Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0011822

Physical Location & Seq

Genomic Coordinates Forward (+)

11401791 .. 11404852

Gene Structure 3062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG134300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1167 bp

ATGGAACCGGAACTGGCCGAGGACTCCGTCGCCGTCATCGAAGTCGACGCCTCCGAAGACGACGCCGGAAGCGGCAAAGATGAGGCGGCCAAAGGCGGAAAGGGTAAGAAGGGAAAGAGCAAAGTGAGGGGGCCTTGGTCTCCGGAAGAAGACAAGGTGCTGAGTCGGCTGGTGAGTAAGTTCGGGGCCAGGAATTGGAGCTTGATCGCCCGCGGAATTTCCGGACGGTCCGGCAAGTCTTGCCGGCTCCGGTGGTGTAACCAGCTCGACCCCATCCTTAAGCGCAAGCCCTTTTCTGAGGAGGAAGATCAGATGATAATTGCAGCCCACACAATCCATGGAAACAAATGGGCTGCAATCGCAAGGCTTTTACCAGGAAGAACAGATAATGCCATAAAAAACCACTGGAACTCCACCCTACGTCGCCGGGATCCAGACAGAATGAAATCAGAATCAGGTAATATGGTTGAAGATGTTAGCTTGGACAAAACAATAGCATCTTCTGAAGAAACACTCTCAAATGGTGATGTCAATTCATCTAAATCTACGGAAGGAAAAGAAGTCAGTTCTCTAGAGTATACAGATGATCAACATGAAGACAAGGTGTCAACAGATGGTCTGTATGGTAATGAAGCCAGAGAACCTTGTACTCTTTTTAGGCCAGTGGCACGTGTAAGTGCTTTTAGTGTATATAACCATTTAGGTGGCCAGGATCCTTCATCATCATTGCAAAGGCCAATTCCAGTTCAAGGACCTCTGGTTCAAGTAGCAAAACTAGATGTTGGCATTTGTAAATTGGTCGAAGGAATTTATGGTGAGTGGTCGGTGCCTGATCAGTGTGGTCATGGCTGCTGTTGCACACAGAATGGCAGGAATACTGAAAACTCTTTGTTGGGGCCAGATTTTGTGGAATTCTCTGAGCCTCCCTGTTTTCCGAGTTTTGAATTGGCTGCAATTGCCACAGATATAAGTAACCTTGCTTGGCTTAAAAGTGGTTTGGAGAATAGTAGTGCAAGGGTAACAGGTGATGCAGCTGGTAGTATACCCTCTCATGCGTCTCAAGGGCAACTGGGGCATTTTGAGGAGAGTCGAATGAATCATCTTTTTCATCATGAAGAGAGAAAGGATAGGTTAATGAGCATGAAGACTAATGTGCTGTCAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0046686 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0097305 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000022 GO:2000031 GO:2000112 GO:2001023 GO:2001038 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

388

Amino Acids

42.42

Weight (kDa)

5.65

Isoelectric Point (pI)

