DNA mismatch repair
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25540 |
| fragaria_vesca | FvH4_7g29360 |
| malus_domestica | MD07G1267600.v1.1 |
| prunus_persica | Prupe.2G293300_v2.0.a1 Prupe.6G163500_v2.0.a1 |
| pyrus_communis | pycom01g20970 pycom07g24520 |
| rosa_chinensis | RchiOBHm_Chr1g0377121 |
| rosa_laevigata | RLG00000026541 |
| rosa_multiflora | Rmu_ssc0000155.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00281430 |
| rosa_rugosa | Rorug01G0401600 |
| rosa_samantha | Rh1AG419000 Rh1BG378100 Rh1CG392100 Rh1DG408800 |
| rosa_wichuraiana | Rw1G036750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2380 |
| Acc36I | ACCTGC | 3 cut(s) | 358, 988, 3321 |
| AccB1I | GGYRCC | 2 cut(s) | 2071, 2723 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1186 |
| AccBSI | CCGCTC | 1 cut(s) | 364 |
| AccI | GTMKAC | 3 cut(s) | 375, 1844, 2281 |
| AccII | CGCG | 5 cut(s) | 31, 41, 461, 996, 1012 |
| AclI | AACGTT | 1 cut(s) | 3174 |
| AclWI | GGATC | 5 cut(s) | 501, 926, 939, 1225, 1238 |
| AcoI | YGGCCR | 1 cut(s) | 1906 |
| AcsI | RAATTY | 8 cut(s) | 272, 468, 1105, 1168, 1966, 2015, 2843, 3230 |
| AcuI | CTGAAG | 4 cut(s) | 1065, 1566, 1694, 2871 |
| AcyI | GRCGYC | 1 cut(s) | 2377 |
| AfaI | GTAC | 6 cut(s) | 392, 431, 540, 665, 2550, 2905 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 528, 1186, 2480 |
| AflIII | ACRYGT | 1 cut(s) | 541 |
| AgeI | ACCGGT | 1 cut(s) | 432 |
| AjiI | CACGTC | 1 cut(s) | 544 |
| AjnI | CCWGG | 1 cut(s) | 2959 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 789, 821, 2812, 2844 |
| AleI | CACNNNNGTG | 1 cut(s) | 2739 |
| Alw21I | GWGCWC | 1 cut(s) | 1772 |
| Alw26I | GTCTC | 6 cut(s) | 590, 912, 1012, 1544, 2387, 2857 |
| AlwI | GGATC | 5 cut(s) | 501, 926, 939, 1225, 1238 |
| AoxI | GGCC | 6 cut(s) | 612, 634, 1188, 1256, 1906, 2471 |
| ApaI | GGGCCC | 1 cut(s) | 2475 |
| ApeKI | GCWGC | 7 cut(s) | 16, 1357, 1829, 1862, 2195, 2249, 2569 |
| ApoI | RAATTY | 8 cut(s) | 272, 468, 1105, 1168, 1966, 2015, 2843, 3230 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1826, 1858, 2097, 2129 |
| AseI | ATTAAT | 1 cut(s) | 2094 |
| AsiGI | ACCGGT | 1 cut(s) | 432 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2352, 3234 |
| AspA2I | CCTAGG | 1 cut(s) | 1240 |
| AspLEI | GCGC | 4 cut(s) | 33, 43, 162, 996 |
| AspS9I | GGNCC | 7 cut(s) | 613, 635, 977, 1189, 2471, 2472, 2797 |
| AsuC2I | CCSGG | 2 cut(s) | 629, 2384 |
| AsuII | TTCGAA | 1 cut(s) | 941 |
| AvaII | GGWCC | 2 cut(s) | 977, 2797 |
