DNA mismatch repair
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25540 |
| fragaria_vesca | FvH4_7g29360 |
| malus_domestica | MD07G1267600.v1.1 |
| prunus_persica | Prupe.2G293300_v2.0.a1 Prupe.6G163500_v2.0.a1 |
| pyrus_communis | pycom01g20970 pycom07g24520 |
| rosa_chinensis | RchiOBHm_Chr1g0377121 |
| rosa_laevigata | RLG00000026541 |
| rosa_multiflora | Rmu_ssc0000155.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00281430 |
| rosa_rugosa | Rorug01G0401600 |
| rosa_samantha | Rh1AG419000 Rh1BG378100 Rh1CG392100 Rh1DG408800 |
| rosa_wichuraiana | Rw1G036750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2389 |
| Acc36I | ACCTGC | 3 cut(s) | 367, 997, 3330 |
| Acc65I | GGTACC | 1 cut(s) | 438 |
| AccB1I | GGYRCC | 3 cut(s) | 438, 2080, 2732 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1195 |
| AccBSI | CCGCTC | 1 cut(s) | 373 |
| AccI | GTMKAC | 4 cut(s) | 247, 384, 1853, 2290 |
| AccII | CGCG | 5 cut(s) | 31, 41, 470, 1005, 1021 |
| AccIII | TCCGGA | 1 cut(s) | 2039 |
| AclI | AACGTT | 1 cut(s) | 3183 |
| AclWI | GGATC | 7 cut(s) | 510, 935, 948, 1234, 1247, 1893, 3178 |
| AcoI | YGGCCR | 1 cut(s) | 1915 |
| AcsI | RAATTY | 8 cut(s) | 477, 1114, 1177, 1755, 1975, 2024, 2852, 3239 |
| AcuI | CTGAAG | 4 cut(s) | 1074, 1575, 1703, 2880 |
| AcvI | CACGTG | 1 cut(s) | 2584 |
| AcyI | GRCGYC | 1 cut(s) | 2386 |
| AfaI | GTAC | 7 cut(s) | 401, 440, 578, 674, 2559, 2914, 2951 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 537, 1195, 2489 |
| AflIII | ACRYGT | 1 cut(s) | 2583 |
| AgeI | ACCGGT | 1 cut(s) | 441 |
| AjiI | CACGTC | 2 cut(s) | 409, 553 |
| AjnI | CCWGG | 2 cut(s) | 2857, 2968 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 798, 830, 2821, 2853, 3204, 3236 |
| AleI | CACNNNNGTG | 1 cut(s) | 2748 |
| Alw21I | GWGCWC | 2 cut(s) | 1048, 1781 |
| Alw26I | GTCTC | 4 cut(s) | 599, 921, 1021, 2396 |
| AlwI | GGATC | 7 cut(s) | 510, 935, 948, 1234, 1247, 1893, 3178 |
| Aor13HI | TCCGGA | 1 cut(s) | 2039 |
| AoxI | GGCC | 6 cut(s) | 621, 643, 1197, 1265, 1915, 2480 |
| ApaI | GGGCCC | 1 cut(s) | 2484 |
| ApeKI | GCWGC | 6 cut(s) | 16, 1366, 1838, 1871, 2204, 2258 |
| ApoI | RAATTY | 8 cut(s) | 477, 1114, 1177, 1755, 1975, 2024, 2852, 3239 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1835, 1867, 2106, 2138 |
| AseI | ATTAAT | 1 cut(s) | 2103 |
| AsiGI | ACCGGT | 1 cut(s) | 441 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2361, 3243 |
