Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0008952

Physical Location & Seq

Genomic Coordinates Reverse (-)

22845316 .. 22847543

Gene Structure 2228 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G223400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 990 bp

ATGGGTAGGCTCAATCCTATACTCGTTTGGTCGCTTTGCCTTAGTTTGTGCCTCTTTCTCTGTCCCACATCGGCGCAGCTAAAAACAAACTTCTATGCCAACGTCTGCCCCAACGTCGAAAACATTGTAAAAAATGTTGTCACTCAAAAATTTCAACAAACATTTGTCACAGTCCCAGCAACCATCCGTCTCTTTTTTCATGATTGCTTTGTCCAGGGTTGTGATGCTTCGGTTTTAGTTGCTTCCACTGGAAACAACAAAGCAGAGAAGGATCATCCAGATAATCTGTCATTAGCTGGAGATGGTTTTGATACAGTGATCAAAGCCAAAGCAGCAGTTGATGCAGTTCCTCAGTGCAAAAACAAAGTCTCTTGTGCTGATATTCTTGCCTTGGCCACCAGAGATGTCATTGTTCTGTCTGGTGGACCTTCGTATGCAGTTGAGTTGGGGAGATTGGACGGACTAAGTTCAAGTTCTAAAAATGTAGATGGGAACCTCCCCAAGCCAACCTTCAATTTGAACCAGCTCAATTCCATGTTTGCTGCCCATGGGTTGTCCCAGGCTGACATGGTCGCTCTTTCAGCGGCGCACACCGTTGGATTCTCTCATTGCGACAGGTTTTCCAATCGGATTTACAGCTTCAGCGCAGGGAACCCAGTGGACCCCAGTCTGAACAAAACGTATGCAACTCAACTCCAACAGATGTGTCCAAAAAATGTGGACCCCGACATAGCCATCAACATGGACCCAAACACGCCCAGAACCTTTGACAATGTCTATTTCAAGAATCTTGAACTTGGGCAAGGCCTTTTTACCTCAGACCAGGTCCTTTTCACGGACGCAAGATCTCAGCCCACGGTAAAAACCTGGGCCAAAGACAACGCTGCTTTTCAACAGGCTTTTATTACCGCGATGACCAAGCTGGGCCGGGTCGGAGTCAAGACCGGTAATAAAGGAAATATTCGTAGCGATTGTAGTGTTCTTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0044424 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

330

Amino Acids

35.59

Weight (kDa)

8.25

Isoelectric Point (pI)

