Prupe.6G277600_v2.0.a1

Domain of unknown function (DUF3453)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
26075213 .. 26086049
10837 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G277600.1

Sequence Viewer

Length: 3999 bp
ATGGTGGGCATGATGATGGTCGCGAACTCCAACGAAAGACTCGCGAGTCTCATGGACTCAGCCATCTTGGCCTCTGACATACCGTCGAAGCTCGACCGACTACGCCAATCAAAGCAAGATTTGGTGGTCCAACAAGACCCTGCGTTGCTCTCTGGGCTCCTTCCTCGCCTCTTCGAGCTTCAGTCCGACCGGTTCAGTCCGGTTCGAAAATTTGCCACTGAAATGCTTGGCGAAATTGGACTGATGCACGTAGAATTATTACCAGAAATTGTACCTTCGTTAATTAATGTTTTGAGTGATGGAACACCGGCTGTTGCTCGACAAGCCATCACTAGTGGGATTCATTTATTTCGTTGTGTTCTCGAAAAGGTTTCAATTCAGGGTTTACATTCTAGTGAATTGGACAGTTTGCTTGAGTCATCTTGGGCATGGGTGTTAAAGTTGAAGGAGGAAATATACTCGATAGCTTTTCGGCCAGGAAGCGGGGGGATAAGGTTGCTAGCACTGAAATTTGTTGAATCAGTCATTCTTCTTTACACTCCTGATCCTAATGGCTCCCCAGAGCCCCCTGCTCATGAAGGGGACTTGGTGGAATTTAATATATCTTGGCTTCGTGGTGGCCATCTCCTACTCAATGTTGGAGATTTGTCAATTGAGGCTAGTAAAAGTTTGGGTTTATTGCTTGATCAACTCAGGTTCCCAACCGTGAAATCGCTTGGTAACTTAGTGATCGTTGTGCTTATTAATAGTCTTTCAGCAATTGCGAAGAAGAGGCCTGCATTCTATGGTCGCATTTTGCCTGTATTACTTGGATTTGATCCCTCAAGCGCTGTCATTAATGGGGTACATGTCACTGGGGCGCACCATGCCTTAAAAAATGCCTTCCTCACCTGCTTAAAATGTACACACAAGGGTGCTGCACCGTGGCGGGATCGTTTAGTTGGGGCCTTGAGAAAGTTGAAAGCTGGAGGGTTGGTAGAGCAAGCCATTCCTCAAGCTTCCAAGATTAATGGAAGTGTGGAGGACGGACTAGATGATTCTCCAATTACTAAGGAGGAGAAACCCACAATTAAAACATCTAATGCTGTGCAAATTAGTTCTGGGAGGAAACGGTTAGGAGCACTGGATAGTAGTGACCTTGCAGAGGACGAAGATGTTTCTGGAAAGCGTGCCAAATCGACATCTAGTGTCTCTGAGGAATCAGTGAAAGAGTGCGATAGGAATATTTCTGTGTCTCAGGATGACATTTCTTCAAGTGGAACTACCACTTCTAGAGGAGATAGTGATAGTGGACCTGTGCAGCAACTTGTTGCTATGTTTGGTGCATTGGTAGCTCAAGGTGAAAAAGCGGTTGGTTCTTTAGAAATTCTTATCTCAAGTATCTCTGCTGACTTGCTAGCAGAGGTTGTGATGGCTAATATGTACAACCTTCCTCCCAATCTTCCTGGAGCTGAAGGAGATGAATCTCTGGTGAACATGGGTATAGTTGGCGGTGATTCTCGAGTTAAATATCCACCATCATTTATTGCTGATGTTCTCTCACTTACAAGTACTTTCCCTCCGATAGCTGCACTCCTAGATACTCATCAATCAGTGTCCAATGATATAGTGAAACTCGAAGTGGAGGAAGAACAGGTAGCATCTGTAGTTGATAGCGCTGTTGCAAGTACTGGCATGGATTATGAAGCTGAAAATTCTACGTTGCCGACTGGTTTACCATCTTCATCTGAAGCATTTTTATCCGAAATGGAGAAGGGTTGTCAACCTGTGCCATCTGATGTTCATGATATGGAATATCTTGAGAGTGAAATACCTGGGCTGGATTCTTCTGCTTGTAATAGTGGATTATCAGAACCCTTCGTTGCATCCTCATCAGCTTTAATGGATGTAGAAGATGCAAGTCAAGAGCAAGTTACCAGTTCGGGTCAAGGGACACAACTTAATGTACTTCCATCACTGTCAGCGGATAAGTCTGAGGAGCTTAGCCCAAGAGCTGCCGTTGCAGATGTCAATAGCCTGGTTTCTTCAACAGCAACTTCAGTTGGGTTGTCCTCTCATCTTGTCTTGCCCAAGATGTCAGCACCGGTAGTCATCCTTGCTGATGAAGAAAAGGATCAGTTGCAGAAATTAGCTTTTTCGCGCATCATCGAGGCATATAAGCAAATAGCTATTGCTGGAGGTTCACAATTACGATGCTCCCTCCTTATAAATTTAGGAGTTGAGTTCCCTTTGGAGTTAGACCCATGGAAACTGCTGCAGAAGCATATCTTGGCAGATTATACGAATAATGAGGGACATGAGTTGACATTGCGTGTCCTATACAGGTTATTTGGAGAGGCAGAAGAGGAACACGATTTCTTTTCTTCAACAACTGCTACTTCTGTATATGAAACGTTCCTTTTGAATGCGGCAGAAACACTTAGAGATTCTTTTCCAGCATCTGACAAATCATTAAGCAGATTACTTGGCGAGGTTCCTTATTTACCAAATTCAGTTCTGAAATTATTGGAGTGCATGTGCTCACCTGGAAGCAGCGACACAGCTGAGAAGGAAACACAAGGTGGGGATCGAGTGACTCAAGGTCTCAGCACCGTGTGGAGCCTGATTTTGCTGAGGCCTCCTTTCCGCGATCCCTGCTTAAAAATTGCTTTACAGAGTGCAGTTTATCATCTGGAGGAAGTGCGTATGAAGGCTATACGTCTGGTTGCAAACAAGCTTTATCCTTTGTCATCCATTGCTCAACGAATAGAAGATTTCGCAATTGAAATGTTGCTTTCTGTAAAATGTGGTGATGCAACTGAAAGAACAGATGCTGAAGGATCAAAAACAGAATCACAGAAGGATTCTGATTTGGAAAAGCATTCAAATGAACCTCCAGCTGTGAGTGGTAACAGTAAAGATATCTCCTCCGATACTCATCAATCATGCAATTCTCAAAGTGTGCCATCCCTTTCAATTGCTGAGGCCCAGCGGTGTTTGTCATTATATTTTGCTCTATGTACAAAGAAGCATTCCCTTTTTCGCCAAATCTTTGCTGTTTATGGAAGTGCATCAAAGGCCGTTAAGCAGGCAGTTCATCGTCACATTCCAATACTTGTACGTACTATGGGATCGTCACCAGATCTTCTTGAAATTATTTCTGATCCTCCAAGTGGAAGCGAGAACCTCCTGATGCAGGTTTTGCATACACTGACAGATGGGATAGTTCCTTCTCGAGAACTGGTTTTTACTGTTAGGAAGCTATATGATTCAAAACTGAAGGATGTAGAGATTCTTATTCCAATATTGCCCTTTTTACCGAAAGAAGAGGTTATGCTTATATTTCCCCAACTTGTGAATCTTCAACTGGATAAGTTCCAAGCAGCACTAACTCGCACACTACAGGGATCATCCAATTCTGGTCCTCTTCTTGCTCCAGCTGAAATCTTGATTGCTATCCATGGAATTGATCCCGACAGAGATGGAATTCCACTAAAGAAGGTCACAGATGCATGCAACGCCTGCTTTGAGCAGAGGCAGATATTCACCCAACAAGTTCTTGCCAAAGTTTTGAATCAATTGGTTGAGCAGATTCCCCTTCCTTTACTGTTCATGCGTACAGTATTACAAGCCATAGGTGCTTTTCCTGCACTGGTGGATTTTATAATGGAGATCCTCTCTCGACTTGTGAGCAAGCAGATATGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGCGCGTTCTTGACAAAGCCTCAGTCATTTGGCGTCCTGCTTCAGCTACCTCCAGCACAGCTAGAAAATGCACTGAAGAGAACTGCAGCTCTGAAAGCACCATTGGTTGCTCACGCTAGCCAACCGGACATCCGATCTTCACTTCCAAGGTCCATATTGGTAGTTCTAGGAATTGTTTCAGATTCTCAGGCACAAACCAGTCAGTCTCAGGCGGGAGATGCAAGCAACTCAGATAAGGAGGCAGTCGCAGAGAAATCAAAGGAGTCATCCAGTGCTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1333

Amino Acids

143.85

Weight (kDa)

5.13

Isoelectric Point (pI)

50.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2207, 3644
AarI CACCTGC 1 cut(s) 899