| Asp718I | GGTACC | 1 cut(s) | 438 |
| AspA2I | CCTAGG | 1 cut(s) | 1249 |
| AspLEI | GCGC | 3 cut(s) | 33, 43, 171 |
| AspS9I | GGNCC | 7 cut(s) | 622, 644, 986, 1198, 2480, 2481, 2806 |
| AsuC2I | CCSGG | 3 cut(s) | 638, 844, 2393 |
| AsuII | TTCGAA | 1 cut(s) | 950 |
| AvaII | GGWCC | 2 cut(s) | 986, 2806 |
| AvrII | CCTAGG | 1 cut(s) | 1249 |
| AxyI | CCTNAGG | 1 cut(s) | 1926 |
| BaeGI | GKGCMC | 2 cut(s) | 531, 2484 |
| BalI | TGGCCA | 1 cut(s) | 1917 |
| BamHI | GGATCC | 2 cut(s) | 940, 1239 |
| BanI | GGYRCC | 3 cut(s) | 438, 2080, 2732 |
| BanII | GRGCYC | 1 cut(s) | 2484 |
| BbrPI | CACGTG | 1 cut(s) | 2584 |
| Bbv12I | GWGCWC | 2 cut(s) | 1048, 1781 |
| BbvI | GCAGC | 6 cut(s) | 28, 1353, 1825, 1883, 2191, 2245 |
| BccI | CCATC | 8 cut(s) | 76, 788, 796, 1337, 1675, 1907, 2585, 2741 |
| BceAI | ACGGC | 2 cut(s) | 534, 624 |
| BciT130I | CCWGG | 2 cut(s) | 2859, 2970 |
| BciVI | GTATCC | 1 cut(s) | 2636 |
| BcnI | CCSGG | 3 cut(s) | 638, 844, 2393 |
| BcoDI | GTCTC | 4 cut(s) | 599, 921, 1021, 2396 |
| BfaI | CTAG | 6 cut(s) | 299, 1250, 1319, 2165, 2273, 3270 |
| BfmI | CTRYAG | 4 cut(s) | 1367, 1889, 2067, 2786 |
| BfoI | RGCGCY | 1 cut(s) | 172 |
| BfuAI | ACCTGC | 3 cut(s) | 367, 997, 3330 |
| BfuI | GTATCC | 1 cut(s) | 2636 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 629 |
| BlnI | CCTAGG | 1 cut(s) | 1249 |
| BlpI | GCTNAGC | 1 cut(s) | 3015 |
| Bme1390I | CCNGG | 5 cut(s) | 638, 844, 2393, 2859, 2970 |
| Bme18I | GGWCC | 2 cut(s) | 986, 2806 |
| BmgBI | CACGTC | 2 cut(s) | 409, 553 |
| BmgT120I | GGNCC | 7 cut(s) | 622, 644, 986, 1198, 2480, 2481, 2806 |
| BmiI | GGNNCC | 7 cut(s) | 440, 942, 1241, 1360, 2082, 2482, 2734 |
| BmrFI | CCNGG | 5 cut(s) | 638, 844, 2393, 2859, 2970 |
| BmrI | ACTGGG | 2 cut(s) | 1429, 2487 |
| BmsI | GCATC | 8 cut(s) | 448, 1459, 1525, 2573, 2604, 2678, 2789, 3042 |
| BmuI | ACTGGG | 2 cut(s) | 1429, 2487 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 901, 933, 1001, 1033, 1343, 1375 |
| BpmI | CTGGAG | 2 cut(s) | 272, 710 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3015 |
| Bpu14I | TTCGAA | 1 cut(s) | 950 |
| BpuEI | CTTGAG | 2 cut(s) | 914, 1258 |
| BpuMI | CCSGG | 3 cut(s) | 638, 844, 2393 |
| BsaAI | YACGTR | 2 cut(s) | 2584, 2949 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2372 |
| BsaHI | GRCGYC | 1 cut(s) | 2386 |
| BsaJI | CCNNGG | 6 cut(s) | 625, 637, 843, 1249, 1494, 2857 |
