DNA mismatch repair
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25540 |
| fragaria_vesca | FvH4_7g29360 |
| malus_domestica | MD07G1267600.v1.1 |
| prunus_persica | Prupe.2G293300_v2.0.a1 Prupe.6G163500_v2.0.a1 |
| pyrus_communis | pycom01g20970 pycom07g24520 |
| rosa_chinensis | RchiOBHm_Chr1g0377121 |
| rosa_laevigata | RLG00000026541 |
| rosa_multiflora | Rmu_ssc0000155.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00281430 |
| rosa_rugosa | Rorug01G0401600 |
| rosa_samantha | Rh1AG419000 Rh1BG378100 Rh1CG392100 Rh1DG408800 |
| rosa_wichuraiana | Rw1G036750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2452 |
| Acc36I | ACCTGC | 2 cut(s) | 493, 1123 |
| Acc65I | GGTACC | 1 cut(s) | 564 |
| AccB1I | GGYRCC | 3 cut(s) | 564, 2143, 2795 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1321 |
| AccBSI | CCGCTC | 1 cut(s) | 499 |
| AccI | GTMKAC | 3 cut(s) | 510, 1916, 2353 |
| AccII | CGCG | 7 cut(s) | 47, 162, 172, 596, 1131, 1147, 1695 |
| AclI | AACGTT | 1 cut(s) | 3201 |
| AclWI | GGATC | 7 cut(s) | 636, 1061, 1074, 1360, 1373, 1956, 3196 |
| AcoI | YGGCCR | 1 cut(s) | 1978 |
| AcuI | CTGAAG | 4 cut(s) | 1200, 1638, 1766, 2898 |
| AcyI | GRCGYC | 1 cut(s) | 2449 |
| AfaI | GTAC | 5 cut(s) | 527, 566, 800, 2622, 2932 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 663, 1321, 2552 |
| AgeI | ACCGGT | 1 cut(s) | 567 |
| AjiI | CACGTC | 2 cut(s) | 535, 679 |
| AjnI | CCWGG | 2 cut(s) | 2875, 2986 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 924, 956, 2839, 2871 |
| Alw21I | GWGCWC | 2 cut(s) | 1174, 1844 |
| Alw26I | GTCTC | 4 cut(s) | 725, 1047, 1147, 2459 |
| AlwI | GGATC | 7 cut(s) | 636, 1061, 1074, 1360, 1373, 1956, 3196 |
| AoxI | GGCC | 5 cut(s) | 747, 769, 1323, 1978, 2543 |
| ApaI | GGGCCC | 1 cut(s) | 2547 |
| ApeKI | GCWGC | 7 cut(s) | 118, 147, 1492, 1901, 1934, 2267, 2321 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1898, 1930, 2169, 2201 |
| AseI | ATTAAT | 1 cut(s) | 2166 |
| AsiGI | ACCGGT | 1 cut(s) | 567 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2424, 3261 |
| Asp718I | GGTACC | 1 cut(s) | 564 |
| AspA2I | CCTAGG | 1 cut(s) | 1375 |
| AspLEI | GCGC | 6 cut(s) | 47, 49, 164, 174, 297, 1695 |
| AspS9I | GGNCC | 7 cut(s) | 748, 770, 1112, 1324, 2543, 2544, 2822 |
| AsuC2I | CCSGG | 2 cut(s) | 764, 2456 |
| AvaII | GGWCC | 2 cut(s) | 1112, 2822 |
| AvrII | CCTAGG | 1 cut(s) | 1375 |
| AxyI | CCTNAGG | 1 cut(s) | 1989 |
| BaeGI | GKGCMC | 2 cut(s) | 657, 2547 |
| BalI | TGGCCA | 1 cut(s) | 1980 |
| BamHI | GGATCC | 2 cut(s) | 1066, 1365 |
| BanI | GGYRCC | 3 cut(s) | 564, 2143, 2795 |