38.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	43 - 89	9.5e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	46 - 105	5.1e-17	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	95 - 139	4.1e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	98 - 142	1.9e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09230
fragaria_vesca	FvH4_6g12440
malus_domestica	MD04G1142200.v1.1 MD12G1156800.v1.1
prunus_persica	Prupe.6G267600_v2.0.a1
pyrus_communis	pycom04g12920 pycom12g14900
rosa_chinensis	RchiOBHm_Chr3g0464251
rosa_laevigata	RLG00000024713
rosa_multiflora	Rmu_co7985966.1_g000001 Rmu_sc0007811.1_g000007 Rmu_sc0024604.1_g000003
rosa_roxburghii	Rroxscaffold_6G00415900
rosa_rugosa	Rorug03G0071100 Rorug03G0071100
rosa_samantha	Rh3BG132900 Rh3CG135100 Rh3DG134300
rosa_wichuraiana	Rw3G010870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	826
AccB7I	CCANNNNNTGG	1 cut(s)	195
AccI	GTMKAC	3 cut(s)	45, 578, 1042
AccII	CGCG	1 cut(s)	213
AccIII	TCCGGA	2 cut(s)	142, 221
AciI	CCGC	5 cut(s)	72, 86, 96, 211, 213
AclWI	GGATC	4 cut(s)	425, 438, 707, 720
AcoI	YGGCCR	3 cut(s)	15, 87, 706
AcsI	RAATTY	3 cut(s)	216, 807, 911
AcuI	CTGAAG	1 cut(s)	525
AcvI	CACGTG	1 cut(s)	671
AcyI	GRCGYC	2 cut(s)	48, 63
AfaI	GTAC	1 cut(s)	649
AfiI	CCNNNNNNNGG	2 cut(s)	195, 749
AflII	CTTAAG	1 cut(s)	278
AflIII	ACRYGT	1 cut(s)	670
AgsI	TTSAA	4 cut(s)	470, 749, 764, 944
AhdI	GACNNNNNGTC	1 cut(s)	604
AjnI	CCWGG	3 cut(s)	188, 373, 708
AloI	GAACNNNNNNTCC	2 cut(s)	744, 776
AluBI	AGCT	4 cut(s)	201, 265, 480, 1034
AluI	AGCT	4 cut(s)	201, 265, 480, 1034
Alw26I	GTCTC	2 cut(s)	144, 1062
AlwI	GGATC	4 cut(s)	425, 438, 707, 720
Aor13HI	TCCGGA	2 cut(s)	142, 221
AoxI	GGCC	8 cut(s)	15, 87, 131, 186, 659, 706, 734, 896
ApeKI	GCWGC	5 cut(s)	323, 353, 849, 950, 1031
ApoI	RAATTY	3 cut(s)	216, 807, 911
AspLEI	GCGC	1 cut(s)	285
AspS9I	GGNCC	5 cut(s)	131, 186, 228, 752, 896
AsuC2I	CCSGG	1 cut(s)	428
AsuHPI	GGTGA	4 cut(s)	184, 536, 827, 1037
AvaII	GGWCC	2 cut(s)	228, 752
BalI	TGGCCA	1 cut(s)	708
BamHI	GGATCC	2 cut(s)	430, 712
BanI	GGYRCC	1 cut(s)	826
BbrPI	CACGTG	1 cut(s)	671
BbsI	GAAGAC	4 cut(s)	63, 156, 603, 1151
BbvI	GCAGC	5 cut(s)	335, 340, 836, 937, 1043
BccI	CCATC	2 cut(s)	281, 608
BceAI	ACGGC	1 cut(s)	17
BciT130I	CCWGG	3 cut(s)	190, 375, 710
BclI	TGATCA	2 cut(s)	586, 832
BcnI	CCSGG	1 cut(s)	428
BcoDI	GTCTC	2 cut(s)	144, 1062
BfaI	CTAG	2 cut(s)	572, 776
BfrI	CTTAAG	1 cut(s)	278
BisI	GCNGC	7 cut(s)	73, 87, 324, 354, 850, 951, 1032
