Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000155.1

Orthogroup ID

OG0014434

Physical Location & Seq

Genomic Coordinates Forward (+)

66777 .. 75874

Gene Structure 9098 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000155.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4599 bp

atgcgtgtggtagaaatattgagccctaaaaaatgcattttgaatttcatagttagtacacatacgacatgtcgcttttccaatccaacacgacattacgacctgaaccgagcgcgccaaatcaacaaaaccgtccctccttcttcatcactctcttcactccctaaacccccaaaaaccatcgctgcaaattccccaatgggaaagcaaaagcagcaagtattatcgcgcttcttcgcgcccaaatccaaaccccaaaaccctccatcctcttcttcttcttctgccccaccattaaaccctaacaacccaccaacgccaccgcccaaaatcacagccaccgtcacctactcaccctccaagcgcctcctctcctcccaactcacctcttccccaaaacccaccaaactccccaagctctctccccacacccacaaccctataccccccacacccacacccaatccctccctccaccagagattcctccagaagctcctagaaccctccaccaacatcccccagccttcttccacccccaatccctcaaaccctaatctgacacctttggagcggcaggtcgtcgacctgaaaaagaggtactctgacgtgcttctcatggtggaagtcggttacaagtaccggtttttcggagaagatgcggaaatcgcggcgagaattttggggatttatgcacacatggatcatagtttcttgacggcgagtgtgcccactttccggctgaatgtccacgtcaggaggctggtgagtgctgggtacaaggtgggggtggtgaagcagaccgagacggcggcgatcaaggcccatggggcgaaccggggcggcccgtttgggagggggttgtcggcattgtacacgaaggcgacgctggaggcggcggaggatgtggggggaggggaggaggggtgtggtggggagagtagttacttggcttgtgtggtggatgagagtgggaatgtgggttgtggaggtgatggggggatggaagttaggattgggattgttgccgtggagatttcgactggggatgttgtgtatggagagtttagtgataattttatgaggagtgggcttgaggcttttgtggtgagcttgtctcctgctgagttgcttcttggggatcctctttcgaaacaaaccgagaagatgttacttgcttttgctggacctgcttcaaatgtccgcgtggagcgtgtctcgcgggattgcgtcaaagacggtggtgctctggctgaagtaatgtctttatatgaaaacatggatgaagataatttaggcgatcaaacaaggataaattcagaggttatagaaaagggtaatcatcacatgggaattgagggaatcatgaagttgccaaatttggcagtccaagcactggccctaactattcgtcatctgaaacaatttggtttagaaaggatccttcacctaggagcttctttcaggccattctcaagcaacatggaaatgactctctcagccaatgcacttcaacaactagaggtattgaagaacagcaatgatgggtctgagtctggctccttgctgcagtgtatgaatcatactcttaccatatatggttcaaggcttcttagacactgggtaactcaccctttatgtgatagaaacatgatttctgctcgtcttgatgctgtttctgagattgcagaatccatggggtcatctaaagcttgtcagattattaaagggggagatgcagatgattgtcatgtaacaatcttgaaaccagagttcaattatatactttcttcagttcttacaacactgggaaggtcacctgatattcagcgcgggattacaagaatctttcatcggactgccactccatctgagttcattgcagttattcaagctattttgcatgccggaaaacaacttcagcaacttcaaattgaagaggagggaagtgaaaaatttttgggagtaaagacagtgtgctctgagctgttgaggaagttgatattgactgcttcatcatccagtataattggaaatgctgcaaaacttttgtctacacttaacaaagaagcagctgaccaacaggatctacagaacctaatcgccatttctgatggccaatttcctgaggttgctaaagcaagaaaggaggttcaattggcaaatgagaaattgaattctctcattgggttataccgcaaacagcttggaatgcgtaagttggaattcatgagtgtgtccggaacaacacacttgatagagttggctgtagatgtaaaggtgccttcaacttgggttaagattaatagcaccaaaaaaacagtccggtatcacccacctgatgtcttgactgctctagatcatctagcccttgcaaaagaggaactcactgttgcctgtcgtgctgcttgggatagctttctaagtggattcagtaaatattttgccgagtttcaagctgctattcaggcactagccagtttagattgtctacattcacttgctgtgctttcaagaaataagaactatgtgcgtccagtgttcgtatatgatgatgaacctgttcagatacacatctgttctggacgtcacccggttttagagacgacattacaggacaactttgttccaaatgacacagatttacatactgacagagagtattgtcagataattactgggcccaacatgggtggaaagagttgttacattcgtcaagttgctctcattgctattatggcacaggttggctcatttgtaccagcgtcattggcaaaactgcatgtgttggatggcatctacactcgaatgggtgcttctgacagtatccaacaagggagaagcacctttcttgaagaactaagtgaggcatcacacatactccacaattgcacagcacgctcactggttatcattgatgagcttgggagaggcaccagcacacacgatggtgtggctattgcttacgctacattacatcatttgctacagcagaaaagatgcatggtcctctttgtcacacactatccaaaaattgcttctatcagaactgaattcccaggctcagtgggggcttaccatgtttcttacctgacttcagaacgggatagaggtacggtggacatgacatctgaaaatgaagatgtcacatacttgtataaacttgtgcctggtgtttcagagaggagttttggattcaaggttgcagagcttgctcagctaccttcctcttgcatcagacgagccactttcatggctgataggttggaggcagtagtaagaagccgagagagaaatagatatggcaacaagaggttgttaaaatcactgacaatagatcaaaaagaagaagtgcaagaggaaatgctgggatctcccaccaacgtttgtcgacgggagaatcagattaaagaagataaaattagcggtgaatacaaggaattctttctaaatctgaaaactgcaatatctagtgatgaccttccaaaaagcattcagtatttgaaccatgcaagaagcattgcacaagaattagctgaaactctcaacaaccaccaacaccaccaccaccaccactaccaccccaagcagcagatgactgataaaccctcctccagaacccgaaccgaaaagcattgcgatggagtaaggttgtccgggcaagtttggagatctggtgaaatggaagactgtgtctctgctgtgaggagatgggaggacttggagacggatattttggtcaagatttttcagtcgtttgatgtgtttgagttaacttccggaatagctcatgtttgtagtgggtggcgtttggcgtgctgtgatcctctgctgtggaagacgttggatttgtccatgatgaaatctaatttcatcaaaatcccgtcggagccttatgtatatgtggatgacccgtccgataagctcttgtctcgtttgttgaagatttccatgagtctcagcaggggaaacatcacgaccttgatttttcatttcaacttatatgtgagcgatgatcagttgacttatactgctgaaaggtgcccaaagctgaaacgactagttttgccaggttggaacagaataaaaaagacaggaatctgcaaggccatttcctgctggaaggatcttgaatccttgacaatgcctagcatagcgaatcccccatacttcatagaagagattgccaagaactgcaggaacttcagagaactaaagatcatgggtccttgtgatatcttttttgcttcaaccctagttgcatatcttcctaagctgaaggttttaagcctccggtgctcaatgctcctaagggaggctctcctcatgatattggagggcctaccacagctagaagttctgaatatttcgcattgccttcttttcgacctctctccatcgcctacttctaaaaaaattttgagagagatcgatccttttatccatgagaaggcctctcgactacgcaggtttttgacttgcagtcaagacacctgcgtgatgtgccaaaggacgaaaaccgacgaggggatcttgaggtggtacaagtatgaagaagggctatggaaagaagacgaggtgagctcccttgctcattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000217 GO:0000404 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030983 GO:0032135 GO:0032300 GO:0032991 GO:0033554 GO:0034641 GO:0042623 GO:0043170 GO:0043570 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko01524 ko03430 ko05200 ko05210 map01524 map03430 map05200 map05210

