Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0013970

Physical Location & Seq

Genomic Coordinates Forward (+)

17501424 .. 17504197

Gene Structure 2774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G169700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 591 bp

ATGGACTGTCTTCAGAATCCAAACCCTAGCTCTGCCGGCCCTTATCACTTTGGAGAGAGCATCGATCCTTCCATGGATTTTGATGAGTTTTCAGACTATTTCATGCTTGATTATGATGTTGATGATCATCAAGATTCTTCGTCTTTAAGCACCGTGTCGCCGGAGAAGTTCATGGCTGACCGCTCTACTGGATCCAGTGGTGGTGCAACATCAAGAAATAGCAACAATAATATGAAATGCAGAAATGAGGGGAGGAGAAACAAGATAGAAATGGGTCATAGGGTTGCTTTCAGAACTAAATCGGAGCTGGAGGTTATGGATGATGGATTCAAGTGGAGGAAGTACGGAAAGAAGTCAGTCAAGAACAGCCCAAATCCAAGAAATTACTACAAATGTTCAAGTGGAGGGTGCAATGTAAAGAAGAGGGTGGAGAGGGACCGAGAAGACTCGAGCTATGTGATAACCACATACGATGGAGTGCACAATCATGAGAGCCCTTGTGTGGTATATTACAACCAGATGCCTCCTCCTGTGGATCCCAACAACATTTGGACTTTGCGAGCTTCTTCACAGTCTTCGGCTTCCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0042221 GO:0042742 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0080090 GO:0098542 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

197

Amino Acids

22.18

Weight (kDa)

6.21

Isoelectric Point (pI)