BlsI	GCNGC	7 cut(s)	74, 88, 325, 355, 851, 952, 1033
Bme1390I	CCNGG	4 cut(s)	190, 375, 428, 710
Bme18I	GGWCC	2 cut(s)	228, 752
BmeRI	GACNNNNNGTC	1 cut(s)	604
BmgT120I	GGNCC	5 cut(s)	131, 186, 228, 752, 896
BmiI	GGNNCC	8 cut(s)	6, 132, 187, 248, 432, 714, 828, 897
BmrFI	CCNGG	4 cut(s)	190, 375, 428, 710
BmrI	ACTGGG	1 cut(s)	1079
BmsI	GCATC	2 cut(s)	506, 1018
BmuI	ACTGGG	1 cut(s)	1079
BpiI	GAAGAC	4 cut(s)	63, 156, 603, 1151
BpuEI	CTTGAG	1 cut(s)	1044
BpuMI	CCSGG	1 cut(s)	428
BsaAI	YACGTR	1 cut(s)	671
BsaHI	GRCGYC	2 cut(s)	48, 63
BsaI	GGTCTC	1 cut(s)	144
BsaJI	CCNNGG	4 cut(s)	18, 134, 211, 337
BsaWI	WCCGGW	4 cut(s)	7, 142, 221, 249
BsaXI	ACNNNNNCTCC	2 cut(s)	395, 425
Bsc4I	CCNNNNNNNGG	2 cut(s)	195, 749
Bse118I	RCCGGY	1 cut(s)	243
Bse1I	ACTGG	5 cut(s)	18, 410, 662, 743, 1074
Bse3DI	GCAATG	1 cut(s)	725
BseAI	TCCGGA	2 cut(s)	142, 221
BseBI	CCWGG	3 cut(s)	190, 375, 710
BseDI	CCNNGG	4 cut(s)	18, 134, 211, 337
BseGI	GGATG	1 cut(s)	273
BseLI	CCNNNNNNNGG	2 cut(s)	195, 749
BseMI	GCAATG	1 cut(s)	725
BseMII	CTCAG	3 cut(s)	152, 288, 909
BseNI	ACTGG	5 cut(s)	18, 410, 662, 743, 1074
BseRI	GAGGAG	2 cut(s)	314, 1097
BseXI	GCAGC	5 cut(s)	335, 340, 836, 937, 1043
Bsh1236I	CGCG	1 cut(s)	213
BshFI	GGCC	8 cut(s)	17, 89, 133, 188, 661, 708, 736, 898
BshNI	GGYRCC	1 cut(s)	826
BsiSI	CCGG	8 cut(s)	8, 66, 143, 222, 231, 244, 250, 427
BslI	CCNNNNNNNGG	2 cut(s)	195, 749
BsmAI	GTCTC	2 cut(s)	144, 1062
BsmBI	CGTCTC	1 cut(s)	1062
BsnI	GGCC	8 cut(s)	17, 89, 133, 188, 661, 708, 736, 898
Bso31I	GGTCTC	1 cut(s)	144
Bsp13I	TCCGGA	2 cut(s)	142, 221
Bsp143I	GATC	6 cut(s)	204, 307, 430, 586, 712, 832
Bsp19I	CCATGG	1 cut(s)	337
BspACI	CCGC	5 cut(s)	72, 86, 96, 211, 213
BspANI	GGCC	8 cut(s)	17, 89, 133, 188, 661, 708, 736, 898
BspCNI	CTCAG	3 cut(s)	153, 289, 910
BspEI	TCCGGA	2 cut(s)	142, 221
BspFNI	CGCG	1 cut(s)	213
BspHI	TCATGA	1 cut(s)	1111
BspLI	GGNNCC	8 cut(s)	6, 132, 187, 248, 432, 714, 828, 897
BspPI	GGATC	4 cut(s)	425, 438, 707, 720
BspT107I	GGYRCC	1 cut(s)	826
BspTI	CTTAAG	1 cut(s)	278
BspTNI	GGTCTC	1 cut(s)	144
BsrDI	GCAATG	1 cut(s)	725
BsrFI	RCCGGY	1 cut(s)	243
BsrI	ACTGG	5 cut(s)	18, 410, 662, 743, 1074
BssAI	RCCGGY	1 cut(s)	243
BssECI	CCNNGG	4 cut(s)	18, 134, 211, 337
BssMI	GATC	6 cut(s)	204, 307, 430, 586, 712, 832
BssNAI	GTATAC	2 cut(s)	579, 1043
BssNI	GRCGYC	2 cut(s)	48, 63
BssT1I	CCWWGG	2 cut(s)	134, 337
Bst1107I	GTATAC	2 cut(s)	579, 1043
Bst2UI	CCWGG	3 cut(s)	190, 375, 710
Bst4CI	ACNGT	1 cut(s)	228
Bst6I	CTCTTC	1 cut(s)	1110