Pfam Domains

Protein Families

MutS_I MutS_II MutS_III MutS_IV MutS_V

Protein Analysis

1532

Amino Acids

170.53

Weight (kDa)

8.45

Isoelectric Point (pI)

47.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25540
fragaria_vesca	FvH4_7g29360
malus_domestica	MD07G1267600.v1.1
prunus_persica	Prupe.2G293300_v2.0.a1 Prupe.6G163500_v2.0.a1
pyrus_communis	pycom01g20970 pycom07g24520
rosa_chinensis	RchiOBHm_Chr1g0377121
rosa_laevigata	RLG00000026541
rosa_multiflora	Rmu_ssc0000155.1_g000018
rosa_roxburghii	Rroxscaffold_4G00281430
rosa_rugosa	Rorug01G0401600
rosa_samantha	Rh1AG419000 Rh1BG378100 Rh1CG392100 Rh1DG408800
rosa_wichuraiana	Rw1G036750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	4502
AatII	GACGTC	1 cut(s)	2590
Acc36I	ACCTGC	4 cut(s)	568, 1198, 4458, 4502
AccB1I	GGYRCC	3 cut(s)	2281, 2933, 4041
AccB7I	CCANNNNNTGG	1 cut(s)	1396
AccBSI	CCGCTC	1 cut(s)	574
AccI	GTMKAC	4 cut(s)	585, 2054, 2491, 3391
AccII	CGCG	7 cut(s)	115, 229, 239, 671, 1206, 1222, 1833
AccIII	TCCGGA	2 cut(s)	2240, 3779
AclI	AACGTT	1 cut(s)	3384
AcoI	YGGCCR	1 cut(s)	2116
AcuI	CTGAAG	6 cut(s)	1275, 1776, 1904, 3081, 4189, 4298
AcyI	GRCGYC	1 cut(s)	2587
AfaI	GTAC	8 cut(s)	58, 602, 641, 779, 875, 2760, 3115, 4544
AfiI	CCNNNNNNNGG	6 cut(s)	738, 1396, 2690, 4315, 4450, 4527
AflIII	ACRYGT	1 cut(s)	68
AgeI	ACCGGT	1 cut(s)	642
AhdI	GACNNNNNGTC	1 cut(s)	4482
AhlI	ACTAGT	1 cut(s)	4060
AjiI	CACGTC	2 cut(s)	610, 754
AjnI	CCWGG	3 cut(s)	3058, 3169, 4069
AjuI	GAANNNNNNNTTGG	4 cut(s)	999, 1031, 3022, 3054
AleI	CACNNNNGTG	2 cut(s)	2949, 4496
Alw21I	GWGCWC	4 cut(s)	1249, 1982, 4301, 4586
Alw26I	GTCTC	8 cut(s)	800, 1122, 1222, 2597, 3700, 3719, 3936, 3962
Aor13HI	TCCGGA	2 cut(s)	2240, 3779
AoxI	GGCC	9 cut(s)	822, 844, 1398, 1466, 2116, 2681, 4107, 4339, 4452
ApaI	GGGCCC	1 cut(s)	2685
ApeKI	GCWGC	8 cut(s)	185, 214, 1567, 2039, 2072, 2405, 2459, 3589
ArsI	GACNNNNNNTTYG	8 cut(s)	2036, 2068, 2307, 2339, 3718, 3750, 3832, 3864
AseI	ATTAAT	1 cut(s)	2304
AsiGI	ACCGGT	1 cut(s)	642
Asp700I	GAANNNNTTC	2 cut(s)	2562, 3444
AspA2I	CCTAGG	1 cut(s)	1450
AspLEI	GCGC	6 cut(s)	115, 117, 231, 241, 366, 1833
AspS9I	GGNCC	9 cut(s)	823, 845, 1187, 1399, 2681, 2682, 3007, 4226, 4339
AsuC2I	CCSGG	3 cut(s)	839, 2594, 3658
AsuII	TTCGAA	1 cut(s)	1151
AvaII	GGWCC	3 cut(s)	1187, 3007, 4226
AvrII	CCTAGG	1 cut(s)	1450
AxyI	CCTNAGG	2 cut(s)	2127, 4310
BaeGI	GKGCMC	3 cut(s)	732, 2685, 4046
BalI	TGGCCA	1 cut(s)	2118
BamHI	GGATCC	2 cut(s)	1141, 1440
BanI	GGYRCC	3 cut(s)	2281, 2933, 4041
BanII	GRGCYC	3 cut(s)	26, 2685, 4586
BbsI	GAAGAC	3 cut(s)	3693, 3845, 4578
Bbv12I	GWGCWC	4 cut(s)	1249, 1982, 4301, 4586
BbvI	GCAGC	8 cut(s)	172, 226, 1554, 2026, 2084, 2392, 2446, 3601