26.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008952)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49960 AT4G37520 AT4G37520 AT4G37530 AT4G37530 AT5G67400
fragaria_vesca	FvH4_1g17340
malus_domestica	MD00G1112500.v1.1 MD15G1294200.v1.1
prunus_persica	Prupe.6G223400_v2.0.a1
pyrus_communis	pycom02g14820 pycom15g25710
rosa_chinensis	RchiOBHm_Chr2g0107511
rosa_laevigata	RLG00000017587
rosa_multiflora	Rmu_sc0022315.1_g000001
rosa_roxburghii	Rroxscaffold_2G00136230
rosa_rugosa	Rorug02G0144500
rosa_samantha	Rh2AG194400 Rh2BG207100 Rh2CG199600 Rh2DG201700
rosa_wichuraiana	Rw2G015400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	911
AciI	CCGC	2 cut(s)	584, 909
AclWI	GGATC	1 cut(s)	279
AcoI	YGGCCR	1 cut(s)	393
AcsI	RAATTY	1 cut(s)	149
AcuI	CTGAAG	1 cut(s)	625
AfiI	CCNNNNNNNGG	1 cut(s)	835
AgeI	ACCGGT	1 cut(s)	944
AgsI	TTSAA	7 cut(s)	155, 471, 514, 520, 784, 794, 893
AjnI	CCWGG	4 cut(s)	213, 558, 822, 866
AjuI	GAANNNNNNNTTGG	2 cut(s)	494, 526
AluBI	AGCT	5 cut(s)	79, 296, 526, 639, 922
AluI	AGCT	5 cut(s)	79, 296, 526, 639, 922
Alw26I	GTCTC	2 cut(s)	194, 373
AlwI	GGATC	1 cut(s)	279
AoxI	GGCC	4 cut(s)	393, 805, 870, 925
ApeKI	GCWGC	4 cut(s)	76, 332, 542, 884
ApoI	RAATTY	1 cut(s)	149
ArsI	GACNNNNNNTTYG	2 cut(s)	351, 383
AsiGI	ACCGGT	1 cut(s)	944
AspLEI	GCGC	3 cut(s)	76, 589, 647
AspS9I	GGNCC	7 cut(s)	425, 661, 721, 745, 826, 870, 925
AsuC2I	CCSGG	1 cut(s)	929
AvaII	GGWCC	5 cut(s)	425, 661, 721, 745, 826
BalI	TGGCCA	1 cut(s)	395
BbvI	GCAGC	4 cut(s)	88, 344, 529, 871
BccI	CCATC	4 cut(s)	191, 296, 482, 743
BciT130I	CCWGG	4 cut(s)	215, 560, 824, 868
BclI	TGATCA	1 cut(s)	318
BcnI	CCSGG	1 cut(s)	929
BcoDI	GTCTC	2 cut(s)	194, 373
BglII	AGATCT	1 cut(s)	845
BisI	GCNGC	5 cut(s)	77, 333, 543, 585, 885
BlsI	GCNGC	5 cut(s)	78, 334, 544, 586, 886
Bme1390I	CCNGG	5 cut(s)	215, 560, 824, 868, 929
Bme18I	GGWCC	5 cut(s)	425, 661, 721, 745, 826
BmgT120I	GGNCC	7 cut(s)	425, 661, 721, 745, 826, 870, 925
BmiI	GGNNCC	5 cut(s)	494, 653, 663, 723, 747
BmrFI	CCNGG	5 cut(s)	215, 560, 824, 868, 929
BmrI	ACTGGG	2 cut(s)	650, 660
BmsI	GCATC	2 cut(s)	214, 331
BmuI	ACTGGG	2 cut(s)	650, 660
BoxI	GACNNNNGTC	1 cut(s)	666
BpmI	CTGGAG	1 cut(s)	318
BpuMI	CCSGG	1 cut(s)	929
BsaJI	CCNNGG	6 cut(s)	214, 390, 547, 558, 855, 867
BsaWI	WCCGGW	1 cut(s)	944
Bsc4I	CCNNNNNNNGG	1 cut(s)	835
Bse118I	RCCGGY	1 cut(s)	944
