Prupe.6G267600_v2.0.a1
MYB Family

Transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
25545760 .. 25548576
2817 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G267600.1

Sequence Viewer

Length: 1194 bp
ATGGAGAGGGAAATGGAGACAGCCTACGACGCCGCCCCCGCAGCCGTCGAAGTCGACGCCGAAGACGGCGGAGATAGCGGTGAAGAGGCGACGCAAGCGGTGGCGGGAGGCGGAGGCGAAAGTCATAGAAAATCGGGCCGAGACAGAGTGAAGGGGCCTTGGTCTCCGGAAGAAGACTCGATACTTAGTCGGCTAGTGAGTAAGTTCGGCGCGAGGAATTGGAGCTTGATCGCCCGAGGAATCGACGGACGATCCGGCAAGTCTTGCCGCCTCCGATGGTGTAATCAGCTCGACCCCTCCGTTAAGCGCAAGCCCTTTACTGATGAGGAGGATCAGATGATAATTGCAGCTCATGCATTCCACGGAAACAAATGGGCTGCAATTGCGAGGCTTCTACCAGGGAGGACAGATAACGCCATAAAAAACCATTGGAATTCCACACTAAGGCGCCGGTGCATGGACCCTGACAAAATAAAGTTAGAATCTGGTAATACGGTTGAAGATGTGAGCTTAGACAAAACAAAAGCATCATCTGAAGAGACCTTCTCATATGGGGATGTCAATTCATCTAAATCTATGGAAGGAAGAGAAGTCAGTTCTTTAGAGCATATGGATTGTCAATACGAAGACAAGGGGTCAACGGAGGGTCAGTTTAGTCATGAAGTCAAGGAACAGCCAACTGTTTGTAGACCAGCGGCATGCATCAGTGCTTTTAGTGTGTATAACCATTCAGATAGCCAGGAGACTGGAGTATCATTCCCAAGGCTAATTCCAGTGCAAGGACCTCTGGTTCAAGTATCAAAACTTGATGTCAACATCAGTAAATTGCTTGATGGAGTTTATGGTGAGCGGTCAATACCTGATCAGTGTGGACACGGTTGCTGTTGTGCCAATGGTATGAATGCTCAAAACTCTTTGTTGGGGCCAGAATTTGTAGACTTCTCCGAGCCTCCCTCATTTCCAAGTTTTGAATTGGCTGCAATCGCCACAGATATAAGTAACCTTGCTTGGATTAAAAGTGGTTTGGAGAACAGCAGTGTAAGAGCAATGGGTGATGCAGCTGATAGAACAGTACCCCATGAGTCTCAAGGGCAAATGGGGCATTTTGAGGAGAGCAGAATGAATAATCTTTTCCGTTTTGAAGAGAGAAATGATAGGCTAATGGGAATGAAGACCAATGTGCTATCAACCTAA

Protein Analysis

398

Amino Acids

43.6

Weight (kDa)

5.17

Isoelectric Point (pI)

