Belongs to the Casparian strip membrane proteins (CASP) family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38480 |
| fragaria_vesca | FvH4_6g10520 |
| malus_domestica | MD04G1167600.v1.1 MD12G1180900.v1.1 |
| prunus_persica | Prupe.6G285800_v2.0.a1 Prupe.6G285900_v2.0.a1 |
| pyrus_communis | pycom04g14880 pycom12g17050 |
| rosa_chinensis | RchiOBHm_Chr3g0461491 |
| rosa_laevigata | RLG00000024930 |
| rosa_multiflora | Rmu_sc0002677.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00418240 Rroxscaffold_6G00418570 |
| rosa_rugosa | Rorug03G0051200.1 |
| rosa_samantha | Rh3AG108900 Rh3BG112600 Rh3CG114300 Rh3DG114400 |
| rosa_wichuraiana | Rw3G009260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 218 |
| AccII | CGCG | 1 cut(s) | 379 |
| AciI | CCGC | 5 cut(s) | 53, 56, 59, 363, 561 |
| AclWI | GGATC | 4 cut(s) | 42, 55, 148, 161 |
| AcuI | CTGAAG | 1 cut(s) | 537 |
| AfaI | GTAC | 1 cut(s) | 359 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 127, 430 |
| AflIII | ACRYGT | 1 cut(s) | 18 |
| AgsI | TTSAA | 1 cut(s) | 304 |
| AjiI | CACGTC | 2 cut(s) | 21, 112 |
| AjnI | CCWGG | 1 cut(s) | 434 |
| AluBI | AGCT | 3 cut(s) | 324, 341, 584 |
| AluI | AGCT | 3 cut(s) | 324, 341, 584 |
| Alw21I | GWGCWC | 1 cut(s) | 42 |
| Alw26I | GTCTC | 1 cut(s) | 99 |
| AlwI | GGATC | 4 cut(s) | 42, 55, 148, 161 |
| AoxI | GGCC | 3 cut(s) | 237, 432, 573 |
| ApeKI | GCWGC | 4 cut(s) | 86, 160, 374, 557 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 414 |
| AspLEI | GCGC | 2 cut(s) | 379, 423 |
| AsuC2I | CCSGG | 1 cut(s) | 150 |
| AsuHPI | GGTGA | 1 cut(s) | 391 |
| BaeGI | GKGCMC | 1 cut(s) | 134 |
| BamHI | GGATCC | 2 cut(s) | 47, 153 |
| BbsI | GAAGAC | 3 cut(s) | 217, 285, 303 |
| Bbv12I | GWGCWC | 1 cut(s) | 42 |
| BbvI | GCAGC | 4 cut(s) | 73, 172, 386, 569 |
| BccI | CCATC | 1 cut(s) | 159 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 121, 155 |
| BciT130I | CCWGG | 1 cut(s) | 436 |
| BcnI | CCSGG | 1 cut(s) | 150 |
| BcoDI | GTCTC | 1 cut(s) | 99 |
| BfaI | CTAG | 1 cut(s) | 581 |
| BfmI | CTRYAG | 1 cut(s) | 158 |
| BfoI | RGCGCY | 1 cut(s) | 424 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 605 |
| BisI | GCNGC | 8 cut(s) | 56, 59, 87, 161, 364, 375, 558, 561 |
| BlsI | GCNGC | 8 cut(s) | 57, 60, 88, 162, 365, 376, 559, 562 |
| Bme1390I | CCNGG | 2 cut(s) | 150, 436 |
| BmgBI | CACGTC | 2 cut(s) | 21, 112 |
| BmiI | GGNNCC | 2 cut(s) | 49, 155 |
| BmrFI | CCNGG | 2 cut(s) | 150, 436 |
| BmsI | GCATC | 1 cut(s) | 342 |
| BpiI | GAAGAC | 3 cut(s) | 217, 285, 303 |
| BpuMI | CCSGG | 1 cut(s) | 150 |