| BanII | GRGCYC | 1 cut(s) | 2547 |
| Bbv12I | GWGCWC | 2 cut(s) | 1174, 1844 |
| BbvI | GCAGC | 7 cut(s) | 105, 159, 1479, 1888, 1946, 2254, 2308 |
| BccI | CCATC | 9 cut(s) | 22, 121, 207, 914, 922, 1738, 1970, 2648, 2804 |
| BceAI | ACGGC | 3 cut(s) | 660, 750, 938 |
| BciT130I | CCWGG | 2 cut(s) | 2877, 2988 |
| BciVI | GTATCC | 1 cut(s) | 2699 |
| BcnI | CCSGG | 2 cut(s) | 764, 2456 |
| BcoDI | GTCTC | 4 cut(s) | 725, 1047, 1147, 2459 |
| BfaI | CTAG | 7 cut(s) | 425, 1376, 1445, 2228, 2336, 2462, 3288 |
| BfmI | CTRYAG | 3 cut(s) | 1493, 1952, 2130 |
| BfoI | RGCGCY | 1 cut(s) | 298 |
| BfuAI | ACCTGC | 2 cut(s) | 493, 1123 |
| BfuI | GTATCC | 1 cut(s) | 2699 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 755 |
| BlnI | CCTAGG | 1 cut(s) | 1375 |
| BlpI | GCTNAGC | 1 cut(s) | 3033 |
| Bme1390I | CCNGG | 4 cut(s) | 764, 2456, 2877, 2988 |
| Bme18I | GGWCC | 2 cut(s) | 1112, 2822 |
| BmgBI | CACGTC | 2 cut(s) | 535, 679 |
| BmgT120I | GGNCC | 7 cut(s) | 748, 770, 1112, 1324, 2543, 2544, 2822 |
| BmiI | GGNNCC | 7 cut(s) | 566, 1068, 1367, 1486, 2145, 2545, 2797 |
| BmrFI | CCNGG | 4 cut(s) | 764, 2456, 2877, 2988 |
| BmrI | ACTGGG | 3 cut(s) | 978, 1555, 2550 |
| BmsI | GCATC | 6 cut(s) | 574, 1585, 2636, 2667, 2741, 3060 |
| BmuI | ACTGGG | 3 cut(s) | 978, 1555, 2550 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1027, 1059, 1127, 1159, 1469, 1501 |
| BpmI | CTGGAG | 2 cut(s) | 398, 836 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3033 |
| BpuEI | CTTGAG | 2 cut(s) | 1040, 1384 |
| BpuMI | CCSGG | 2 cut(s) | 764, 2456 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2435 |
| BsaHI | GRCGYC | 1 cut(s) | 2449 |
| BsaJI | CCNNGG | 6 cut(s) | 751, 763, 954, 1375, 1620, 2875 |
| BsaWI | WCCGGW | 2 cut(s) | 567, 2187 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 663, 1321, 2552 |
| Bse118I | RCCGGY | 1 cut(s) | 567 |
| Bse1I | ACTGG | 8 cut(s) | 973, 1326, 1550, 1884, 2340, 2399, 2545, 2772 |
| Bse21I | CCTNAGG | 1 cut(s) | 1989 |
| Bse3DI | GCAATG | 3 cut(s) | 1740, 2589, 3336 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2435 |
| BseBI | CCWGG | 2 cut(s) | 2877, 2988 |
| BseDI | CCNNGG | 6 cut(s) | 751, 763, 954, 1375, 1620, 2875 |
| BseJI | GATNNNNATC | 1 cut(s) | 2435 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 663, 1321, 2552 |
| BseMI | GCAATG | 3 cut(s) | 1740, 2589, 3336 |
| BseMII | CTCAG | 9 cut(s) | 1041, 1437, 1467, 1596, 1725, 1836, 1980, 2895, 3047 |
| BseNI | ACTGG | 8 cut(s) | 973, 1326, 1550, 1884, 2340, 2399, 2545, 2772 |
| BsePI | GCGCGC | 1 cut(s) | 45 |