40.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011822)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 447
AccBSI CCGCTC 1 cut(s) 850
AccI GTMKAC 3 cut(s) 54, 688, 936
AccII CGCG 1 cut(s) 212
AccIII TCCGGA 1 cut(s) 166
AclWI GGATC 2 cut(s) 246, 339
AcsI RAATTY 2 cut(s) 433, 929
AcuI CTGAAG 1 cut(s) 555
AcyI GRCGYC 3 cut(s) 30, 57, 448
AfaI GTAC 1 cut(s) 1074
AfiI CCNNNNNNNGG 3 cut(s) 444, 457, 779
AgsI TTSAA 4 cut(s) 500, 794, 971, 1142
AhdI GACNNNNNGTC 1 cut(s) 634
AjnI CCWGG 2 cut(s) 397, 738
AloI GAACNNNNNNTCC 2 cut(s) 774, 806
AluBI AGCT 5 cut(s) 225, 289, 350, 510, 1061
AluI AGCT 5 cut(s) 225, 289, 350, 510, 1061
Alw26I GTCTC 6 cut(s) 11, 135, 168, 533, 737, 1089
AlwI GGATC 2 cut(s) 246, 339
Ama87I CYCGRG 1 cut(s) 234
Aor13HI TCCGGA 1 cut(s) 166
AoxI GGCC 3 cut(s) 136, 155, 923
ApeKI GCWGC 5 cut(s) 41, 347, 377, 977, 1058
ApoI RAATTY 2 cut(s) 433, 929
AspLEI GCGC 3 cut(s) 212, 309, 450
AspS9I GGNCC 5 cut(s) 136, 155, 460, 782, 923
AsuHPI GGTGA 3 cut(s) 92, 857, 1064
AvaI CYCGRG 1 cut(s) 234
AvaII GGWCC 2 cut(s) 460, 782
BaeI ACNNNNGTAYC 2 cut(s) 735, 768
BanI GGYRCC 1 cut(s) 447
BarI GAAGNNNNNNTAC 2 cut(s) 165, 197
BbsI GAAGAC 4 cut(s) 69, 180, 633, 1178
BbvI GCAGC 5 cut(s) 53, 359, 364, 964, 1070
BccI CCATC 2 cut(s) 270, 827
BceAI ACGGC 2 cut(s) 29, 82
BciT130I CCWGG 2 cut(s) 399, 740
BclI TGATCA 1 cut(s) 862
BcoDI GTCTC 6 cut(s) 11, 135, 168, 533, 737, 1089
BfaI CTAG 1 cut(s) 194
BfoI RGCGCY 1 cut(s) 451
BisI GCNGC 8 cut(s) 33, 42, 268, 348, 378, 696, 978, 1059
BlsI GCNGC 8 cut(s) 34, 43, 269, 349, 379, 697, 979, 1060
Bme1390I CCNGG 2 cut(s) 399, 740
Bme18I GGWCC 2 cut(s) 460, 782
BmeRI GACNNNNNGTC 1 cut(s) 634
BmeT110I CYCGRG 1 cut(s) 234
BmgT120I GGNCC 5 cut(s) 136, 155, 460, 782, 923
BmiI GGNNCC 4 cut(s) 156, 449, 462, 924
BmrFI CCNGG 2 cut(s) 399, 740
BmsI GCATC 3 cut(s) 536, 711, 1045
BpiI GAAGAC 4 cut(s) 69, 180, 633, 1178
BplI GAGNNNNNCTC 4 cut(s) 530, 562, 938, 970
BpmI CTGGAG 1 cut(s) 768
BpuEI CTTGAG 1 cut(s) 1071
BsaHI GRCGYC 3 cut(s) 30, 57, 448
BsaI GGTCTC 2 cut(s) 168, 533
BsaJI CCNNGG 5 cut(s) 158, 235, 361, 398, 761
BsaWI WCCGGW 1 cut(s) 166
BsaXI ACNNNNNCTCC 2 cut(s) 635, 665
Bsc4I CCNNNNNNNGG 3 cut(s) 444, 457, 779
Bse118I RCCGGY 1 cut(s) 450
Bse1I ACTGG 2 cut(s) 751, 773
Bse3DI GCAATG 1 cut(s) 1053
BseAI TCCGGA 1 cut(s) 166
BseBI CCWGG 2 cut(s) 399, 740
BseDI CCNNGG 5 cut(s) 158, 235, 361, 398, 761
BseGI GGATG 1 cut(s) 562
BseLI CCNNNNNNNGG 3 cut(s) 444, 457, 779
BseMI GCAATG 1 cut(s) 1053
BseNI ACTGG 2 cut(s) 751, 773