AasI GACNNNNNNGTC 1 cut(s) 45
Acc36I ACCTGC 2 cut(s) 899, 3166
AccII CGCG 5 cut(s) 23, 44, 2140, 2628, 3722
AciI CCGC 9 cut(s) 483, 928, 1349, 1491, 1964, 2408, 2626, 2971, 3929
AclI AACGTT 1 cut(s) 2393
AcoI YGGCCR 2 cut(s) 473, 619
AcsI RAATTY 8 cut(s) 209, 509, 593, 1365, 1693, 2209, 2488, 3465
AcuI CTGAAG 8 cut(s) 164, 1473, 1749, 2022, 2835, 3278, 3743, 3812
AcyI GRCGYC 1 cut(s) 3750
AdeI CACNNNGTG 2 cut(s) 2561, 2595
AfeI AGCGCT 2 cut(s) 829, 1657
AfiI CCNNNNNNNGG 4 cut(s) 482, 1144, 3152, 3175
AflIII ACRYGT 1 cut(s) 847
AgeI ACCGGT 2 cut(s) 189, 2083
AhdI GACNNNNNGTC 2 cut(s) 82, 2580
AhlI ACTAGT 1 cut(s) 332
AjnI CCWGG 5 cut(s) 475, 1444, 1813, 2016, 2524
AjuI GAANNNNNNNTTGG 6 cut(s) 1335, 1367, 2252, 2284, 3803, 3835
AleI CACNNNNGTG 1 cut(s) 912
Alw21I GWGCWC 2 cut(s) 1123, 2522
Alw26I GTCTC 5 cut(s) 53, 1195, 1239, 2588, 3927
AlwNI CAGNNNCTG 2 cut(s) 2441, 2813
Ama87I CYCGRG 2 cut(s) 1500, 3213
Aor51HI AGCGCT 2 cut(s) 829, 1657
AoxI GGCC 8 cut(s) 69, 473, 619, 773, 945, 2615, 2964, 3057
ApeKI GCWGC 8 cut(s) 917, 1300, 1568, 1994, 2254, 2532, 3362, 3803
ApoI RAATTY 8 cut(s) 209, 509, 593, 1365, 1693, 2209, 2488, 3465
ArsI GACNNNNNNTTYG 2 cut(s) 3725, 3757
AseI ATTAAT 4 cut(s) 285, 744, 837, 1008
AsiGI ACCGGT 2 cut(s) 189, 2083
Asp700I GAANNNNTTC 1 cut(s) 3892
AspLEI GCGC 5 cut(s) 830, 862, 1658, 2142, 3722
AspS9I GGNCC 6 cut(s) 127, 945, 1292, 2965, 3401, 3867
AsuHPI GGTGA 8 cut(s) 880, 1352, 1483, 1505, 2514, 2801, 3108, 3517
AsuII TTCGAA 1 cut(s) 205
AsuNHI GCTAGC 3 cut(s) 499, 1396, 3833
AvaI CYCGRG 2 cut(s) 1500, 3213
AvaII GGWCC 4 cut(s) 127, 1292, 3401, 3867
BalI TGGCCA 1 cut(s) 621
BanII GRGCYC 2 cut(s) 159, 567
Bbv12I GWGCWC 2 cut(s) 1123, 2522
BbvCI CCTCAGC 2 cut(s) 2612, 2961
BbvI GCAGC 8 cut(s) 904, 1312, 1555, 1981, 2241, 2544, 3374, 3815
BceAI ACGGC 2 cut(s) 1982, 3044
BciT130I CCWGG 5 cut(s) 477, 1446, 1815, 2018, 2526
BclI TGATCA 1 cut(s) 685
BcoDI GTCTC 5 cut(s) 53, 1195, 1239, 2588, 3927
BcuI ACTAGT 1 cut(s) 332
BfmI CTRYAG 4 cut(s) 1644, 2255, 3380, 3801
BfoI RGCGCY 2 cut(s) 831, 1659
BfuAI ACCTGC 2 cut(s) 899, 3166
BglI GCCNNNNNGGC 1 cut(s) 68
BglII AGATCT 1 cut(s) 3121
BisI GCNGC 9 cut(s) 918, 1301, 1569, 1995, 2255, 2409, 2533, 3363, 3804