| BseRI | GAGGAG | 6 cut(s) | 290, 295, 860, 1024, 1817, 3016 |
| BseSI | GKGCMC | 2 cut(s) | 657, 2547 |
| BseXI | GCAGC | 7 cut(s) | 105, 159, 1479, 1888, 1946, 2254, 2308 |
| BseYI | CCCAGC | 3 cut(s) | 447, 698, 3184 |
| BsgI | GTGCAG | 1 cut(s) | 3191 |
| Bsh1236I | CGCG | 7 cut(s) | 47, 162, 172, 596, 1131, 1147, 1695 |
| BshFI | GGCC | 5 cut(s) | 749, 771, 1325, 1980, 2545 |
| BshNI | GGYRCC | 3 cut(s) | 564, 2143, 2795 |
| BshTI | ACCGGT | 1 cut(s) | 567 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1174, 1844 |
| BsiSI | CCGG | 5 cut(s) | 568, 664, 763, 2188, 2456 |
| BslFI | GGGAC | 3 cut(s) | 51, 2119, 2346 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 663, 1321, 2552 |
| BsmAI | GTCTC | 4 cut(s) | 725, 1047, 1147, 2459 |
| BsmBI | CGTCTC | 2 cut(s) | 725, 2459 |
| BsmFI | GGGAC | 3 cut(s) | 51, 2119, 2346 |
| BsmI | GAATGC | 2 cut(s) | 2079, 3309 |
| BsnI | GGCC | 5 cut(s) | 749, 771, 1325, 1980, 2545 |
| Bsp120I | GGGCCC | 1 cut(s) | 2543 |
| Bsp1286I | GDGCHC | 4 cut(s) | 657, 1174, 1844, 2547 |
| Bsp1407I | TGTACA | 1 cut(s) | 798 |
| Bsp143I | GATC | 9 cut(s) | 628, 741, 1066, 1225, 1365, 1948, 2221, 3154, 3188 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3033 |
| Bsp19I | CCATGG | 2 cut(s) | 751, 1620 |
| BspANI | GGCC | 5 cut(s) | 749, 771, 1325, 1980, 2545 |
| BspCNI | CTCAG | 9 cut(s) | 1042, 1436, 1468, 1597, 1726, 1837, 1981, 2894, 3046 |
| BspFNI | CGCG | 7 cut(s) | 47, 162, 172, 596, 1131, 1147, 1695 |
| BspHI | TCATGA | 2 cut(s) | 1290, 2091 |
| BspLI | GGNNCC | 7 cut(s) | 566, 1068, 1367, 1486, 2145, 2545, 2797 |
| BspMAI | CTGCAG | 1 cut(s) | 1497 |
| BspMI | ACCTGC | 2 cut(s) | 493, 1123 |
| BspPI | GGATC | 7 cut(s) | 636, 1061, 1074, 1360, 1373, 1956, 3196 |
| BspT107I | GGYRCC | 3 cut(s) | 564, 2143, 2795 |
| BsrBI | CCGCTC | 1 cut(s) | 499 |
| BsrDI | GCAATG | 3 cut(s) | 1740, 2589, 3336 |
| BsrFI | RCCGGY | 1 cut(s) | 567 |
| BsrGI | TGTACA | 1 cut(s) | 798 |
| BsrI | ACTGG | 8 cut(s) | 973, 1326, 1550, 1884, 2340, 2399, 2545, 2772 |
| BssAI | RCCGGY | 1 cut(s) | 567 |
| BssECI | CCNNGG | 6 cut(s) | 751, 763, 954, 1375, 1620, 2875 |
| BssHII | GCGCGC | 1 cut(s) | 45 |
| BssMI | GATC | 9 cut(s) | 628, 741, 1066, 1225, 1365, 1948, 2221, 3154, 3188 |
| BssNI | GRCGYC | 1 cut(s) | 2449 |
| BssT1I | CCWWGG | 3 cut(s) | 751, 1375, 1620 |
| Bst2UI | CCWGG | 2 cut(s) | 2877, 2988 |
| Bst4CI | ACNGT | 8 cut(s) | 65, 274, 1166, 1837, 2185, 2254, 2687, 2935 |
| Bst6I | CTCTTC | 3 cut(s) | 92, 325, 1794 |
| BstACI | GRCGYC | 1 cut(s) | 2449 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3029 |
