Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0014759

Physical Location & Seq

Genomic Coordinates Reverse (-)

25415641 .. 25416299

Gene Structure 659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G265500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 450 bp

ATGTCTAACCAAGATGACATGGCTGGCATGCCTGGCATGTCTATGACTCCCCCTGCGCCCAAGGGCGACCTGAAGAACACAACTGATGGTGCCATGAGCTCTAGCCTCACATGGACCACAGACGTCACCGTCCTCTTCCGTGGTTGGCCTGATGACAGCGTTCCCATGTACGTCTTGGCCCTCTTCTTCGTCTTCCTCCTCGCTGTTGCCGTTGAAGTCTTGTCTGTTTCGCCCAAACACAAACCAGGCACCAAGACTTTCATATGCACCCTCACTCAGACAGGCGTCTACACTTTTCGCACAGCTTTGGCTTACTTGGTCATGCTCGCTGTCATGTCGTTCAATACTGGTATCCTGATAGCCGCCGTGGCCGGCCATGCCCTCGGCTTCTTCATCATCAAGGTTCGTTCTCATGGCCTCCAACCCAACGTAGCCGACCCCAAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000041 GO:0003006 GO:0003674 GO:0005215 GO:0005375 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006825 GO:0007275 GO:0007276 GO:0008150 GO:0008324 GO:0009555 GO:0009987 GO:0015075 GO:0015318 GO:0016020 GO:0019953 GO:0022412 GO:0022414 GO:0022622 GO:0022857 GO:0022890 GO:0030001 GO:0030154 GO:0032501 GO:0032502 GO:0032504 GO:0034220 GO:0035434 GO:0044703 GO:0046873 GO:0046915 GO:0048229 GO:0048232 GO:0048235 GO:0048364 GO:0048609 GO:0048731 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055046 GO:0055085 GO:0098655 GO:0098660 GO:0098662 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko01524 ko04978 map01524 map04978

Pfam Domains

Protein Families

Ctr

Protein Analysis

150

Amino Acids

15.99

Weight (kDa)