BlpI GCTNAGC 1 cut(s) 1982
BlsI GCNGC 9 cut(s) 919, 1302, 1570, 1996, 2256, 2410, 2534, 3364, 3805
BmcAI AGTACT 2 cut(s) 1552, 1669
Bme1390I CCNGG 5 cut(s) 477, 1446, 1815, 2018, 2526
Bme18I GGWCC 4 cut(s) 127, 1292, 3401, 3867
BmeRI GACNNNNNGTC 2 cut(s) 82, 2580
BmeT110I CYCGRG 2 cut(s) 1500, 3213
BmgT120I GGNCC 6 cut(s) 127, 945, 1292, 2965, 3401, 3867
BmiI GGNNCC 6 cut(s) 158, 556, 698, 946, 2475, 2600
BmrFI CCNGG 5 cut(s) 477, 1446, 1815, 2018, 2526
BmrI ACTGGG 1 cut(s) 864
BmtI GCTAGC 3 cut(s) 503, 1400, 3837
BmuI ACTGGG 1 cut(s) 864
BplI GAGNNNNNCTC 2 cut(s) 3641, 3673
BpmI CTGGAG 7 cut(s) 987, 1467, 2196, 2693, 2859, 3399, 3753
Bpu10I CCTNAGC 2 cut(s) 2612, 2961
Bpu1102I GCTNAGC 1 cut(s) 1982
Bpu14I TTCGAA 1 cut(s) 205
BpuEI CTTGAG 8 cut(s) 434, 808, 970, 978, 1320, 1360, 1820, 2562
BsaAI YACGTR 2 cut(s) 250, 3101
BsaBI GATNNNNATC 3 cut(s) 1584, 2916, 3434
BsaHI GRCGYC 1 cut(s) 3750
BsaI GGTCTC 1 cut(s) 2588
BsaJI CCNNGG 5 cut(s) 923, 1814, 2243, 3439, 3863
BsaWI WCCGGW 4 cut(s) 189, 199, 2083, 3841
BsaXI ACNNNNNCTCC 6 cut(s) 960, 990, 1543, 1573, 2501, 2531
Bsc4I CCNNNNNNNGG 4 cut(s) 482, 1144, 3152, 3175
Bse118I RCCGGY 3 cut(s) 189, 307, 2083
Bse3DI GCAATG 2 cut(s) 2306, 2733
Bse8I GATNNNNATC 3 cut(s) 1584, 2916, 3434
BseBI CCWGG 5 cut(s) 477, 1446, 1815, 2018, 2526
BseDI CCNNGG 5 cut(s) 923, 1814, 2243, 3439, 3863
BseJI GATNNNNATC 3 cut(s) 1584, 2916, 3434
BseLI CCNNNNNNNGG 4 cut(s) 482, 1144, 3152, 3175
BseMI GCAATG 2 cut(s) 2306, 2733
BseRI GAGGAG 4 cut(s) 1070, 1290, 1991, 2896
BseXI GCAGC 8 cut(s) 904, 1312, 1555, 1981, 2241, 2544, 3374, 3815
BseYI CCCAGC 1 cut(s) 2967
BsgI GTGCAG 5 cut(s) 903, 1319, 1554, 2679, 3612
Bsh1236I CGCG 5 cut(s) 23, 44, 2140, 2628, 3722
Bsh1285I CGRYCG 2 cut(s) 97, 190
BshFI GGCC 8 cut(s) 71, 475, 621, 775, 947, 2617, 2966, 3059
BshTI ACCGGT 2 cut(s) 189, 2083
BsiEI CGRYCG 2 cut(s) 97, 190
BsiHKAI GWGCWC 2 cut(s) 1123, 2522
BsiHKCI CYCGRG 2 cut(s) 1500, 3213
BsiSI CCGG 5 cut(s) 190, 200, 308, 2084, 3842
BslFI GGGAC 3 cut(s) 596, 1945, 2307
BslI CCNNNNNNNGG 4 cut(s) 482, 1144, 3152, 3175
BsmAI GTCTC 5 cut(s) 53, 1195, 1239, 2588, 3927
BsmFI GGGAC 3 cut(s) 596, 1945, 2307
BsmI GAATGC 4 cut(s) 779, 2410, 2860, 3010
BsnI GGCC 8 cut(s) 71, 475, 621, 775, 947, 2617, 2966, 3059