BceAI	ACGGC	3 cut(s)	735, 825, 1013
BciT130I	CCWGG	3 cut(s)	3060, 3171, 4071
BciVI	GTATCC	1 cut(s)	2837
BclI	TGATCA	1 cut(s)	4015
BcnI	CCSGG	3 cut(s)	839, 2594, 3658
BcoDI	GTCTC	8 cut(s)	800, 1122, 1222, 2597, 3700, 3719, 3936, 3962
BcuI	ACTAGT	1 cut(s)	4060
BfmI	CTRYAG	5 cut(s)	1568, 2090, 2268, 2987, 4195
BfoI	RGCGCY	1 cut(s)	367
BfuAI	ACCTGC	4 cut(s)	568, 1198, 4458, 4502
BfuI	GTATCC	1 cut(s)	2837
BglI	GCCNNNNNGGC	1 cut(s)	830
BglII	AGATCT	1 cut(s)	3671
BlnI	CCTAGG	1 cut(s)	1450
BlpI	GCTNAGC	1 cut(s)	3216
Bme1390I	CCNGG	6 cut(s)	839, 2594, 3060, 3171, 3658, 4071
Bme18I	GGWCC	3 cut(s)	1187, 3007, 4226
BmeRI	GACNNNNNGTC	1 cut(s)	4482
BmgBI	CACGTC	2 cut(s)	610, 754
BmgT120I	GGNCC	9 cut(s)	823, 845, 1187, 1399, 2681, 2682, 3007, 4226, 4339
BmiI	GGNNCC	9 cut(s)	1143, 1442, 1561, 2283, 2683, 2935, 3891, 4043, 4227
BmrFI	CCNGG	6 cut(s)	839, 2594, 3060, 3171, 3658, 4071
BmrI	ACTGGG	4 cut(s)	1053, 1630, 1817, 2688
BmsI	GCATC	7 cut(s)	649, 1660, 1726, 2805, 2879, 2990, 3243
BmuI	ACTGGG	4 cut(s)	1053, 1630, 1817, 2688
BpiI	GAAGAC	3 cut(s)	3693, 3845, 4578
BplI	GAGNNNNNCTC	9 cut(s)	1102, 1134, 1202, 1234, 1544, 1576, 4439, 4471, 4568
BpmI	CTGGAG	3 cut(s)	473, 911, 3598
Bpu10I	CCTNAGC	1 cut(s)	4272
Bpu1102I	GCTNAGC	1 cut(s)	3216
Bpu14I	TTCGAA	1 cut(s)	1151
BpuEI	CTTGAG	3 cut(s)	1115, 1459, 4555
BpuMI	CCSGG	3 cut(s)	839, 2594, 3658
Bsa29I	ATCGAT	1 cut(s)	4431
BsaBI	GATNNNNATC	1 cut(s)	2573
BsaHI	GRCGYC	1 cut(s)	2587
BsaJI	CCNNGG	6 cut(s)	826, 838, 1029, 1450, 1695, 3058
BsaWI	WCCGGW	5 cut(s)	642, 2240, 2325, 3779, 4293
Bsc4I	CCNNNNNNNGG	6 cut(s)	738, 1396, 2690, 4315, 4450, 4527
Bse118I	RCCGGY	1 cut(s)	642
Bse1I	ACTGG	9 cut(s)	1048, 1401, 1625, 1812, 2022, 2478, 2537, 2683, 2910
Bse21I	CCTNAGG	2 cut(s)	2127, 4310
Bse3DI	GCAATG	6 cut(s)	1546, 1878, 2727, 3519, 3634, 4372
Bse8I	GATNNNNATC	1 cut(s)	2573
BseAI	TCCGGA	2 cut(s)	2240, 3779
BseBI	CCWGG	3 cut(s)	3060, 3171, 4071
BseCI	ATCGAT	1 cut(s)	4431
BseDI	CCNNGG	6 cut(s)	826, 838, 1029, 1450, 1695, 3058
BseJI	GATNNNNATC	1 cut(s)	2573
BseLI	CCNNNNNNNGG	6 cut(s)	738, 1396, 2690, 4315, 4450, 4527
BseMI	GCAATG	6 cut(s)	1546, 1878, 2727, 3519, 3634, 4372
BseNI	ACTGG	9 cut(s)	1048, 1401, 1625, 1812, 2022, 2478, 2537, 2683, 2910
BsePI	GCGCGC	1 cut(s)	113
BseRI	GAGGAG	9 cut(s)	359, 364, 935, 1099, 1955, 3199, 3601, 3721, 4313
BseSI	GKGCMC	3 cut(s)	732, 2685, 4046
BseXI	GCAGC	8 cut(s)	172, 226, 1554, 2026, 2084, 2392, 2446, 3601
BseYI	CCCAGC	3 cut(s)	522, 773, 3367
Bsh1236I	CGCG	7 cut(s)	115, 229, 239, 671, 1206, 1222, 1833
BshFI	GGCC	9 cut(s)	824, 846, 1400, 1468, 2118, 2683, 4109, 4341, 4454
BshNI	GGYRCC	3 cut(s)	2281, 2933, 4041
