Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0008926

Physical Location & Seq

Genomic Coordinates Reverse (-)

19944931 .. 19947957

Gene Structure 3027 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G192200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGGAGCGCTATGAGATATTGAAGGATATTGGGTCTGGGAATTTTGGGGTTGCAAAACTGGTTAAGGACAAATGGAGTGGGGAGCTCTATGCTGTGAAGTTTATTGAAAGAGGGCTGAAGATTGATGAGCATGTACAGAGGGAGATTATGAACCACAGGTCCTTGAAGCATCCCAATATAATAAGATTTAAAGAGGTCTTGTTAACACCAACCGACTTGGCCATTGTCATGGAATATGCAGCTGGAGGAGAACTGTTTGAAAGAATATGCACTGCTGGTAGATTCAGTGAGGACGAGGCAAGATATTTCTTTCAACAGCTGATTTCAGGAGTCAGTTATTGCCACTCAATGCAAATTTGCCACAGAGATCTTAAATTGGAGAACACACTTCTAGATGGAAGCTCAGCACCACGTCTCAAAATTTGCGATTTTGGTTATTCCAAGTCATCTGTGTTGCATTCCCAACCCAAATCAACTGTTGGAACACCGGCCTACATTGCACCAGAGGTCCTGTCAAGAAAAGAGTATGATGGGAAGATTGCGGATGTTTGGTCATGTGGGGTCACTTTGTATGTGATGCTTGTGGGTGCTTATCCCTTTGAAGATCCAGAAGATCCAAGAAACTTCAGAAAAACACTCCAGCGGATTCTTAGTGTCCACTACTCCATTCCTGACTATGTACGCGTTTCCATGGAATGTAGACATCTCCTTTCTCGAATTTTCGTTGCTAACCCCGAAAAGAGAATAACCATTCCAGAAATAAAGCAGCACCCCTGGTTTCTGAAAAATATACCAGTAGAATTCATGGAAGAAAACAACCTGCAAAGCAGTAATCAAAACCATGAACAACAATCATCCCAGAGCATTGAAGAGATTTTAGTAATAATTCAAGAAGCTCGAAAAGCTGCAAACGGTGCCAAAATTGGTGGGCTTTTACTGGGAAGTATGGATCTTGATGAGATAGATGATGCTGACATAGATGACATAGAGACAAGTGGTGATTTTGTTTGTGCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009987 GO:0010033 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0090351 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko01521 ko03010 ko04016 ko04066 ko04075 ko04150 ko04151 ko04371 ko04714 ko04910 ko05205 map01521 map03010 map04016 map04066 map04075 map04150 map04151 map04371 map04714 map04910 map05205

Pfam Domains

Protein Families

Pkinase

Protein Analysis

340

Amino Acids

38.55

Weight (kDa)