Bso31I GGTCTC 1 cut(s) 2588
BsoBI CYCGRG 2 cut(s) 1500, 3213
Bsp119I TTCGAA 1 cut(s) 205
Bsp1286I GDGCHC 4 cut(s) 159, 567, 1123, 2522
Bsp1407I TGTACA 3 cut(s) 902, 1422, 2999
Bsp1720I GCTNAGC 1 cut(s) 1982
Bsp19I CCATGG 2 cut(s) 2243, 3439
Bsp68I TCGCGA 2 cut(s) 23, 44
BspACI CCGC 9 cut(s) 483, 928, 1349, 1491, 1964, 2408, 2626, 2971, 3929
BspANI GGCC 8 cut(s) 71, 475, 621, 775, 947, 2617, 2966, 3059
BspFNI CGCG 5 cut(s) 23, 44, 2140, 2628, 3722
BspHI TCATGA 2 cut(s) 574, 1783
BspLI GGNNCC 6 cut(s) 158, 556, 698, 946, 2475, 2600
BspMAI CTGCAG 2 cut(s) 2259, 3805
BspMI ACCTGC 2 cut(s) 899, 3166
BspOI GCTAGC 3 cut(s) 503, 1400, 3837
BspT104I TTCGAA 1 cut(s) 205
BspTNI GGTCTC 1 cut(s) 2588
BsrDI GCAATG 2 cut(s) 2306, 2733
BsrFI RCCGGY 3 cut(s) 189, 307, 2083
BsrGI TGTACA 3 cut(s) 902, 1422, 2999
BssAI RCCGGY 3 cut(s) 189, 307, 2083
BssECI CCNNGG 5 cut(s) 923, 1814, 2243, 3439, 3863
BssNI GRCGYC 1 cut(s) 3750
BssT1I CCWWGG 3 cut(s) 2243, 3439, 3863
Bst2UI CCWGG 5 cut(s) 477, 1446, 1815, 2018, 2526
Bst6I CTCTTC 6 cut(s) 176, 764, 2337, 3300, 3411, 3788
BstACI GRCGYC 1 cut(s) 3750
BstAPI GCANNNNNTGC 2 cut(s) 3181, 3501
BstAUI TGTACA 3 cut(s) 902, 1422, 2999
BstBAI YACGTR 2 cut(s) 250, 3101
BstBI TTCGAA 1 cut(s) 205
BstDSI CCRYGG 3 cut(s) 923, 2243, 3439
BstENI CCTNNNNNAGG 2 cut(s) 1142, 3173
BstFNI CGCG 5 cut(s) 23, 44, 2140, 2628, 3722
BstH2I RGCGCY 2 cut(s) 831, 1659
BstHHI GCGC 5 cut(s) 830, 862, 1658, 2142, 3722
BstMAI GTCTC 5 cut(s) 53, 1195, 1239, 2588, 3927
BstMCI CGRYCG 2 cut(s) 97, 190
BstNI CCWGG 5 cut(s) 477, 1446, 1815, 2018, 2526
BstNSI RCATGY 3 cut(s) 851, 2518, 3495
BstSCI CCNGG 5 cut(s) 475, 1444, 1813, 2016, 2524
BstSFI CTRYAG 4 cut(s) 1644, 2255, 3380, 3801
BstSNI TACGTA 1 cut(s) 3101
BstUI CGCG 5 cut(s) 23, 44, 2140, 2628, 3722
BstV1I GCAGC 8 cut(s) 904, 1312, 1555, 1981, 2241, 2544, 3374, 3815
BstX2I RGATCY 2 cut(s) 3121, 3651
BstXI CCANNNNNNTGG 1 cut(s) 3699
BstYI RGATCY 2 cut(s) 3121, 3651
BsuRI GGCC 8 cut(s) 71, 475, 621, 775, 947, 2617, 2966, 3059
BtgI CCRYGG 3 cut(s) 923, 2243, 3439
BtuMI TCGCGA 2 cut(s) 23, 44
BveI ACCTGC 2 cut(s) 899, 3166
CaiI CAGNNNCTG 2 cut(s) 2441, 2813
CciI TCATGA 2 cut(s) 574, 1783
CfoI GCGC 5 cut(s) 830, 862, 1658, 2142, 3722
