Domain of unknown function (DUF3453)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G01400 AT5G01400 AT5G01400 |
| fragaria_vesca | FvH4_6g11410 |
| malus_domestica | MD08G1209300.v1.1 MD12G1166800.v1.1 |
| prunus_persica | Prupe.6G277600_v2.0.a1 |
| pyrus_communis | pycom04g13880 pycom04g13890 pycom12g15880 |
| rosa_chinensis | RchiOBHm_Chr3g0463071 |
| rosa_laevigata | RLG00000024813 |
| rosa_multiflora | Rmu_co8095628.1_g000001 Rmu_sc0000766.1_g000036 Rmu_sc0008124.1_g000011 Rmu_sc0008124.1_g000012 Rmu_sc0008124.1_g000013 |
| rosa_roxburghii | Rroxscaffold_6G00416980 |
| rosa_rugosa | Rorug03G0061200 Rorug03G0061200 |
| rosa_samantha | Rh3AG119400 Rh3BG124000 Rh3CG125800 Rh3DG124900 |
| rosa_wichuraiana | Rw3G010100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1380, 3419 |
| Acc16I | TGCGCA | 1 cut(s) | 3496 |
| Acc36I | ACCTGC | 3 cut(s) | 562, 1402, 2941 |
| AccBSI | CCGCTC | 1 cut(s) | 2746 |
| AccI | GTMKAC | 1 cut(s) | 163 |
| AciI | CCGC | 9 cut(s) | 261, 396, 1124, 1269, 1712, 1918, 2723, 2746, 2834 |
| AclWI | GGATC | 7 cut(s) | 317, 590, 2352, 2605, 3169, 3218, 3421 |
| AcoI | YGGCCR | 2 cut(s) | 978, 1740 |
| AcsI | RAATTY | 5 cut(s) | 287, 371, 421, 2266, 3240 |
| AcuI | CTGAAG | 6 cut(s) | 140, 1248, 3053, 3216, 3509, 3518 |
| AcvI | CACGTG | 1 cut(s) | 28 |
| AcyI | GRCGYC | 2 cut(s) | 930, 1373 |
| AdeI | CACNNNGTG | 1 cut(s) | 962 |
| AfaI | GTAC | 8 cut(s) | 682, 1314, 1330, 1447, 2334, 2368, 2878, 3373 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 260, 2927, 2950 |
| AflIII | ACRYGT | 2 cut(s) | 625, 1194 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2358 |
| AhlI | ACTAGT | 2 cut(s) | 110, 2869 |
| AjnI | CCWGG | 7 cut(s) | 253, 294, 687, 1219, 1591, 2021, 3120 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1110, 1142, 3578, 3610 |
| AleI | CACNNNNGTG | 1 cut(s) | 690 |
| Alw21I | GWGCWC | 3 cut(s) | 640, 898, 2777 |
| Alw26I | GTCTC | 7 cut(s) | 495, 634, 970, 1014, 1517, 1548, 2366 |
| Alw44I | GTGCAC | 1 cut(s) | 2773 |
| AlwI | GGATC | 7 cut(s) | 317, 590, 2352, 2605, 3169, 3218, 3421 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1634, 1714, 2591 |
| AoxI | GGCC | 5 cut(s) | 762, 978, 1740, 1857, 2393 |
| ApaLI | GTGCAC | 1 cut(s) | 2773 |
| ApoI | RAATTY | 5 cut(s) | 287, 371, 421, 2266, 3240 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3500, 3532 |
| AseI | ATTAAT | 4 cut(s) | 63, 522, 615, 786 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 303, 3667 |
