Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002142

Physical Location & Seq

Genomic Coordinates Reverse (-)

17870805 .. 17882988

Gene Structure 12184 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G174100.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3813 bp

ATGGCAGAGGACAGCCTACGGATTGGTGGGTTTTCTTCTGGTCTGGCTGTGATATTGAATGATGAGGATAGTAAAGAGAATTCGTCGAAAACCCATCTTGTTTCATACTGTGATGATTTTGGCCATCAATCAGTGGAGCGGACCTTAGAATATGTTCTTGGTCTCCCTAACAAATCTTTTGGTTTGTTGCCCAGTCCAATTGATAGCAATCTAGTTCGCTGCATTATACAGAAAGAATTCTCTAAATTGCATGCAAATTCAAGTGCTTTGGTTAGAAACAGAGATGGAGTTTGTATTCCTGGGAATGGCTGTGGTCCCCACATCGTTGGTCTTGATGAATTCAGTATTCGTGGTGATATTAGACCTATTAAGCCACCTTTGCTTGTAGAGAGCTTAGCAATGTTCAGCAGTGCCAGAGCTAATGCTTTTGTATGGAAATGTAAATGGATGTATGAAGTTATTCTAGAAACTTCAGGTATTCAGCAACTTGGATGGGCAACCGTTTCTTGCCCTTTTACTGACCATAAGGGTGTGGGTGATGCTGATGATTCGTATGCATTTGATGGGAGGAGGGTTAGAAAATGGAACAAGGAAGCTGAGCCATATGGTCAATCTTGGGTTGTTGGTGATGCTATTGGCTGCTGCATAGATTTGGATTGTAATGAAATATCATTCTACAGAAATGGTGTCTCACTTGGGGCTGCATTTCATGGCATTCGTAAGATGGGACCAGTATCTGGATATTATCCTGCAATTTCTCTTTCTCAGGGTGAACGATGCGAACTAAATTTTGGGGCCCGCCCCTTTAGATTTCCCATTGAAGGCTACCTTCCCCTTCAAGAACCTCCATCCTTAATTCCGGTTGCTACTCAGTTGCTGTGTTGCTTGTCAAGGCTATTGGGTATGCACTCTGTTGAGCAGGCAAAGCATTCTTCTGTTCAAAAATGGAGGCGACTGAAGAGGTTTGTTTCACATGAAGAACTTTTTTATCCTGCTTCTCATGGGATATGTGAGGAATTTTTTTCTGTACTTGGAGTGGATGTTTGGAGCATAGAGTACATTGCCTGGGGTCCATTTCTGTCATTCATGATGGAAGTGTTTGGGCAGCAGGTGCCTCATGATTATTCAAGCTTAGATAGAGTTCTCGATGTCTTTCTGGAATTTGAAGGATCACGTATGCTGTTTGAACATTTCATAAATGCCCTGGCGTGTGGTTGCAAAATAGCTCCACTGGTTCTAAAAGAGTGCCCATGTTCAGGGTCATACCCATACCTCGCGTTGGCATGCCATATCTTGAGACGACAAGAGCTTATGGTGCTTTGGTGGAAATCGCCTGATTTTGAATTCCTTTTCGAAGGGTTCCTATCACGGAAGAATCCGAATAAGCATGATCTTGAATCCATGATGCCTTCTGTTTCGTGGCCTGGTTCATGTGAGGATGTGTCATATGAAAGCACCATGGCGTTGACAACTAAAGCTTTATCTGAAGCAGTCAGTAAGATTGAGGAGAAGCATAGGGATCTCTGTCGCTTGGTCATACAGTTCATACCGCCTGTGACACCTCCCCAGTTGCCTGGTTCAGTGTTCAGAACATTTTTACAGAACATTCTACTAAAGAACAGAGGAGCTGACCGGAACCTTCCACCTCCTGGAGTTTCAAGCAATTCCGTTCTTGTTTCTTTGTATACAGTTATTCTTCATTTTTTATCTGAAGGGTTTGCAATGGGGGATATTTGTGGCTGGTTGAAGAGCAGTGAAAATGGTCCTGATGTTGGTTTTCTTCATAGGGGTGGTCAACGAAGCTTTCCCGTAGGTTTATTTCTTAGAAATGATCTTCATCGAAATGAAAATTCTAGGCTTGGAGGATCGTTTAGTCATCTCTCGAAGTCAAACCCTGTAAATGATGAGGAAGCAGAAGTAATTCGGTGGGAGGAAGGCTGTATGGATGATGAAGAAACCAGAGTGACTCATTCAAGTACAAAAAAACCATGTTGTTGCTCATGTTATAATGATGATTTTACAAGAATCTCAAAGTATCCGATTAGATACACAGCCAAAGGTTCTCGTGTCCATTGCAGTCCTATTCCAGAGAGATCTGCTCATGTTGCTACAGAATGCAGTACTGGAAATTTGAATGATGAATTAGCAGATAAACCTAGCTCTAGTTATCAATCTGAATCAGAGTTTAGTTATTGCCCAGTGCAGCAATTGAGGTTTGTACCAAGGGAAAGTAATATGTCTTCAGCCACACTCAGAGAAGAGGAACTTCTAGATGTTCTGTTGCTGTTGTATCATATAGGTCTTGCACCAAATTTTAAGCAGGCATCGTACTACATGTCTCACCAGTCGCAGTCAATATCCCTCCTGGAAGAAGCTGATAAACAAATAAGAGAAAAAGCTAGTAATGAGCAATTAAAGCGTTTGAAAGAAGCCCGCAACAGTTATAGAGAAGAAGTTATTAATTGTGTCAGACAATGTGCTTGGTACCGTATTACTCTAATTTCTCGATGGAAGCAAAGAGGAATGTATGCAACATGCATGTGGACTGTCCAGTTGCTTCTGGTTCTTAGCAAAGTGGATCTACTGTTCCTGTATATCCCTGAGTATTATCTGGAAGCTCTGGTTGATTGCTTCCATGTGTTGCGCAAAAGTGATCCTCCCTTTGTACCTTCATCAATATTTATCAAGCAAGGCCTTGCTTCATTTGTAACTTTTGTGGTCACGCACTTCAATGATCCTCGAATATCGAGTGCTGATCTAAGGGACCTGCTTCTCCAATCGATCTCAGTCTTGGTACAGTACAAAGAATATTTGGCCATTTTTGAGAGTAATGAAGCAGCCACACAGAGGATGCCAAAGGCATTGCTGTCAGCATTTGATAATAGATCCTGGATCCCAGTGACAAACATTCTTCTGCGTTTGTGCAAGGGATCTGGCTTTGGTTCTTCAAAGCATGGAGAGTCGTCATCATCTGTTGTCTTCCAGAGATTGTTAGGGGAAACTTGTGTCAGTGATGAAGAGTTGTTCTCAGCTTTTCTCAATCGCCTGTTTAACACTCTCAGCTGGACAATGACTGAATTCTCAGTTTCAGTTAGAGAAATGCAAGAGAAGTACCAGGTATTAGAGTTCCAGCAAAAGAAATGCAGTGTCATATTTGATCTTTCATGCAACCTTGCAAGGGTTTTGGAGTTCTGTACCCATGCGATACCTCGAGCATTTCTATCTGGAGCTGAAACAAACCTTCGAAGGTTAACTGAGTTAATAGTCTTTATTCTGAGCCACATAACATCAGCAGAAGATGCTGAGTTTTTTGACTTGTCGCTGAGAAGACATGGTCAATCCTTAGAAAAAGTAAACCGAGGAATGATATTGGCACCTCTTGTTGGTATTATCTTGAATTTGTTAAATGCTAGTGAACAGATGGAATGCATGGAACACAACGATGTAGTGAGCATCTTCGCAAGCATGGGTTGCCTTGACAGTTTTCATTGCAGATTCCAATACCTTTTGGATTACAACTGGGCTGGAACCTTTAGAGGCGATGCTTATCTTGTAAAACTTGCCCAGTTAGAGAATTTTCTTAGCCTCCTTAGCCAGAGCCAATCACAAGAAAATACGATATACAGGGGAGAAACAGATGGGAATGATGACATGTGCTGCATTTGTTATGCCTGTGAAGCAGATGCCGAGTTTTCACCTTGTTCGCATAGGTCTTGTTATGGCTGCATAACGAGGCATCTTTTGAATTCCCACAGATGCTTTTTTTGCAATGCAACAGTTGTGGATGTCGTCCGGATTAGTGAGAAAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030163 GO:0032446 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0060154 GO:0065007 GO:0070647 GO:0071704 GO:0098586 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SPRY Ufd2P_core zf-C3HC4_3

Protein Analysis

1271

Amino Acids

143.52

Weight (kDa)

5.86

Isoelectric Point (pI)

50.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22010 AT2G22010
fragaria_vesca	FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_7g04730 FvH4_7g04730
malus_domestica	MD01G1017400.v1.1 MD15G1333600.v1.1
prunus_persica	Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1