7.89

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014759)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g12630
malus_domestica	MD04G1140400.v1.1 MD07G1250000.v1.1 MD10G1019100.v1.1 MD12G1155800.v1.1
prunus_persica	Prupe.6G265500_v2.0.a1
pyrus_communis	pycom04g12800 pycom12g14780
rosa_chinensis	RchiOBHm_Chr3g0464481
rosa_laevigata	RLG00000024693
rosa_multiflora	Rmu_sc0003074.1_g000007
rosa_roxburghii	Rroxscaffold_6G00415630
rosa_rugosa	Rorug03G0072500
rosa_samantha	Rh3BG134700 Rh3CG137200 Rh3DG136000
rosa_wichuraiana	Rw3G011010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	128
AatII	GACGTC	1 cut(s)	126
AccB1I	GGYRCC	2 cut(s)	89, 248
AccI	GTMKAC	1 cut(s)	288
AciI	CCGC	1 cut(s)	363
AcoI	YGGCCR	2 cut(s)	369, 373
AcuI	CTGAAG	1 cut(s)	92
AcyI	GRCGYC	2 cut(s)	123, 285
AfaI	GTAC	1 cut(s)	170
AgsI	TTSAA	2 cut(s)	215, 343
AjnI	CCWGG	2 cut(s)	31, 244
AluBI	AGCT	2 cut(s)	99, 305
AluI	AGCT	2 cut(s)	99, 305
Alw21I	GWGCWC	1 cut(s)	101
AoxI	GGCC	5 cut(s)	146, 177, 369, 373, 415
AspLEI	GCGC	1 cut(s)	58
AspS9I	GGNCC	2 cut(s)	114, 178
AsuHPI	GGTGA	1 cut(s)	118
AvaII	GGWCC	1 cut(s)	114
BanI	GGYRCC	2 cut(s)	89, 248
BanII	GRGCYC	1 cut(s)	101
BbsI	GAAGAC	1 cut(s)	184
Bbv12I	GWGCWC	1 cut(s)	101
BccI	CCATC	1 cut(s)	80
BceAI	ACGGC	2 cut(s)	194, 350
BciT130I	CCWGG	2 cut(s)	33, 246
BciVI	GTATCC	1 cut(s)	362
BfaI	CTAG	1 cut(s)	102
BfuI	GTATCC	1 cut(s)	362
BglI	GCCNNNNNGGC	1 cut(s)	368
BisI	GCNGC	1 cut(s)	363
BlsI	GCNGC	1 cut(s)	364
Bme1390I	CCNGG	2 cut(s)	33, 246
Bme18I	GGWCC	1 cut(s)	114
BmgT120I	GGNCC	2 cut(s)	114, 178
BmiI	GGNNCC	2 cut(s)	91, 250
BmrFI	CCNGG	2 cut(s)	33, 246
BoxI	GACNNNNGTC	1 cut(s)	284
BpiI	GAAGAC	1 cut(s)	184
BsaHI	GRCGYC	2 cut(s)	123, 285
BsaJI	CCNNGG	4 cut(s)	60, 139, 366, 382
Bse118I	RCCGGY	1 cut(s)	371
Bse1I	ACTGG	1 cut(s)	352
BseBI	CCWGG	2 cut(s)	33, 246
BseDI	CCNNGG	4 cut(s)	60, 139, 366, 382
BseMII	CTCAG	1 cut(s)	290
BseNI	ACTGG	1 cut(s)	352
BseRI	GAGGAG	1 cut(s)	188
BshFI	GGCC	5 cut(s)	148, 179, 371, 375, 417
BshNI	GGYRCC	2 cut(s)	89, 248
BsiHKAI	GWGCWC	1 cut(s)	101
BsiSI	CCGG	1 cut(s)	372
BsnI	GGCC	5 cut(s)	148, 179, 371, 375, 417
Bsp1286I	GDGCHC	1 cut(s)	101
BspACI	CCGC	1 cut(s)	363
BspANI	GGCC	5 cut(s)	148, 179, 371, 375, 417
BspCNI	CTCAG	1 cut(s)	289
BspLI	GGNNCC	2 cut(s)	91, 250
BspT107I	GGYRCC	2 cut(s)	89, 248
BsrFI	RCCGGY	1 cut(s)	371
BsrI	ACTGG	1 cut(s)	352
BssAI	RCCGGY	1 cut(s)	371
BssECI	CCNNGG	4 cut(s)	60, 139, 366, 382
BssNI	GRCGYC	2 cut(s)	123, 285
BssT1I	CCWWGG	1 cut(s)	60
Bst2UI	CCWGG	2 cut(s)	33, 246
Bst4CI	ACNGT	1 cut(s)	130
Bst6I	CTCTTC	2 cut(s)	140, 188
BstACI	GRCGYC	2 cut(s)	123, 285
BstC8I	GCNNGC	4 cut(s)	25, 29, 327, 373
BstDEI	CTNAG	1 cut(s)	276
BstDSI	CCRYGG	2 cut(s)	139, 366
BstHHI	GCGC	1 cut(s)	58
BstMWI	GCNNNNNNNGC	3 cut(s)	33, 368, 377
BstNI	CCWGG	2 cut(s)	33, 246
BstNSI	RCATGY	2 cut(s)	31, 40
BstPAI	GACNNNNGTC	1 cut(s)	284
BstSCI	CCNGG	2 cut(s)	31, 244
BstV2I	GAAGAC	1 cut(s)	184
BsuI	GTATCC	1 cut(s)	362
BsuRI	GGCC	5 cut(s)	148, 179, 371, 375, 417
BtgI	CCRYGG	2 cut(s)	139, 366
Cac8I	GCNNGC	4 cut(s)	25, 29, 327, 373
CfoI	GCGC	1 cut(s)	58
Cfr10I	RCCGGY	1 cut(s)	371
Cfr13I	GGNCC	2 cut(s)	114, 178
CseI	GACGC	1 cut(s)	274
Csp6I	GTAC	1 cut(s)	169
CviQI	GTAC	1 cut(s)	169
DdeI	CTNAG	1 cut(s)	276
DrdI	GACNNNNNNGTC	1 cut(s)	128