5.46

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G40010
fragaria_vesca	FvH4_1g20310 FvH4_1g20310 FvH4_1g20310 FvH4_1g20310 FvH4_1g20310
malus_domestica	MD01G1035000.v1.1 MD15G1321000.v1.1
prunus_persica	Prupe.6G192200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0112461
rosa_laevigata	RLG00000017982
rosa_multiflora	Rmu_sc0012231.1_g000005 Rmu_sc0036399.1_g000002
rosa_roxburghii	Rroxscaffold_2G00131410 Rroxscaffold_3G00222500
rosa_rugosa	Rorug02G0181000
rosa_samantha	Rh2AG234100 Rh2BG247600 Rh2CG238600 Rh2CG238700 Rh2DG241700
rosa_wichuraiana	Rw2G018130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	828
AccB1I	GGYRCC	1 cut(s)	914
AccI	GTMKAC	1 cut(s)	700
AccII	CGCG	1 cut(s)	684
AciI	CCGC	2 cut(s)	542, 643
AclWI	GGATC	3 cut(s)	599, 608, 957
AcoI	YGGCCR	1 cut(s)	219
AcsI	RAATTY	5 cut(s)	40, 354, 420, 717, 800
AcuI	CTGAAG	2 cut(s)	137, 610
AfaI	GTAC	2 cut(s)	135, 681
AfeI	AGCGCT	1 cut(s)	8
AflIII	ACRYGT	1 cut(s)	682
AgsI	TTSAA	8 cut(s)	22, 107, 166, 260, 314, 602, 869, 890
AjiI	CACGTC	1 cut(s)	413
AjnI	CCWGG	1 cut(s)	773
AloI	GAACNNNNNNTCC	2 cut(s)	143, 175
AluBI	AGCT	6 cut(s)	85, 242, 319, 402, 896, 905
AluI	AGCT	6 cut(s)	85, 242, 319, 402, 896, 905
Alw21I	GWGCWC	1 cut(s)	87
Alw26I	GTCTC	2 cut(s)	419, 983
AlwI	GGATC	3 cut(s)	599, 608, 957
Aor51HI	AGCGCT	1 cut(s)	8
AoxI	GGCC	2 cut(s)	219, 489
ApeKI	GCWGC	3 cut(s)	239, 766, 905
ApoI	RAATTY	5 cut(s)	40, 354, 420, 717, 800
AspLEI	GCGC	1 cut(s)	9
AspS9I	GGNCC	2 cut(s)	159, 508
AsuHPI	GGTGA	1 cut(s)	1010
AvaII	GGWCC	2 cut(s)	159, 508
BalI	TGGCCA	1 cut(s)	221
BanI	GGYRCC	1 cut(s)	914
BanII	GRGCYC	1 cut(s)	87
Bbv12I	GWGCWC	1 cut(s)	87
BbvI	GCAGC	3 cut(s)	251, 778, 892
BccI	CCATC	2 cut(s)	389, 524
BciT130I	CCWGG	1 cut(s)	775
BcoDI	GTCTC	2 cut(s)	419, 983
BfaI	CTAG	1 cut(s)	392
BfoI	RGCGCY	1 cut(s)	10
BfuAI	ACCTGC	1 cut(s)	828
BglII	AGATCT	1 cut(s)	367
BisI	GCNGC	3 cut(s)	240, 767, 906
BlpI	GCTNAGC	1 cut(s)	403
BlsI	GCNGC	3 cut(s)	241, 768, 907
Bme1390I	CCNGG	1 cut(s)	775
Bme18I	GGWCC	2 cut(s)	159, 508
BmgBI	CACGTC	1 cut(s)	413
BmgT120I	GGNCC	2 cut(s)	159, 508
BmiI	GGNNCC	1 cut(s)	916
BmrFI	CCNGG	1 cut(s)	775
BmrI	ACTGGG	1 cut(s)	947
BmsI	GCATC	3 cut(s)	178, 567, 958
BmuI	ACTGGG	1 cut(s)	947
BpmI	CTGGAG	2 cut(s)	264, 623
Bpu1102I	GCTNAGC	1 cut(s)	403
BsaJI	CCNNGG	2 cut(s)	690, 773
Bse118I	RCCGGY	1 cut(s)	487
Bse1I	ACTGG	3 cut(s)	63, 794, 942