| BsaWI | WCCGGW | 3 cut(s) | 441, 2039, 2124 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 146, 176, 710, 740, 1648, 1678, 2664, 2694 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 537, 1195, 2489 |
| Bse118I | RCCGGY | 1 cut(s) | 441 |
| Bse1I | ACTGG | 7 cut(s) | 1200, 1424, 1821, 2277, 2336, 2482, 2709 |
| Bse21I | CCTNAGG | 1 cut(s) | 1926 |
| Bse3DI | GCAATG | 4 cut(s) | 1345, 1677, 2526, 3318 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2372 |
| BseAI | TCCGGA | 1 cut(s) | 2039 |
| BseBI | CCWGG | 2 cut(s) | 2859, 2970 |
| BseDI | CCNNGG | 6 cut(s) | 625, 637, 843, 1249, 1494, 2857 |
| BseGI | GGATG | 9 cut(s) | 68, 315, 709, 769, 807, 853, 1087, 1817, 2596 |
| BseJI | GATNNNNATC | 1 cut(s) | 2372 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 537, 1195, 2489 |
| BseMI | GCAATG | 4 cut(s) | 1345, 1677, 2526, 3318 |
| BseMII | CTCAG | 9 cut(s) | 915, 1311, 1341, 1470, 1662, 1773, 1917, 2877, 3029 |
| BseNI | ACTGG | 7 cut(s) | 1200, 1424, 1821, 2277, 2336, 2482, 2709 |
| BseRI | GAGGAG | 6 cut(s) | 164, 169, 734, 898, 1754, 2998 |
| BseSI | GKGCMC | 2 cut(s) | 531, 2484 |
| BseXI | GCAGC | 6 cut(s) | 28, 1353, 1825, 1883, 2191, 2245 |
| BseYI | CCCAGC | 3 cut(s) | 321, 572, 3166 |
| BsgI | GTGCAG | 1 cut(s) | 2564 |
| Bsh1236I | CGCG | 5 cut(s) | 31, 41, 470, 1005, 1021 |
| Bsh1285I | CGRYCG | 1 cut(s) | 843 |
| BshFI | GGCC | 6 cut(s) | 623, 645, 1199, 1267, 1917, 2482 |
| BshNI | GGYRCC | 3 cut(s) | 438, 2080, 2732 |
| BshTI | ACCGGT | 1 cut(s) | 441 |
| BsiEI | CGRYCG | 1 cut(s) | 843 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1048, 1781 |
| BsiSI | CCGG | 8 cut(s) | 442, 538, 637, 843, 1707, 2040, 2125, 2393 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 537, 1195, 2489 |
| BsmAI | GTCTC | 4 cut(s) | 599, 921, 1021, 2396 |
| BsmBI | CGTCTC | 2 cut(s) | 599, 2396 |
| BsmI | GAATGC | 2 cut(s) | 2016, 3291 |
| BsnI | GGCC | 6 cut(s) | 623, 645, 1199, 1267, 1917, 2482 |
| Bsp119I | TTCGAA | 1 cut(s) | 950 |
| Bsp120I | GGGCCC | 1 cut(s) | 2480 |
| Bsp1286I | GDGCHC | 4 cut(s) | 531, 1048, 1781, 2484 |
| Bsp13I | TCCGGA | 1 cut(s) | 2039 |
| Bsp1407I | TGTACA | 1 cut(s) | 672 |
| Bsp143I | GATC | 9 cut(s) | 502, 615, 940, 1099, 1239, 1885, 2158, 3136, 3170 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3015 |
| Bsp19I | CCATGG | 2 cut(s) | 625, 1494 |
| BspANI | GGCC | 6 cut(s) | 623, 645, 1199, 1267, 1917, 2482 |