pyrus_communis	pycom01g04820 pycom01g04830 pycom15g29160 pycom15g29170
rosa_chinensis	RchiOBHm_Chr2g0116231
rosa_laevigata	RLG00000018249
rosa_multiflora	Rmu_sc0003499.1_g000012 Rmu_sc0004888.1_g000064
rosa_roxburghii	Rroxscaffold_2G00127410
rosa_rugosa	Rorug02G0205000
rosa_samantha	Rh2AG260600 Rh2BG271700 Rh2CG266800 Rh2DG268800
rosa_wichuraiana	Rw2G020430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2007
AarI	CACCTGC	1 cut(s)	1099
Acc16I	TGCGCA	1 cut(s)	2645
Acc36I	ACCTGC	2 cut(s)	1099, 2775
Acc65I	GGTACC	1 cut(s)	2484
AccB1I	GGYRCC	3 cut(s)	1111, 2484, 3373
AccB7I	CCANNNNNTGG	2 cut(s)	737, 1649
AccBSI	CCGCTC	1 cut(s)	139
AccI	GTMKAC	1 cut(s)	1685
AccII	CGCG	1 cut(s)	1277
AccIII	TCCGGA	1 cut(s)	3792
AciI	CCGC	4 cut(s)	139, 799, 1550, 2434
AcoI	YGGCCR	2 cut(s)	121, 2814
AcuI	CTGAAG	5 cut(s)	456, 977, 1506, 1731, 2226
AflIII	ACRYGT	2 cut(s)	2334, 3651
AjnI	CCWGG	9 cut(s)	298, 1064, 1203, 1423, 1573, 1648, 2364, 2888, 3114
AjuI	GAANNNNNNNTTGG	4 cut(s)	141, 173, 774, 806
AloI	GAACNNNNNNTCC	2 cut(s)	2570, 2602
Alw26I	GTCTC	4 cut(s)	167, 694, 1291, 2343
AlwNI	CAGNNNCTG	2 cut(s)	737, 877
Ama87I	CYCGRG	1 cut(s)	3210
Aor13HI	TCCGGA	1 cut(s)	3792
AoxI	GGCC	5 cut(s)	121, 795, 1421, 2692, 2814
ApaI	GGGCCC	1 cut(s)	799
ApeKI	GCWGC	9 cut(s)	219, 639, 642, 701, 1105, 2203, 2837, 3657, 3723
AseI	ATTAAT	1 cut(s)	2460
Asp700I	GAANNNNTTC	4 cut(s)	153, 236, 459, 1920
Asp718I	GGTACC	1 cut(s)	2484
AspLEI	GCGC	1 cut(s)	2646
AspS9I	GGNCC	8 cut(s)	141, 314, 728, 795, 796, 1070, 1763, 2764
AsuHPI	GGTGA	6 cut(s)	365, 548, 638, 782, 2333, 3687
AsuII	TTCGAA	2 cut(s)	1353, 3244
AvaI	CYCGRG	1 cut(s)	3210
AvaII	GGWCC	6 cut(s)	141, 314, 728, 1070, 1763, 2764
BaeGI	GKGCMC	2 cut(s)	799, 1250
BalI	TGGCCA	2 cut(s)	123, 2816
BamHI	GGATCC	1 cut(s)	2892
BanI	GGYRCC	3 cut(s)	1111, 2484, 3373
BanII	GRGCYC	1 cut(s)	799
BarI	GAAGNNNNNNTAC	2 cut(s)	2224, 2256
BauI	CACGAG	1 cut(s)	2064
BbsI	GAAGAC	3 cut(s)	2232, 2971, 3334
BbvI	GCAGC	9 cut(s)	206, 626, 629, 688, 1117, 2215, 2849, 3644, 3710
BciT130I	CCWGG	9 cut(s)	300, 1066, 1205, 1425, 1575, 1650, 2366, 2890, 3116
BciVI	GTATCC	1 cut(s)	2046
BcoDI	GTCTC	4 cut(s)	167, 694, 1291, 2343
BfaI	CTAG	8 cut(s)	212, 464, 1854, 2157, 2163, 2270, 2400, 3411
BfmI	CTRYAG	2 cut(s)	676, 2109
BfuAI	ACCTGC	2 cut(s)	1099, 2775
BfuI	GTATCC	1 cut(s)	2046
BglII	AGATCT	1 cut(s)	2093
BisI	GCNGC	9 cut(s)	220, 640, 643, 702, 1106, 2204, 2838, 3658, 3724