DseDI	GACNNNNNNGTC	1 cut(s)	128
EaeI	YGGCCR	2 cut(s)	369, 373
Eam1104I	CTCTTC	2 cut(s)	140, 188
EarI	CTCTTC	2 cut(s)	140, 188
Ecl136II	GAGCTC	1 cut(s)	99
Eco130I	CCWWGG	1 cut(s)	60
Eco24I	GRGCYC	1 cut(s)	101
Eco47I	GGWCC	1 cut(s)	114
Eco53kI	GAGCTC	1 cut(s)	99
Eco57I	CTGAAG	1 cut(s)	92
EcoICRI	GAGCTC	1 cut(s)	99
EcoRII	CCWGG	2 cut(s)	31, 244
EcoT14I	CCWWGG	1 cut(s)	60
EcoT38I	GRGCYC	1 cut(s)	101
ErhI	CCWWGG	1 cut(s)	60
FauNDI	CATATG	1 cut(s)	263
FblI	GTMKAC	1 cut(s)	288
Fnu4HI	GCNGC	1 cut(s)	363
FriOI	GRGCYC	1 cut(s)	101
FseI	GGCCGGCC	1 cut(s)	375
Fsp4HI	GCNGC	1 cut(s)	363
FspBI	CTAG	1 cut(s)	102
GlaI	GCGC	1 cut(s)	57
GluI	GCNGC	1 cut(s)	363
HaeIII	GGCC	5 cut(s)	148, 179, 371, 375, 417
HapII	CCGG	1 cut(s)	372
HgaI	GACGC	1 cut(s)	274
HhaI	GCGC	1 cut(s)	58
Hin1I	GRCGYC	2 cut(s)	123, 285
Hin6I	GCGC	1 cut(s)	56
HinP1I	GCGC	1 cut(s)	56
HinfI	GANTC	1 cut(s)	46
HpaII	CCGG	1 cut(s)	372
HphI	GGTGA	1 cut(s)	118
Hpy166II	GTNNAC	1 cut(s)	289
Hpy188I	TCNGA	1 cut(s)	279
Hpy188III	TCNNGA	1 cut(s)	355
Hpy8I	GTNNAC	1 cut(s)	289
HpyCH4III	ACNGT	1 cut(s)	130
HpyCH4IV	ACGT	3 cut(s)	123, 171, 429
HpyCH4V	TGCA	1 cut(s)	267
HpyF10VI	GCNNNNNNNGC	3 cut(s)	33, 368, 377
HpyF3I	CTNAG	1 cut(s)	276
HpySE526I	ACGT	3 cut(s)	123, 171, 429
Hsp92I	GRCGYC	2 cut(s)	123, 285
HspAI	GCGC	1 cut(s)	56
KroI	GCCGGC	1 cut(s)	371
KroNI	GCCGGC	1 cut(s)	373
MaeI	CTAG	1 cut(s)	102
MaeII	ACGT	3 cut(s)	123, 171, 429
MaeIII	GTNAC	1 cut(s)	124
MboII	GAAGA	6 cut(s)	85, 127, 175, 178, 184, 382
MhlI	GDGCHC	1 cut(s)	101
MlyI	GAGTC	1 cut(s)	40
MmeI	TCCRAC	1 cut(s)	445
MnlI	CCTC	8 cut(s)	116, 143, 191, 206, 209, 281, 392, 428
MroNI	GCCGGC	1 cut(s)	371
MslI	CAYNNNNRTG	1 cut(s)	41
MspI	CCGG	1 cut(s)	372
MspR9I	CCNGG	2 cut(s)	33, 246
MvaI	CCWGG	2 cut(s)	33, 246
MwoI	GCNNNNNNNGC	3 cut(s)	33, 368, 377
NaeI	GCCGGC	1 cut(s)	373
NdeI	CATATG	1 cut(s)	263
NgoMIV	GCCGGC	1 cut(s)	371
NlaIV	GGNNCC	2 cut(s)	91, 250
NmeAIII	GCCGAG	1 cut(s)	363
NmuCI	GTSAC	1 cut(s)	124
NspI	RCATGY	2 cut(s)	31, 40
PaeI	GCATGC	1 cut(s)	31
PcsI	WCGNNNNNNNCGW	1 cut(s)	207
PdiI	GCCGGC	1 cut(s)	373
PkrI	GCNGC	1 cut(s)	364
PleI	GAGTC	1 cut(s)	40
PpsI	GAGTC	1 cut(s)	40
PshAI	GACNNNNGTC	1 cut(s)	284
Psp124BI	GAGCTC	1 cut(s)	101
Psp6I	CCWGG	2 cut(s)	31, 244
PspGI	CCWGG	2 cut(s)	31, 244
PspN4I	GGNNCC	2 cut(s)	91, 250
PspPI	GGNCC	2 cut(s)	114, 178
RigI	GGCCGGCC	1 cut(s)	375
RsaI	GTAC	1 cut(s)	170
RsaNI	GTAC	1 cut(s)	169
RseI	CAYNNNNRTG	1 cut(s)	41
SacI	GAGCTC	1 cut(s)	101
SatI	GCNGC	1 cut(s)	363
Sau96I	GGNCC	2 cut(s)	114, 178
SchI	GAGTC	1 cut(s)	40
ScrFI	CCNGG	2 cut(s)	33, 246
SduI	GDGCHC	1 cut(s)	101
SetI	ASST	7 cut(s)	72, 101, 126, 174, 307, 405, 432
SinI	GGWCC	1 cut(s)	114
SmiMI	CAYNNNNRTG	1 cut(s)	41
SphI	GCATGC	1 cut(s)	31
SsiI	CCGC	1 cut(s)	363
SspMI	CTAG	1 cut(s)	102
SstI	GAGCTC	1 cut(s)	101
StyD4I	CCNGG	2 cut(s)	31, 244
StyI	CCWWGG	1 cut(s)	60
TaaI	ACNGT	1 cut(s)	130
TaiI	ACGT	3 cut(s)	126, 174, 432
TauI	GCSGC	1 cut(s)	365
TseFI	GTSAC	1 cut(s)	124
Tsp45I	GTSAC	1 cut(s)	124
TspDTI	ATGAA	2 cut(s)	250, 382
TspGWI	ACGGA	1 cut(s)	128
VpaK11BI	GGWCC	1 cut(s)	114
XceI	RCATGY	2 cut(s)	31, 40
XcmI	CCANNNNNNNNNTGG	1 cut(s)	172
XmiI	GTMKAC	1 cut(s)	288
XspI	CTAG	1 cut(s)	102
ZraI	GACGTC	1 cut(s)	124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.