Cfr10I RCCGGY 3 cut(s) 189, 307, 2083
Cfr13I GGNCC 6 cut(s) 127, 945, 1292, 2965, 3401, 3867
CseI GACGC 1 cut(s) 3739
CspAI ACCGGT 2 cut(s) 189, 2083
DraIII CACNNNGTG 2 cut(s) 2561, 2595
DrdI GACNNNNNNGTC 1 cut(s) 45
DriI GACNNNNNGTC 2 cut(s) 82, 2580
DseDI GACNNNNNNGTC 1 cut(s) 45
EaeI YGGCCR 2 cut(s) 473, 619
Eam1104I CTCTTC 6 cut(s) 176, 764, 2337, 3300, 3411, 3788
Eam1105I GACNNNNNGTC 2 cut(s) 82, 2580
EarI CTCTTC 6 cut(s) 176, 764, 2337, 3300, 3411, 3788
Eco105I TACGTA 1 cut(s) 3101
Eco130I CCWWGG 3 cut(s) 2243, 3439, 3863
Eco147I AGGCCT 2 cut(s) 775, 2617
Eco24I GRGCYC 2 cut(s) 159, 567
Eco31I GGTCTC 1 cut(s) 2588
Eco32I GATATC 1 cut(s) 2902
Eco47I GGWCC 4 cut(s) 127, 1292, 3401, 3867
Eco47III AGCGCT 2 cut(s) 829, 1657
Eco57I CTGAAG 8 cut(s) 164, 1473, 1749, 2022, 2835, 3278, 3743, 3812
Eco88I CYCGRG 2 cut(s) 1500, 3213
EcoNI CCTNNNNNAGG 2 cut(s) 1142, 3173
EcoO109I RGGNCCY 1 cut(s) 945
EcoRI GAATTC 1 cut(s) 3465
EcoRII CCWGG 5 cut(s) 475, 1444, 1813, 2016, 2524
EcoRV GATATC 1 cut(s) 2902
EcoT14I CCWWGG 3 cut(s) 2243, 3439, 3863
EcoT22I ATGCAT 1 cut(s) 3493
EcoT38I GRGCYC 2 cut(s) 159, 567
ErhI CCWWGG 3 cut(s) 2243, 3439, 3863
FalI AAGNNNNNCTT 2 cut(s) 2252, 2284
FaqI GGGAC 3 cut(s) 596, 1945, 2307
FauI CCCGC 3 cut(s) 476, 921, 3922
FbaI TGATCA 1 cut(s) 685
Fnu4HI GCNGC 9 cut(s) 918, 1301, 1569, 1995, 2255, 2409, 2533, 3363, 3804
FriOI GRGCYC 2 cut(s) 159, 567
Fsp4HI GCNGC 9 cut(s) 918, 1301, 1569, 1995, 2255, 2409, 2533, 3363, 3804
GlaI GCGC 5 cut(s) 829, 861, 1657, 2141, 3721
GluI GCNGC 9 cut(s) 918, 1301, 1569, 1995, 2255, 2409, 2533, 3363, 3804
GsaI CCCAGC 1 cut(s) 2971
GsuI CTGGAG 7 cut(s) 987, 1467, 2196, 2693, 2859, 3399, 3753
HaeII RGCGCY 2 cut(s) 831, 1659
HaeIII GGCC 8 cut(s) 71, 475, 621, 775, 947, 2617, 2966, 3059
HapII CCGG 5 cut(s) 190, 200, 308, 2084, 3842
HgaI GACGC 1 cut(s) 3739
HhaI GCGC 5 cut(s) 830, 862, 1658, 2142, 3722
Hin1I GRCGYC 1 cut(s) 3750
Hin6I GCGC 5 cut(s) 828, 860, 1656, 2140, 3720
HinP1I GCGC 5 cut(s) 828, 860, 1656, 2140, 3720
HincII GTYRAC 2 cut(s) 1763, 2304
HindII GTYRAC 2 cut(s) 1763, 2304
HindIII AAGCTT 2 cut(s) 996, 2714
HpaII CCGG 5 cut(s) 190, 200, 308, 2084, 3842
HphI GGTGA 8 cut(s) 880, 1352, 1483, 1505, 2514, 2801, 3108, 3517