BstACI	GRCGYC	2 cut(s)	48, 63
BstAFI	CTTAAG	1 cut(s)	278
BstAPI	GCANNNNNTGC	1 cut(s)	240
BstBAI	YACGTR	1 cut(s)	671
BstC8I	GCNNGC	3 cut(s)	211, 245, 287
BstDEI	CTNAG	3 cut(s)	161, 297, 918
BstDSI	CCRYGG	2 cut(s)	211, 337
BstF5I	GGATG	1 cut(s)	273
BstFNI	CGCG	1 cut(s)	213
BstHHI	GCGC	1 cut(s)	285
BstKTI	GATC	6 cut(s)	207, 310, 433, 589, 715, 835
BstMAI	GTCTC	2 cut(s)	144, 1062
BstMBI	GATC	6 cut(s)	204, 307, 430, 586, 712, 832
BstMWI	GCNNNNNNNGC	6 cut(s)	166, 240, 359, 855, 956, 1072
BstNI	CCWGG	3 cut(s)	190, 375, 710
BstSCI	CCNGG	4 cut(s)	188, 373, 426, 708
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	5 cut(s)	335, 340, 836, 937, 1043
BstV2I	GAAGAC	4 cut(s)	63, 156, 603, 1151
BstX2I	RGATCY	2 cut(s)	430, 712
BstXI	CCANNNNNNTGG	1 cut(s)	704
BstYI	RGATCY	2 cut(s)	430, 712
BstZ17I	GTATAC	2 cut(s)	579, 1043
BsuRI	GGCC	8 cut(s)	17, 89, 133, 188, 661, 708, 736, 898
BtgI	CCRYGG	2 cut(s)	211, 337
BtsCI	GGATG	1 cut(s)	273
BtsIMutI	CAGTG	3 cut(s)	403, 669, 842
Cac8I	GCNNGC	3 cut(s)	211, 245, 287
CciI	TCATGA	1 cut(s)	1111
CfoI	GCGC	1 cut(s)	285
Cfr10I	RCCGGY	1 cut(s)	243
Cfr13I	GGNCC	5 cut(s)	131, 186, 228, 752, 896
Cfr42I	CCGCGG	1 cut(s)	214
CpoI	CGGWCCG	1 cut(s)	228
CseI	GACGC	3 cut(s)	56, 71, 1044
Csp6I	GTAC	1 cut(s)	648
CspI	CGGWCCG	1 cut(s)	228
CviAII	CATG	6 cut(s)	338, 593, 845, 1052, 1112, 1141
CviQI	GTAC	1 cut(s)	648
DdeI	CTNAG	3 cut(s)	161, 297, 918
DpnI	GATC	6 cut(s)	206, 309, 432, 588, 714, 834
DpnII	GATC	6 cut(s)	204, 307, 430, 586, 712, 832
DriI	GACNNNNNGTC	1 cut(s)	604
EaeI	YGGCCR	3 cut(s)	15, 87, 706
Eam1104I	CTCTTC	1 cut(s)	1110
Eam1105I	GACNNNNNGTC	1 cut(s)	604
EarI	CTCTTC	1 cut(s)	1110
EciI	GGCGGA	1 cut(s)	111
Eco130I	CCWWGG	2 cut(s)	134, 337
Eco31I	GGTCTC	1 cut(s)	144
Eco47I	GGWCC	2 cut(s)	228, 752
Eco57I	CTGAAG	1 cut(s)	525
Eco72I	CACGTG	1 cut(s)	671
EcoO109I	RGGNCCY	2 cut(s)	131, 752
EcoRI	GAATTC	1 cut(s)	911
EcoRII	CCWGG	3 cut(s)	188, 373, 708
EcoT14I	CCWWGG	2 cut(s)	134, 337
ErhI	CCWWGG	2 cut(s)	134, 337
Esp3I	CGTCTC	1 cut(s)	1062
FaeI	CATG	6 cut(s)	341, 596, 848, 1055, 1115, 1144
FatI	CATG	6 cut(s)	337, 592, 844, 1051, 1111, 1140
FauI	CCCGC	1 cut(s)	218
FbaI	TGATCA	2 cut(s)	586, 832
FblI	GTMKAC	3 cut(s)	45, 578, 1042
Fnu4HI	GCNGC	7 cut(s)	73, 87, 324, 354, 850, 951, 1032
FokI	GGATG	1 cut(s)	260
Fsp4HI	GCNGC	7 cut(s)	73, 87, 324, 354, 850, 951, 1032
FspBI	CTAG	2 cut(s)	572, 776
GlaI	GCGC	1 cut(s)	284
GluI	GCNGC	7 cut(s)	73, 87, 324, 354, 850, 951, 1032