BseRI GAGGAG 2 cut(s) 341, 1124
BseXI GCAGC 5 cut(s) 53, 359, 364, 964, 1070
Bsh1236I CGCG 1 cut(s) 212
BshFI GGCC 3 cut(s) 138, 157, 925
BshNI GGYRCC 1 cut(s) 447
BsiHKCI CYCGRG 1 cut(s) 234
BsiSI CCGG 3 cut(s) 167, 255, 451
BslI CCNNNNNNNGG 3 cut(s) 444, 457, 779
BsmAI GTCTC 6 cut(s) 11, 135, 168, 533, 737, 1089
BsmI GAATGC 2 cut(s) 356, 907
BsnI GGCC 3 cut(s) 138, 157, 925
Bso31I GGTCTC 2 cut(s) 168, 533
BsoBI CYCGRG 1 cut(s) 234
Bsp13I TCCGGA 1 cut(s) 166
Bsp143I GATC 4 cut(s) 228, 251, 331, 862
BspANI GGCC 3 cut(s) 138, 157, 925
BspEI TCCGGA 1 cut(s) 166
BspFNI CGCG 1 cut(s) 212
BspHI TCATGA 1 cut(s) 658
BspLI GGNNCC 4 cut(s) 156, 449, 462, 924
BspPI GGATC 2 cut(s) 246, 339
BspT107I GGYRCC 1 cut(s) 447
BspTNI GGTCTC 2 cut(s) 168, 533
BsrBI CCGCTC 1 cut(s) 850
BsrDI GCAATG 1 cut(s) 1053
BsrFI RCCGGY 1 cut(s) 450
BsrI ACTGG 2 cut(s) 751, 773
BssAI RCCGGY 1 cut(s) 450
BssECI CCNNGG 5 cut(s) 158, 235, 361, 398, 761
BssMI GATC 4 cut(s) 228, 251, 331, 862
BssNI GRCGYC 3 cut(s) 30, 57, 448
BssT1I CCWWGG 2 cut(s) 158, 761
Bst2UI CCWGG 2 cut(s) 399, 740
Bst4CI ACNGT 4 cut(s) 496, 682, 878, 1072
Bst6I CTCTTC 4 cut(s) 78, 531, 580, 1137
BstACI GRCGYC 3 cut(s) 30, 57, 448
BstAPI GCANNNNNTGC 2 cut(s) 264, 353
BstC8I GCNNGC 3 cut(s) 96, 311, 700
BstDEI CTNAG 3 cut(s) 185, 443, 511
BstDSI CCRYGG 1 cut(s) 361
BstF5I GGATG 1 cut(s) 562
BstFNI CGCG 1 cut(s) 212
BstH2I RGCGCY 1 cut(s) 451
BstHHI GCGC 3 cut(s) 212, 309, 450
BstKTI GATC 4 cut(s) 231, 254, 334, 865
BstMAI GTCTC 6 cut(s) 11, 135, 168, 533, 737, 1089
BstMBI GATC 4 cut(s) 228, 251, 331, 862
BstNI CCWGG 2 cut(s) 399, 740
BstNSI RCATGY 1 cut(s) 702
BstSCI CCNGG 2 cut(s) 397, 738
BstUI CGCG 1 cut(s) 212
BstV1I GCAGC 5 cut(s) 53, 359, 364, 964, 1070
BstV2I GAAGAC 4 cut(s) 69, 180, 633, 1178
BstXI CCANNNNNNTGG 1 cut(s) 746
BsuRI GGCC 3 cut(s) 138, 157, 925
BtgI CCRYGG 1 cut(s) 361
BtsCI GGATG 1 cut(s) 562
BtsI GCAGTG 1 cut(s) 1042
BtsIMutI CAGTG 4 cut(s) 712, 780, 872, 1042
Cac8I GCNNGC 3 cut(s) 96, 311, 700
CciI TCATGA 1 cut(s) 658
CfoI GCGC 3 cut(s) 212, 309, 450
Cfr10I RCCGGY 1 cut(s) 450
Cfr13I GGNCC 5 cut(s) 136, 155, 460, 782, 923
CseI GACGC 3 cut(s) 38, 65, 100
Csp6I GTAC 1 cut(s) 1073
CviAII CATG 5 cut(s) 353, 457, 659, 699, 1079
CviQI GTAC 1 cut(s) 1073
DdeI CTNAG 3 cut(s) 185, 443, 511
DinI GGCGCC 1 cut(s) 449
DpnI GATC 4 cut(s) 230, 253, 333, 864
DpnII GATC 4 cut(s) 228, 251, 331, 862
DriI GACNNNNNGTC 1 cut(s) 634
Eam1104I CTCTTC 4 cut(s) 78, 531, 580, 1137
Eam1105I GACNNNNNGTC 1 cut(s) 634