| BspCNI | CTCAG | 9 cut(s) | 916, 1310, 1342, 1471, 1663, 1774, 1918, 2876, 3028 |
| BspEI | TCCGGA | 1 cut(s) | 2039 |
| BspFNI | CGCG | 5 cut(s) | 31, 41, 470, 1005, 1021 |
| BspHI | TCATGA | 2 cut(s) | 1164, 2028 |
| BspLI | GGNNCC | 7 cut(s) | 440, 942, 1241, 1360, 2082, 2482, 2734 |
| BspMAI | CTGCAG | 1 cut(s) | 1371 |
| BspMI | ACCTGC | 3 cut(s) | 367, 997, 3330 |
| BspPI | GGATC | 7 cut(s) | 510, 935, 948, 1234, 1247, 1893, 3178 |
| BspT104I | TTCGAA | 1 cut(s) | 950 |
| BspT107I | GGYRCC | 3 cut(s) | 438, 2080, 2732 |
| BsrBI | CCGCTC | 1 cut(s) | 373 |
| BsrDI | GCAATG | 4 cut(s) | 1345, 1677, 2526, 3318 |
| BsrFI | RCCGGY | 1 cut(s) | 441 |
| BsrGI | TGTACA | 1 cut(s) | 672 |
| BsrI | ACTGG | 7 cut(s) | 1200, 1424, 1821, 2277, 2336, 2482, 2709 |
| BssAI | RCCGGY | 1 cut(s) | 441 |
| BssECI | CCNNGG | 6 cut(s) | 625, 637, 843, 1249, 1494, 2857 |
| BssMI | GATC | 9 cut(s) | 502, 615, 940, 1099, 1239, 1885, 2158, 3136, 3170 |
| BssNAI | GTATAC | 1 cut(s) | 248 |
| BssNI | GRCGYC | 1 cut(s) | 2386 |
| BssT1I | CCWWGG | 3 cut(s) | 625, 1249, 1494 |
| Bst1107I | GTATAC | 1 cut(s) | 248 |
| Bst2UI | CCWGG | 2 cut(s) | 2859, 2970 |
| Bst4CI | ACNGT | 8 cut(s) | 148, 245, 1040, 1774, 2122, 2191, 2624, 2917 |
| Bst6I | CTCTTC | 4 cut(s) | 79, 199, 1731, 2722 |
| BstACI | GRCGYC | 1 cut(s) | 2386 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3011 |
| BstAUI | TGTACA | 1 cut(s) | 672 |
| BstBAI | YACGTR | 2 cut(s) | 2584, 2949 |
| BstBI | TTCGAA | 1 cut(s) | 950 |
| BstC8I | GCNNGC | 3 cut(s) | 1704, 2698, 3012 |
| BstDSI | CCRYGG | 2 cut(s) | 625, 1494 |
| BstEII | GGTNACC | 1 cut(s) | 1614 |
| BstF5I | GGATG | 9 cut(s) | 68, 315, 709, 769, 807, 853, 1087, 1817, 2596 |
| BstFNI | CGCG | 5 cut(s) | 31, 41, 470, 1005, 1021 |
| BstH2I | RGCGCY | 1 cut(s) | 172 |
| BstHHI | GCGC | 3 cut(s) | 33, 43, 171 |
| BstKTI | GATC | 9 cut(s) | 505, 618, 943, 1102, 1242, 1888, 2161, 3139, 3173 |
| BstMAI | GTCTC | 4 cut(s) | 599, 921, 1021, 2396 |
| BstMBI | GATC | 9 cut(s) | 502, 615, 940, 1099, 1239, 1885, 2158, 3136, 3170 |
| BstMCI | CGRYCG | 1 cut(s) | 843 |
| BstNI | CCWGG | 2 cut(s) | 2859, 2970 |
| BstNSI | RCATGY | 1 cut(s) | 1706 |
| BstPI | GGTNACC | 1 cut(s) | 1614 |
| BstSCI | CCNGG | 5 cut(s) | 636, 842, 2391, 2857, 2968 |
| BstSFI | CTRYAG | 4 cut(s) | 1367, 1889, 2067, 2786 |
| BstSLI | GKGCMC | 2 cut(s) | 531, 2484 |
| BstUI | CGCG | 5 cut(s) | 31, 41, 470, 1005, 1021 |