| BsaBI | GATNNNNATC | 1 cut(s) | 530 |
| BsaJI | CCNNGG | 2 cut(s) | 149, 435 |
| BsaWI | WCCGGW | 2 cut(s) | 34, 617 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 127, 430 |
| Bse118I | RCCGGY | 2 cut(s) | 82, 401 |
| Bse3DI | GCAATG | 1 cut(s) | 504 |
| Bse8I | GATNNNNATC | 1 cut(s) | 530 |
| BseBI | CCWGG | 1 cut(s) | 436 |
| BseDI | CCNNGG | 2 cut(s) | 149, 435 |
| BseJI | GATNNNNATC | 1 cut(s) | 530 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 127, 430 |
| BseMI | GCAATG | 1 cut(s) | 504 |
| BseSI | GKGCMC | 1 cut(s) | 134 |
| BseXI | GCAGC | 4 cut(s) | 73, 172, 386, 569 |
| BsgI | GTGCAG | 2 cut(s) | 72, 89 |
| Bsh1236I | CGCG | 1 cut(s) | 379 |
| Bsh1285I | CGRYCG | 1 cut(s) | 35 |
| BshFI | GGCC | 3 cut(s) | 239, 434, 575 |
| BsiEI | CGRYCG | 1 cut(s) | 35 |
| BsiHKAI | GWGCWC | 1 cut(s) | 42 |
| BsiSI | CCGG | 5 cut(s) | 35, 83, 149, 402, 618 |
| BslFI | GGGAC | 1 cut(s) | 225 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 127, 430 |
| BsmAI | GTCTC | 1 cut(s) | 99 |
| BsmBI | CGTCTC | 1 cut(s) | 99 |
| BsmFI | GGGAC | 1 cut(s) | 225 |
| BsnI | GGCC | 3 cut(s) | 239, 434, 575 |
| Bsp1286I | GDGCHC | 2 cut(s) | 42, 134 |
| Bsp1407I | TGTACA | 1 cut(s) | 357 |
| Bsp143I | GATC | 3 cut(s) | 47, 153, 454 |
| BspACI | CCGC | 5 cut(s) | 53, 56, 59, 363, 561 |
| BspANI | GGCC | 3 cut(s) | 239, 434, 575 |
| BspFNI | CGCG | 1 cut(s) | 379 |
| BspLI | GGNNCC | 2 cut(s) | 49, 155 |
| BspMAI | CTGCAG | 1 cut(s) | 162 |
| BspPI | GGATC | 4 cut(s) | 42, 55, 148, 161 |
| BsrDI | GCAATG | 1 cut(s) | 504 |
| BsrFI | RCCGGY | 2 cut(s) | 82, 401 |
| BsrGI | TGTACA | 1 cut(s) | 357 |
| BssAI | RCCGGY | 2 cut(s) | 82, 401 |
| BssECI | CCNNGG | 2 cut(s) | 149, 435 |
| BssMI | GATC | 3 cut(s) | 47, 153, 454 |
| Bst2UI | CCWGG | 1 cut(s) | 436 |
| Bst4CI | ACNGT | 4 cut(s) | 93, 102, 216, 223 |
| Bst6I | CTCTTC | 3 cut(s) | 184, 401, 556 |
| BstAUI | TGTACA | 1 cut(s) | 357 |
| BstC8I | GCNNGC | 3 cut(s) | 42, 368, 372 |
| BstDEI | CTNAG | 1 cut(s) | 283 |
| BstFNI | CGCG | 1 cut(s) | 379 |
| BstH2I | RGCGCY | 1 cut(s) | 424 |
| BstHHI | GCGC | 2 cut(s) | 379, 423 |
| BstKTI | GATC | 3 cut(s) | 50, 156, 457 |
| BstMAI | GTCTC | 1 cut(s) | 99 |
| BstMBI | GATC | 3 cut(s) | 47, 153, 454 |
| BstMCI | CGRYCG | 1 cut(s) | 35 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 67, 83, 376, 440, 581, 590, 605 |
| BstNI | CCWGG | 1 cut(s) | 436 |
| BstSCI | CCNGG | 2 cut(s) | 148, 434 |
| BstSFI | CTRYAG | 1 cut(s) | 158 |
| BstSLI | GKGCMC | 1 cut(s) | 134 |
| BstUI | CGCG | 1 cut(s) | 379 |
| BstV1I | GCAGC | 4 cut(s) | 73, 172, 386, 569 |