| AvrII | CCTAGG | 1 cut(s) | 1240 |
| AxyI | CCTNAGG | 1 cut(s) | 1917 |
| BaeGI | GKGCMC | 2 cut(s) | 522, 2475 |
| BalI | TGGCCA | 1 cut(s) | 1908 |
| BamHI | GGATCC | 2 cut(s) | 931, 1230 |
| BanI | GGYRCC | 2 cut(s) | 2071, 2723 |
| BanII | GRGCYC | 1 cut(s) | 2475 |
| Bbv12I | GWGCWC | 1 cut(s) | 1772 |
| BbvI | GCAGC | 7 cut(s) | 28, 1344, 1816, 1874, 2182, 2236, 2556 |
| BceAI | ACGGC | 2 cut(s) | 525, 615 |
| BciT130I | CCWGG | 1 cut(s) | 2961 |
| BciVI | GTATCC | 1 cut(s) | 2627 |
| BclI | TGATCA | 1 cut(s) | 1090 |
| BcnI | CCSGG | 2 cut(s) | 629, 2384 |
| BcoDI | GTCTC | 6 cut(s) | 590, 912, 1012, 1544, 2387, 2857 |
| BfaI | CTAG | 6 cut(s) | 290, 1241, 1310, 2156, 2264, 3261 |
| BfmI | CTRYAG | 3 cut(s) | 1358, 2058, 2777 |
| BfoI | RGCGCY | 1 cut(s) | 163 |
| BfuAI | ACCTGC | 3 cut(s) | 358, 988, 3321 |
| BfuI | GTATCC | 1 cut(s) | 2627 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 620 |
| BglII | AGATCT | 1 cut(s) | 3161 |
| BlnI | CCTAGG | 1 cut(s) | 1240 |
| BlpI | GCTNAGC | 1 cut(s) | 3006 |
| Bme1390I | CCNGG | 3 cut(s) | 629, 2384, 2961 |
| Bme18I | GGWCC | 2 cut(s) | 977, 2797 |
| BmgBI | CACGTC | 1 cut(s) | 544 |
| BmgT120I | GGNCC | 7 cut(s) | 613, 635, 977, 1189, 2471, 2472, 2797 |
| BmiI | GGNNCC | 6 cut(s) | 933, 1232, 1351, 2073, 2473, 2725 |
| BmrFI | CCNGG | 3 cut(s) | 629, 2384, 2961 |
| BmrI | ACTGGG | 3 cut(s) | 843, 1420, 2843 |
| BmsI | GCATC | 9 cut(s) | 439, 1450, 1516, 2564, 2595, 2615, 2669, 2780, 3033 |
| BmuI | ACTGGG | 3 cut(s) | 843, 1420, 2843 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 892, 924, 992, 1024, 1334, 1366 |
| BpmI | CTGGAG | 2 cut(s) | 263, 701 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3006 |
| Bpu14I | TTCGAA | 1 cut(s) | 941 |
| BpuEI | CTTGAG | 1 cut(s) | 905 |
| BpuMI | CCSGG | 2 cut(s) | 629, 2384 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2363 |
| BsaHI | GRCGYC | 1 cut(s) | 2377 |
| BsaJI | CCNNGG | 4 cut(s) | 616, 628, 1240, 1485 |
| BsaWI | WCCGGW | 2 cut(s) | 432, 2115 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 137, 167, 701, 731, 1639, 1669, 2655, 2685 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 528, 1186, 2480 |
| Bse118I | RCCGGY | 1 cut(s) | 432 |
| Bse1I | ACTGG | 8 cut(s) | 838, 1191, 1415, 1812, 2268, 2327, 2700, 2849 |
| Bse21I | CCTNAGG | 1 cut(s) | 1917 |
| Bse3DI | GCAATG | 4 cut(s) | 1336, 1668, 2517, 3309 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2363 |
| BseBI | CCWGG | 1 cut(s) | 2961 |
| BseDI | CCNNGG | 4 cut(s) | 616, 628, 1240, 1485 |