| BstV1I | GCAGC | 6 cut(s) | 28, 1353, 1825, 1883, 2191, 2245 |
| BstX2I | RGATCY | 4 cut(s) | 940, 1239, 1885, 3170 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3052 |
| BstYI | RGATCY | 4 cut(s) | 940, 1239, 1885, 3170 |
| BstZ17I | GTATAC | 1 cut(s) | 248 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1926 |
| BsuI | GTATCC | 1 cut(s) | 2636 |
| BsuRI | GGCC | 6 cut(s) | 623, 645, 1199, 1267, 1917, 2482 |
| BtgI | CCRYGG | 2 cut(s) | 625, 1494 |
| BtrI | CACGTC | 2 cut(s) | 409, 553 |
| BtsCI | GGATG | 9 cut(s) | 68, 315, 709, 769, 807, 853, 1087, 1817, 2596 |
| BtsI | GCAGTG | 1 cut(s) | 1376 |
| BtsIMutI | CAGTG | 8 cut(s) | 1193, 1376, 1417, 1779, 2187, 2343, 2702, 2871 |
| BveI | ACCTGC | 3 cut(s) | 367, 997, 3330 |
| Cac8I | GCNNGC | 3 cut(s) | 1704, 2698, 3012 |
| CciI | TCATGA | 2 cut(s) | 1164, 2028 |
| CfoI | GCGC | 3 cut(s) | 33, 43, 171 |
| Cfr10I | RCCGGY | 1 cut(s) | 441 |
| Cfr13I | GGNCC | 7 cut(s) | 622, 644, 986, 1198, 2480, 2481, 2806 |
| CseI | GACGC | 3 cut(s) | 694, 1018, 2321 |
| Csp6I | GTAC | 7 cut(s) | 400, 439, 577, 673, 2558, 2913, 2950 |
| CspAI | ACCGGT | 1 cut(s) | 441 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1021, 1056, 2473, 2508, 3169, 3204 |
| CviQI | GTAC | 7 cut(s) | 400, 439, 577, 673, 2558, 2913, 2950 |
| DpnI | GATC | 9 cut(s) | 504, 617, 942, 1101, 1241, 1887, 2160, 3138, 3172 |
| DpnII | GATC | 9 cut(s) | 502, 615, 940, 1099, 1239, 1885, 2158, 3136, 3170 |
| EaeI | YGGCCR | 1 cut(s) | 1915 |
| Eam1104I | CTCTTC | 4 cut(s) | 79, 199, 1731, 2722 |
| EarI | CTCTTC | 4 cut(s) | 79, 199, 1731, 2722 |
| EciI | GGCGGA | 1 cut(s) | 713 |
| Eco130I | CCWWGG | 3 cut(s) | 625, 1249, 1494 |
| Eco24I | GRGCYC | 1 cut(s) | 2484 |
| Eco47I | GGWCC | 2 cut(s) | 986, 2806 |
| Eco57I | CTGAAG | 4 cut(s) | 1074, 1575, 1703, 2880 |
| Eco72I | CACGTG | 1 cut(s) | 2584 |
| Eco81I | CCTNAGG | 1 cut(s) | 1926 |
| Eco91I | GGTNACC | 1 cut(s) | 1614 |
| EcoO65I | GGTNACC | 1 cut(s) | 1614 |
| EcoRI | GAATTC | 4 cut(s) | 1975, 2024, 2852, 3239 |
| EcoRII | CCWGG | 2 cut(s) | 2857, 2968 |
| EcoT14I | CCWWGG | 3 cut(s) | 625, 1249, 1494 |
| EcoT22I | ATGCAT | 1 cut(s) | 2804 |
| EcoT38I | GRGCYC | 1 cut(s) | 2484 |
| ErhI | CCWWGG | 3 cut(s) | 625, 1249, 1494 |
| Esp3I | CGTCTC | 2 cut(s) | 599, 2396 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3227, 3259 |
| FauI | CCCGC | 1 cut(s) | 1014 |
| FblI | GTMKAC | 4 cut(s) | 247, 384, 1853, 2290 |