Bse3DI	GCAATG	1 cut(s)	495
BseBI	CCWGG	1 cut(s)	775
BseDI	CCNNGG	2 cut(s)	690, 773
BseGI	GGATG	3 cut(s)	169, 550, 854
BseMI	GCAATG	1 cut(s)	495
BseMII	CTCAG	1 cut(s)	417
BseNI	ACTGG	3 cut(s)	63, 794, 942
BseRI	GAGGAG	1 cut(s)	261
BseXI	GCAGC	3 cut(s)	251, 778, 892
Bsh1236I	CGCG	1 cut(s)	684
BshFI	GGCC	2 cut(s)	221, 491
BshNI	GGYRCC	1 cut(s)	914
BsiHKAI	GWGCWC	1 cut(s)	87
BsiSI	CCGG	1 cut(s)	488
BsmAI	GTCTC	2 cut(s)	419, 983
BsmBI	CGTCTC	1 cut(s)	419
BsmI	GAATGC	1 cut(s)	457
BsnI	GGCC	2 cut(s)	221, 491
Bsp1286I	GDGCHC	1 cut(s)	87
Bsp1407I	TGTACA	1 cut(s)	133
Bsp143I	GATC	4 cut(s)	367, 604, 613, 949
Bsp1720I	GCTNAGC	1 cut(s)	403
Bsp19I	CCATGG	1 cut(s)	690
BspACI	CCGC	2 cut(s)	542, 643
BspANI	GGCC	2 cut(s)	221, 491
BspCNI	CTCAG	1 cut(s)	416
BspFNI	CGCG	1 cut(s)	684
BspLI	GGNNCC	1 cut(s)	916
BspMI	ACCTGC	1 cut(s)	828
BspPI	GGATC	3 cut(s)	599, 608, 957
BspT107I	GGYRCC	1 cut(s)	914
BsrDI	GCAATG	1 cut(s)	495
BsrFI	RCCGGY	1 cut(s)	487
BsrGI	TGTACA	1 cut(s)	133
BsrI	ACTGG	3 cut(s)	63, 794, 942
BssAI	RCCGGY	1 cut(s)	487
BssECI	CCNNGG	2 cut(s)	690, 773
BssMI	GATC	4 cut(s)	367, 604, 613, 949
BssT1I	CCWWGG	1 cut(s)	690
Bst2UI	CCWGG	1 cut(s)	775
Bst4CI	ACNGT	3 cut(s)	255, 478, 914
Bst6I	CTCTTC	1 cut(s)	864
BstAPI	GCANNNNNTGC	1 cut(s)	914
BstAUI	TGTACA	1 cut(s)	133
BstDEI	CTNAG	2 cut(s)	403, 650
BstDSI	CCRYGG	1 cut(s)	690
BstF5I	GGATG	3 cut(s)	169, 550, 854
BstFNI	CGCG	1 cut(s)	684
BstH2I	RGCGCY	1 cut(s)	10
BstHHI	GCGC	1 cut(s)	9
BstKTI	GATC	4 cut(s)	370, 607, 616, 952
BstMAI	GTCTC	2 cut(s)	419, 983
BstMBI	GATC	4 cut(s)	367, 604, 613, 949
BstMWI	GCNNNNNNNGC	3 cut(s)	497, 902, 914
BstNI	CCWGG	1 cut(s)	775
BstNSI	RCATGY	1 cut(s)	134
BstSCI	CCNGG	1 cut(s)	773
BstUI	CGCG	1 cut(s)	684
BstV1I	GCAGC	3 cut(s)	251, 778, 892
BstX2I	RGATCY	4 cut(s)	367, 604, 613, 949
BstXI	CCANNNNNNTGG	1 cut(s)	229
BstYI	RGATCY	4 cut(s)	367, 604, 613, 949
BsuRI	GGCC	2 cut(s)	221, 491
BtgI	CCRYGG	1 cut(s)	690
BtrI	CACGTC	1 cut(s)	413
BtsCI	GGATG	3 cut(s)	169, 550, 854
BtsI	GCAGTG	1 cut(s)	270
BtsIMutI	CAGTG	2 cut(s)	270, 292
BveI	ACCTGC	1 cut(s)	828
CfoI	GCGC	1 cut(s)	9
Cfr10I	RCCGGY	1 cut(s)	487
Cfr13I	GGNCC	2 cut(s)	159, 508
Csp6I	GTAC	2 cut(s)	134, 680
CspCI	CAANNNNNGTGG	4 cut(s)	58, 93, 907, 942
CviAII	CATG	6 cut(s)	131, 229, 555, 691, 805, 842
CviQI	GTAC	2 cut(s)	134, 680
DdeI	CTNAG	2 cut(s)	403, 650
DpnI	GATC	4 cut(s)	369, 606, 615, 951