Bse1I	ACTGG	3 cut(s)	253, 656, 666
Bse3DI	GCAATG	1 cut(s)	607
BseBI	CCWGG	4 cut(s)	215, 560, 824, 868
BseDI	CCNNGG	6 cut(s)	214, 390, 547, 558, 855, 867
BseGI	GGATG	2 cut(s)	183, 274
BseLI	CCNNNNNNNGG	1 cut(s)	835
BseMI	GCAATG	1 cut(s)	607
BseMII	CTCAG	3 cut(s)	365, 831, 863
BseNI	ACTGG	3 cut(s)	253, 656, 666
BseXI	GCAGC	4 cut(s)	88, 344, 529, 871
BseYI	CCCAGC	2 cut(s)	175, 922
Bsh1236I	CGCG	1 cut(s)	911
BshFI	GGCC	4 cut(s)	395, 807, 872, 927
BshTI	ACCGGT	1 cut(s)	944
BsiSI	CCGG	2 cut(s)	928, 945
BslFI	GGGAC	3 cut(s)	48, 158, 541
BslI	CCNNNNNNNGG	1 cut(s)	835
BsmAI	GTCTC	2 cut(s)	194, 373
BsmBI	CGTCTC	1 cut(s)	194
BsmFI	GGGAC	3 cut(s)	48, 158, 541
BsnI	GGCC	4 cut(s)	395, 807, 872, 927
Bsp143I	GATC	3 cut(s)	271, 318, 845
Bsp19I	CCATGG	1 cut(s)	547
BspACI	CCGC	2 cut(s)	584, 909
BspANI	GGCC	4 cut(s)	395, 807, 872, 927
BspCNI	CTCAG	3 cut(s)	364, 830, 862
BspFNI	CGCG	1 cut(s)	911
BspHI	TCATGA	1 cut(s)	199
BspLI	GGNNCC	5 cut(s)	494, 653, 663, 723, 747
BspPI	GGATC	1 cut(s)	279
BsrDI	GCAATG	1 cut(s)	607
BsrFI	RCCGGY	1 cut(s)	944
BsrI	ACTGG	3 cut(s)	253, 656, 666
BssAI	RCCGGY	1 cut(s)	944
BssECI	CCNNGG	6 cut(s)	214, 390, 547, 558, 855, 867
BssMI	GATC	3 cut(s)	271, 318, 845
BssT1I	CCWWGG	2 cut(s)	390, 547
Bst2UI	CCWGG	4 cut(s)	215, 560, 824, 868
Bst4CI	ACNGT	4 cut(s)	172, 316, 595, 859
BstAPI	GCANNNNNTGC	1 cut(s)	341
BstDEI	CTNAG	5 cut(s)	41, 351, 464, 817, 849
BstDSI	CCRYGG	2 cut(s)	547, 855
BstF5I	GGATG	2 cut(s)	183, 274
BstFNI	CGCG	1 cut(s)	911
BstHHI	GCGC	3 cut(s)	76, 589, 647
BstKTI	GATC	3 cut(s)	274, 321, 848
BstMAI	GTCTC	2 cut(s)	194, 373
BstMBI	GATC	3 cut(s)	271, 318, 845
BstMWI	GCNNNNNNNGC	3 cut(s)	332, 341, 581
BstNI	CCWGG	4 cut(s)	215, 560, 824, 868
BstPAI	GACNNNNGTC	1 cut(s)	666
BstSCI	CCNGG	5 cut(s)	213, 558, 822, 866, 927
BstUI	CGCG	1 cut(s)	911
BstV1I	GCAGC	4 cut(s)	88, 344, 529, 871
BstX2I	RGATCY	1 cut(s)	845
BstXI	CCANNNNNNTGG	1 cut(s)	742
BstYI	RGATCY	1 cut(s)	845
BsuRI	GGCC	4 cut(s)	395, 807, 872, 927
BtgI	CCRYGG	2 cut(s)	547, 855
BtgZI	GCGATG	1 cut(s)	926
BtsCI	GGATG	2 cut(s)	183, 274
BtsIMutI	CAGTG	4 cut(s)	246, 321, 359, 663
CciI	TCATGA	1 cut(s)	199
CfoI	GCGC	3 cut(s)	76, 589, 647
Cfr10I	RCCGGY	1 cut(s)	944
Cfr13I	GGNCC	7 cut(s)	425, 661, 721, 745, 826, 870, 925
CseI	GACGC	1 cut(s)	848
CsiI	ACCWGGT	1 cut(s)	822
CspAI	ACCGGT	1 cut(s)	944
CspCI	CAANNNNNGTGG	2 cut(s)	699, 734