| FokI | GGATG | 9 cut(s) | 55, 302, 716, 776, 814, 860, 1094, 1804, 2603 |
| FriOI | GRGCYC | 1 cut(s) | 2484 |
| FspBI | CTAG | 6 cut(s) | 299, 1250, 1319, 2165, 2273, 3270 |
| GlaI | GCGC | 3 cut(s) | 32, 42, 170 |
| GsaI | CCCAGC | 3 cut(s) | 325, 576, 3170 |
| GsuI | CTGGAG | 2 cut(s) | 272, 710 |
| HaeII | RGCGCY | 1 cut(s) | 172 |
| HaeIII | GGCC | 6 cut(s) | 623, 645, 1199, 1267, 1917, 2482 |
| HapII | CCGG | 8 cut(s) | 442, 538, 637, 843, 1707, 2040, 2125, 2393 |
| HgaI | GACGC | 3 cut(s) | 694, 1018, 2321 |
| HhaI | GCGC | 3 cut(s) | 33, 43, 171 |
| Hin1I | GRCGYC | 1 cut(s) | 2386 |
| Hin6I | GCGC | 3 cut(s) | 31, 41, 169 |
| HinP1I | GCGC | 3 cut(s) | 31, 41, 169 |
| HincII | GTYRAC | 1 cut(s) | 385 |
| HindII | GTYRAC | 1 cut(s) | 385 |
| HindIII | AAGCTT | 1 cut(s) | 1509 |
| HpaII | CCGG | 8 cut(s) | 442, 538, 637, 843, 1707, 2040, 2125, 2393 |
| Hpy99I | CGWCG | 2 cut(s) | 386, 688 |
| HpyAV | CCTTC | 6 cut(s) | 336, 673, 1253, 1605, 2094, 3033 |
| HpyCH4III | ACNGT | 8 cut(s) | 148, 245, 1040, 1774, 2122, 2191, 2624, 2917 |
| HpyCH4IV | ACGT | 6 cut(s) | 408, 552, 2386, 2583, 2948, 3183 |
| HpySE526I | ACGT | 6 cut(s) | 408, 552, 2386, 2583, 2948, 3183 |
| Hsp92I | GRCGYC | 1 cut(s) | 2386 |
| HspAI | GCGC | 3 cut(s) | 31, 41, 169 |
| Kpn2I | TCCGGA | 1 cut(s) | 2039 |
| KpnI | GGTACC | 1 cut(s) | 442 |
| Kzo9I | GATC | 9 cut(s) | 502, 615, 940, 1099, 1239, 1885, 2158, 3136, 3170 |
| LmnI | GCTCC | 6 cut(s) | 70, 300, 370, 1009, 1253, 1364 |
| Lsp1109I | GCAGC | 6 cut(s) | 28, 1353, 1825, 1883, 2191, 2245 |
| LweI | GCATC | 8 cut(s) | 448, 1459, 1525, 2573, 2604, 2678, 2789, 3042 |
| MaeI | CTAG | 6 cut(s) | 299, 1250, 1319, 2165, 2273, 3270 |
| MaeII | ACGT | 6 cut(s) | 408, 552, 2386, 2583, 2948, 3183 |
| MalI | GATC | 9 cut(s) | 504, 617, 942, 1101, 1241, 1887, 2160, 3138, 3172 |
| MbiI | CCGCTC | 1 cut(s) | 373 |
| MboI | GATC | 9 cut(s) | 502, 615, 940, 1099, 1239, 1885, 2158, 3136, 3170 |
| MfeI | CAATTG | 2 cut(s) | 1955, 2686 |
| MflI | RGATCY | 4 cut(s) | 940, 1239, 1885, 3170 |
| MhlI | GDGCHC | 4 cut(s) | 531, 1048, 1781, 2484 |
| MlsI | TGGCCA | 1 cut(s) | 1917 |
| MluNI | TGGCCA | 1 cut(s) | 1917 |
| MlyI | GAGTC | 2 cut(s) | 1285, 1361 |
| MmeI | TCCRAC | 4 cut(s) | 2001, 2568, 2653, 3045 |
| Mox20I | TGGCCA | 1 cut(s) | 1917 |
| Mph1103I | ATGCAT | 1 cut(s) | 2804 |
| MroI | TCCGGA | 1 cut(s) | 2039 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2361, 3243 |