| BseGI | GGATG | 9 cut(s) | 68, 306, 700, 760, 798, 844, 1078, 1808, 2587 |
| BseJI | GATNNNNATC | 1 cut(s) | 2363 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 528, 1186, 2480 |
| BseMI | GCAATG | 4 cut(s) | 1336, 1668, 2517, 3309 |
| BseNI | ACTGG | 8 cut(s) | 838, 1191, 1415, 1812, 2268, 2327, 2700, 2849 |
| BseRI | GAGGAG | 4 cut(s) | 160, 725, 889, 2989 |
| BseSI | GKGCMC | 2 cut(s) | 522, 2475 |
| BseXI | GCAGC | 7 cut(s) | 28, 1344, 1816, 1874, 2182, 2236, 2556 |
| BseYI | CCCAGC | 1 cut(s) | 563 |
| Bsh1236I | CGCG | 5 cut(s) | 31, 41, 461, 996, 1012 |
| BshFI | GGCC | 6 cut(s) | 614, 636, 1190, 1258, 1908, 2473 |
| BshNI | GGYRCC | 2 cut(s) | 2071, 2723 |
| BshTI | ACCGGT | 1 cut(s) | 432 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1772 |
| BsiSI | CCGG | 6 cut(s) | 433, 529, 628, 1698, 2116, 2384 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 528, 1186, 2480 |
| BsmAI | GTCTC | 6 cut(s) | 590, 912, 1012, 1544, 2387, 2857 |
| BsmBI | CGTCTC | 2 cut(s) | 590, 2387 |
| BsmI | GAATGC | 2 cut(s) | 2007, 3282 |
| BsnI | GGCC | 6 cut(s) | 614, 636, 1190, 1258, 1908, 2473 |
| Bsp119I | TTCGAA | 1 cut(s) | 941 |
| Bsp120I | GGGCCC | 1 cut(s) | 2471 |
| Bsp1286I | GDGCHC | 3 cut(s) | 522, 1772, 2475 |
| Bsp1407I | TGTACA | 2 cut(s) | 538, 663 |
| Bsp143I | GATC | 7 cut(s) | 493, 606, 931, 1090, 1230, 2149, 3161 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3006 |
| Bsp19I | CCATGG | 2 cut(s) | 616, 1485 |
| BspANI | GGCC | 6 cut(s) | 614, 636, 1190, 1258, 1908, 2473 |
| BspFNI | CGCG | 5 cut(s) | 31, 41, 461, 996, 1012 |
| BspHI | TCATGA | 2 cut(s) | 1155, 2019 |
| BspLI | GGNNCC | 6 cut(s) | 933, 1232, 1351, 2073, 2473, 2725 |
| BspMAI | CTGCAG | 1 cut(s) | 1362 |
| BspMI | ACCTGC | 3 cut(s) | 358, 988, 3321 |
| BspPI | GGATC | 5 cut(s) | 501, 926, 939, 1225, 1238 |
| BspT104I | TTCGAA | 1 cut(s) | 941 |
| BspT107I | GGYRCC | 2 cut(s) | 2071, 2723 |
| BsrBI | CCGCTC | 1 cut(s) | 364 |
| BsrDI | GCAATG | 4 cut(s) | 1336, 1668, 2517, 3309 |
| BsrFI | RCCGGY | 1 cut(s) | 432 |
| BsrGI | TGTACA | 2 cut(s) | 538, 663 |
| BsrI | ACTGG | 8 cut(s) | 838, 1191, 1415, 1812, 2268, 2327, 2700, 2849 |
| BssAI | RCCGGY | 1 cut(s) | 432 |
| BssECI | CCNNGG | 4 cut(s) | 616, 628, 1240, 1485 |
| BssMI | GATC | 7 cut(s) | 493, 606, 931, 1090, 1230, 2149, 3161 |
| BssNI | GRCGYC | 1 cut(s) | 2377 |
| BssT1I | CCWWGG | 3 cut(s) | 616, 1240, 1485 |
| Bst2UI | CCWGG | 1 cut(s) | 2961 |
| Bst4CI | ACNGT | 7 cut(s) | 139, 357, 1765, 2113, 2182, 2615, 2908 |