CviAII	CATG	5 cut(s)	200, 535, 548, 568, 742
DdeI	CTNAG	5 cut(s)	41, 351, 464, 817, 849
DpnI	GATC	3 cut(s)	273, 320, 847
DpnII	GATC	3 cut(s)	271, 318, 845
EaeI	YGGCCR	1 cut(s)	393
Eco130I	CCWWGG	2 cut(s)	390, 547
Eco147I	AGGCCT	1 cut(s)	807
Eco47I	GGWCC	5 cut(s)	425, 661, 721, 745, 826
Eco57I	CTGAAG	1 cut(s)	625
EcoO109I	RGGNCCY	1 cut(s)	826
EcoRII	CCWGG	4 cut(s)	213, 558, 822, 866
EcoT14I	CCWWGG	2 cut(s)	390, 547
ErhI	CCWWGG	2 cut(s)	390, 547
Esp3I	CGTCTC	1 cut(s)	194
FaeI	CATG	5 cut(s)	203, 538, 551, 571, 745
FalI	AAGNNNNNCTT	2 cut(s)	494, 526
FaqI	GGGAC	3 cut(s)	48, 158, 541
FatI	CATG	5 cut(s)	199, 534, 547, 567, 741
FbaI	TGATCA	1 cut(s)	318
Fnu4HI	GCNGC	5 cut(s)	77, 333, 543, 585, 885
FokI	GGATG	2 cut(s)	170, 261
Fsp4HI	GCNGC	5 cut(s)	77, 333, 543, 585, 885
GlaI	GCGC	3 cut(s)	75, 588, 646
GluI	GCNGC	5 cut(s)	77, 333, 543, 585, 885
GsaI	CCCAGC	2 cut(s)	179, 926
GsuI	CTGGAG	1 cut(s)	318
HaeIII	GGCC	4 cut(s)	395, 807, 872, 927
HapII	CCGG	2 cut(s)	928, 945
HgaI	GACGC	1 cut(s)	848
HhaI	GCGC	3 cut(s)	76, 589, 647
Hin1II	CATG	5 cut(s)	203, 538, 551, 571, 745
Hin6I	GCGC	3 cut(s)	74, 587, 645
HinP1I	GCGC	3 cut(s)	74, 587, 645
HinfI	GANTC	3 cut(s)	600, 787, 936
HpaII	CCGG	2 cut(s)	928, 945
Hpy166II	GTNNAC	3 cut(s)	425, 661, 721
Hpy188I	TCNGA	4 cut(s)	630, 672, 820, 935
Hpy188III	TCNNGA	5 cut(s)	200, 278, 784, 791, 940
Hpy8I	GTNNAC	3 cut(s)	425, 661, 721
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	3 cut(s)	262, 438, 520
HpyCH4III	ACNGT	4 cut(s)	172, 316, 595, 859
HpyCH4IV	ACGT	3 cut(s)	102, 114, 680
HpyCH4V	TGCA	4 cut(s)	344, 357, 437, 686
HpyF10VI	GCNNNNNNNGC	3 cut(s)	332, 341, 581
HpyF3I	CTNAG	5 cut(s)	41, 351, 464, 817, 849
HpySE526I	ACGT	3 cut(s)	102, 114, 680
Hsp92II	CATG	5 cut(s)	203, 538, 551, 571, 745
HspAI	GCGC	3 cut(s)	74, 587, 645
Ksp22I	TGATCA	1 cut(s)	318
Kzo9I	GATC	3 cut(s)	271, 318, 845
Lsp1109I	GCAGC	4 cut(s)	88, 344, 529, 871
LweI	GCATC	2 cut(s)	214, 331
MabI	ACCWGGT	1 cut(s)	822
MaeII	ACGT	3 cut(s)	102, 114, 680
MaeIII	GTNAC	2 cut(s)	139, 166
MalI	GATC	3 cut(s)	273, 320, 847
MboI	GATC	3 cut(s)	271, 318, 845
MflI	RGATCY	1 cut(s)	845
MlsI	TGGCCA	1 cut(s)	395
MluCI	AATT	3 cut(s)	149, 514, 529
MluNI	TGGCCA	1 cut(s)	395
MlyI	GAGTC	1 cut(s)	945
MmeI	TCCRAC	3 cut(s)	577, 721, 913
MnlI	CCTC	4 cut(s)	62, 360, 506, 826
Mox20I	TGGCCA	1 cut(s)	395
MscI	TGGCCA	1 cut(s)	395
MseI	TTAA	1 cut(s)	984