BshTI	ACCGGT	1 cut(s)	642
BshVI	ATCGAT	1 cut(s)	4431
BsiHKAI	GWGCWC	4 cut(s)	1249, 1982, 4301, 4586
BslFI	GGGAC	1 cut(s)	119
BslI	CCNNNNNNNGG	6 cut(s)	738, 1396, 2690, 4315, 4450, 4527
BsmAI	GTCTC	8 cut(s)	800, 1122, 1222, 2597, 3700, 3719, 3936, 3962
BsmBI	CGTCTC	3 cut(s)	800, 2597, 3719
BsmFI	GGGAC	1 cut(s)	119
BsmI	GAATGC	2 cut(s)	2217, 3492
BsnI	GGCC	9 cut(s)	824, 846, 1400, 1468, 2118, 2683, 4109, 4341, 4454
Bsp119I	TTCGAA	1 cut(s)	1151
Bsp120I	GGGCCC	1 cut(s)	2681
Bsp1286I	GDGCHC	8 cut(s)	26, 732, 1249, 1982, 2685, 4046, 4301, 4586
Bsp13I	TCCGGA	2 cut(s)	2240, 3779
Bsp1407I	TGTACA	1 cut(s)	873
Bsp1720I	GCTNAGC	1 cut(s)	3216
Bsp19I	CCATGG	2 cut(s)	826, 1695
BspANI	GGCC	9 cut(s)	824, 846, 1400, 1468, 2118, 2683, 4109, 4341, 4454
BspDI	ATCGAT	1 cut(s)	4431
BspEI	TCCGGA	2 cut(s)	2240, 3779
BspFNI	CGCG	7 cut(s)	115, 229, 239, 671, 1206, 1222, 1833
BspHI	TCATGA	3 cut(s)	1365, 2229, 4326
BspLI	GGNNCC	9 cut(s)	1143, 1442, 1561, 2283, 2683, 2935, 3891, 4043, 4227
BspMAI	CTGCAG	2 cut(s)	1572, 4199
BspMI	ACCTGC	4 cut(s)	568, 1198, 4458, 4502
BspT104I	TTCGAA	1 cut(s)	1151
BspT107I	GGYRCC	3 cut(s)	2281, 2933, 4041
BsrBI	CCGCTC	1 cut(s)	574
BsrDI	GCAATG	6 cut(s)	1546, 1878, 2727, 3519, 3634, 4372
BsrFI	RCCGGY	1 cut(s)	642
BsrGI	TGTACA	1 cut(s)	873
BsrI	ACTGG	9 cut(s)	1048, 1401, 1625, 1812, 2022, 2478, 2537, 2683, 2910
BssAI	RCCGGY	1 cut(s)	642
BssECI	CCNNGG	6 cut(s)	826, 838, 1029, 1450, 1695, 3058
BssHII	GCGCGC	1 cut(s)	113
BssNI	GRCGYC	1 cut(s)	2587
BssT1I	CCWWGG	3 cut(s)	826, 1450, 1695
Bst2UI	CCWGG	3 cut(s)	3060, 3171, 4071
Bst4CI	ACNGT	9 cut(s)	133, 343, 1241, 1975, 2323, 2392, 2825, 3118, 3692
Bst6I	CTCTTC	5 cut(s)	160, 277, 394, 1932, 4173
BstACI	GRCGYC	1 cut(s)	2587
BstAPI	GCANNNNNTGC	1 cut(s)	3212
BstAUI	TGTACA	1 cut(s)	873
BstBI	TTCGAA	1 cut(s)	1151
BstC8I	GCNNGC	5 cut(s)	115, 1905, 2899, 3213, 3817
BstDSI	CCRYGG	3 cut(s)	826, 1029, 1695
BstEII	GGTNACC	1 cut(s)	1815
BstENI	CCTNNNNNAGG	1 cut(s)	4313
BstFNI	CGCG	7 cut(s)	115, 229, 239, 671, 1206, 1222, 1833
BstH2I	RGCGCY	1 cut(s)	367
BstHHI	GCGC	6 cut(s)	115, 117, 231, 241, 366, 1833
BstMAI	GTCTC	8 cut(s)	800, 1122, 1222, 2597, 3700, 3719, 3936, 3962
BstNI	CCWGG	3 cut(s)	3060, 3171, 4071
BstNSI	RCATGY	3 cut(s)	72, 1907, 2786
BstPI	GGTNACC	1 cut(s)	1815
BstSCI	CCNGG	6 cut(s)	837, 2592, 3058, 3169, 3656, 4069
BstSFI	CTRYAG	5 cut(s)	1568, 2090, 2268, 2987, 4195
BstSLI	GKGCMC	3 cut(s)	732, 2685, 4046
BstUI	CGCG	7 cut(s)	115, 229, 239, 671, 1206, 1222, 1833
BstV1I	GCAGC	8 cut(s)	172, 226, 1554, 2026, 2084, 2392, 2446, 3601
BstV2I	GAAGAC	3 cut(s)	3693, 3845, 4578
BstX2I	RGATCY	7 cut(s)	1141, 1440, 2086, 3371, 3671, 4126, 4530
BstXI	CCANNNNNNTGG	1 cut(s)	3253