| AspLEI | GCGC | 2 cut(s) | 1100, 3497 |
| AspS9I | GGNCC | 3 cut(s) | 1067, 1858, 3176 |
| AsuC2I | CCSGG | 1 cut(s) | 1862 |
| AsuHPI | GGTGA | 9 cut(s) | 677, 1070, 1127, 1283, 1439, 1494, 1509, 2258, 2712 |
| AsuII | TTCGAA | 2 cut(s) | 1969, 2642 |
| AsuNHI | GCTAGC | 2 cut(s) | 1171, 3608 |
| AvaII | GGWCC | 2 cut(s) | 1067, 3176 |
| BaeGI | GKGCMC | 1 cut(s) | 2777 |
| BanII | GRGCYC | 3 cut(s) | 345, 840, 2888 |
| BauI | CACGAG | 4 cut(s) | 1278, 2066, 2075, 2892 |
| BbrPI | CACGTG | 1 cut(s) | 28 |
| BbsI | GAAGAC | 1 cut(s) | 933 |
| Bbv12I | GWGCWC | 3 cut(s) | 640, 898, 2777 |
| BbvCI | CCTCAGC | 3 cut(s) | 918, 1176, 2390 |
| BccI | CCATC | 9 cut(s) | 737, 1180, 1738, 1839, 2263, 2402, 2588, 2966, 3230 |
| BceAI | ACGGC | 1 cut(s) | 37 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1632, 1666, 2394, 2428 |
| BciT130I | CCWGG | 7 cut(s) | 255, 296, 689, 1221, 1593, 2023, 3122 |
| BciVI | GTATCC | 1 cut(s) | 615 |
| BclI | TGATCA | 1 cut(s) | 463 |
| BcnI | CCSGG | 1 cut(s) | 1862 |
| BcoDI | GTCTC | 7 cut(s) | 495, 634, 970, 1014, 1517, 1548, 2366 |
| BcuI | ACTAGT | 2 cut(s) | 110, 2869 |
| BfmI | CTRYAG | 4 cut(s) | 2033, 2429, 3155, 3576 |
| BfuAI | ACCTGC | 3 cut(s) | 562, 1402, 2941 |
| BfuI | GTATCC | 1 cut(s) | 615 |
| BglII | AGATCT | 1 cut(s) | 2896 |
| BlpI | GCTNAGC | 1 cut(s) | 1760 |
| BmcAI | AGTACT | 2 cut(s) | 1330, 2368 |
| Bme1390I | CCNGG | 8 cut(s) | 255, 296, 689, 1221, 1593, 1862, 2023, 3122 |
| Bme18I | GGWCC | 2 cut(s) | 1067, 3176 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2358 |
| BmgT120I | GGNCC | 3 cut(s) | 1067, 1858, 3176 |
| BmiI | GGNNCC | 7 cut(s) | 334, 476, 837, 1860, 1960, 2253, 2378 |
| BmrFI | CCNGG | 8 cut(s) | 255, 296, 689, 1221, 1593, 1862, 2023, 3122 |
| BmtI | GCTAGC | 2 cut(s) | 1175, 3612 |
| BpiI | GAAGAC | 1 cut(s) | 933 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3416, 3448 |
| BpmI | CTGGAG | 5 cut(s) | 801, 1242, 2471, 2637, 3174 |
| Bpu10I | CCTNAGC | 4 cut(s) | 918, 1110, 1176, 2390 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1760 |
| Bpu14I | TTCGAA | 2 cut(s) | 1969, 2642 |
| BpuEI | CTTGAG | 5 cut(s) | 212, 996, 1135, 2340, 2973 |
| BpuMI | CCSGG | 1 cut(s) | 1862 |
| BsaAI | YACGTR | 2 cut(s) | 28, 626 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1362, 3209 |
| BsaHI | GRCGYC | 2 cut(s) | 930, 1373 |
| BsaI | GGTCTC | 1 cut(s) | 2366 |
| BsaWI | WCCGGW | 2 cut(s) | 898, 3704 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 260, 2927, 2950 |