BlpI	GCTNAGC	2 cut(s)	394, 597
BlsI	GCNGC	9 cut(s)	221, 641, 644, 703, 1107, 2205, 2839, 3659, 3725
BmcAI	AGTACT	1 cut(s)	2122
Bme1390I	CCNGG	9 cut(s)	300, 1066, 1205, 1425, 1575, 1650, 2366, 2890, 3116
Bme18I	GGWCC	6 cut(s)	141, 314, 728, 1070, 1763, 2764
BmeT110I	CYCGRG	1 cut(s)	3210
BmgT120I	GGNCC	8 cut(s)	141, 314, 728, 795, 796, 1070, 1763, 2764
BmrFI	CCNGG	9 cut(s)	300, 1066, 1205, 1425, 1575, 1650, 2366, 2890, 3116
BmrI	ACTGGG	6 cut(s)	186, 1561, 2192, 2891, 3529, 3559
BmuI	ACTGGG	6 cut(s)	186, 1561, 2192, 2891, 3529, 3559
BpiI	GAAGAC	3 cut(s)	2232, 2971, 3334
BplI	GAGNNNNNCTC	4 cut(s)	2083, 2115, 3011, 3043
BpmI	CTGGAG	2 cut(s)	1671, 3246
Bpu10I	CCTNAGC	1 cut(s)	3590
Bpu1102I	GCTNAGC	2 cut(s)	394, 597
Bpu14I	TTCGAA	2 cut(s)	1353, 3244
BpuEI	CTTGAG	1 cut(s)	1315
Bsa29I	ATCGAT	1 cut(s)	2780
BsaAI	YACGTR	1 cut(s)	1175
BsaBI	GATNNNNATC	3 cut(s)	207, 1836, 3546
BsaI	GGTCTC	1 cut(s)	167
BsaJI	CCNNGG	6 cut(s)	299, 1065, 1203, 1458, 2222, 3358
BsaWI	WCCGGW	3 cut(s)	859, 1632, 3792
BsaXI	ACNNNNNCTCC	2 cut(s)	1026, 1056
Bse3DI	GCAATG	7 cut(s)	405, 1059, 1728, 2071, 2861, 3487, 3775
Bse8I	GATNNNNATC	3 cut(s)	207, 1836, 3546
BseAI	TCCGGA	1 cut(s)	3792
BseBI	CCWGG	9 cut(s)	300, 1066, 1205, 1425, 1575, 1650, 2366, 2890, 3116
BseCI	ATCGAT	1 cut(s)	2780
BseDI	CCNNGG	6 cut(s)	299, 1065, 1203, 1458, 2222, 3358
BseGI	GGATG	8 cut(s)	453, 497, 848, 1045, 1444, 1951, 2856, 3790
BseJI	GATNNNNATC	3 cut(s)	207, 1836, 3546
BseMI	GCAATG	7 cut(s)	405, 1059, 1728, 2071, 2861, 3487, 3775
BseRI	GAGGAG	3 cut(s)	583, 1520, 1638
BseSI	GKGCMC	2 cut(s)	799, 1250
BseXI	GCAGC	9 cut(s)	206, 626, 629, 688, 1117, 2215, 2849, 3644, 3710
BsgI	GTGCAG	1 cut(s)	2222
Bsh1236I	CGCG	1 cut(s)	1277
BshFI	GGCC	5 cut(s)	123, 797, 1423, 2694, 2816
BshNI	GGYRCC	3 cut(s)	1111, 2484, 3373
BshVI	ATCGAT	1 cut(s)	2780
BsiHKCI	CYCGRG	1 cut(s)	3210
BsiSI	CCGG	3 cut(s)	860, 1633, 3793
BslFI	GGGAC	3 cut(s)	300, 741, 2777
BsmAI	GTCTC	4 cut(s)	167, 694, 1291, 2343
BsmBI	CGTCTC	1 cut(s)	1291
BsmFI	GGGAC	3 cut(s)	300, 741, 2777
BsmI	GAATGC	4 cut(s)	714, 928, 2120, 3431
BsnI	GGCC	5 cut(s)	123, 797, 1423, 2694, 2816
Bso31I	GGTCTC	1 cut(s)	167
BsoBI	CYCGRG	1 cut(s)	3210
Bsp119I	TTCGAA	2 cut(s)	1353, 3244
Bsp120I	GGGCCC	1 cut(s)	795
Bsp1286I	GDGCHC	2 cut(s)	799, 1250
Bsp13I	TCCGGA	1 cut(s)	3792
Bsp1720I	GCTNAGC	2 cut(s)	394, 597
Bsp19I	CCATGG	1 cut(s)	1458