| MscI | TGGCCA | 1 cut(s) | 1917 |
| MseI | TTAA | 7 cut(s) | 101, 1524, 1860, 2097, 2103, 3119, 3207 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1286, 2033, 2606, 2748, 3050 |
| Msp20I | TGGCCA | 1 cut(s) | 1917 |
| MspA1I | CMGCKG | 1 cut(s) | 1874 |
| MspI | CCGG | 8 cut(s) | 442, 538, 637, 843, 1707, 2040, 2125, 2393 |
| MspR9I | CCNGG | 5 cut(s) | 638, 844, 2393, 2859, 2970 |
| MunI | CAATTG | 2 cut(s) | 1955, 2686 |
| Mva1269I | GAATGC | 2 cut(s) | 2016, 3291 |
| MvaI | CCWGG | 2 cut(s) | 2859, 2970 |
| MvnI | CGCG | 5 cut(s) | 31, 41, 470, 1005, 1021 |
| NciI | CCSGG | 3 cut(s) | 638, 844, 2393 |
| NcoI | CCATGG | 2 cut(s) | 625, 1494 |
| NdeII | GATC | 9 cut(s) | 502, 615, 940, 1099, 1239, 1885, 2158, 3136, 3170 |
| NlaIV | GGNNCC | 7 cut(s) | 440, 942, 1241, 1360, 2082, 2482, 2734 |
| NmeAIII | GCCGAG | 1 cut(s) | 3110 |
| NmuCI | GTSAC | 5 cut(s) | 148, 1614, 2387, 2815, 2944 |
| NsiI | ATGCAT | 1 cut(s) | 2804 |
| NspI | RCATGY | 1 cut(s) | 1706 |
| NspV | TTCGAA | 1 cut(s) | 950 |
| OliI | CACNNNNGTG | 1 cut(s) | 2748 |
| PaeI | GCATGC | 1 cut(s) | 1706 |
| PagI | TCATGA | 2 cut(s) | 1164, 2028 |
| PctI | GAATGC | 2 cut(s) | 2016, 3291 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2361, 3243 |
| PfeI | GAWTC | 8 cut(s) | 282, 1161, 1378, 1490, 1644, 2229, 2994, 3199 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1195 |
| PinAI | ACCGGT | 1 cut(s) | 441 |
| PleI | GAGTC | 2 cut(s) | 1285, 1360 |
| PmaCI | CACGTG | 1 cut(s) | 2584 |
| PmlI | CACGTG | 1 cut(s) | 2584 |
| PpsI | GAGTC | 2 cut(s) | 1285, 1360 |
| Ppu21I | YACGTR | 2 cut(s) | 2584, 2949 |
| PshBI | ATTAAT | 1 cut(s) | 2103 |
| Psp1406I | AACGTT | 1 cut(s) | 3183 |
| Psp6I | CCWGG | 2 cut(s) | 2857, 2968 |
| PspCI | CACGTG | 1 cut(s) | 2584 |
| PspEI | GGTNACC | 1 cut(s) | 1614 |
| PspFI | CCCAGC | 3 cut(s) | 321, 572, 3166 |
| PspGI | CCWGG | 2 cut(s) | 2857, 2968 |
| PspN4I | GGNNCC | 7 cut(s) | 440, 942, 1241, 1360, 2082, 2482, 2734 |
| PspOMI | GGGCCC | 1 cut(s) | 2480 |
| PspPI | GGNCC | 7 cut(s) | 622, 644, 986, 1198, 2480, 2481, 2806 |
| PstI | CTGCAG | 1 cut(s) | 1371 |
| PsuI | RGATCY | 4 cut(s) | 940, 1239, 1885, 3170 |
| PvuII | CAGCTG | 1 cut(s) | 1874 |
| RsaI | GTAC | 7 cut(s) | 401, 440, 578, 674, 2559, 2914, 2951 |
| RsaNI | GTAC | 7 cut(s) | 400, 439, 577, 673, 2558, 2913, 2950 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1286, 2033, 2606, 2748, 3050 |