| Bse118I | RCCGGY | 1 cut(s) | 85 |
| Bse1I | ACTGG | 5 cut(s) | 773, 818, 1492, 1677, 3411 |
| Bse3DI | GCAATG | 2 cut(s) | 2511, 3277 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1362, 3209 |
| BseBI | CCWGG | 7 cut(s) | 255, 296, 689, 1221, 1593, 2023, 3122 |
| BseGI | GGATG | 7 cut(s) | 216, 400, 928, 1643, 1669, 1869, 3164 |
| BseJI | GATNNNNATC | 2 cut(s) | 1362, 3209 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 260, 2927, 2950 |
| BseMI | GCAATG | 2 cut(s) | 2511, 3277 |
| BseNI | ACTGG | 5 cut(s) | 773, 818, 1492, 1677, 3411 |
| BseRI | GAGGAG | 3 cut(s) | 848, 1769, 2671 |
| BseSI | GKGCMC | 1 cut(s) | 2777 |
| BseX3I | CGGCCG | 1 cut(s) | 1740 |
| BseYI | CCCAGC | 2 cut(s) | 346, 3544 |
| BsgI | GTGCAG | 5 cut(s) | 681, 1094, 1332, 2457, 3387 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1743 |
| BshFI | GGCC | 5 cut(s) | 764, 980, 1742, 1859, 2395 |
| BsiEI | CGRYCG | 1 cut(s) | 1743 |
| BsiHKAI | GWGCWC | 3 cut(s) | 640, 898, 2777 |
| BsiSI | CCGG | 5 cut(s) | 86, 899, 1862, 2924, 3705 |
| BslFI | GGGAC | 1 cut(s) | 2085 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 260, 2927, 2950 |
| BsmAI | GTCTC | 7 cut(s) | 495, 634, 970, 1014, 1517, 1548, 2366 |
| BsmBI | CGTCTC | 2 cut(s) | 1517, 1548 |
| BsmFI | GGGAC | 1 cut(s) | 2085 |
| BsnI | GGCC | 5 cut(s) | 764, 980, 1742, 1859, 2395 |
| Bso31I | GGTCTC | 1 cut(s) | 2366 |
| Bsp119I | TTCGAA | 2 cut(s) | 1969, 2642 |
| Bsp1286I | GDGCHC | 6 cut(s) | 345, 640, 840, 898, 2777, 2888 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1760 |
| Bsp19I | CCATGG | 2 cut(s) | 701, 3214 |
| BspACI | CCGC | 9 cut(s) | 261, 396, 1124, 1269, 1712, 1918, 2723, 2746, 2834 |
| BspANI | GGCC | 5 cut(s) | 764, 980, 1742, 1859, 2395 |
| BspHI | TCATGA | 1 cut(s) | 352 |
| BspLI | GGNNCC | 7 cut(s) | 334, 476, 837, 1860, 1960, 2253, 2378 |
| BspMAI | CTGCAG | 2 cut(s) | 2037, 3580 |
| BspMI | ACCTGC | 3 cut(s) | 562, 1402, 2941 |
| BspOI | GCTAGC | 2 cut(s) | 1175, 3612 |
| BspPI | GGATC | 7 cut(s) | 317, 590, 2352, 2605, 3169, 3218, 3421 |
| BspQI | GCTCTTC | 1 cut(s) | 1401 |
| BspT104I | TTCGAA | 2 cut(s) | 1969, 2642 |
| BspTNI | GGTCTC | 1 cut(s) | 2366 |
| BsrBI | CCGCTC | 1 cut(s) | 2746 |
| BsrDI | GCAATG | 2 cut(s) | 2511, 3277 |
| BsrFI | RCCGGY | 1 cut(s) | 85 |
| BsrI | ACTGG | 5 cut(s) | 773, 818, 1492, 1677, 3411 |
| BssAI | RCCGGY | 1 cut(s) | 85 |
| BssNI | GRCGYC | 2 cut(s) | 930, 1373 |
| BssSI | CACGAG | 4 cut(s) | 1278, 2066, 2075, 2892 |