DpnII	GATC	4 cut(s)	367, 604, 613, 949
DraI	TTTAAA	1 cut(s)	190
EaeI	YGGCCR	1 cut(s)	219
Eam1104I	CTCTTC	1 cut(s)	864
EarI	CTCTTC	1 cut(s)	864
Ecl136II	GAGCTC	1 cut(s)	85
Eco130I	CCWWGG	1 cut(s)	690
Eco24I	GRGCYC	1 cut(s)	87
Eco47I	GGWCC	2 cut(s)	159, 508
Eco47III	AGCGCT	1 cut(s)	8
Eco53kI	GAGCTC	1 cut(s)	85
Eco57I	CTGAAG	2 cut(s)	137, 610
EcoICRI	GAGCTC	1 cut(s)	85
EcoO109I	RGGNCCY	2 cut(s)	159, 508
EcoRI	GAATTC	1 cut(s)	800
EcoRII	CCWGG	1 cut(s)	773
EcoT14I	CCWWGG	1 cut(s)	690
EcoT38I	GRGCYC	1 cut(s)	87
ErhI	CCWWGG	1 cut(s)	690
Esp3I	CGTCTC	1 cut(s)	419
FaeI	CATG	6 cut(s)	134, 232, 558, 694, 808, 845
FatI	CATG	6 cut(s)	130, 228, 554, 690, 804, 841
FblI	GTMKAC	1 cut(s)	700
Fnu4HI	GCNGC	3 cut(s)	240, 767, 906
FokI	GGATG	3 cut(s)	156, 557, 841
FriOI	GRGCYC	1 cut(s)	87
Fsp4HI	GCNGC	3 cut(s)	240, 767, 906
FspBI	CTAG	1 cut(s)	392
GlaI	GCGC	1 cut(s)	8
GluI	GCNGC	3 cut(s)	240, 767, 906
GsuI	CTGGAG	2 cut(s)	264, 623
HaeII	RGCGCY	1 cut(s)	10
HaeIII	GGCC	2 cut(s)	221, 491
HapII	CCGG	1 cut(s)	488
HhaI	GCGC	1 cut(s)	9
Hin1II	CATG	6 cut(s)	134, 232, 558, 694, 808, 845
Hin6I	GCGC	1 cut(s)	7
HinP1I	GCGC	1 cut(s)	7
HincII	GTYRAC	1 cut(s)	204
HindII	GTYRAC	1 cut(s)	204
HinfI	GANTC	3 cut(s)	282, 330, 646
HpaI	GTTAAC	1 cut(s)	204
HpaII	CCGG	1 cut(s)	488
HphI	GGTGA	1 cut(s)	1010
Hpy166II	GTNNAC	3 cut(s)	204, 658, 701
Hpy188I	TCNGA	2 cut(s)	629, 783
Hpy188III	TCNNGA	9 cut(s)	327, 392, 516, 608, 671, 714, 755, 890, 953
Hpy8I	GTNNAC	3 cut(s)	204, 658, 701
HpyAV	CCTTC	1 cut(s)	16
HpyCH4III	ACNGT	3 cut(s)	255, 478, 914
HpyCH4IV	ACGT	1 cut(s)	412
HpyCH4V	TGCA	9 cut(s)	53, 239, 270, 352, 457, 500, 823, 908, 1013
HpyF10VI	GCNNNNNNNGC	3 cut(s)	497, 902, 914
HpyF3I	CTNAG	2 cut(s)	403, 650
HpySE526I	ACGT	1 cut(s)	412
Hsp92II	CATG	6 cut(s)	134, 232, 558, 694, 808, 845
HspAI	GCGC	1 cut(s)	7
KspAI	GTTAAC	1 cut(s)	204
Kzo9I	GATC	4 cut(s)	367, 604, 613, 949
LmnI	GCTCC	2 cut(s)	4, 82
Lsp1109I	GCAGC	3 cut(s)	251, 778, 892
LweI	GCATC	3 cut(s)	178, 567, 958
MaeI	CTAG	1 cut(s)	392
MaeII	ACGT	1 cut(s)	412
MaeIII	GTNAC	1 cut(s)	562
MalI	GATC	4 cut(s)	369, 606, 615, 951
MboI	GATC	4 cut(s)	367, 604, 613, 949
MboII	GAAGA	6 cut(s)	130, 547, 614, 623, 821, 881
MflI	RGATCY	4 cut(s)	367, 604, 613, 949
MhlI	GDGCHC	1 cut(s)	87
MlsI	TGGCCA	1 cut(s)	221
MluCI	AATT	8 cut(s)	40, 354, 374, 420, 717, 800, 885, 921
MluI	ACGCGT	1 cut(s)	682
MluNI	TGGCCA	1 cut(s)	221
MlyI	GAGTC	1 cut(s)	339