| Bst6I | CTCTTC | 3 cut(s) | 79, 190, 1725 |
| BstACI | GRCGYC | 1 cut(s) | 2377 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3002 |
| BstAUI | TGTACA | 2 cut(s) | 538, 663 |
| BstBI | TTCGAA | 1 cut(s) | 941 |
| BstC8I | GCNNGC | 2 cut(s) | 2689, 3003 |
| BstDSI | CCRYGG | 2 cut(s) | 616, 1485 |
| BstEII | GGTNACC | 1 cut(s) | 1605 |
| BstF5I | GGATG | 9 cut(s) | 68, 306, 700, 760, 798, 844, 1078, 1808, 2587 |
| BstFNI | CGCG | 5 cut(s) | 31, 41, 461, 996, 1012 |
| BstH2I | RGCGCY | 1 cut(s) | 163 |
| BstHHI | GCGC | 4 cut(s) | 33, 43, 162, 996 |
| BstKTI | GATC | 7 cut(s) | 496, 609, 934, 1093, 1233, 2152, 3164 |
| BstMAI | GTCTC | 6 cut(s) | 590, 912, 1012, 1544, 2387, 2857 |
| BstMBI | GATC | 7 cut(s) | 493, 606, 931, 1090, 1230, 2149, 3161 |
| BstNI | CCWGG | 1 cut(s) | 2961 |
| BstNSI | RCATGY | 1 cut(s) | 2576 |
| BstPI | GGTNACC | 1 cut(s) | 1605 |
| BstSCI | CCNGG | 3 cut(s) | 627, 2382, 2959 |
| BstSFI | CTRYAG | 3 cut(s) | 1358, 2058, 2777 |
| BstSLI | GKGCMC | 2 cut(s) | 522, 2475 |
| BstUI | CGCG | 5 cut(s) | 31, 41, 461, 996, 1012 |
| BstV1I | GCAGC | 7 cut(s) | 28, 1344, 1816, 1874, 2182, 2236, 2556 |
| BstX2I | RGATCY | 3 cut(s) | 931, 1230, 3161 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3043 |
| BstYI | RGATCY | 3 cut(s) | 931, 1230, 3161 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1917 |
| BsuI | GTATCC | 1 cut(s) | 2627 |
| BsuRI | GGCC | 6 cut(s) | 614, 636, 1190, 1258, 1908, 2473 |
| BtgI | CCRYGG | 2 cut(s) | 616, 1485 |
| BtrI | CACGTC | 1 cut(s) | 544 |
| BtsCI | GGATG | 9 cut(s) | 68, 306, 700, 760, 798, 844, 1078, 1808, 2587 |
| BtsI | GCAGTG | 1 cut(s) | 1367 |
| BveI | ACCTGC | 3 cut(s) | 358, 988, 3321 |
| Cac8I | GCNNGC | 2 cut(s) | 2689, 3003 |
| CciI | TCATGA | 2 cut(s) | 1155, 2019 |
| CfoI | GCGC | 4 cut(s) | 33, 43, 162, 996 |
| Cfr10I | RCCGGY | 1 cut(s) | 432 |
| Cfr13I | GGNCC | 7 cut(s) | 613, 635, 977, 1189, 2471, 2472, 2797 |
| CseI | GACGC | 1 cut(s) | 685 |
| Csp6I | GTAC | 6 cut(s) | 391, 430, 539, 664, 2549, 2904 |
| CspAI | ACCGGT | 1 cut(s) | 432 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2464, 2499, 3160, 3195 |
| CviQI | GTAC | 6 cut(s) | 391, 430, 539, 664, 2549, 2904 |
| DpnI | GATC | 7 cut(s) | 495, 608, 933, 1092, 1232, 2151, 3163 |
| DpnII | GATC | 7 cut(s) | 493, 606, 931, 1090, 1230, 2149, 3161 |
| EaeI | YGGCCR | 1 cut(s) | 1906 |
| Eam1104I | CTCTTC | 3 cut(s) | 79, 190, 1725 |
| EarI | CTCTTC | 3 cut(s) | 79, 190, 1725 |
| EciI | GGCGGA | 1 cut(s) | 704 |
| Eco130I | CCWWGG | 3 cut(s) | 616, 1240, 1485 |