60.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013970)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64810
fragaria_vesca	FvH4_1g22820 FvH4_1g22820 FvH4_1g22820
malus_domestica	MD15G1331300.v1.1
prunus_persica	Prupe.6G169700_v2.0.a1
pyrus_communis	pycom15g29370
rosa_chinensis	RchiOBHm_Chr2g0117181
rosa_laevigata	RLG00000018333
rosa_multiflora	Rmu_sc0004602.1_g000048
rosa_roxburghii	Rroxscaffold_2G00126680
rosa_rugosa	Rorug02G0210700
rosa_samantha	Rh2AG266700 Rh2BG278900 Rh2DG273700 Rh2DG292900
rosa_wichuraiana	Rw2G021040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	183
AciI	CCGC	1 cut(s)	181
AclWI	GGATC	5 cut(s)	59, 186, 199, 530, 543
AfaI	GTAC	1 cut(s)	344
AfiI	CCNNNNNNNGG	1 cut(s)	502
AgsI	TTSAA	2 cut(s)	331, 399
AluBI	AGCT	4 cut(s)	30, 307, 453, 563
AluI	AGCT	4 cut(s)	30, 307, 453, 563
Alw21I	GWGCWC	1 cut(s)	483
Alw44I	GTGCAC	1 cut(s)	479
AlwI	GGATC	5 cut(s)	59, 186, 199, 530, 543
Ama87I	CYCGRG	1 cut(s)	448
AoxI	GGCC	1 cut(s)	37
ApaLI	GTGCAC	1 cut(s)	479
AspS9I	GGNCC	2 cut(s)	38, 436
AvaI	CYCGRG	1 cut(s)	448
AvaII	GGWCC	1 cut(s)	436
BaeGI	GKGCMC	1 cut(s)	483
BamHI	GGATCC	2 cut(s)	191, 535
BanII	GRGCYC	1 cut(s)	497
BbsI	GAAGAC	3 cut(s)	2, 450, 567
Bbv12I	GWGCWC	1 cut(s)	483
BccI	CCATC	2 cut(s)	317, 467
BclI	TGATCA	1 cut(s)	124
BfaI	CTAG	1 cut(s)	27
Bme18I	GGWCC	1 cut(s)	436
BmeT110I	CYCGRG	1 cut(s)	448
BmgT120I	GGNCC	2 cut(s)	38, 436
BmiI	GGNNCC	3 cut(s)	193, 437, 537
BmsI	GCATC	2 cut(s)	69, 510
BpiI	GAAGAC	3 cut(s)	2, 450, 567
BpmI	CTGGAG	1 cut(s)	329
Bsa29I	ATCGAT	1 cut(s)	63
BsaBI	GATNNNNATC	1 cut(s)	126
BsaJI	CCNNGG	1 cut(s)	72
Bsc4I	CCNNNNNNNGG	1 cut(s)	502
Bse118I	RCCGGY	1 cut(s)	35
Bse1I	ACTGG	2 cut(s)	193, 195
Bse3DI	GCAATG	1 cut(s)	418
Bse8I	GATNNNNATC	1 cut(s)	126
BseCI	ATCGAT	1 cut(s)	63
BseDI	CCNNGG	1 cut(s)	72
BseGI	GGATG	1 cut(s)	325
BseJI	GATNNNNATC	1 cut(s)	126
BseLI	CCNNNNNNNGG	1 cut(s)	502
BseMI	GCAATG	1 cut(s)	418
BseNI	ACTGG	2 cut(s)	193, 195
BseRI	GAGGAG	2 cut(s)	268, 516
BseSI	GKGCMC	1 cut(s)	483
BshFI	GGCC	1 cut(s)	39
BshVI	ATCGAT	1 cut(s)	63
BsiHKAI	GWGCWC	1 cut(s)	483
BsiHKCI	CYCGRG	1 cut(s)	448
BsiSI	CCGG	2 cut(s)	36, 161
BslFI	GGGAC	1 cut(s)	449
BslI	CCNNNNNNNGG	1 cut(s)	502
BsmFI	GGGAC	1 cut(s)	449
BsnI	GGCC	1 cut(s)	39
BsoBI	CYCGRG	1 cut(s)	448
Bsp1286I	GDGCHC	2 cut(s)	483, 497
Bsp143I	GATC	4 cut(s)	64, 124, 191, 535
Bsp19I	CCATGG	1 cut(s)	72
BspACI	CCGC	1 cut(s)	181
BspANI	GGCC	1 cut(s)	39
BspDI	ATCGAT	1 cut(s)	63
BspHI	TCATGA	1 cut(s)	487
BspLI	GGNNCC	3 cut(s)	193, 437, 537
BspPI	GGATC	5 cut(s)	59, 186, 199, 530, 543
BsrBI	CCGCTC	1 cut(s)	183
BsrDI	GCAATG	1 cut(s)	418
BsrFI	RCCGGY	1 cut(s)	35
BsrI	ACTGG	2 cut(s)	193, 195
BssAI	RCCGGY	1 cut(s)	35
BssECI	CCNNGG	1 cut(s)	72
BssMI	GATC	4 cut(s)	64, 124, 191, 535
BssT1I	CCWWGG	1 cut(s)	72
Bst4CI	ACNGT	3 cut(s)	8, 154, 573
Bst6I	CTCTTC	1 cut(s)	416
BstC8I	GCNNGC	2 cut(s)	37, 561
BstDSI	CCRYGG	1 cut(s)	72
BstF5I	GGATG	1 cut(s)	325
BstKTI	GATC	4 cut(s)	67, 127, 194, 538
BstMBI	GATC	4 cut(s)	64, 124, 191, 535
BstMWI	GCNNNNNNNGC	1 cut(s)	36
BstSLI	GKGCMC	1 cut(s)	483
BstV2I	GAAGAC	3 cut(s)	2, 450, 567
BstX2I	RGATCY	2 cut(s)	191, 535
BstYI	RGATCY	2 cut(s)	191, 535
Bsu15I	ATCGAT	1 cut(s)	63
BsuRI	GGCC	1 cut(s)	39
BsuTUI	ATCGAT	1 cut(s)	63
BtgI	CCRYGG	1 cut(s)	72
BtsCI	GGATG	1 cut(s)	325
BtsIMutI	CAGTG	1 cut(s)	202
Cac8I	GCNNGC	2 cut(s)	37, 561
CciI	TCATGA	1 cut(s)	487
Cfr10I	RCCGGY	1 cut(s)	35
Cfr13I	GGNCC	2 cut(s)	38, 436
ClaI	ATCGAT	1 cut(s)	63