BstYI	RGATCY	7 cut(s)	1141, 1440, 2086, 3371, 3671, 4126, 4530
Bsu15I	ATCGAT	1 cut(s)	4431
Bsu36I	CCTNAGG	2 cut(s)	2127, 4310
BsuI	GTATCC	1 cut(s)	2837
BsuRI	GGCC	9 cut(s)	824, 846, 1400, 1468, 2118, 2683, 4109, 4341, 4454
BsuTUI	ATCGAT	1 cut(s)	4431
BtgI	CCRYGG	3 cut(s)	826, 1029, 1695
BtgZI	GCGATG	4 cut(s)	166, 3654, 4026, 4383
BtrI	CACGTC	2 cut(s)	610, 754
BtsI	GCAGTG	1 cut(s)	1577
BveI	ACCTGC	4 cut(s)	568, 1198, 4458, 4502
Cac8I	GCNNGC	5 cut(s)	115, 1905, 2899, 3213, 3817
CciI	TCATGA	3 cut(s)	1365, 2229, 4326
CfoI	GCGC	6 cut(s)	115, 117, 231, 241, 366, 1833
Cfr10I	RCCGGY	1 cut(s)	642
Cfr13I	GGNCC	9 cut(s)	823, 845, 1187, 1399, 2681, 2682, 3007, 4226, 4339
ClaI	ATCGAT	1 cut(s)	4431
CseI	GACGC	4 cut(s)	895, 1219, 2522, 2754
Csp6I	GTAC	8 cut(s)	57, 601, 640, 778, 874, 2759, 3114, 4543
CspAI	ACCGGT	1 cut(s)	642
CspCI	CAANNNNNGTGG	4 cut(s)	1222, 1257, 2674, 2709
CviQI	GTAC	8 cut(s)	57, 601, 640, 778, 874, 2759, 3114, 4543
DriI	GACNNNNNGTC	1 cut(s)	4482
EaeI	YGGCCR	1 cut(s)	2116
Eam1104I	CTCTTC	5 cut(s)	160, 277, 394, 1932, 4173
Eam1105I	GACNNNNNGTC	1 cut(s)	4482
EarI	CTCTTC	5 cut(s)	160, 277, 394, 1932, 4173
EciI	GGCGGA	1 cut(s)	914
Ecl136II	GAGCTC	1 cut(s)	4584
Eco130I	CCWWGG	3 cut(s)	826, 1450, 1695
Eco147I	AGGCCT	1 cut(s)	4454
Eco24I	GRGCYC	3 cut(s)	26, 2685, 4586
Eco32I	GATATC	1 cut(s)	4237
Eco47I	GGWCC	3 cut(s)	1187, 3007, 4226
Eco53kI	GAGCTC	1 cut(s)	4584
Eco57I	CTGAAG	6 cut(s)	1275, 1776, 1904, 3081, 4189, 4298
Eco81I	CCTNAGG	2 cut(s)	2127, 4310
Eco91I	GGTNACC	1 cut(s)	1815
EcoICRI	GAGCTC	1 cut(s)	4584
EcoNI	CCTNNNNNAGG	1 cut(s)	4313
EcoO109I	RGGNCCY	2 cut(s)	4226, 4339
EcoO65I	GGTNACC	1 cut(s)	1815
EcoRI	GAATTC	4 cut(s)	2176, 2225, 3053, 3440
EcoRII	CCWGG	3 cut(s)	3058, 3169, 4069
EcoRV	GATATC	1 cut(s)	4237
EcoT14I	CCWWGG	3 cut(s)	826, 1450, 1695
EcoT22I	ATGCAT	2 cut(s)	38, 3005
EcoT38I	GRGCYC	3 cut(s)	26, 2685, 4586
ErhI	CCWWGG	3 cut(s)	826, 1450, 1695
Esp3I	CGTCTC	3 cut(s)	800, 2597, 3719
FalI	AAGNNNNNCTT	2 cut(s)	3428, 3460
FaqI	GGGAC	1 cut(s)	119
FauI	CCCGC	2 cut(s)	1215, 1826
FbaI	TGATCA	1 cut(s)	4015
FblI	GTMKAC	4 cut(s)	585, 2054, 2491, 3391
FriOI	GRGCYC	3 cut(s)	26, 2685, 4586
GlaI	GCGC	6 cut(s)	114, 116, 230, 240, 365, 1832
GsaI	CCCAGC	3 cut(s)	526, 777, 3371
GsuI	CTGGAG	3 cut(s)	473, 911, 3598
HaeII	RGCGCY	1 cut(s)	367
HaeIII	GGCC	9 cut(s)	824, 846, 1400, 1468, 2118, 2683, 4109, 4341, 4454
HgaI	GACGC	4 cut(s)	895, 1219, 2522, 2754
HhaI	GCGC	6 cut(s)	115, 117, 231, 241, 366, 1833
Hin1I	GRCGYC	1 cut(s)	2587
Hin6I	GCGC	6 cut(s)	113, 115, 229, 239, 364, 1831
HinP1I	GCGC	6 cut(s)	113, 115, 229, 239, 364, 1831
HincII	GTYRAC	4 cut(s)	586, 3392, 3774, 4023