| Eco24I | GRGCYC | 1 cut(s) | 2475 |
| Eco47I | GGWCC | 2 cut(s) | 977, 2797 |
| Eco57I | CTGAAG | 4 cut(s) | 1065, 1566, 1694, 2871 |
| Eco81I | CCTNAGG | 1 cut(s) | 1917 |
| Eco91I | GGTNACC | 1 cut(s) | 1605 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2471 |
| EcoO65I | GGTNACC | 1 cut(s) | 1605 |
| EcoRI | GAATTC | 4 cut(s) | 1966, 2015, 2843, 3230 |
| EcoRII | CCWGG | 1 cut(s) | 2959 |
| EcoT14I | CCWWGG | 3 cut(s) | 616, 1240, 1485 |
| EcoT22I | ATGCAT | 1 cut(s) | 2795 |
| EcoT38I | GRGCYC | 1 cut(s) | 2475 |
| ErhI | CCWWGG | 3 cut(s) | 616, 1240, 1485 |
| Esp3I | CGTCTC | 2 cut(s) | 590, 2387 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3218, 3250 |
| FauI | CCCGC | 2 cut(s) | 250, 1005 |
| FbaI | TGATCA | 1 cut(s) | 1090 |
| FblI | GTMKAC | 3 cut(s) | 375, 1844, 2281 |
| FokI | GGATG | 9 cut(s) | 55, 293, 707, 767, 805, 851, 1085, 1795, 2594 |
| FriOI | GRGCYC | 1 cut(s) | 2475 |
| FspBI | CTAG | 6 cut(s) | 290, 1241, 1310, 2156, 2264, 3261 |
| GlaI | GCGC | 4 cut(s) | 32, 42, 161, 995 |
| GsaI | CCCAGC | 1 cut(s) | 567 |
| GsuI | CTGGAG | 2 cut(s) | 263, 701 |
| HaeII | RGCGCY | 1 cut(s) | 163 |
| HaeIII | GGCC | 6 cut(s) | 614, 636, 1190, 1258, 1908, 2473 |
| HapII | CCGG | 6 cut(s) | 433, 529, 628, 1698, 2116, 2384 |
| HgaI | GACGC | 1 cut(s) | 685 |
| HhaI | GCGC | 4 cut(s) | 33, 43, 162, 996 |
| Hin1I | GRCGYC | 1 cut(s) | 2377 |
| Hin6I | GCGC | 4 cut(s) | 31, 41, 160, 994 |
| HinP1I | GCGC | 4 cut(s) | 31, 41, 160, 994 |
| HincII | GTYRAC | 1 cut(s) | 376 |
| HindII | GTYRAC | 1 cut(s) | 376 |
| HindIII | AAGCTT | 1 cut(s) | 1500 |
| HinfI | GANTC | 9 cut(s) | 1152, 1282, 1343, 1369, 1481, 1635, 2220, 2985, 3190 |
| HpaII | CCGG | 6 cut(s) | 433, 529, 628, 1698, 2116, 2384 |
| Hpy166II | GTNNAC | 7 cut(s) | 376, 541, 666, 1845, 2282, 2911, 3182 |
| Hpy8I | GTNNAC | 7 cut(s) | 376, 541, 666, 1845, 2282, 2911, 3182 |
| Hpy99I | CGWCG | 2 cut(s) | 377, 679 |
| HpyAV | CCTTC | 6 cut(s) | 327, 664, 1244, 1596, 2085, 3024 |
| HpyCH4III | ACNGT | 7 cut(s) | 139, 357, 1765, 2113, 2182, 2615, 2908 |
| HpyCH4IV | ACGT | 3 cut(s) | 543, 2377, 3174 |
| HpySE526I | ACGT | 3 cut(s) | 543, 2377, 3174 |
| Hsp92I | GRCGYC | 1 cut(s) | 2377 |
| HspAI | GCGC | 4 cut(s) | 31, 41, 160, 994 |
| Ksp22I | TGATCA | 1 cut(s) | 1090 |
| Kzo9I | GATC | 7 cut(s) | 493, 606, 931, 1090, 1230, 2149, 3161 |
| LmnI | GCTCC | 5 cut(s) | 291, 361, 1000, 1244, 1355 |
| Lsp1109I | GCAGC | 7 cut(s) | 28, 1344, 1816, 1874, 2182, 2236, 2556 |