Hpy166II GTNNAC 8 cut(s) 386, 905, 1292, 1474, 1715, 1763, 2183, 2304
Hpy8I GTNNAC 8 cut(s) 386, 905, 1292, 1474, 1715, 1763, 2183, 2304
Hpy99I CGWCG 1 cut(s) 88
HpyCH4IV ACGT 5 cut(s) 249, 1700, 2393, 2698, 3100
HpySE526I ACGT 5 cut(s) 249, 1700, 2393, 2698, 3100
Hsp92I GRCGYC 1 cut(s) 3750
HspAI GCGC 5 cut(s) 828, 860, 1656, 2140, 3720
Ksp22I TGATCA 1 cut(s) 685
LmnI GCTCC 8 cut(s) 162, 560, 1118, 1448, 1978, 2201, 2598, 3418
Lsp1109I GCAGC 8 cut(s) 904, 1312, 1555, 1981, 2241, 2544, 3374, 3815
MaeII ACGT 5 cut(s) 249, 1700, 2393, 2698, 3100
MaeIII GTNAC 9 cut(s) 719, 850, 1133, 1912, 2572, 2888, 3080, 3114, 3481
MfeI CAATTG 5 cut(s) 651, 759, 2760, 2955, 3557
MflI RGATCY 2 cut(s) 3121, 3651
MhlI GDGCHC 4 cut(s) 159, 567, 1123, 2522
MlsI TGGCCA 1 cut(s) 621
MluNI TGGCCA 1 cut(s) 621
MlyI GAGTC 6 cut(s) 33, 50, 55, 425, 2569, 3989
MmeI TCCRAC 4 cut(s) 54, 154, 210, 619
Mox20I TGGCCA 1 cut(s) 621
Mph1103I ATGCAT 1 cut(s) 3493
MroXI GAANNNNTTC 1 cut(s) 3892
MscI TGGCCA 1 cut(s) 621
MslI CAYNNNNRTG 5 cut(s) 14, 221, 393, 912, 2865
Msp20I TGGCCA 1 cut(s) 621
MspA1I CMGCKG 5 cut(s) 1964, 2543, 2879, 2971, 3419
MspI CCGG 5 cut(s) 190, 200, 308, 2084, 3842
MspR9I CCNGG 5 cut(s) 477, 1446, 1815, 2018, 2526
MunI CAATTG 5 cut(s) 651, 759, 2760, 2955, 3557
Mva1269I GAATGC 4 cut(s) 779, 2410, 2860, 3010
MvaI CCWGG 5 cut(s) 477, 1446, 1815, 2018, 2526
MvnI CGCG 5 cut(s) 23, 44, 2140, 2628, 3722
NcoI CCATGG 2 cut(s) 2243, 3439
NheI GCTAGC 3 cut(s) 499, 1396, 3833
NlaIV GGNNCC 6 cut(s) 158, 556, 698, 946, 2475, 2600
NmuCI GTSAC 6 cut(s) 850, 1133, 2572, 3080, 3114, 3481
NruI TCGCGA 2 cut(s) 23, 44
NsiI ATGCAT 1 cut(s) 3493
NspI RCATGY 3 cut(s) 851, 2518, 3495
NspV TTCGAA 1 cut(s) 205
OliI CACNNNNGTG 1 cut(s) 912
PacI TTAATTAA 1 cut(s) 285
PaeI GCATGC 1 cut(s) 3495
PaeR7I CTCGAG 2 cut(s) 1500, 3213
PagI TCATGA 2 cut(s) 574, 1783
PaqCI CACCTGC 1 cut(s) 899
PceI AGGCCT 2 cut(s) 775, 2617
PciI ACATGT 1 cut(s) 847
PctI GAATGC 4 cut(s) 779, 2410, 2860, 3010
PdmI GAANNNNTTC 1 cut(s) 3892
PfoI TCCNGGA 1 cut(s) 1444
PinAI ACCGGT 2 cut(s) 189, 2083
PkrI GCNGC 9 cut(s) 919, 1302, 1570, 1996, 2256, 2410, 2534, 3364, 3805
PleI GAGTC 6 cut(s) 33, 50, 54, 424, 2569, 3988
PpsI GAGTC 6 cut(s) 33, 50, 54, 424, 2569, 3988
Ppu21I YACGTR 2 cut(s) 250, 3101