| BstAUI | TGTACA | 1 cut(s) | 798 |
| BstC8I | GCNNGC | 4 cut(s) | 47, 1767, 2761, 3030 |
| BstDSI | CCRYGG | 3 cut(s) | 751, 954, 1620 |
| BstEII | GGTNACC | 1 cut(s) | 1677 |
| BstFNI | CGCG | 7 cut(s) | 47, 162, 172, 596, 1131, 1147, 1695 |
| BstH2I | RGCGCY | 1 cut(s) | 298 |
| BstHHI | GCGC | 6 cut(s) | 47, 49, 164, 174, 297, 1695 |
| BstKTI | GATC | 9 cut(s) | 631, 744, 1069, 1228, 1368, 1951, 2224, 3157, 3191 |
| BstMAI | GTCTC | 4 cut(s) | 725, 1047, 1147, 2459 |
| BstMBI | GATC | 9 cut(s) | 628, 741, 1066, 1225, 1365, 1948, 2221, 3154, 3188 |
| BstNI | CCWGG | 2 cut(s) | 2877, 2988 |
| BstNSI | RCATGY | 2 cut(s) | 1769, 2648 |
| BstPI | GGTNACC | 1 cut(s) | 1677 |
| BstSCI | CCNGG | 4 cut(s) | 762, 2454, 2875, 2986 |
| BstSFI | CTRYAG | 3 cut(s) | 1493, 1952, 2130 |
| BstSLI | GKGCMC | 2 cut(s) | 657, 2547 |
| BstUI | CGCG | 7 cut(s) | 47, 162, 172, 596, 1131, 1147, 1695 |
| BstV1I | GCAGC | 7 cut(s) | 105, 159, 1479, 1888, 1946, 2254, 2308 |
| BstX2I | RGATCY | 4 cut(s) | 1066, 1365, 1948, 3188 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3070 |
| BstYI | RGATCY | 4 cut(s) | 1066, 1365, 1948, 3188 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1989 |
| BsuI | GTATCC | 1 cut(s) | 2699 |
| BsuRI | GGCC | 5 cut(s) | 749, 771, 1325, 1980, 2545 |
| BtgI | CCRYGG | 3 cut(s) | 751, 954, 1620 |
| BtgZI | GCGATG | 1 cut(s) | 99 |
| BtrI | CACGTC | 2 cut(s) | 535, 679 |
| BtsI | GCAGTG | 1 cut(s) | 1502 |
| BtsIMutI | CAGTG | 9 cut(s) | 1319, 1502, 1543, 2250, 2406, 2765, 2889, 2940, 3143 |
| BveI | ACCTGC | 2 cut(s) | 493, 1123 |
| Cac8I | GCNNGC | 4 cut(s) | 47, 1767, 2761, 3030 |
| CciI | TCATGA | 2 cut(s) | 1290, 2091 |
| CfoI | GCGC | 6 cut(s) | 47, 49, 164, 174, 297, 1695 |
| Cfr10I | RCCGGY | 1 cut(s) | 567 |
| Cfr13I | GGNCC | 7 cut(s) | 748, 770, 1112, 1324, 2543, 2544, 2822 |
| CseI | GACGC | 3 cut(s) | 820, 1144, 2384 |
| Csp6I | GTAC | 5 cut(s) | 526, 565, 799, 2621, 2931 |
| CspAI | ACCGGT | 1 cut(s) | 567 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1147, 1182, 2536, 2571, 3187, 3222 |
| CviQI | GTAC | 5 cut(s) | 526, 565, 799, 2621, 2931 |
| DpnI | GATC | 9 cut(s) | 630, 743, 1068, 1227, 1367, 1950, 2223, 3156, 3190 |
| DpnII | GATC | 9 cut(s) | 628, 741, 1066, 1225, 1365, 1948, 2221, 3154, 3188 |
| EaeI | YGGCCR | 1 cut(s) | 1978 |
| Eam1104I | CTCTTC | 3 cut(s) | 92, 325, 1794 |
| EarI | CTCTTC | 3 cut(s) | 92, 325, 1794 |
| EciI | GGCGGA | 1 cut(s) | 839 |
| Eco130I | CCWWGG | 3 cut(s) | 751, 1375, 1620 |
| Eco24I | GRGCYC | 1 cut(s) | 2547 |
| Eco47I | GGWCC | 2 cut(s) | 1112, 2822 |