BspACI	CCGC	4 cut(s)	139, 799, 1550, 2434
BspANI	GGCC	5 cut(s)	123, 797, 1423, 2694, 2816
BspDI	ATCGAT	1 cut(s)	2780
BspEI	TCCGGA	1 cut(s)	3792
BspFNI	CGCG	1 cut(s)	1277
BspHI	TCATGA	2 cut(s)	1086, 1117
BspMI	ACCTGC	2 cut(s)	1099, 2775
BspQI	GCTCTTC	1 cut(s)	1742
BspT104I	TTCGAA	2 cut(s)	1353, 3244
BspT107I	GGYRCC	3 cut(s)	1111, 2484, 3373
BspTNI	GGTCTC	1 cut(s)	167
BsrBI	CCGCTC	1 cut(s)	139
BsrDI	GCAATG	7 cut(s)	405, 1059, 1728, 2071, 2861, 3487, 3775
BssECI	CCNNGG	6 cut(s)	299, 1065, 1203, 1458, 2222, 3358
BssNAI	GTATAC	1 cut(s)	1686
BssSI	CACGAG	1 cut(s)	2064
BssT1I	CCWWGG	2 cut(s)	1458, 2222
Bst1107I	GTATAC	1 cut(s)	1686
Bst2BI	CACGAG	1 cut(s)	2064
Bst2UI	CCWGG	9 cut(s)	300, 1066, 1205, 1425, 1575, 1650, 2366, 2890, 3116
Bst6I	CTCTTC	4 cut(s)	953, 1742, 2253, 3012
BstAPI	GCANNNNNTGC	3 cut(s)	1111, 3299, 3471
BstBAI	YACGTR	1 cut(s)	1175
BstBI	TTCGAA	2 cut(s)	1353, 3244
BstC8I	GCNNGC	7 cut(s)	252, 799, 921, 1285, 2322, 2434, 3463
BstDSI	CCRYGG	1 cut(s)	1458
BstF5I	GGATG	8 cut(s)	453, 497, 848, 1045, 1444, 1951, 2856, 3790
BstFNI	CGCG	1 cut(s)	1277
BstHHI	GCGC	1 cut(s)	2646
BstMAI	GTCTC	4 cut(s)	167, 694, 1291, 2343
BstNI	CCWGG	9 cut(s)	300, 1066, 1205, 1425, 1575, 1650, 2366, 2890, 3116
BstNSI	RCATGY	6 cut(s)	254, 1287, 2338, 2538, 2542, 3655
BstSCI	CCNGG	9 cut(s)	298, 1064, 1203, 1423, 1573, 1648, 2364, 2888, 3114
BstSFI	CTRYAG	2 cut(s)	676, 2109
BstSLI	GKGCMC	2 cut(s)	799, 1250
BstUI	CGCG	1 cut(s)	1277
BstV1I	GCAGC	9 cut(s)	206, 626, 629, 688, 1117, 2215, 2849, 3644, 3710
BstV2I	GAAGAC	3 cut(s)	2232, 2971, 3334
BstX2I	RGATCY	6 cut(s)	1519, 2093, 2578, 2885, 2892, 2930
BstXI	CCANNNNNNTGG	2 cut(s)	326, 1574
BstYI	RGATCY	6 cut(s)	1519, 2093, 2578, 2885, 2892, 2930
BstZ17I	GTATAC	1 cut(s)	1686
Bsu15I	ATCGAT	1 cut(s)	2780
BsuI	GTATCC	1 cut(s)	2046
BsuRI	GGCC	5 cut(s)	123, 797, 1423, 2694, 2816
BsuTUI	ATCGAT	1 cut(s)	2780
BtgI	CCRYGG	1 cut(s)	1458
BtgZI	GCGATG	1 cut(s)	3555
BtsCI	GGATG	8 cut(s)	453, 497, 848, 1045, 1444, 1951, 2856, 3790
BtsI	GCAGTG	3 cut(s)	415, 1759, 3151
BtsIMutI	CAGTG	9 cut(s)	138, 415, 1229, 1587, 1759, 2205, 2904, 3016, 3151
BveI	ACCTGC	2 cut(s)	1099, 2775
Cac8I	GCNNGC	7 cut(s)	252, 799, 921, 1285, 2322, 2434, 3463
CaiI	CAGNNNCTG	2 cut(s)	737, 877
CciI	TCATGA	2 cut(s)	1086, 1117
CfoI	GCGC	1 cut(s)	2646
Cfr13I	GGNCC	8 cut(s)	141, 314, 728, 795, 796, 1070, 1763, 2764
ClaI	ATCGAT	1 cut(s)	2780