| LweI | GCATC | 9 cut(s) | 439, 1450, 1516, 2564, 2595, 2615, 2669, 2780, 3033 |
| MaeI | CTAG | 6 cut(s) | 290, 1241, 1310, 2156, 2264, 3261 |
| MaeII | ACGT | 3 cut(s) | 543, 2377, 3174 |
| MalI | GATC | 7 cut(s) | 495, 608, 933, 1092, 1232, 2151, 3163 |
| MbiI | CCGCTC | 1 cut(s) | 364 |
| MboI | GATC | 7 cut(s) | 493, 606, 931, 1090, 1230, 2149, 3161 |
| MfeI | CAATTG | 2 cut(s) | 1946, 2677 |
| MflI | RGATCY | 3 cut(s) | 931, 1230, 3161 |
| MhlI | GDGCHC | 3 cut(s) | 522, 1772, 2475 |
| MlsI | TGGCCA | 1 cut(s) | 1908 |
| MluNI | TGGCCA | 1 cut(s) | 1908 |
| MlyI | GAGTC | 2 cut(s) | 1276, 1352 |
| MmeI | TCCRAC | 5 cut(s) | 339, 1992, 2559, 2644, 3036 |
| Mox20I | TGGCCA | 1 cut(s) | 1908 |
| Mph1103I | ATGCAT | 1 cut(s) | 2795 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2352, 3234 |
| MscI | TGGCCA | 1 cut(s) | 1908 |
| MseI | TTAA | 5 cut(s) | 1515, 1851, 2088, 2094, 3198 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1277, 2024, 2597, 2739, 3041 |
| Msp20I | TGGCCA | 1 cut(s) | 1908 |
| MspA1I | CMGCKG | 1 cut(s) | 1865 |
| MspI | CCGG | 6 cut(s) | 433, 529, 628, 1698, 2116, 2384 |
| MspR9I | CCNGG | 3 cut(s) | 629, 2384, 2961 |
| MunI | CAATTG | 2 cut(s) | 1946, 2677 |
| Mva1269I | GAATGC | 2 cut(s) | 2007, 3282 |
| MvaI | CCWGG | 1 cut(s) | 2961 |
| MvnI | CGCG | 5 cut(s) | 31, 41, 461, 996, 1012 |
| NciI | CCSGG | 2 cut(s) | 629, 2384 |
| NcoI | CCATGG | 2 cut(s) | 616, 1485 |
| NdeII | GATC | 7 cut(s) | 493, 606, 931, 1090, 1230, 2149, 3161 |
| NlaIV | GGNNCC | 6 cut(s) | 933, 1232, 1351, 2073, 2473, 2725 |
| NmeAIII | GCCGAG | 2 cut(s) | 2263, 3101 |
| NmuCI | GTSAC | 5 cut(s) | 139, 1605, 2378, 2806, 2935 |
| NsiI | ATGCAT | 1 cut(s) | 2795 |
| NspI | RCATGY | 1 cut(s) | 2576 |
| NspV | TTCGAA | 1 cut(s) | 941 |
| OliI | CACNNNNGTG | 1 cut(s) | 2739 |
| PagI | TCATGA | 2 cut(s) | 1155, 2019 |
| PctI | GAATGC | 2 cut(s) | 2007, 3282 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2352, 3234 |
| PfeI | GAWTC | 7 cut(s) | 1152, 1369, 1481, 1635, 2220, 2985, 3190 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1186 |
| PinAI | ACCGGT | 1 cut(s) | 432 |
| PleI | GAGTC | 2 cut(s) | 1276, 1351 |
| PpsI | GAGTC | 2 cut(s) | 1276, 1351 |
| PshBI | ATTAAT | 1 cut(s) | 2094 |
| Psp1406I | AACGTT | 1 cut(s) | 3174 |
| Psp6I | CCWGG | 1 cut(s) | 2959 |
| PspEI | GGTNACC | 1 cut(s) | 1605 |
| PspFI | CCCAGC | 1 cut(s) | 563 |
| PspGI | CCWGG | 1 cut(s) | 2959 |
| PspN4I | GGNNCC | 6 cut(s) | 933, 1232, 1351, 2073, 2473, 2725 |
| PspOMI | GGGCCC | 1 cut(s) | 2471 |