| Eco57I | CTGAAG | 4 cut(s) | 1200, 1638, 1766, 2898 |
| Eco81I | CCTNAGG | 1 cut(s) | 1989 |
| Eco91I | GGTNACC | 1 cut(s) | 1677 |
| EcoO65I | GGTNACC | 1 cut(s) | 1677 |
| EcoRI | GAATTC | 4 cut(s) | 2038, 2087, 2870, 3257 |
| EcoRII | CCWGG | 2 cut(s) | 2875, 2986 |
| EcoT14I | CCWWGG | 3 cut(s) | 751, 1375, 1620 |
| EcoT22I | ATGCAT | 1 cut(s) | 2820 |
| EcoT38I | GRGCYC | 1 cut(s) | 2547 |
| ErhI | CCWWGG | 3 cut(s) | 751, 1375, 1620 |
| Esp3I | CGTCTC | 2 cut(s) | 725, 2459 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3245, 3277 |
| FaqI | GGGAC | 3 cut(s) | 51, 2119, 2346 |
| FauI | CCCGC | 2 cut(s) | 1140, 1688 |
| FblI | GTMKAC | 3 cut(s) | 510, 1916, 2353 |
| FokI | GGATG | 9 cut(s) | 186, 428, 842, 902, 940, 986, 1220, 1867, 2666 |
| FriOI | GRGCYC | 1 cut(s) | 2547 |
| FspBI | CTAG | 7 cut(s) | 425, 1376, 1445, 2228, 2336, 2462, 3288 |
| GlaI | GCGC | 6 cut(s) | 46, 48, 163, 173, 296, 1694 |
| GsaI | CCCAGC | 3 cut(s) | 451, 702, 3188 |
| GsuI | CTGGAG | 2 cut(s) | 398, 836 |
| HaeII | RGCGCY | 1 cut(s) | 298 |
| HaeIII | GGCC | 5 cut(s) | 749, 771, 1325, 1980, 2545 |
| HapII | CCGG | 5 cut(s) | 568, 664, 763, 2188, 2456 |
| HgaI | GACGC | 3 cut(s) | 820, 1144, 2384 |
| HhaI | GCGC | 6 cut(s) | 47, 49, 164, 174, 297, 1695 |
| Hin1I | GRCGYC | 1 cut(s) | 2449 |
| Hin6I | GCGC | 6 cut(s) | 45, 47, 162, 172, 295, 1693 |
| HinP1I | GCGC | 6 cut(s) | 45, 47, 162, 172, 295, 1693 |
| HincII | GTYRAC | 1 cut(s) | 511 |
| HindII | GTYRAC | 1 cut(s) | 511 |
| HpaII | CCGG | 5 cut(s) | 568, 664, 763, 2188, 2456 |
| Hpy166II | GTNNAC | 7 cut(s) | 511, 676, 801, 1917, 2354, 2938, 3209 |
| Hpy8I | GTNNAC | 7 cut(s) | 511, 676, 801, 1917, 2354, 2938, 3209 |
| Hpy99I | CGWCG | 2 cut(s) | 512, 814 |
| HpyAV | CCTTC | 8 cut(s) | 82, 213, 462, 799, 1379, 1668, 2157, 3051 |
| HpyCH4III | ACNGT | 8 cut(s) | 65, 274, 1166, 1837, 2185, 2254, 2687, 2935 |
| HpyCH4IV | ACGT | 4 cut(s) | 534, 678, 2449, 3201 |
| HpySE526I | ACGT | 4 cut(s) | 534, 678, 2449, 3201 |
| Hsp92I | GRCGYC | 1 cut(s) | 2449 |
| HspAI | GCGC | 6 cut(s) | 45, 47, 162, 172, 295, 1693 |
| KpnI | GGTACC | 1 cut(s) | 568 |
| Kzo9I | GATC | 9 cut(s) | 628, 741, 1066, 1225, 1365, 1948, 2221, 3154, 3188 |
| LmnI | GCTCC | 6 cut(s) | 223, 426, 496, 1135, 1379, 1490 |
| Lsp1109I | GCAGC | 7 cut(s) | 105, 159, 1479, 1888, 1946, 2254, 2308 |
| LweI | GCATC | 6 cut(s) | 574, 1585, 2636, 2667, 2741, 3060 |
| MaeI | CTAG | 7 cut(s) | 425, 1376, 1445, 2228, 2336, 2462, 3288 |
| MaeII | ACGT | 4 cut(s) | 534, 678, 2449, 3201 |
| MalI | GATC | 9 cut(s) | 630, 743, 1068, 1227, 1367, 1950, 2223, 3156, 3190 |