| BssT1I | CCWWGG | 6 cut(s) | 701, 1765, 2007, 3214, 3594, 3638 |
| Bst2BI | CACGAG | 4 cut(s) | 1278, 2066, 2075, 2892 |
| Bst2UI | CCWGG | 7 cut(s) | 255, 296, 689, 1221, 1593, 2023, 3122 |
| Bst6I | CTCTTC | 6 cut(s) | 825, 1401, 1551, 1878, 3186, 3563 |
| BstACI | GRCGYC | 2 cut(s) | 930, 1373 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 644, 1106, 1714, 2956, 3272 |
| BstBAI | YACGTR | 2 cut(s) | 28, 626 |
| BstBI | TTCGAA | 2 cut(s) | 1969, 2642 |
| BstC8I | GCNNGC | 9 cut(s) | 97, 640, 762, 1173, 2844, 3268, 3384, 3610, 3715 |
| BstDSI | CCRYGG | 2 cut(s) | 701, 3214 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2948 |
| BstF5I | GGATG | 7 cut(s) | 216, 400, 928, 1643, 1669, 1869, 3164 |
| BstHHI | GCGC | 2 cut(s) | 1100, 3497 |
| BstMAI | GTCTC | 7 cut(s) | 495, 634, 970, 1014, 1517, 1548, 2366 |
| BstMCI | CGRYCG | 1 cut(s) | 1743 |
| BstNI | CCWGG | 7 cut(s) | 255, 296, 689, 1221, 1593, 2023, 3122 |
| BstNSI | RCATGY | 6 cut(s) | 1171, 1198, 1446, 2296, 3270, 3279 |
| BstSCI | CCNGG | 8 cut(s) | 253, 294, 687, 1219, 1591, 1860, 2021, 3120 |
| BstSFI | CTRYAG | 4 cut(s) | 2033, 2429, 3155, 3576 |
| BstSLI | GKGCMC | 1 cut(s) | 2777 |
| BstV2I | GAAGAC | 1 cut(s) | 933 |
| BstX2I | RGATCY | 2 cut(s) | 2896, 3426 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3474 |
| BstYI | RGATCY | 2 cut(s) | 2896, 3426 |
| BstZI | CGGCCG | 1 cut(s) | 1740 |
| BsuI | GTATCC | 1 cut(s) | 615 |
| BsuRI | GGCC | 5 cut(s) | 764, 980, 1742, 1859, 2395 |
| BtgI | CCRYGG | 2 cut(s) | 701, 3214 |
| BtsCI | GGATG | 7 cut(s) | 216, 400, 928, 1643, 1669, 1869, 3164 |
| BtsI | GCAGTG | 1 cut(s) | 2664 |
| BtsIMutI | CAGTG | 3 cut(s) | 2664, 2963, 3404 |
| BveI | ACCTGC | 3 cut(s) | 562, 1402, 2941 |
| Cac8I | GCNNGC | 9 cut(s) | 97, 640, 762, 1173, 2844, 3268, 3384, 3610, 3715 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1634, 1714, 2591 |
| CciI | TCATGA | 1 cut(s) | 352 |
| CfoI | GCGC | 2 cut(s) | 1100, 3497 |
| Cfr10I | RCCGGY | 1 cut(s) | 85 |
| Cfr13I | GGNCC | 3 cut(s) | 1067, 1858, 3176 |
| CseI | GACGC | 2 cut(s) | 938, 1362 |
| Csp6I | GTAC | 8 cut(s) | 681, 1313, 1329, 1446, 2333, 2367, 2877, 3372 |
| CviQI | GTAC | 8 cut(s) | 681, 1313, 1329, 1446, 2333, 2367, 2877, 3372 |
| DraIII | CACNNNGTG | 1 cut(s) | 962 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2358 |
| EaeI | YGGCCR | 2 cut(s) | 978, 1740 |
| EagI | CGGCCG | 1 cut(s) | 1740 |
| Eam1104I | CTCTTC | 6 cut(s) | 825, 1401, 1551, 1878, 3186, 3563 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2358 |