MmeI	TCCRAC	1 cut(s)	460
MnlI	CCTC	7 cut(s)	104, 132, 187, 239, 283, 289, 499
Mox20I	TGGCCA	1 cut(s)	221
MscI	TGGCCA	1 cut(s)	221
MseI	TTAA	4 cut(s)	63, 189, 203, 372
MslI	CAYNNNNRTG	1 cut(s)	227
Msp20I	TGGCCA	1 cut(s)	221
MspA1I	CMGCKG	3 cut(s)	242, 319, 643
MspI	CCGG	1 cut(s)	488
MspR9I	CCNGG	1 cut(s)	775
Mva1269I	GAATGC	1 cut(s)	457
MvaI	CCWGG	1 cut(s)	775
MvnI	CGCG	1 cut(s)	684
MwoI	GCNNNNNNNGC	3 cut(s)	497, 902, 914
NcoI	CCATGG	1 cut(s)	690
NdeII	GATC	4 cut(s)	367, 604, 613, 949
NlaIII	CATG	6 cut(s)	134, 232, 558, 694, 808, 845
NlaIV	GGNNCC	1 cut(s)	916
NmuCI	GTSAC	1 cut(s)	562
NspI	RCATGY	1 cut(s)	134
PctI	GAATGC	1 cut(s)	457
PfeI	GAWTC	2 cut(s)	282, 646
PkrI	GCNGC	3 cut(s)	241, 768, 907
PleI	GAGTC	1 cut(s)	338
PpsI	GAGTC	1 cut(s)	338
PpuMI	RGGWCCY	2 cut(s)	159, 508
Psp124BI	GAGCTC	1 cut(s)	87
Psp5II	RGGWCCY	2 cut(s)	159, 508
Psp6I	CCWGG	1 cut(s)	773
PspGI	CCWGG	1 cut(s)	773
PspN4I	GGNNCC	1 cut(s)	916
PspPI	GGNCC	2 cut(s)	159, 508
PspPPI	RGGWCCY	2 cut(s)	159, 508
PsuI	RGATCY	4 cut(s)	367, 604, 613, 949
PvuII	CAGCTG	2 cut(s)	242, 319
RsaI	GTAC	2 cut(s)	135, 681
RsaNI	GTAC	2 cut(s)	134, 680
RseI	CAYNNNNRTG	1 cut(s)	227
SacI	GAGCTC	1 cut(s)	87
SaqAI	TTAA	4 cut(s)	63, 189, 203, 372
SatI	GCNGC	3 cut(s)	240, 767, 906
Sau3AI	GATC	4 cut(s)	367, 604, 613, 949
Sau96I	GGNCC	2 cut(s)	159, 508
SchI	GAGTC	1 cut(s)	339
ScrFI	CCNGG	1 cut(s)	775
SduI	GDGCHC	1 cut(s)	87
SfaNI	GCATC	3 cut(s)	178, 567, 958
SinI	GGWCC	2 cut(s)	159, 508
SmiMI	CAYNNNNRTG	1 cut(s)	227
Sse9I	AATT	8 cut(s)	40, 354, 374, 420, 717, 800, 885, 921
SsiI	CCGC	2 cut(s)	542, 643
SspMI	CTAG	1 cut(s)	392
SstI	GAGCTC	1 cut(s)	87
StyD4I	CCNGG	1 cut(s)	773
StyI	CCWWGG	1 cut(s)	690
TaaI	ACNGT	3 cut(s)	255, 478, 914
TaiI	ACGT	1 cut(s)	415
TaqI	TCGA	2 cut(s)	715, 898
TasI	AATT	8 cut(s)	40, 354, 374, 420, 717, 800, 885, 921
TatI	WGTACW	1 cut(s)	133
TfiI	GAWTC	2 cut(s)	282, 646
Tru1I	TTAA	4 cut(s)	63, 189, 203, 372
Tru9I	TTAA	4 cut(s)	63, 189, 203, 372
TscAI	CASTG	2 cut(s)	277, 292
TseFI	GTSAC	1 cut(s)	562
TseI	GCWGC	3 cut(s)	239, 766, 905
Tsp45I	GTSAC	1 cut(s)	562
TspDTI	ATGAA	3 cut(s)	164, 793, 858
TspRI	CASTG	2 cut(s)	277, 292
VpaK11BI	GGWCC	2 cut(s)	159, 508
XapI	RAATTY	5 cut(s)	40, 354, 420, 717, 800
XbaI	TCTAGA	1 cut(s)	391
XceI	RCATGY	1 cut(s)	134
XmiI	GTMKAC	1 cut(s)	700
XspI	CTAG	1 cut(s)	392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.