HaeIII	GGCC	8 cut(s)	17, 89, 133, 188, 661, 708, 736, 898
HapII	CCGG	8 cut(s)	8, 66, 143, 222, 231, 244, 250, 427
HgaI	GACGC	3 cut(s)	56, 71, 1044
HhaI	GCGC	1 cut(s)	285
Hin1I	GRCGYC	2 cut(s)	48, 63
Hin1II	CATG	6 cut(s)	341, 596, 848, 1055, 1115, 1144
Hin6I	GCGC	1 cut(s)	283
HinP1I	GCGC	1 cut(s)	283
HincII	GTYRAC	3 cut(s)	46, 609, 1161
HindII	GTYRAC	3 cut(s)	46, 609, 1161
HinfI	GANTC	5 cut(s)	23, 163, 452, 1087, 1096
HpaII	CCGG	8 cut(s)	8, 66, 143, 222, 231, 244, 250, 427
HphI	GGTGA	4 cut(s)	184, 536, 827, 1037
Hpy166II	GTNNAC	5 cut(s)	46, 579, 609, 1043, 1161
Hpy188I	TCNGA	7 cut(s)	55, 298, 312, 451, 505, 919, 936
Hpy188III	TCNNGA	5 cut(s)	143, 222, 434, 572, 1112
Hpy8I	GTNNAC	5 cut(s)	46, 579, 609, 1043, 1161
Hpy99I	CGWCG	4 cut(s)	32, 50, 65, 426
HpyAV	CCTTC	4 cut(s)	103, 545, 726, 797
HpyCH4III	ACNGT	1 cut(s)	228
HpyCH4IV	ACGT	2 cut(s)	421, 670
HpyCH4V	TGCA	7 cut(s)	323, 356, 730, 858, 953, 1013, 1031
HpyF10VI	GCNNNNNNNGC	6 cut(s)	166, 240, 359, 855, 956, 1072
HpyF3I	CTNAG	3 cut(s)	161, 297, 918
HpySE526I	ACGT	2 cut(s)	421, 670
Hsp92I	GRCGYC	2 cut(s)	48, 63
Hsp92II	CATG	6 cut(s)	341, 596, 848, 1055, 1115, 1144
HspAI	GCGC	1 cut(s)	283
Kpn2I	TCCGGA	2 cut(s)	142, 221
KroI	GCCGGC	1 cut(s)	243
KroNI	GCCGGC	1 cut(s)	245
Ksp22I	TGATCA	2 cut(s)	586, 832
KspI	CCGCGG	1 cut(s)	214
Kzo9I	GATC	6 cut(s)	204, 307, 430, 586, 712, 832
LmnI	GCTCC	2 cut(s)	198, 252
Lsp1109I	GCAGC	5 cut(s)	335, 340, 836, 937, 1043
LweI	GCATC	2 cut(s)	506, 1018
MaeI	CTAG	2 cut(s)	572, 776
MaeII	ACGT	2 cut(s)	421, 670
MaeIII	GTNAC	3 cut(s)	257, 971, 1018
MalI	GATC	6 cut(s)	206, 309, 432, 588, 714, 834
MboI	GATC	6 cut(s)	204, 307, 430, 586, 712, 832
MfeI	CAATTG	1 cut(s)	954
MflI	RGATCY	2 cut(s)	430, 712
MlsI	TGGCCA	1 cut(s)	708
MluNI	TGGCCA	1 cut(s)	708
MlyI	GAGTC	3 cut(s)	17, 172, 1096
Mox20I	TGGCCA	1 cut(s)	708
MroI	TCCGGA	2 cut(s)	142, 221
MroNI	GCCGGC	1 cut(s)	243
MscI	TGGCCA	1 cut(s)	708
MseI	TTAA	3 cut(s)	279, 987, 1133
MslI	CAYNNNNRTG	1 cut(s)	702
Msp20I	TGGCCA	1 cut(s)	708
MspA1I	CMGCKG	2 cut(s)	213, 1034
MspCI	CTTAAG	1 cut(s)	278
MspI	CCGG	8 cut(s)	8, 66, 143, 222, 231, 244, 250, 427
MspR9I	CCNGG	4 cut(s)	190, 375, 428, 710
MunI	CAATTG	1 cut(s)	954
MvaI	CCWGG	3 cut(s)	190, 375, 710
MvnI	CGCG	1 cut(s)	213
MwoI	GCNNNNNNNGC	6 cut(s)	166, 240, 359, 855, 956, 1072
NaeI	GCCGGC	1 cut(s)	245
NciI	CCSGG	1 cut(s)	428
NcoI	CCATGG	1 cut(s)	337
NdeII	GATC	6 cut(s)	204, 307, 430, 586, 712, 832
NgoMIV	GCCGGC	1 cut(s)	243
NlaIII	CATG	6 cut(s)	341, 596, 848, 1055, 1115, 1144