HindII	GTYRAC	4 cut(s)	586, 3392, 3774, 4023
HindIII	AAGCTT	1 cut(s)	1710
HpaI	GTTAAC	1 cut(s)	3774
Hpy99I	CGWCG	5 cut(s)	587, 889, 3396, 3889, 4526
HpyCH4III	ACNGT	9 cut(s)	133, 343, 1241, 1975, 2323, 2392, 2825, 3118, 3692
HpyCH4IV	ACGT	5 cut(s)	609, 753, 2587, 3384, 3842
HpySE526I	ACGT	5 cut(s)	609, 753, 2587, 3384, 3842
Hsp92I	GRCGYC	1 cut(s)	2587
HspAI	GCGC	6 cut(s)	113, 115, 229, 239, 364, 1831
Kpn2I	TCCGGA	2 cut(s)	2240, 3779
Ksp22I	TGATCA	1 cut(s)	4015
KspAI	GTTAAC	1 cut(s)	3774
LmnI	GCTCC	8 cut(s)	501, 571, 1210, 1454, 1565, 3889, 4311, 4589
Lsp1109I	GCAGC	8 cut(s)	172, 226, 1554, 2026, 2084, 2392, 2446, 3601
LweI	GCATC	7 cut(s)	649, 1660, 1726, 2805, 2879, 2990, 3243
MaeII	ACGT	5 cut(s)	609, 753, 2587, 3384, 3842
MbiI	CCGCTC	1 cut(s)	574
MfeI	CAATTG	2 cut(s)	2156, 2887
MflI	RGATCY	7 cut(s)	1141, 1440, 2086, 3371, 3671, 4126, 4530
MhlI	GDGCHC	8 cut(s)	26, 732, 1249, 1982, 2685, 4046, 4301, 4586
MlsI	TGGCCA	1 cut(s)	2118
MluNI	TGGCCA	1 cut(s)	2118
MlyI	GAGTC	3 cut(s)	1486, 1562, 3964
MmeI	TCCRAC	8 cut(s)	110, 2202, 2769, 2854, 3246, 3825, 3867, 4055
Mox20I	TGGCCA	1 cut(s)	2118
Mph1103I	ATGCAT	2 cut(s)	38, 3005
MroI	TCCGGA	2 cut(s)	2240, 3779
MroXI	GAANNNNTTC	2 cut(s)	2562, 3444
MscI	TGGCCA	1 cut(s)	2118
MseI	TTAA	9 cut(s)	296, 1725, 2061, 2298, 2304, 3320, 3408, 3773, 4286
MslI	CAYNNNNRTG	7 cut(s)	1487, 2234, 2807, 2949, 3251, 3639, 4496
Msp20I	TGGCCA	1 cut(s)	2118
MspA1I	CMGCKG	1 cut(s)	2075
MspR9I	CCNGG	6 cut(s)	839, 2594, 3060, 3171, 3658, 4071
MunI	CAATTG	2 cut(s)	2156, 2887
Mva1269I	GAATGC	2 cut(s)	2217, 3492
MvaI	CCWGG	3 cut(s)	3060, 3171, 4071
MvnI	CGCG	7 cut(s)	115, 229, 239, 671, 1206, 1222, 1833
NciI	CCSGG	3 cut(s)	839, 2594, 3658
NcoI	CCATGG	2 cut(s)	826, 1695
NlaIV	GGNNCC	9 cut(s)	1143, 1442, 1561, 2283, 2683, 2935, 3891, 4043, 4227
NmeAIII	GCCGAG	2 cut(s)	2473, 3311
NmuCI	GTSAC	5 cut(s)	343, 1815, 2588, 3016, 3145
NsiI	ATGCAT	2 cut(s)	38, 3005
NspI	RCATGY	3 cut(s)	72, 1907, 2786
NspV	TTCGAA	1 cut(s)	1151
OliI	CACNNNNGTG	2 cut(s)	2949, 4496
PaeI	GCATGC	1 cut(s)	1907
PagI	TCATGA	3 cut(s)	1365, 2229, 4326
PaqCI	CACCTGC	1 cut(s)	4502
PauI	GCGCGC	1 cut(s)	113
PceI	AGGCCT	1 cut(s)	4454
PciI	ACATGT	1 cut(s)	68
PctI	GAATGC	2 cut(s)	2217, 3492
PdmI	GAANNNNTTC	2 cut(s)	2562, 3444
PflFI	GACNNNGTC	1 cut(s)	3692
PflMI	CCANNNNNTGG	1 cut(s)	1396
PinAI	ACCGGT	1 cut(s)	642
PleI	GAGTC	3 cut(s)	1486, 1561, 3963
PpsI	GAGTC	3 cut(s)	1486, 1561, 3963
PpuMI	RGGWCCY	1 cut(s)	4226
PscI	ACATGT	1 cut(s)	68
PshBI	ATTAAT	1 cut(s)	2304
Psp124BI	GAGCTC	1 cut(s)	4586
Psp1406I	AACGTT	1 cut(s)	3384
Psp5II	RGGWCCY	1 cut(s)	4226
Psp6I	CCWGG	3 cut(s)	3058, 3169, 4069
PspEI	GGTNACC	1 cut(s)	1815