MslI	CAYNNNNRTG	1 cut(s)	740
Msp20I	TGGCCA	1 cut(s)	395
MspA1I	CMGCKG	1 cut(s)	584
MspI	CCGG	2 cut(s)	928, 945
MspR9I	CCNGG	5 cut(s)	215, 560, 824, 868, 929
MvaI	CCWGG	4 cut(s)	215, 560, 824, 868
MvnI	CGCG	1 cut(s)	911
MwoI	GCNNNNNNNGC	3 cut(s)	332, 341, 581
NciI	CCSGG	1 cut(s)	929
NcoI	CCATGG	1 cut(s)	547
NdeII	GATC	3 cut(s)	271, 318, 845
NlaIII	CATG	5 cut(s)	203, 538, 551, 571, 745
NlaIV	GGNNCC	5 cut(s)	494, 653, 663, 723, 747
NmuCI	GTSAC	2 cut(s)	139, 166
PagI	TCATGA	1 cut(s)	199
PceI	AGGCCT	1 cut(s)	807
PfeI	GAWTC	2 cut(s)	600, 787
PflFI	GACNNNGTC	3 cut(s)	569, 773, 824
PinAI	ACCGGT	1 cut(s)	944
PkrI	GCNGC	5 cut(s)	78, 334, 544, 586, 886
PleI	GAGTC	1 cut(s)	944
PpsI	GAGTC	1 cut(s)	944
PpuMI	RGGWCCY	1 cut(s)	826
PshAI	GACNNNNGTC	1 cut(s)	666
Psp5II	RGGWCCY	1 cut(s)	826
Psp6I	CCWGG	4 cut(s)	213, 558, 822, 866
PspFI	CCCAGC	2 cut(s)	175, 922
PspGI	CCWGG	4 cut(s)	213, 558, 822, 866
PspN4I	GGNNCC	5 cut(s)	494, 653, 663, 723, 747
PspPI	GGNCC	7 cut(s)	425, 661, 721, 745, 826, 870, 925
PspPPI	RGGWCCY	1 cut(s)	826
PsuI	RGATCY	1 cut(s)	845
PsyI	GACNNNGTC	3 cut(s)	569, 773, 824
RseI	CAYNNNNRTG	1 cut(s)	740
SaqAI	TTAA	1 cut(s)	984
SatI	GCNGC	5 cut(s)	77, 333, 543, 585, 885
Sau3AI	GATC	3 cut(s)	271, 318, 845
Sau96I	GGNCC	7 cut(s)	425, 661, 721, 745, 826, 870, 925
SchI	GAGTC	1 cut(s)	945
ScrFI	CCNGG	5 cut(s)	215, 560, 824, 868, 929
SexAI	ACCWGGT	1 cut(s)	822
SfaNI	GCATC	2 cut(s)	214, 331
SinI	GGWCC	5 cut(s)	425, 661, 721, 745, 826
SmiMI	CAYNNNNRTG	1 cut(s)	740
Sse9I	AATT	3 cut(s)	149, 514, 529
SseBI	AGGCCT	1 cut(s)	807
SsiI	CCGC	2 cut(s)	584, 909
SspI	AATATT	1 cut(s)	961
StuI	AGGCCT	1 cut(s)	807
StyD4I	CCNGG	5 cut(s)	213, 558, 822, 866, 927
StyI	CCWWGG	2 cut(s)	390, 547
TaaI	ACNGT	4 cut(s)	172, 316, 595, 859
TaiI	ACGT	3 cut(s)	105, 117, 683
TaqI	TCGA	1 cut(s)	117
TasI	AATT	3 cut(s)	149, 514, 529
TauI	GCSGC	1 cut(s)	587
TfiI	GAWTC	2 cut(s)	600, 787
Tru1I	TTAA	1 cut(s)	984
Tru9I	TTAA	1 cut(s)	984
TscAI	CASTG	4 cut(s)	253, 321, 359, 663
TseFI	GTSAC	2 cut(s)	139, 166
TseI	GCWGC	4 cut(s)	76, 332, 542, 884
Tsp45I	GTSAC	2 cut(s)	139, 166
TspDTI	ATGAA	1 cut(s)	188
TspGWI	ACGGA	3 cut(s)	176, 474, 851
TspRI	CASTG	4 cut(s)	253, 321, 359, 663
Tth111I	GACNNNGTC	3 cut(s)	569, 773, 824
VpaK11BI	GGWCC	5 cut(s)	425, 661, 721, 745, 826
XapI	RAATTY	1 cut(s)	149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.