| BstV2I | GAAGAC | 3 cut(s) | 217, 285, 303 |
| BstX2I | RGATCY | 2 cut(s) | 47, 153 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 571 |
| BstYI | RGATCY | 2 cut(s) | 47, 153 |
| BsuRI | GGCC | 3 cut(s) | 239, 434, 575 |
| BtgZI | GCGATG | 1 cut(s) | 178 |
| BtrI | CACGTC | 2 cut(s) | 21, 112 |
| Cac8I | GCNNGC | 3 cut(s) | 42, 368, 372 |
| CfoI | GCGC | 2 cut(s) | 379, 423 |
| Cfr10I | RCCGGY | 2 cut(s) | 82, 401 |
| Csp6I | GTAC | 1 cut(s) | 358 |
| CviAII | CATG | 2 cut(s) | 250, 571 |
| CviQI | GTAC | 1 cut(s) | 358 |
| DdeI | CTNAG | 1 cut(s) | 283 |
| DpnI | GATC | 3 cut(s) | 49, 155, 456 |
| DpnII | GATC | 3 cut(s) | 47, 153, 454 |
| Eam1104I | CTCTTC | 3 cut(s) | 184, 401, 556 |
| EarI | CTCTTC | 3 cut(s) | 184, 401, 556 |
| Eco57I | CTGAAG | 1 cut(s) | 537 |
| EcoRII | CCWGG | 1 cut(s) | 434 |
| Esp3I | CGTCTC | 1 cut(s) | 99 |
| FaeI | CATG | 2 cut(s) | 253, 574 |
| FaiI | YATR | 6 cut(s) | 251, 312, 327, 464, 469, 572 |
| FaqI | GGGAC | 1 cut(s) | 225 |
| FatI | CATG | 2 cut(s) | 249, 570 |
| FauI | CCCGC | 1 cut(s) | 60 |
| FblI | GTMKAC | 1 cut(s) | 218 |
| Fnu4HI | GCNGC | 8 cut(s) | 56, 59, 87, 161, 364, 375, 558, 561 |
| Fsp4HI | GCNGC | 8 cut(s) | 56, 59, 87, 161, 364, 375, 558, 561 |
| FspBI | CTAG | 1 cut(s) | 581 |
| GlaI | GCGC | 2 cut(s) | 378, 422 |
| GluI | GCNGC | 8 cut(s) | 56, 59, 87, 161, 364, 375, 558, 561 |
| HaeII | RGCGCY | 1 cut(s) | 424 |
| HaeIII | GGCC | 3 cut(s) | 239, 434, 575 |
| HapII | CCGG | 5 cut(s) | 35, 83, 149, 402, 618 |
| HhaI | GCGC | 2 cut(s) | 379, 423 |
| Hin1II | CATG | 2 cut(s) | 253, 574 |
| Hin6I | GCGC | 2 cut(s) | 377, 421 |
| HinP1I | GCGC | 2 cut(s) | 377, 421 |
| HinfI | GANTC | 3 cut(s) | 138, 179, 548 |
| HpaII | CCGG | 5 cut(s) | 35, 83, 149, 402, 618 |
| HphI | GGTGA | 1 cut(s) | 391 |
| Hpy166II | GTNNAC | 2 cut(s) | 219, 388 |
| Hpy188I | TCNGA | 4 cut(s) | 143, 295, 459, 650 |
| Hpy8I | GTNNAC | 2 cut(s) | 219, 388 |
| Hpy99I | CGWCG | 3 cut(s) | 25, 487, 496 |
| HpyAV | CCTTC | 2 cut(s) | 250, 586 |
| HpyCH4III | ACNGT | 4 cut(s) | 93, 102, 216, 223 |
| HpyCH4IV | ACGT | 2 cut(s) | 20, 111 |
| HpyCH4V | TGCA | 5 cut(s) | 70, 89, 160, 258, 370 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 67, 83, 376, 440, 581, 590, 605 |
| HpyF3I | CTNAG | 1 cut(s) | 283 |
| HpySE526I | ACGT | 2 cut(s) | 20, 111 |
| Hsp92II | CATG | 2 cut(s) | 253, 574 |
| HspAI | GCGC | 2 cut(s) | 377, 421 |
| Kzo9I | GATC | 3 cut(s) | 47, 153, 454 |
| LmnI | GCTCC | 2 cut(s) | 37, 82 |
| Lsp1109I | GCAGC | 4 cut(s) | 73, 172, 386, 569 |
| LweI | GCATC | 1 cut(s) | 342 |