EarI CTCTTC 4 cut(s) 78, 531, 580, 1137
EciI GGCGGA 2 cut(s) 84, 126
Eco130I CCWWGG 2 cut(s) 158, 761
Eco31I GGTCTC 2 cut(s) 168, 533
Eco47I GGWCC 2 cut(s) 460, 782
Eco57I CTGAAG 1 cut(s) 555
Eco88I CYCGRG 1 cut(s) 234
EcoO109I RGGNCCY 2 cut(s) 155, 782
EcoRI GAATTC 1 cut(s) 433
EcoRII CCWGG 2 cut(s) 397, 738
EcoT14I CCWWGG 2 cut(s) 158, 761
EcoT22I ATGCAT 2 cut(s) 358, 704
EgeI GGCGCC 1 cut(s) 449
EheI GGCGCC 1 cut(s) 449
ErhI CCWWGG 2 cut(s) 158, 761
FaeI CATG 5 cut(s) 356, 460, 662, 702, 1082
FatI CATG 5 cut(s) 352, 456, 658, 698, 1078
FauI CCCGC 2 cut(s) 46, 97
FauNDI CATATG 2 cut(s) 550, 609
FbaI TGATCA 1 cut(s) 862
FblI GTMKAC 3 cut(s) 54, 688, 936
Fnu4HI GCNGC 8 cut(s) 33, 42, 268, 348, 378, 696, 978, 1059
FokI GGATG 1 cut(s) 569
Fsp4HI GCNGC 8 cut(s) 33, 42, 268, 348, 378, 696, 978, 1059
FspBI CTAG 1 cut(s) 194
GlaI GCGC 3 cut(s) 211, 308, 449
GluI GCNGC 8 cut(s) 33, 42, 268, 348, 378, 696, 978, 1059
GsuI CTGGAG 1 cut(s) 768
HaeII RGCGCY 1 cut(s) 451
HaeIII GGCC 3 cut(s) 138, 157, 925
HapII CCGG 3 cut(s) 167, 255, 451
HgaI GACGC 3 cut(s) 38, 65, 100
HhaI GCGC 3 cut(s) 212, 309, 450
Hin1I GRCGYC 3 cut(s) 30, 57, 448
Hin1II CATG 5 cut(s) 356, 460, 662, 702, 1082
Hin6I GCGC 3 cut(s) 210, 307, 448
HinP1I GCGC 3 cut(s) 210, 307, 448
HincII GTYRAC 3 cut(s) 55, 639, 814
HindII GTYRAC 3 cut(s) 55, 639, 814
HinfI GANTC 4 cut(s) 176, 240, 482, 1082
HpaII CCGG 3 cut(s) 167, 255, 451
HphI GGTGA 3 cut(s) 92, 857, 1064
Hpy166II GTNNAC 6 cut(s) 55, 639, 689, 814, 872, 937
Hpy188I TCNGA 5 cut(s) 275, 336, 535, 733, 946
Hpy188III TCNNGA 2 cut(s) 167, 659
Hpy8I GTNNAC 6 cut(s) 55, 639, 689, 814, 872, 937
Hpy99I CGWCG 5 cut(s) 32, 50, 59, 94, 248
HpyAV CCTTC 3 cut(s) 145, 553, 575
HpyCH4III ACNGT 4 cut(s) 496, 682, 878, 1072
HpyCH4V TGCA 8 cut(s) 347, 356, 380, 456, 702, 778, 980, 1058
HpyF3I CTNAG 3 cut(s) 185, 443, 511
Hsp92I GRCGYC 3 cut(s) 30, 57, 448
Hsp92II CATG 5 cut(s) 356, 460, 662, 702, 1082
HspAI GCGC 3 cut(s) 210, 307, 448
KasI GGCGCC 1 cut(s) 447
Kpn2I TCCGGA 1 cut(s) 166
Ksp22I TGATCA 1 cut(s) 862
Kzo9I GATC 4 cut(s) 228, 251, 331, 862
LmnI GCTCC 1 cut(s) 222
Lsp1109I GCAGC 5 cut(s) 53, 359, 364, 964, 1070
LweI GCATC 3 cut(s) 536, 711, 1045
MaeI CTAG 1 cut(s) 194
MaeIII GTNAC 1 cut(s) 998
MalI GATC 4 cut(s) 230, 253, 333, 864
MbiI CCGCTC 1 cut(s) 850
MboI GATC 4 cut(s) 228, 251, 331, 862
MfeI CAATTG 1 cut(s) 381
MluCI AATT 9 cut(s) 217, 342, 381, 433, 562, 768, 824, 929, 971
Mly113I GGCGCC 1 cut(s) 448
MlyI GAGTC 2 cut(s) 170, 1091
Mph1103I ATGCAT 2 cut(s) 358, 704