NlaIV	GGNNCC	8 cut(s)	6, 132, 187, 248, 432, 714, 828, 897
NmeAIII	GCCGAG	1 cut(s)	43
PagI	TCATGA	1 cut(s)	1111
PcsI	WCGNNNNNNNCGW	2 cut(s)	36, 51
PdiI	GCCGGC	1 cut(s)	245
PfeI	GAWTC	2 cut(s)	452, 1096
PflFI	GACNNNGTC	1 cut(s)	26
PflMI	CCANNNNNTGG	1 cut(s)	195
PkrI	GCNGC	7 cut(s)	74, 88, 325, 355, 851, 952, 1033
PleI	GAGTC	3 cut(s)	17, 171, 1095
PmaCI	CACGTG	1 cut(s)	671
PmlI	CACGTG	1 cut(s)	671
PpsI	GAGTC	3 cut(s)	17, 171, 1095
Ppu21I	YACGTR	1 cut(s)	671
PpuMI	RGGWCCY	1 cut(s)	752
Psp5II	RGGWCCY	1 cut(s)	752
Psp6I	CCWGG	3 cut(s)	188, 373, 708
PspCI	CACGTG	1 cut(s)	671
PspGI	CCWGG	3 cut(s)	188, 373, 708
PspN4I	GGNNCC	8 cut(s)	6, 132, 187, 248, 432, 714, 828, 897
PspPI	GGNCC	5 cut(s)	131, 186, 228, 752, 896
PspPPI	RGGWCCY	1 cut(s)	752
PsuI	RGATCY	2 cut(s)	430, 712
PsyI	GACNNNGTC	1 cut(s)	26
PvuII	CAGCTG	1 cut(s)	1034
RsaI	GTAC	1 cut(s)	649
RsaNI	GTAC	1 cut(s)	648
RseI	CAYNNNNRTG	1 cut(s)	702
Rsr2I	CGGWCCG	1 cut(s)	228
RsrII	CGGWCCG	1 cut(s)	228
SacII	CCGCGG	1 cut(s)	214
SalI	GTCGAC	1 cut(s)	44
SaqAI	TTAA	3 cut(s)	279, 987, 1133
SatI	GCNGC	7 cut(s)	73, 87, 324, 354, 850, 951, 1032
Sau3AI	GATC	6 cut(s)	204, 307, 430, 586, 712, 832
Sau96I	GGNCC	5 cut(s)	131, 186, 228, 752, 896
SchI	GAGTC	3 cut(s)	17, 172, 1096
ScrFI	CCNGG	4 cut(s)	190, 375, 428, 710
SfaNI	GCATC	2 cut(s)	506, 1018
Sfr303I	CCGCGG	1 cut(s)	214
SgrBI	CCGCGG	1 cut(s)	214
SinI	GGWCC	2 cut(s)	228, 752
SmiMI	CAYNNNNRTG	1 cut(s)	702
SmlI	CTYRAG	2 cut(s)	278, 1059
SmoI	CTYRAG	2 cut(s)	278, 1059
SsiI	CCGC	5 cut(s)	72, 86, 96, 211, 213
SspMI	CTAG	2 cut(s)	572, 776
StyD4I	CCNGG	4 cut(s)	188, 373, 426, 708
StyI	CCWWGG	2 cut(s)	134, 337
TaaI	ACNGT	1 cut(s)	228
TaiI	ACGT	2 cut(s)	424, 673
TaqI	TCGA	5 cut(s)	39, 45, 267, 801, 1090
TatI	WGTACW	1 cut(s)	647
TauI	GCSGC	2 cut(s)	75, 89
TfiI	GAWTC	2 cut(s)	452, 1096
Tru1I	TTAA	3 cut(s)	279, 987, 1133
Tru9I	TTAA	3 cut(s)	279, 987, 1133
TscAI	CASTG	3 cut(s)	410, 669, 842
TseI	GCWGC	5 cut(s)	323, 353, 849, 950, 1031
TspDTI	ATGAA	9 cut(s)	458, 525, 609, 645, 708, 1097, 1109, 1128, 1157
TspGWI	ACGGA	2 cut(s)	16, 563
TspRI	CASTG	3 cut(s)	410, 669, 842
Tth111I	GACNNNGTC	1 cut(s)	26
Van91I	CCANNNNNTGG	1 cut(s)	195
Vha464I	CTTAAG	1 cut(s)	278
VpaK11BI	GGWCC	2 cut(s)	228, 752
XapI	RAATTY	3 cut(s)	216, 807, 911
XbaI	TCTAGA	1 cut(s)	571
XcmI	CCANNNNNNNNNTGG	1 cut(s)	335
XmiI	GTMKAC	3 cut(s)	45, 578, 1042
XspI	CTAG	2 cut(s)	572, 776

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.