| EarI | CTCTTC | 6 cut(s) | 825, 1401, 1551, 1878, 3186, 3563 |
| EclXI | CGGCCG | 1 cut(s) | 1740 |
| Eco130I | CCWWGG | 6 cut(s) | 701, 1765, 2007, 3214, 3594, 3638 |
| Eco147I | AGGCCT | 1 cut(s) | 2395 |
| Eco24I | GRGCYC | 3 cut(s) | 345, 840, 2888 |
| Eco31I | GGTCTC | 1 cut(s) | 2366 |
| Eco32I | GATATC | 4 cut(s) | 1289, 1800, 2677, 3622 |
| Eco47I | GGWCC | 2 cut(s) | 1067, 3176 |
| Eco52I | CGGCCG | 1 cut(s) | 1740 |
| Eco57I | CTGAAG | 6 cut(s) | 140, 1248, 3053, 3216, 3509, 3518 |
| Eco72I | CACGTG | 1 cut(s) | 28 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2948 |
| EcoRI | GAATTC | 1 cut(s) | 3240 |
| EcoRII | CCWGG | 7 cut(s) | 253, 294, 687, 1219, 1591, 2021, 3120 |
| EcoRV | GATATC | 4 cut(s) | 1289, 1800, 2677, 3622 |
| EcoT14I | CCWWGG | 6 cut(s) | 701, 1765, 2007, 3214, 3594, 3638 |
| EcoT22I | ATGCAT | 4 cut(s) | 2827, 3268, 3277, 3565 |
| EcoT38I | GRGCYC | 3 cut(s) | 345, 840, 2888 |
| ErhI | CCWWGG | 6 cut(s) | 701, 1765, 2007, 3214, 3594, 3638 |
| Esp3I | CGTCTC | 2 cut(s) | 1517, 1548 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 291, 323 |
| FaqI | GGGAC | 1 cut(s) | 2085 |
| FauI | CCCGC | 1 cut(s) | 1925 |
| FbaI | TGATCA | 1 cut(s) | 463 |
| FblI | GTMKAC | 1 cut(s) | 163 |
| FokI | GGATG | 7 cut(s) | 223, 387, 935, 1630, 1676, 1856, 3151 |
| FriOI | GRGCYC | 3 cut(s) | 345, 840, 2888 |
| FspAI | RTGCGCAY | 1 cut(s) | 3496 |
| FspI | TGCGCA | 1 cut(s) | 3496 |
| GlaI | GCGC | 2 cut(s) | 1099, 3496 |
| GsaI | CCCAGC | 2 cut(s) | 350, 3548 |
| GsuI | CTGGAG | 5 cut(s) | 801, 1242, 2471, 2637, 3174 |
| HaeIII | GGCC | 5 cut(s) | 764, 980, 1742, 1859, 2395 |
| HapII | CCGG | 5 cut(s) | 86, 899, 1862, 2924, 3705 |
| HgaI | GACGC | 2 cut(s) | 938, 1362 |
| HhaI | GCGC | 2 cut(s) | 1100, 3497 |
| Hin1I | GRCGYC | 2 cut(s) | 930, 1373 |
| Hin6I | GCGC | 2 cut(s) | 1098, 3495 |
| HinP1I | GCGC | 2 cut(s) | 1098, 3495 |
| HincII | GTYRAC | 5 cut(s) | 729, 1789, 1827, 2082, 3504 |
| HindII | GTYRAC | 5 cut(s) | 729, 1789, 1827, 2082, 3504 |
| HindIII | AAGCTT | 1 cut(s) | 2492 |
| HpaII | CCGG | 5 cut(s) | 86, 899, 1862, 2924, 3705 |
| HphI | GGTGA | 9 cut(s) | 677, 1070, 1127, 1283, 1439, 1494, 1509, 2258, 2712 |
| Hpy99I | CGWCG | 1 cut(s) | 58 |
| HpyCH4IV | ACGT | 4 cut(s) | 27, 625, 2084, 2476 |
| HpySE526I | ACGT | 4 cut(s) | 27, 625, 2084, 2476 |
| Hsp92I | GRCGYC | 2 cut(s) | 930, 1373 |
| HspAI | GCGC | 2 cut(s) | 1098, 3495 |
| Ksp22I | TGATCA | 1 cut(s) | 463 |
