG | 1 cut(s) | 80 |
| HspAI | GCGC | 1 cut(s) | 178 |
| LpnPI | CCDG | 3 cut(s) | 45, 67, 317 |
| MaeI | CTAG | 3 cut(s) | 51, 314, 367 |
| MaeIII | GTNAC | 1 cut(s) | 151 |
| MboII | GAAGA | 3 cut(s) | 204, 292, 342 |
| MmeI | TCCRAC | 1 cut(s) | 351 |
| Mva1269I | GAATGC | 1 cut(s) | 180 |
| NlaIV | GGNNCC | 1 cut(s) | 46 |
| NmuCI | GTSAC | 1 cut(s) | 151 |
| PctI | GAATGC | 1 cut(s) | 180 |
| PkrI | GCNGC | 1 cut(s) | 126 |
| PpuMI | RGGWCCY | 1 cut(s) | 44 |
| Psp5II | RGGWCCY | 1 cut(s) | 44 |
| PspN4I | GGNNCC | 1 cut(s) | 46 |
| PspPI | GGNCC | 1 cut(s) | 44 |
| PspPPI | RGGWCCY | 1 cut(s) | 44 |
| PstNI | CAGNNNCTG | 1 cut(s) | 155 |
| SatI | GCNGC | 1 cut(s) | 125 |
| Sau96I | GGNCC | 1 cut(s) | 44 |
| SetI | ASST | 7 cut(s) | 118, 139, 201, 206, 312, 343, 364 |
| SgeI | CNNG | 6 cut(s) | 44, 63, 94, 187, 316, 326 |
| SinI | GGWCC | 1 cut(s) | 44 |
| SpeI | ACTAGT | 1 cut(s) | 50 |
| SsiI | CCGC | 2 cut(s) | 37, 125 |
| SspMI | CTAG | 3 cut(s) | 51, 314, 367 |
| TaaI | ACNGT | 2 cut(s) | 151, 157 |
| TauI | GCSGC | 1 cut(s) | 127 |
| TscAI | CASTG | 2 cut(s) | 160, 274 |
| TseFI | GTSAC | 1 cut(s) | 151 |
| Tsp45I | GTSAC | 1 cut(s) | 151 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 2 cut(s) | 160, 274 |
| VpaK11BI | GGWCC | 1 cut(s) | 44 |
| XbaI | TCTAGA | 1 cut(s) | 313 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 55 |
| XspI | CTAG | 3 cut(s) | 51, 314, 367 |