CsiI	ACCWGGT	1 cut(s)	3114
CspCI	CAANNNNNGTGG	2 cut(s)	3762, 3797
EaeI	YGGCCR	2 cut(s)	121, 2814
Eam1104I	CTCTTC	4 cut(s)	953, 1742, 2253, 3012
EarI	CTCTTC	4 cut(s)	953, 1742, 2253, 3012
Eco130I	CCWWGG	2 cut(s)	1458, 2222
Eco147I	AGGCCT	1 cut(s)	2694
Eco24I	GRGCYC	1 cut(s)	799
Eco31I	GGTCTC	1 cut(s)	167
Eco47I	GGWCC	6 cut(s)	141, 314, 728, 1070, 1763, 2764
Eco57I	CTGAAG	5 cut(s)	456, 977, 1506, 1731, 2226
Eco88I	CYCGRG	1 cut(s)	3210
EcoO109I	RGGNCCY	2 cut(s)	795, 2764
EcoRI	GAATTC	6 cut(s)	79, 236, 338, 1343, 3077, 3745
EcoRII	CCWGG	9 cut(s)	298, 1064, 1203, 1423, 1573, 1648, 2364, 2888, 3114
EcoT14I	CCWWGG	2 cut(s)	1458, 2222
EcoT22I	ATGCAT	3 cut(s)	559, 2540, 3431
EcoT38I	GRGCYC	1 cut(s)	799
ErhI	CCWWGG	2 cut(s)	1458, 2222
Esp3I	CGTCTC	1 cut(s)	1291
FalI	AAGNNNNNCTT	4 cut(s)	813, 845, 2250, 2282
FaqI	GGGAC	3 cut(s)	300, 741, 2777
FauI	CCCGC	2 cut(s)	806, 2441
FauNDI	CATATG	2 cut(s)	604, 1447
FblI	GTMKAC	1 cut(s)	1685
Fnu4HI	GCNGC	9 cut(s)	220, 640, 643, 702, 1106, 2204, 2838, 3658, 3724
FokI	GGATG	8 cut(s)	460, 504, 835, 1052, 1451, 1958, 2863, 3797
FriOI	GRGCYC	1 cut(s)	799
Fsp4HI	GCNGC	9 cut(s)	220, 640, 643, 702, 1106, 2204, 2838, 3658, 3724
FspBI	CTAG	8 cut(s)	212, 464, 1854, 2157, 2163, 2270, 2400, 3411
FspI	TGCGCA	1 cut(s)	2645
GlaI	GCGC	1 cut(s)	2645
GluI	GCNGC	9 cut(s)	220, 640, 643, 702, 1106, 2204, 2838, 3658, 3724
GsuI	CTGGAG	2 cut(s)	1671, 3246
HaeIII	GGCC	5 cut(s)	123, 797, 1423, 2694, 2816
HapII	CCGG	3 cut(s)	860, 1633, 3793
HhaI	GCGC	1 cut(s)	2646
Hin6I	GCGC	1 cut(s)	2644
HinP1I	GCGC	1 cut(s)	2644
HincII	GTYRAC	3 cut(s)	1467, 1796, 3252
HindII	GTYRAC	3 cut(s)	1467, 1796, 3252
HindIII	AAGCTT	3 cut(s)	1129, 1476, 1801
HinfI	GANTC	8 cut(s)	548, 1375, 1397, 1966, 2025, 2177, 2960, 3495
HpaI	GTTAAC	1 cut(s)	3252
HpaII	CCGG	3 cut(s)	860, 1633, 3793
HphI	GGTGA	6 cut(s)	365, 548, 638, 782, 2333, 3687
Hpy166II	GTNNAC	8 cut(s)	773, 1467, 1686, 1796, 2544, 3252, 3355, 3416
Hpy8I	GTNNAC	8 cut(s)	773, 1467, 1686, 1796, 2544, 3252, 3355, 3416
Hpy99I	CGWCG	1 cut(s)	88
HpyCH4IV	ACGT	1 cut(s)	1174
HpySE526I	ACGT	1 cut(s)	1174
HspAI	GCGC	1 cut(s)	2644
Kpn2I	TCCGGA	1 cut(s)	3792
KpnI	GGTACC	1 cut(s)	2488
KspAI	GTTAAC	1 cut(s)	3252
LguI	GCTCTTC	1 cut(s)	1742
LmnI	GCTCC	5 cut(s)	136, 1047, 1231, 1625, 3227
Lsp1109I	GCAGC	9 cut(s)	206, 626, 629, 688, 1117, 2215, 2849, 3644, 3710
MabI	ACCWGGT	1 cut(s)	3114