| MbiI | CCGCTC | 1 cut(s) | 499 |
| MboI | GATC | 9 cut(s) | 628, 741, 1066, 1225, 1365, 1948, 2221, 3154, 3188 |
| MfeI | CAATTG | 2 cut(s) | 2018, 2749 |
| MflI | RGATCY | 4 cut(s) | 1066, 1365, 1948, 3188 |
| MhlI | GDGCHC | 4 cut(s) | 657, 1174, 1844, 2547 |
| MlsI | TGGCCA | 1 cut(s) | 1980 |
| MluNI | TGGCCA | 1 cut(s) | 1980 |
| MlyI | GAGTC | 2 cut(s) | 1411, 1487 |
| MmeI | TCCRAC | 5 cut(s) | 42, 2064, 2631, 2716, 3063 |
| Mox20I | TGGCCA | 1 cut(s) | 1980 |
| Mph1103I | ATGCAT | 1 cut(s) | 2820 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2424, 3261 |
| MscI | TGGCCA | 1 cut(s) | 1980 |
| MseI | TTAA | 7 cut(s) | 227, 1923, 2160, 2166, 3137, 3225, 3361 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1412, 2096, 2669, 3068 |
| Msp20I | TGGCCA | 1 cut(s) | 1980 |
| MspA1I | CMGCKG | 1 cut(s) | 1937 |
| MspI | CCGG | 5 cut(s) | 568, 664, 763, 2188, 2456 |
| MspR9I | CCNGG | 4 cut(s) | 764, 2456, 2877, 2988 |
| MunI | CAATTG | 2 cut(s) | 2018, 2749 |
| Mva1269I | GAATGC | 2 cut(s) | 2079, 3309 |
| MvaI | CCWGG | 2 cut(s) | 2877, 2988 |
| MvnI | CGCG | 7 cut(s) | 47, 162, 172, 596, 1131, 1147, 1695 |
| NciI | CCSGG | 2 cut(s) | 764, 2456 |
| NcoI | CCATGG | 2 cut(s) | 751, 1620 |
| NdeII | GATC | 9 cut(s) | 628, 741, 1066, 1225, 1365, 1948, 2221, 3154, 3188 |
| NlaIV | GGNNCC | 7 cut(s) | 566, 1068, 1367, 1486, 2145, 2545, 2797 |
| NmeAIII | GCCGAG | 2 cut(s) | 2335, 3128 |
| NmuCI | GTSAC | 5 cut(s) | 274, 1677, 2450, 2831, 2962 |
| NsiI | ATGCAT | 1 cut(s) | 2820 |
| NspI | RCATGY | 2 cut(s) | 1769, 2648 |
| PaeI | GCATGC | 1 cut(s) | 1769 |
| PagI | TCATGA | 2 cut(s) | 1290, 2091 |
| PauI | GCGCGC | 1 cut(s) | 45 |
| PctI | GAATGC | 2 cut(s) | 2079, 3309 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2424, 3261 |
| PfeI | GAWTC | 8 cut(s) | 408, 1287, 1504, 1616, 1707, 2292, 3012, 3217 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1321 |
| PinAI | ACCGGT | 1 cut(s) | 567 |
| PleI | GAGTC | 2 cut(s) | 1411, 1486 |
| PpsI | GAGTC | 2 cut(s) | 1411, 1486 |
| PshBI | ATTAAT | 1 cut(s) | 2166 |
| Psp1406I | AACGTT | 1 cut(s) | 3201 |
| Psp6I | CCWGG | 2 cut(s) | 2875, 2986 |
| PspEI | GGTNACC | 1 cut(s) | 1677 |
| PspFI | CCCAGC | 3 cut(s) | 447, 698, 3184 |
| PspGI | CCWGG | 2 cut(s) | 2875, 2986 |
| PspN4I | GGNNCC | 7 cut(s) | 566, 1068, 1367, 1486, 2145, 2545, 2797 |
| PspOMI | GGGCCC | 1 cut(s) | 2543 |
| PspPI | GGNCC | 7 cut(s) | 748, 770, 1112, 1324, 2543, 2544, 2822 |
| PstI | CTGCAG | 1 cut(s) | 1497 |
| PsuI | RGATCY | 4 cut(s) | 1066, 1365, 1948, 3188 |