PscI ACATGT 1 cut(s) 847
PshBI ATTAAT 4 cut(s) 285, 744, 837, 1008
PsiI TTATAA 2 cut(s) 2207, 3644
Psp1406I AACGTT 1 cut(s) 2393
Psp6I CCWGG 5 cut(s) 475, 1444, 1813, 2016, 2524
PspFI CCCAGC 1 cut(s) 2967
PspGI CCWGG 5 cut(s) 475, 1444, 1813, 2016, 2524
PspN4I GGNNCC 6 cut(s) 158, 556, 698, 946, 2475, 2600
PspPI GGNCC 6 cut(s) 127, 945, 1292, 2965, 3401, 3867
PstI CTGCAG 2 cut(s) 2259, 3805
PstNI CAGNNNCTG 2 cut(s) 2441, 2813
PsuI RGATCY 2 cut(s) 3121, 3651
PvuII CAGCTG 3 cut(s) 2543, 2879, 3419
RruI TCGCGA 2 cut(s) 23, 44
RseI CAYNNNNRTG 5 cut(s) 14, 221, 393, 912, 2865
SatI GCNGC 9 cut(s) 918, 1301, 1569, 1995, 2255, 2409, 2533, 3363, 3804
Sau96I GGNCC 6 cut(s) 127, 945, 1292, 2965, 3401, 3867
ScaI AGTACT 2 cut(s) 1552, 1669
SchI GAGTC 6 cut(s) 33, 50, 55, 425, 2569, 3989
ScrFI CCNGG 5 cut(s) 477, 1446, 1815, 2018, 2526
SduI GDGCHC 4 cut(s) 159, 567, 1123, 2522
SfcI CTRYAG 4 cut(s) 1644, 2255, 3380, 3801
Sfr274I CTCGAG 2 cut(s) 1500, 3213
SfuI TTCGAA 1 cut(s) 205
SinI GGWCC 4 cut(s) 127, 1292, 3401, 3867
SlaI CTCGAG 2 cut(s) 1500, 3213
SmiMI CAYNNNNRTG 5 cut(s) 14, 221, 393, 912, 2865
SnaBI TACGTA 1 cut(s) 3101
SpeI ACTAGT 1 cut(s) 332
SphI GCATGC 1 cut(s) 3495
SseBI AGGCCT 2 cut(s) 775, 2617
SsiI CCGC 9 cut(s) 483, 928, 1349, 1491, 1964, 2408, 2626, 2971, 3929
SspI AATATT 2 cut(s) 1225, 3285
StuI AGGCCT 2 cut(s) 775, 2617
StyD4I CCNGG 5 cut(s) 475, 1444, 1813, 2016, 2524
StyI CCWWGG 3 cut(s) 2243, 3439, 3863
TaiI ACGT 5 cut(s) 252, 1703, 2396, 2701, 3103
TaqII GACCGA 1 cut(s) 111
TatI WGTACW 6 cut(s) 902, 1422, 1550, 1667, 1945, 2999
TauI GCSGC 1 cut(s) 2411
TseFI GTSAC 6 cut(s) 850, 1133, 2572, 3080, 3114, 3481
TseI GCWGC 8 cut(s) 917, 1300, 1568, 1994, 2254, 2532, 3362, 3803
Tsp45I GTSAC 6 cut(s) 850, 1133, 2572, 3080, 3114, 3481
TspGWI ACGGA 1 cut(s) 1041
VpaK11BI GGWCC 4 cut(s) 127, 1292, 3401, 3867
VspI ATTAAT 4 cut(s) 285, 744, 837, 1008
XagI CCTNNNNNAGG 2 cut(s) 1142, 3173
XapI RAATTY 8 cut(s) 209, 509, 593, 1365, 1693, 2209, 2488, 3465
XbaI TCTAGA 1 cut(s) 1271
XceI RCATGY 3 cut(s) 851, 2518, 3495
XhoI CTCGAG 2 cut(s) 1500, 3213
XmnI GAANNNNTTC 1 cut(s) 3892
ZrmI AGTACT 2 cut(s) 1552, 1669
Zsp2I ATGCAT 1 cut(s) 3493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.