PspFI	CCCAGC	3 cut(s)	522, 773, 3367
PspGI	CCWGG	3 cut(s)	3058, 3169, 4069
PspN4I	GGNNCC	9 cut(s)	1143, 1442, 1561, 2283, 2683, 2935, 3891, 4043, 4227
PspOMI	GGGCCC	1 cut(s)	2681
PspPI	GGNCC	9 cut(s)	823, 845, 1187, 1399, 2681, 2682, 3007, 4226, 4339
PspPPI	RGGWCCY	1 cut(s)	4226
PstI	CTGCAG	2 cut(s)	1572, 4199
PsuI	RGATCY	7 cut(s)	1141, 1440, 2086, 3371, 3671, 4126, 4530
PsyI	GACNNNGTC	1 cut(s)	3692
PteI	GCGCGC	1 cut(s)	113
PvuII	CAGCTG	1 cut(s)	2075
RsaI	GTAC	8 cut(s)	58, 602, 641, 779, 875, 2760, 3115, 4544
RsaNI	GTAC	8 cut(s)	57, 601, 640, 778, 874, 2759, 3114, 4543
RseI	CAYNNNNRTG	7 cut(s)	1487, 2234, 2807, 2949, 3251, 3639, 4496
SacI	GAGCTC	1 cut(s)	4586
SalI	GTCGAC	2 cut(s)	584, 3390
SaqAI	TTAA	9 cut(s)	296, 1725, 2061, 2298, 2304, 3320, 3408, 3773, 4286
Sau96I	GGNCC	9 cut(s)	823, 845, 1187, 1399, 2681, 2682, 3007, 4226, 4339
SchI	GAGTC	3 cut(s)	1486, 1562, 3964
ScrFI	CCNGG	6 cut(s)	839, 2594, 3060, 3171, 3658, 4071
SduI	GDGCHC	8 cut(s)	26, 732, 1249, 1982, 2685, 4046, 4301, 4586
SfaNI	GCATC	7 cut(s)	649, 1660, 1726, 2805, 2879, 2990, 3243
SfcI	CTRYAG	5 cut(s)	1568, 2090, 2268, 2987, 4195
SfuI	TTCGAA	1 cut(s)	1151
SinI	GGWCC	3 cut(s)	1187, 3007, 4226
SmiMI	CAYNNNNRTG	7 cut(s)	1487, 2234, 2807, 2949, 3251, 3639, 4496
SmlI	CTYRAG	3 cut(s)	1094, 1474, 4534
SmoI	CTYRAG	3 cut(s)	1094, 1474, 4534
SpeI	ACTAGT	1 cut(s)	4060
SphI	GCATGC	1 cut(s)	1907
SseBI	AGGCCT	1 cut(s)	4454
SspI	AATATT	3 cut(s)	18, 2441, 4366
SstI	GAGCTC	1 cut(s)	4586
StuI	AGGCCT	1 cut(s)	4454
StyD4I	CCNGG	6 cut(s)	837, 2592, 3058, 3169, 3656, 4069
StyI	CCWWGG	3 cut(s)	826, 1450, 1695
TaaI	ACNGT	9 cut(s)	133, 343, 1241, 1975, 2323, 2392, 2825, 3118, 3692
TaiI	ACGT	5 cut(s)	612, 756, 2590, 3387, 3845
TaqI	TCGA	8 cut(s)	585, 1040, 1151, 2806, 3391, 4386, 4431, 4459
TaqII	GACCGA	1 cut(s)	818
TatI	WGTACW	2 cut(s)	56, 873
TauI	GCSGC	5 cut(s)	577, 674, 815, 846, 899
Tru1I	TTAA	9 cut(s)	296, 1725, 2061, 2298, 2304, 3320, 3408, 3773, 4286
Tru9I	TTAA	9 cut(s)	296, 1725, 2061, 2298, 2304, 3320, 3408, 3773, 4286
TseFI	GTSAC	5 cut(s)	343, 1815, 2588, 3016, 3145
TseI	GCWGC	8 cut(s)	185, 214, 1567, 2039, 2072, 2405, 2459, 3589
Tsp45I	GTSAC	5 cut(s)	343, 1815, 2588, 3016, 3145
TspGWI	ACGGA	1 cut(s)	3743
Tth111I	GACNNNGTC	1 cut(s)	3692
Van91I	CCANNNNNTGG	1 cut(s)	1396
VpaK11BI	GGWCC	3 cut(s)	1187, 3007, 4226
VspI	ATTAAT	1 cut(s)	2304
XagI	CCTNNNNNAGG	1 cut(s)	4313
XbaI	TCTAGA	1 cut(s)	2356
XceI	RCATGY	3 cut(s)	72, 1907, 2786
XmaJI	CCTAGG	1 cut(s)	1450
XmiI	GTMKAC	4 cut(s)	585, 2054, 2491, 3391
XmnI	GAANNNNTTC	2 cut(s)	2562, 3444
ZraI	GACGTC	1 cut(s)	2588
Zsp2I	ATGCAT	2 cut(s)	38, 3005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.