| PteI | GCGCGC | 1 cut(s) | 45 |
| PvuII | CAGCTG | 1 cut(s) | 1937 |
| RsaI | GTAC | 5 cut(s) | 527, 566, 800, 2622, 2932 |
| RsaNI | GTAC | 5 cut(s) | 526, 565, 799, 2621, 2931 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1412, 2096, 2669, 3068 |
| SalI | GTCGAC | 1 cut(s) | 509 |
| SaqAI | TTAA | 7 cut(s) | 227, 1923, 2160, 2166, 3137, 3225, 3361 |
| Sau3AI | GATC | 9 cut(s) | 628, 741, 1066, 1225, 1365, 1948, 2221, 3154, 3188 |
| Sau96I | GGNCC | 7 cut(s) | 748, 770, 1112, 1324, 2543, 2544, 2822 |
| SchI | GAGTC | 2 cut(s) | 1411, 1487 |
| ScrFI | CCNGG | 4 cut(s) | 764, 2456, 2877, 2988 |
| SduI | GDGCHC | 4 cut(s) | 657, 1174, 1844, 2547 |
| SfaNI | GCATC | 6 cut(s) | 574, 1585, 2636, 2667, 2741, 3060 |
| SfcI | CTRYAG | 3 cut(s) | 1493, 1952, 2130 |
| SinI | GGWCC | 2 cut(s) | 1112, 2822 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1412, 2096, 2669, 3068 |
| SmlI | CTYRAG | 2 cut(s) | 1019, 1399 |
| SmoI | CTYRAG | 2 cut(s) | 1019, 1399 |
| SphI | GCATGC | 1 cut(s) | 1769 |
| SspI | AATATT | 1 cut(s) | 2303 |
| SspMI | CTAG | 7 cut(s) | 425, 1376, 1445, 2228, 2336, 2462, 3288 |
| StyD4I | CCNGG | 4 cut(s) | 762, 2454, 2875, 2986 |
| StyI | CCWWGG | 3 cut(s) | 751, 1375, 1620 |
| TaaI | ACNGT | 8 cut(s) | 65, 274, 1166, 1837, 2185, 2254, 2687, 2935 |
| TaiI | ACGT | 4 cut(s) | 537, 681, 2452, 3204 |
| TaqI | TCGA | 3 cut(s) | 510, 965, 2668 |
| TaqII | GACCGA | 1 cut(s) | 743 |
| TatI | WGTACW | 1 cut(s) | 798 |
| TauI | GCSGC | 5 cut(s) | 502, 599, 740, 771, 824 |
| TfiI | GAWTC | 8 cut(s) | 408, 1287, 1504, 1616, 1707, 2292, 3012, 3217 |
| Tru1I | TTAA | 7 cut(s) | 227, 1923, 2160, 2166, 3137, 3225, 3361 |
| Tru9I | TTAA | 7 cut(s) | 227, 1923, 2160, 2166, 3137, 3225, 3361 |
| TscAI | CASTG | 9 cut(s) | 1326, 1502, 1550, 2257, 2406, 2772, 2889, 2940, 3150 |
| TseFI | GTSAC | 5 cut(s) | 274, 1677, 2450, 2831, 2962 |
| TseI | GCWGC | 7 cut(s) | 118, 147, 1492, 1901, 1934, 2267, 2321 |
| Tsp45I | GTSAC | 5 cut(s) | 274, 1677, 2450, 2831, 2962 |
| TspRI | CASTG | 9 cut(s) | 1326, 1502, 1550, 2257, 2406, 2772, 2889, 2940, 3150 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1321 |
| VpaK11BI | GGWCC | 2 cut(s) | 1112, 2822 |
| VspI | ATTAAT | 1 cut(s) | 2166 |
| XbaI | TCTAGA | 1 cut(s) | 2461 |
| XceI | RCATGY | 2 cut(s) | 1769, 2648 |
| XmaJI | CCTAGG | 1 cut(s) | 1375 |
| XmiI | GTMKAC | 3 cut(s) | 510, 1916, 2353 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2424, 3261 |
| XspI | CTAG | 7 cut(s) | 425, 1376, 1445, 2228, 2336, 2462, 3288 |
| ZraI | GACGTC | 1 cut(s) | 2450 |
| Zsp2I | ATGCAT | 1 cut(s) | 2820 |