Csp6I	GTAC	1 cut(s)	343
CviAII	CATG	4 cut(s)	73, 103, 172, 488
CviJI	RGCY	9 cut(s)	30, 39, 176, 307, 369, 453, 495, 563, 581
CviKI_1	RGCY	9 cut(s)	30, 39, 176, 307, 369, 453, 495, 563, 581
CviQI	GTAC	1 cut(s)	343
DpnI	GATC	4 cut(s)	66, 126, 193, 537
DpnII	GATC	4 cut(s)	64, 124, 191, 535
Eam1104I	CTCTTC	1 cut(s)	416
EarI	CTCTTC	1 cut(s)	416
Eco130I	CCWWGG	1 cut(s)	72
Eco24I	GRGCYC	1 cut(s)	497
Eco47I	GGWCC	1 cut(s)	436
Eco88I	CYCGRG	1 cut(s)	448
EcoT14I	CCWWGG	1 cut(s)	72
EcoT38I	GRGCYC	1 cut(s)	497
ErhI	CCWWGG	1 cut(s)	72
FaeI	CATG	4 cut(s)	76, 106, 175, 491
FaqI	GGGAC	1 cut(s)	449
FatI	CATG	4 cut(s)	72, 102, 171, 487
FbaI	TGATCA	1 cut(s)	124
FokI	GGATG	1 cut(s)	332
FriOI	GRGCYC	1 cut(s)	497
FspBI	CTAG	1 cut(s)	27
GsuI	CTGGAG	1 cut(s)	329
HaeIII	GGCC	1 cut(s)	39
HapII	CCGG	2 cut(s)	36, 161
Hin1II	CATG	4 cut(s)	76, 106, 175, 491
HinfI	GANTC	4 cut(s)	16, 134, 327, 446
HpaII	CCGG	2 cut(s)	36, 161
Hpy166II	GTNNAC	1 cut(s)	481
Hpy188I	TCNGA	4 cut(s)	15, 94, 293, 304
Hpy188III	TCNNGA	4 cut(s)	131, 213, 361, 488
Hpy8I	GTNNAC	1 cut(s)	481
HpyAV	CCTTC	1 cut(s)	78
HpyCH4III	ACNGT	3 cut(s)	8, 154, 573
HpyCH4V	TGCA	4 cut(s)	206, 240, 411, 481
HpyF10VI	GCNNNNNNNGC	1 cut(s)	36
Hsp92II	CATG	4 cut(s)	76, 106, 175, 491
KroI	GCCGGC	1 cut(s)	35
KroNI	GCCGGC	1 cut(s)	37
Ksp22I	TGATCA	1 cut(s)	124
Kzo9I	GATC	4 cut(s)	64, 124, 191, 535
LmnI	GCTCC	1 cut(s)	304
LpnPI	CCDG	7 cut(s)	49, 174, 174, 208, 293, 530, 543
LweI	GCATC	2 cut(s)	69, 510
MaeI	CTAG	1 cut(s)	27
MalI	GATC	4 cut(s)	66, 126, 193, 537
MbiI	CCGCTC	1 cut(s)	183
MboI	GATC	4 cut(s)	64, 124, 191, 535
MboII	GAAGA	5 cut(s)	129, 433, 455, 558, 567
MflI	RGATCY	2 cut(s)	191, 535
MhlI	GDGCHC	2 cut(s)	483, 497
MluCI	AATT	1 cut(s)	382
MlyI	GAGTC	1 cut(s)	440
MnlI	CCTC	9 cut(s)	241, 246, 304, 330, 398, 417, 426, 534, 537
MroNI	GCCGGC	1 cut(s)	35
MseI	TTAA	1 cut(s)	146
MslI	CAYNNNNRTG	1 cut(s)	486
MspI	CCGG	2 cut(s)	36, 161
MwoI	GCNNNNNNNGC	1 cut(s)	36
NaeI	GCCGGC	1 cut(s)	37
NcoI	CCATGG	1 cut(s)	72
NdeII	GATC	4 cut(s)	64, 124, 191, 535
NgoMIV	GCCGGC	1 cut(s)	35
NlaIII	CATG	4 cut(s)	76, 106, 175, 491
NlaIV	GGNNCC	3 cut(s)	193, 437, 537
PaeR7I	CTCGAG	1 cut(s)	448
PagI	TCATGA	1 cut(s)	487
PdiI	GCCGGC	1 cut(s)	37
PfeI	GAWTC	3 cut(s)	16, 134, 327
PleI	GAGTC	1 cut(s)	440
PpsI	GAGTC	1 cut(s)	440
PspN4I	GGNNCC	3 cut(s)	193, 437, 537
PspPI	GGNCC	2 cut(s)	38, 436
PspXI	VCTCGAGB	1 cut(s)	448
PsuI	RGATCY	2 cut(s)	191, 535
RsaI	GTAC	1 cut(s)	344
RsaNI	GTAC	1 cut(s)	343
RseI	CAYNNNNRTG	1 cut(s)	486
SaqAI	TTAA	1 cut(s)	146
Sau3AI	GATC	4 cut(s)	64, 124, 191, 535
Sau96I	GGNCC	2 cut(s)	38, 436
SchI	GAGTC	1 cut(s)	440
SduI	GDGCHC	2 cut(s)	483, 497
SetI	ASST	5 cut(s)	32, 309, 315, 455, 565
SfaNI	GCATC	2 cut(s)	69, 510
Sfr274I	CTCGAG	1 cut(s)	448
SinI	GGWCC	1 cut(s)	436
SlaI	CTCGAG	1 cut(s)	448
SmiMI	CAYNNNNRTG	1 cut(s)	486
SmlI	CTYRAG	1 cut(s)	448
SmoI	CTYRAG	1 cut(s)	448
Sse9I	AATT	1 cut(s)	382
SsiI	CCGC	1 cut(s)	181
SspMI	CTAG	1 cut(s)	27
StyI	CCWWGG	1 cut(s)	72
TaaI	ACNGT	3 cut(s)	8, 154, 573
TaqI	TCGA	2 cut(s)	63, 449
TaqII	GACCGA	1 cut(s)	453
TasI	AATT	1 cut(s)	382
TfiI	GAWTC	3 cut(s)	16, 134, 327
Tru1I	TTAA	1 cut(s)	146
Tru9I	TTAA	1 cut(s)	146
TscAI	CASTG	1 cut(s)	202
TspDTI	ATGAA	3 cut(s)	91, 160, 248
TspGWI	ACGGA	1 cut(s)	360
TspRI	CASTG	1 cut(s)	202
VneI	GTGCAC	1 cut(s)	479
VpaK11BI	GGWCC	1 cut(s)	436
XhoI	CTCGAG	1 cut(s)	448
XspI	CTAG	1 cut(s)	27

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.