| PspPI | GGNCC | 7 cut(s) | 613, 635, 977, 1189, 2471, 2472, 2797 |
| PstI | CTGCAG | 1 cut(s) | 1362 |
| PsuI | RGATCY | 3 cut(s) | 931, 1230, 3161 |
| PvuII | CAGCTG | 1 cut(s) | 1865 |
| RsaI | GTAC | 6 cut(s) | 392, 431, 540, 665, 2550, 2905 |
| RsaNI | GTAC | 6 cut(s) | 391, 430, 539, 664, 2549, 2904 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1277, 2024, 2597, 2739, 3041 |
| SalI | GTCGAC | 1 cut(s) | 374 |
| SaqAI | TTAA | 5 cut(s) | 1515, 1851, 2088, 2094, 3198 |
| Sau3AI | GATC | 7 cut(s) | 493, 606, 931, 1090, 1230, 2149, 3161 |
| Sau96I | GGNCC | 7 cut(s) | 613, 635, 977, 1189, 2471, 2472, 2797 |
| SchI | GAGTC | 2 cut(s) | 1276, 1352 |
| ScrFI | CCNGG | 3 cut(s) | 629, 2384, 2961 |
| SduI | GDGCHC | 3 cut(s) | 522, 1772, 2475 |
| SfaNI | GCATC | 9 cut(s) | 439, 1450, 1516, 2564, 2595, 2615, 2669, 2780, 3033 |
| SfcI | CTRYAG | 3 cut(s) | 1358, 2058, 2777 |
| SfuI | TTCGAA | 1 cut(s) | 941 |
| SinI | GGWCC | 2 cut(s) | 977, 2797 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1277, 2024, 2597, 2739, 3041 |
| SmlI | CTYRAG | 1 cut(s) | 884 |
| SmoI | CTYRAG | 1 cut(s) | 884 |
| SspI | AATATT | 1 cut(s) | 2231 |
| SspMI | CTAG | 6 cut(s) | 290, 1241, 1310, 2156, 2264, 3261 |
| StyD4I | CCNGG | 3 cut(s) | 627, 2382, 2959 |
| StyI | CCWWGG | 3 cut(s) | 616, 1240, 1485 |
| TaaI | ACNGT | 7 cut(s) | 139, 357, 1765, 2113, 2182, 2615, 2908 |
| TaiI | ACGT | 3 cut(s) | 546, 2380, 3177 |
| TaqI | TCGA | 4 cut(s) | 375, 830, 941, 2596 |
| TaqII | GACCGA | 1 cut(s) | 608 |
| TatI | WGTACW | 2 cut(s) | 538, 663 |
| TauI | GCSGC | 5 cut(s) | 165, 367, 464, 605, 689 |
| TfiI | GAWTC | 7 cut(s) | 1152, 1369, 1481, 1635, 2220, 2985, 3190 |
| Tru1I | TTAA | 5 cut(s) | 1515, 1851, 2088, 2094, 3198 |
| Tru9I | TTAA | 5 cut(s) | 1515, 1851, 2088, 2094, 3198 |
| TseFI | GTSAC | 5 cut(s) | 139, 1605, 2378, 2806, 2935 |
| TseI | GCWGC | 7 cut(s) | 16, 1357, 1829, 1862, 2195, 2249, 2569 |
| Tsp45I | GTSAC | 5 cut(s) | 139, 1605, 2378, 2806, 2935 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1186 |
| VpaK11BI | GGWCC | 2 cut(s) | 977, 2797 |
| VspI | ATTAAT | 1 cut(s) | 2094 |
| XapI | RAATTY | 8 cut(s) | 272, 468, 1105, 1168, 1966, 2015, 2843, 3230 |
| XceI | RCATGY | 1 cut(s) | 2576 |
| XmaJI | CCTAGG | 1 cut(s) | 1240 |
| XmiI | GTMKAC | 3 cut(s) | 375, 1844, 2281 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2352, 3234 |
| XspI | CTAG | 6 cut(s) | 290, 1241, 1310, 2156, 2264, 3261 |
| ZraI | GACGTC | 1 cut(s) | 2378 |
| Zsp2I | ATGCAT | 1 cut(s) | 2795 |