| SalI | GTCGAC | 1 cut(s) | 383 |
| SaqAI | TTAA | 7 cut(s) | 101, 1524, 1860, 2097, 2103, 3119, 3207 |
| Sau3AI | GATC | 9 cut(s) | 502, 615, 940, 1099, 1239, 1885, 2158, 3136, 3170 |
| Sau96I | GGNCC | 7 cut(s) | 622, 644, 986, 1198, 2480, 2481, 2806 |
| SchI | GAGTC | 2 cut(s) | 1285, 1361 |
| ScrFI | CCNGG | 5 cut(s) | 638, 844, 2393, 2859, 2970 |
| SduI | GDGCHC | 4 cut(s) | 531, 1048, 1781, 2484 |
| SfaNI | GCATC | 8 cut(s) | 448, 1459, 1525, 2573, 2604, 2678, 2789, 3042 |
| SfcI | CTRYAG | 4 cut(s) | 1367, 1889, 2067, 2786 |
| SfuI | TTCGAA | 1 cut(s) | 950 |
| SinI | GGWCC | 2 cut(s) | 986, 2806 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1286, 2033, 2606, 2748, 3050 |
| SmlI | CTYRAG | 2 cut(s) | 893, 1273 |
| SmoI | CTYRAG | 2 cut(s) | 893, 1273 |
| SphI | GCATGC | 1 cut(s) | 1706 |
| SspI | AATATT | 1 cut(s) | 2240 |
| SspMI | CTAG | 6 cut(s) | 299, 1250, 1319, 2165, 2273, 3270 |
| StyD4I | CCNGG | 5 cut(s) | 636, 842, 2391, 2857, 2968 |
| StyI | CCWWGG | 3 cut(s) | 625, 1249, 1494 |
| TaaI | ACNGT | 8 cut(s) | 148, 245, 1040, 1774, 2122, 2191, 2624, 2917 |
| TaiI | ACGT | 6 cut(s) | 411, 555, 2389, 2586, 2951, 3186 |
| TaqI | TCGA | 4 cut(s) | 384, 839, 950, 2605 |
| TaqII | GACCGA | 1 cut(s) | 617 |
| TatI | WGTACW | 1 cut(s) | 672 |
| TauI | GCSGC | 5 cut(s) | 376, 473, 614, 645, 698 |
| TfiI | GAWTC | 8 cut(s) | 282, 1161, 1378, 1490, 1644, 2229, 2994, 3199 |
| Tru1I | TTAA | 7 cut(s) | 101, 1524, 1860, 2097, 2103, 3119, 3207 |
| Tru9I | TTAA | 7 cut(s) | 101, 1524, 1860, 2097, 2103, 3119, 3207 |
| TscAI | CASTG | 8 cut(s) | 1200, 1376, 1424, 1779, 2194, 2343, 2709, 2871 |
| TseFI | GTSAC | 5 cut(s) | 148, 1614, 2387, 2815, 2944 |
| TseI | GCWGC | 6 cut(s) | 16, 1366, 1838, 1871, 2204, 2258 |
| Tsp45I | GTSAC | 5 cut(s) | 148, 1614, 2387, 2815, 2944 |
| TspRI | CASTG | 8 cut(s) | 1200, 1376, 1424, 1779, 2194, 2343, 2709, 2871 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1195 |
| VpaK11BI | GGWCC | 2 cut(s) | 986, 2806 |
| VspI | ATTAAT | 1 cut(s) | 2103 |
| XapI | RAATTY | 8 cut(s) | 477, 1114, 1177, 1755, 1975, 2024, 2852, 3239 |
| XceI | RCATGY | 1 cut(s) | 1706 |
| XmaJI | CCTAGG | 1 cut(s) | 1249 |
| XmiI | GTMKAC | 4 cut(s) | 247, 384, 1853, 2290 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2361, 3243 |
| XspI | CTAG | 6 cut(s) | 299, 1250, 1319, 2165, 2273, 3270 |
| ZraI | GACGTC | 1 cut(s) | 2387 |
| Zsp2I | ATGCAT | 1 cut(s) | 2804 |