| LguI | GCTCTTC | 1 cut(s) | 1401 |
| MaeII | ACGT | 4 cut(s) | 27, 625, 2084, 2476 |
| MaeIII | GTNAC | 7 cut(s) | 497, 1414, 2350, 2718, 2889, 3256, 3736 |
| MbiI | CCGCTC | 1 cut(s) | 2746 |
| MfeI | CAATTG | 6 cut(s) | 362, 429, 537, 2538, 2730, 3332 |
| MflI | RGATCY | 2 cut(s) | 2896, 3426 |
| MhlI | GDGCHC | 6 cut(s) | 345, 640, 840, 898, 2777, 2888 |
| MlyI | GAGTC | 8 cut(s) | 203, 1290, 1711, 2004, 2347, 2621, 3668, 3700 |
| MmeI | TCCRAC | 2 cut(s) | 159, 397 |
| Mph1103I | ATGCAT | 4 cut(s) | 2827, 3268, 3277, 3565 |
| MroXI | GAANNNNTTC | 2 cut(s) | 303, 3667 |
| MslI | CAYNNNNRTG | 3 cut(s) | 512, 690, 2643 |
| MspA1I | CMGCKG | 3 cut(s) | 1714, 1775, 3194 |
| MspI | CCGG | 5 cut(s) | 86, 899, 1862, 2924, 3705 |
| MspR9I | CCNGG | 8 cut(s) | 255, 296, 689, 1221, 1593, 1862, 2023, 3122 |
| MunI | CAATTG | 6 cut(s) | 362, 429, 537, 2538, 2730, 3332 |
| MvaI | CCWGG | 7 cut(s) | 255, 296, 689, 1221, 1593, 2023, 3122 |
| NciI | CCSGG | 1 cut(s) | 1862 |
| NcoI | CCATGG | 2 cut(s) | 701, 3214 |
| NheI | GCTAGC | 2 cut(s) | 1171, 3608 |
| NlaIV | GGNNCC | 7 cut(s) | 334, 476, 837, 1860, 1960, 2253, 2378 |
| NmeAIII | GCCGAG | 1 cut(s) | 2761 |
| NmuCI | GTSAC | 5 cut(s) | 2350, 2718, 2889, 3256, 3736 |
| NsbI | TGCGCA | 1 cut(s) | 3496 |
| NsiI | ATGCAT | 4 cut(s) | 2827, 3268, 3277, 3565 |
| NspI | RCATGY | 6 cut(s) | 1171, 1198, 1446, 2296, 3270, 3279 |
| NspV | TTCGAA | 2 cut(s) | 1969, 2642 |
| OliI | CACNNNNGTG | 1 cut(s) | 690 |
| PaeI | GCATGC | 1 cut(s) | 3270 |
| PagI | TCATGA | 1 cut(s) | 352 |
| PceI | AGGCCT | 1 cut(s) | 2395 |
| PciI | ACATGT | 1 cut(s) | 1194 |
| PciSI | GCTCTTC | 1 cut(s) | 1401 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 33, 2073 |
| PdmI | GAANNNNTTC | 2 cut(s) | 303, 3667 |
| PfoI | TCCNGGA | 2 cut(s) | 294, 1219 |
| PleI | GAGTC | 8 cut(s) | 202, 1289, 1710, 2003, 2347, 2621, 3668, 3699 |
| PmaCI | CACGTG | 1 cut(s) | 28 |
| PmlI | CACGTG | 1 cut(s) | 28 |
| PpsI | GAGTC | 8 cut(s) | 202, 1289, 1710, 2003, 2347, 2621, 3668, 3699 |
| Ppu21I | YACGTR | 2 cut(s) | 28, 626 |
| PscI | ACATGT | 1 cut(s) | 1194 |
| PshBI | ATTAAT | 4 cut(s) | 63, 522, 615, 786 |
| PsiI | TTATAA | 2 cut(s) | 1380, 3419 |
| Psp6I | CCWGG | 7 cut(s) | 253, 294, 687, 1219, 1591, 2021, 3120 |
| PspCI | CACGTG | 1 cut(s) | 28 |
| PspFI | CCCAGC | 2 cut(s) | 346, 3544 |
| PspGI | CCWGG | 7 cut(s) | 253, 294, 687, 1219, 1591, 2021, 3120 |
| PspN4I | GGNNCC | 7 cut(s) | 334, 476, 837, 1860, 1960, 2253, 2378 |