| MaeI | CTAG | 1 cut(s) | 581 |
| MaeII | ACGT | 2 cut(s) | 20, 111 |
| MaeIII | GTNAC | 1 cut(s) | 620 |
| MalI | GATC | 3 cut(s) | 49, 155, 456 |
| MboI | GATC | 3 cut(s) | 47, 153, 454 |
| MboII | GAAGA | 8 cut(s) | 181, 201, 217, 290, 308, 326, 388, 543 |
| MflI | RGATCY | 2 cut(s) | 47, 153 |
| MhlI | GDGCHC | 2 cut(s) | 42, 134 |
| MluCI | AATT | 1 cut(s) | 626 |
| MlyI | GAGTC | 2 cut(s) | 173, 542 |
| MnlI | CCTC | 3 cut(s) | 169, 185, 499 |
| MroXI | GAANNNNTTC | 1 cut(s) | 414 |
| MslI | CAYNNNNRTG | 2 cut(s) | 248, 569 |
| MspA1I | CMGCKG | 1 cut(s) | 363 |
| MspI | CCGG | 5 cut(s) | 35, 83, 149, 402, 618 |
| MspR9I | CCNGG | 2 cut(s) | 150, 436 |
| MvaI | CCWGG | 1 cut(s) | 436 |
| MvnI | CGCG | 1 cut(s) | 379 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 67, 83, 376, 440, 581, 590, 605 |
| NciI | CCSGG | 1 cut(s) | 150 |
| NdeII | GATC | 3 cut(s) | 47, 153, 454 |
| NlaIII | CATG | 2 cut(s) | 253, 574 |
| NlaIV | GGNNCC | 2 cut(s) | 49, 155 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 488, 500 |
| PdmI | GAANNNNTTC | 1 cut(s) | 414 |
| PfeI | GAWTC | 1 cut(s) | 138 |
| PkrI | GCNGC | 8 cut(s) | 57, 60, 88, 162, 365, 376, 559, 562 |
| PleI | GAGTC | 2 cut(s) | 173, 542 |
| PpsI | GAGTC | 2 cut(s) | 173, 542 |
| Psp6I | CCWGG | 1 cut(s) | 434 |
| PspGI | CCWGG | 1 cut(s) | 434 |
| PspN4I | GGNNCC | 2 cut(s) | 49, 155 |
| PstI | CTGCAG | 1 cut(s) | 162 |
| PsuI | RGATCY | 2 cut(s) | 47, 153 |
| RsaI | GTAC | 1 cut(s) | 359 |
| RsaNI | GTAC | 1 cut(s) | 358 |
| RseI | CAYNNNNRTG | 2 cut(s) | 248, 569 |
| SatI | GCNGC | 8 cut(s) | 56, 59, 87, 161, 364, 375, 558, 561 |
| Sau3AI | GATC | 3 cut(s) | 47, 153, 454 |
| SchI | GAGTC | 2 cut(s) | 173, 542 |
| ScrFI | CCNGG | 2 cut(s) | 150, 436 |
| SduI | GDGCHC | 2 cut(s) | 42, 134 |
| SetI | ASST | 6 cut(s) | 10, 23, 114, 326, 343, 586 |
| SfaNI | GCATC | 1 cut(s) | 342 |
| SfcI | CTRYAG | 1 cut(s) | 158 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 248, 569 |
| Sse9I | AATT | 1 cut(s) | 626 |
| SsiI | CCGC | 5 cut(s) | 53, 56, 59, 363, 561 |
| SspMI | CTAG | 1 cut(s) | 581 |
| StyD4I | CCNGG | 2 cut(s) | 148, 434 |
| TaaI | ACNGT | 4 cut(s) | 93, 102, 216, 223 |
| TaiI | ACGT | 2 cut(s) | 23, 114 |
| TaqI | TCGA | 2 cut(s) | 350, 534 |
| TasI | AATT | 1 cut(s) | 626 |
| TatI | WGTACW | 1 cut(s) | 357 |
| TauI | GCSGC | 4 cut(s) | 58, 61, 366, 563 |
| TfiI | GAWTC | 1 cut(s) | 138 |
| TseI | GCWGC | 4 cut(s) | 86, 160, 374, 557 |
| TspDTI | ATGAA | 2 cut(s) | 232, 327 |
| XmiI | GTMKAC | 1 cut(s) | 218 |
| XmnI | GAANNNNTTC | 1 cut(s) | 414 |
| XspI | CTAG | 1 cut(s) | 581 |