MaeI	CTAG	8 cut(s)	212, 464, 1854, 2157, 2163, 2270, 2400, 3411
MaeII	ACGT	1 cut(s)	1174
MaeIII	GTNAC	5 cut(s)	1555, 1963, 2707, 2719, 2899
MbiI	CCGCTC	1 cut(s)	139
MfeI	CAATTG	2 cut(s)	198, 2207
MflI	RGATCY	6 cut(s)	1519, 2093, 2578, 2885, 2892, 2930
MhlI	GDGCHC	2 cut(s)	799, 1250
MlsI	TGGCCA	2 cut(s)	123, 2816
MluNI	TGGCCA	2 cut(s)	123, 2816
MlyI	GAGTC	2 cut(s)	1960, 2969
Mox20I	TGGCCA	2 cut(s)	123, 2816
Mph1103I	ATGCAT	3 cut(s)	559, 2540, 3431
MroI	TCCGGA	1 cut(s)	3792
MroXI	GAANNNNTTC	4 cut(s)	153, 236, 459, 1920
MscI	TGGCCA	2 cut(s)	123, 2816
MseI	TTAA	9 cut(s)	369, 854, 2316, 2414, 2460, 3051, 3251, 3260, 3404
MslI	CAYNNNNRTG	6 cut(s)	528, 1788, 1842, 2539, 2730, 3441
Msp20I	TGGCCA	2 cut(s)	123, 2816
MspA1I	CMGCKG	1 cut(s)	3063
MspI	CCGG	3 cut(s)	860, 1633, 3793
MspR9I	CCNGG	9 cut(s)	300, 1066, 1205, 1425, 1575, 1650, 2366, 2890, 3116
MunI	CAATTG	2 cut(s)	198, 2207
Mva1269I	GAATGC	4 cut(s)	714, 928, 2120, 3431
MvaI	CCWGG	9 cut(s)	300, 1066, 1205, 1425, 1575, 1650, 2366, 2890, 3116
MvnI	CGCG	1 cut(s)	1277
NcoI	CCATGG	1 cut(s)	1458
NdeI	CATATG	2 cut(s)	604, 1447
NmeAIII	GCCGAG	1 cut(s)	3712
NmuCI	GTSAC	4 cut(s)	1555, 1963, 2719, 2899
NsbI	TGCGCA	1 cut(s)	2645
NsiI	ATGCAT	3 cut(s)	559, 2540, 3431
NspI	RCATGY	6 cut(s)	254, 1287, 2338, 2538, 2542, 3655
NspV	TTCGAA	2 cut(s)	1353, 3244
PaeI	GCATGC	2 cut(s)	254, 1287
PaeR7I	CTCGAG	1 cut(s)	3210
PagI	TCATGA	2 cut(s)	1086, 1117
PaqCI	CACCTGC	1 cut(s)	1099
PceI	AGGCCT	1 cut(s)	2694
PciI	ACATGT	2 cut(s)	2334, 3651
PciSI	GCTCTTC	1 cut(s)	1742
PctI	GAATGC	4 cut(s)	714, 928, 2120, 3431
PdmI	GAANNNNTTC	4 cut(s)	153, 236, 459, 1920
PfeI	GAWTC	6 cut(s)	548, 1375, 1397, 2025, 2177, 3495
PflFI	GACNNNGTC	1 cut(s)	3333
PflMI	CCANNNNNTGG	2 cut(s)	737, 1649
PfoI	TCCNGGA	3 cut(s)	1648, 2364, 2888
PkrI	GCNGC	9 cut(s)	221, 641, 644, 703, 1107, 2205, 2839, 3659, 3725
PleI	GAGTC	2 cut(s)	1960, 2968
PpsI	GAGTC	2 cut(s)	1960, 2968
Ppu21I	YACGTR	1 cut(s)	1175
PpuMI	RGGWCCY	1 cut(s)	2764
PscI	ACATGT	2 cut(s)	2334, 3651
PshBI	ATTAAT	1 cut(s)	2460
PsiI	TTATAA	1 cut(s)	2007
Psp5II	RGGWCCY	1 cut(s)	2764
Psp6I	CCWGG	9 cut(s)	298, 1064, 1203, 1423, 1573, 1648, 2364, 2888, 3114
PspGI	CCWGG	9 cut(s)	298, 1064, 1203, 1423, 1573, 1648, 2364, 2888, 3114
PspOMI	GGGCCC	1 cut(s)	795
PspPI	GGNCC	8 cut(s)	141, 314, 728, 795, 796, 1070, 1763, 2764
PspPPI	RGGWCCY	1 cut(s)	2764
PspXI	VCTCGAGB	1 cut(s)	3210