| PspPI | GGNCC | 3 cut(s) | 1067, 1858, 3176 |
| PstI | CTGCAG | 2 cut(s) | 2037, 3580 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1634, 1714, 2591 |
| PsuI | RGATCY | 2 cut(s) | 2896, 3426 |
| PvuII | CAGCTG | 2 cut(s) | 1775, 3194 |
| RsaI | GTAC | 8 cut(s) | 682, 1314, 1330, 1447, 2334, 2368, 2878, 3373 |
| RsaNI | GTAC | 8 cut(s) | 681, 1313, 1329, 1446, 2333, 2367, 2877, 3372 |
| RseI | CAYNNNNRTG | 3 cut(s) | 512, 690, 2643 |
| SapI | GCTCTTC | 1 cut(s) | 1401 |
| Sau96I | GGNCC | 3 cut(s) | 1067, 1858, 3176 |
| ScaI | AGTACT | 2 cut(s) | 1330, 2368 |
| SchI | GAGTC | 8 cut(s) | 203, 1290, 1711, 2004, 2347, 2621, 3668, 3700 |
| ScrFI | CCNGG | 8 cut(s) | 255, 296, 689, 1221, 1593, 1862, 2023, 3122 |
| SduI | GDGCHC | 6 cut(s) | 345, 640, 840, 898, 2777, 2888 |
| SfcI | CTRYAG | 4 cut(s) | 2033, 2429, 3155, 3576 |
| SfuI | TTCGAA | 2 cut(s) | 1969, 2642 |
| SinI | GGWCC | 2 cut(s) | 1067, 3176 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 512, 690, 2643 |
| SmlI | CTYRAG | 5 cut(s) | 191, 1011, 1150, 2355, 2988 |
| SmoI | CTYRAG | 5 cut(s) | 191, 1011, 1150, 2355, 2988 |
| SpeI | ACTAGT | 2 cut(s) | 110, 2869 |
| SphI | GCATGC | 1 cut(s) | 3270 |
| SseBI | AGGCCT | 1 cut(s) | 2395 |
| SsiI | CCGC | 9 cut(s) | 261, 396, 1124, 1269, 1712, 1918, 2723, 2746, 2834 |
| SspI | AATATT | 4 cut(s) | 234, 784, 1000, 2805 |
| StuI | AGGCCT | 1 cut(s) | 2395 |
| StyD4I | CCNGG | 8 cut(s) | 253, 294, 687, 1219, 1591, 1860, 2021, 3120 |
| StyI | CCWWGG | 6 cut(s) | 701, 1765, 2007, 3214, 3594, 3638 |
| TaiI | ACGT | 4 cut(s) | 30, 628, 2087, 2479 |
| TatI | WGTACW | 6 cut(s) | 680, 1312, 1328, 1445, 2332, 2366 |
| TauI | GCSGC | 1 cut(s) | 1714 |
| TscAI | CASTG | 3 cut(s) | 2664, 2970, 3411 |
| TseFI | GTSAC | 5 cut(s) | 2350, 2718, 2889, 3256, 3736 |
| Tsp45I | GTSAC | 5 cut(s) | 2350, 2718, 2889, 3256, 3736 |
| TspGWI | ACGGA | 5 cut(s) | 1530, 1539, 1541, 2490, 3755 |
| TspRI | CASTG | 3 cut(s) | 2664, 2970, 3411 |
| VneI | GTGCAC | 1 cut(s) | 2773 |
| VpaK11BI | GGWCC | 2 cut(s) | 1067, 3176 |
| VspI | ATTAAT | 4 cut(s) | 63, 522, 615, 786 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2948 |
| XapI | RAATTY | 5 cut(s) | 287, 371, 421, 2266, 3240 |
| XbaI | TCTAGA | 3 cut(s) | 139, 1354, 1681 |
| XceI | RCATGY | 6 cut(s) | 1171, 1198, 1446, 2296, 3270, 3279 |
| XmiI | GTMKAC | 1 cut(s) | 163 |
| XmnI | GAANNNNTTC | 2 cut(s) | 303, 3667 |
| ZrmI | AGTACT | 2 cut(s) | 1330, 2368 |
| Zsp2I | ATGCAT | 4 cut(s) | 2827, 3268, 3277, 3565 |