MroI TCCGGA 1 cut(s) 166
MseI TTAA 2 cut(s) 303, 1014
MspA1I CMGCKG 2 cut(s) 695, 1061
MspI CCGG 3 cut(s) 167, 255, 451
MspR9I CCNGG 2 cut(s) 399, 740
MunI CAATTG 1 cut(s) 381
Mva1269I GAATGC 2 cut(s) 356, 907
MvaI CCWGG 2 cut(s) 399, 740
MvnI CGCG 1 cut(s) 212
NarI GGCGCC 1 cut(s) 448
NdeI CATATG 2 cut(s) 550, 609
NdeII GATC 4 cut(s) 228, 251, 331, 862
NlaIII CATG 5 cut(s) 356, 460, 662, 702, 1082
NlaIV GGNNCC 4 cut(s) 156, 449, 462, 924
NmeAIII GCCGAG 1 cut(s) 164
NsiI ATGCAT 2 cut(s) 358, 704
NspI RCATGY 1 cut(s) 702
PaeI GCATGC 1 cut(s) 702
PagI TCATGA 1 cut(s) 658
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PctI GAATGC 2 cut(s) 356, 907
PfeI GAWTC 2 cut(s) 240, 482
PkrI GCNGC 8 cut(s) 34, 43, 269, 349, 379, 697, 979, 1060
PleI GAGTC 2 cut(s) 170, 1090
PluTI GGCGCC 1 cut(s) 451
PpsI GAGTC 2 cut(s) 170, 1090
PpuMI RGGWCCY 1 cut(s) 782
Psp5II RGGWCCY 1 cut(s) 782
Psp6I CCWGG 2 cut(s) 397, 738
PspGI CCWGG 2 cut(s) 397, 738
PspN4I GGNNCC 4 cut(s) 156, 449, 462, 924
PspPI GGNCC 5 cut(s) 136, 155, 460, 782, 923
PspPPI RGGWCCY 1 cut(s) 782
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 1 cut(s) 1074
RsaNI GTAC 1 cut(s) 1073
SalI GTCGAC 1 cut(s) 53
SaqAI TTAA 2 cut(s) 303, 1014
SatI GCNGC 8 cut(s) 33, 42, 268, 348, 378, 696, 978, 1059
Sau3AI GATC 4 cut(s) 228, 251, 331, 862
Sau96I GGNCC 5 cut(s) 136, 155, 460, 782, 923
SchI GAGTC 2 cut(s) 170, 1091
ScrFI CCNGG 2 cut(s) 399, 740
SfaNI GCATC 3 cut(s) 536, 711, 1045
SfoI GGCGCC 1 cut(s) 449
SgrAI CRCCGGYG 1 cut(s) 450
SinI GGWCC 2 cut(s) 460, 782
SmlI CTYRAG 1 cut(s) 1086
SmoI CTYRAG 1 cut(s) 1086
SphI GCATGC 1 cut(s) 702
Sse9I AATT 9 cut(s) 217, 342, 381, 433, 562, 768, 824, 929, 971
SspDI GGCGCC 1 cut(s) 447
SspMI CTAG 1 cut(s) 194
StyD4I CCNGG 2 cut(s) 397, 738
StyI CCWWGG 2 cut(s) 158, 761
TaaI ACNGT 4 cut(s) 496, 682, 878, 1072
TaqI TCGA 5 cut(s) 48, 54, 179, 243, 291
TasI AATT 9 cut(s) 217, 342, 381, 433, 562, 768, 824, 929, 971
TauI GCSGC 3 cut(s) 35, 270, 698
TfiI GAWTC 2 cut(s) 240, 482
Tru1I TTAA 2 cut(s) 303, 1014
Tru9I TTAA 2 cut(s) 303, 1014
TscAI CASTG 4 cut(s) 712, 780, 872, 1042
TseI GCWGC 5 cut(s) 41, 347, 377, 977, 1058
TspDTI ATGAA 5 cut(s) 555, 675, 914, 1136, 1184
TspGWI ACGGA 5 cut(s) 261, 289, 378, 656, 1124
TspRI CASTG 4 cut(s) 712, 780, 872, 1042
VpaK11BI GGWCC 2 cut(s) 460, 782
XapI RAATTY 2 cut(s) 433, 929
XceI RCATGY 1 cut(s) 702
XmiI GTMKAC 3 cut(s) 54, 688, 936
XspI CTAG 1 cut(s) 194
Zsp2I ATGCAT 2 cut(s) 358, 704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.