PstNI	CAGNNNCTG	2 cut(s)	737, 877
PsuI	RGATCY	6 cut(s)	1519, 2093, 2578, 2885, 2892, 2930
PsyI	GACNNNGTC	1 cut(s)	3333
PvuII	CAGCTG	1 cut(s)	3063
RseI	CAYNNNNRTG	6 cut(s)	528, 1788, 1842, 2539, 2730, 3441
SapI	GCTCTTC	1 cut(s)	1742
SaqAI	TTAA	9 cut(s)	369, 854, 2316, 2414, 2460, 3051, 3251, 3260, 3404
SatI	GCNGC	9 cut(s)	220, 640, 643, 702, 1106, 2204, 2838, 3658, 3724
Sau96I	GGNCC	8 cut(s)	141, 314, 728, 795, 796, 1070, 1763, 2764
ScaI	AGTACT	1 cut(s)	2122
SchI	GAGTC	2 cut(s)	1960, 2969
ScrFI	CCNGG	9 cut(s)	300, 1066, 1205, 1425, 1575, 1650, 2366, 2890, 3116
SduI	GDGCHC	2 cut(s)	799, 1250
SexAI	ACCWGGT	1 cut(s)	3114
SfcI	CTRYAG	2 cut(s)	676, 2109
Sfr274I	CTCGAG	1 cut(s)	3210
SfuI	TTCGAA	2 cut(s)	1353, 3244
SinI	GGWCC	6 cut(s)	141, 314, 728, 1070, 1763, 2764
SlaI	CTCGAG	1 cut(s)	3210
SmiMI	CAYNNNNRTG	6 cut(s)	528, 1788, 1842, 2539, 2730, 3441
SmlI	CTYRAG	2 cut(s)	1294, 3210
SmoI	CTYRAG	2 cut(s)	1294, 3210
SphI	GCATGC	2 cut(s)	254, 1287
SseBI	AGGCCT	1 cut(s)	2694
SsiI	CCGC	4 cut(s)	139, 799, 1550, 2434
SspI	AATATT	2 cut(s)	2679, 2810
SspMI	CTAG	8 cut(s)	212, 464, 1854, 2157, 2163, 2270, 2400, 3411
StuI	AGGCCT	1 cut(s)	2694
StyD4I	CCNGG	9 cut(s)	298, 1064, 1203, 1423, 1573, 1648, 2364, 2888, 3114
StyI	CCWWGG	2 cut(s)	1458, 2222
TaiI	ACGT	1 cut(s)	1177
TatI	WGTACW	5 cut(s)	1027, 1056, 1976, 2120, 2799
TfiI	GAWTC	6 cut(s)	548, 1375, 1397, 2025, 2177, 3495
Tru1I	TTAA	9 cut(s)	369, 854, 2316, 2414, 2460, 3051, 3251, 3260, 3404
Tru9I	TTAA	9 cut(s)	369, 854, 2316, 2414, 2460, 3051, 3251, 3260, 3404
TscAI	CASTG	9 cut(s)	138, 415, 1236, 1587, 1759, 2205, 2904, 3016, 3151
TseFI	GTSAC	4 cut(s)	1555, 1963, 2719, 2899
TseI	GCWGC	9 cut(s)	219, 639, 642, 701, 1105, 2203, 2837, 3657, 3723
Tsp45I	GTSAC	4 cut(s)	1555, 1963, 2719, 2899
TspGWI	ACGGA	3 cut(s)	34, 1384, 1657
TspRI	CASTG	9 cut(s)	138, 415, 1236, 1587, 1759, 2205, 2904, 3016, 3151
Tth111I	GACNNNGTC	1 cut(s)	3333
Van91I	CCANNNNNTGG	2 cut(s)	737, 1649
VpaK11BI	GGWCC	6 cut(s)	141, 314, 728, 1070, 1763, 2764
VspI	ATTAAT	1 cut(s)	2460
XbaI	TCTAGA	2 cut(s)	463, 2269
XceI	RCATGY	6 cut(s)	254, 1287, 2338, 2538, 2542, 3655
XhoI	CTCGAG	1 cut(s)	3210
XmiI	GTMKAC	1 cut(s)	1685
XmnI	GAANNNNTTC	4 cut(s)	153, 236, 459, 1920
XspI	CTAG	8 cut(s)	212, 464, 1854, 2157, 2163, 2270, 2400, 3411
ZrmI	AGTACT	1 cut(s)	2122
Zsp2I	ATGCAT	3 cut(s)	559, 2540, 3431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.