Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0010689

Physical Location & Seq

Genomic Coordinates Forward (+)

26915404 .. 26918386

Gene Structure 2983 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G292000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1098 bp

ATGAATTGCAGCGTGAACAACGGAGGAAGAGGAGAGAGGGCACATGAGCAAACGGTTTTGCGAAGGTCGGTGGAGGTTGAACCGATATTGGTCCCGCAGCAGCTGACGATCGATGAGAACTTGCTGGTTGACCCGAATTTGTTGTTTATCGGGTCGAAAATCGGGGAAGGAGCACATGGGAAAGTTTATGAAGGAAGGTACCGTGATCGAATTGTTGCTATCAAAGTCCTCCATCGTGGGAGTACTTCTGAAGAAAGAGCTGCACTTGAGAGTCGTTTTGCTCGTGAAGTTAATATGATGTCTAGGGTAAAACATGAAAATCTTGTCAAGTTTATTGGAGCTTGCAAGGATCCTCTAATGGTGATAGTTACTGAGCTATTACCCGGGATGTCACTCCGGAAGTACCTGATGAGTATTCGTCCAAATCCATTGGAACTCCATGTGGCAATTAAATTTGCTCTTGATATCGCTCATGCAATGGAATGTTTACATGCCAATGGGATTATCCATAGAGATCTGAAACCTGACAATTTATTGCTTACGGAAAATCAGAAACATGTAAAGCTTGCGGATTTTGGTCTTGCAAGAGAAGAAAGCGTTACAGAGATGATGACAGCAGAAACTGGGACTTACCGTTGGATGGCTCCAGAGCTGTATAGCACTGTGACCTTACGTCAGGGAGAGAAGAAGCATTACAATAACAAGGTTGATGTATATAGCTTTGGGATCGTCTTATGGGAATTATTGACCAACCGCATGCCCTTTGAAGGCATGTCCAATTTGCAGGCTGCTTATGCTGCTGCTTTCAAGCAAGAGAGGCCTCGACTTCCGGAGGATATATCCCCTGATCTTGCCTTTGTCATCCAGTCATGCTGGGTTGAAGACCCTAATTTAAGGCCTACCTTCAGCCAGATCATCCGCATGCTCAACTCATTCCTCTTCAAACTCTCACCACCCTCACCGCCTATACCAGATACTGACACCAACGAAGCAGCAGCAAGTAATGGTACCATGAGTGAATTATCTGTTCGGACAAGAGGGAAGTTTGCTTTCCTTAGGCAACTGTTCAATGCTAAGAGGACCAAGAACTCACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

366

Amino Acids

41.35

Weight (kDa)

8.57

Isoelectric Point (pI)

43.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010689)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01850 AT5G01850
fragaria_vesca	FvH4_6g10040
malus_domestica	MD04G1173100.v1.1 MD12G1186500.v1.1
prunus_persica	Prupe.6G292000_v2.0.a1
pyrus_communis	pycom04g15310
rosa_chinensis	RchiOBHm_Chr3g0460721
rosa_laevigata	RLG00000024985
rosa_multiflora	Rmu_sc0003662.1_g000003 Rmu_sc0011069.1_g000006 Rmu_sc0036518.1_g000001
rosa_roxburghii	Rroxscaffold_6G00419270
rosa_rugosa	Rorug03G0045400 Rorug03G0045500
rosa_samantha	Rh3AG103000 Rh3BG106700 Rh3CG108500 Rh3DG108200
rosa_wichuraiana	Rw3G008770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	198, 1007
AccB1I	GGYRCC	2 cut(s)	198, 1007
AccIII	TCCGGA	2 cut(s)	396, 829
AciI	CCGC	5 cut(s)	95, 569, 754, 919, 962
AclWI	GGATC	3 cut(s)	344, 357, 734
AcsI	RAATTY	2 cut(s)	136, 452
AcuI	CTGAAG	2 cut(s)	270, 889
AfaI	GTAC	4 cut(s)	200, 244, 404, 1009
AfiI	CCNNNNNNNGG	2 cut(s)	640, 767
AflIII	ACRYGT	1 cut(s)	556
AgsI	TTSAA	6 cut(s)	80, 767, 808, 881, 943, 1069
AhdI	GACNNNNNGTC	1 cut(s)	672
AluBI	AGCT	7 cut(s)	103, 260, 341, 376, 565, 652, 720
AluI	AGCT	7 cut(s)	103, 260, 341, 376, 565, 652, 720
Alw21I	GWGCWC	1 cut(s)	175
AlwI	GGATC	3 cut(s)	344, 357, 734
AlwNI	CAGNNNCTG	3 cut(s)	103, 623, 977
Ama87I	CYCGRG	1 cut(s)	383
Aor13HI	TCCGGA	2 cut(s)	396, 829
AoxI	GGCC	2 cut(s)	818, 896
ApeKI	GCWGC	9 cut(s)	9, 97, 100, 260, 788, 797, 800, 992, 995
ApoI	RAATTY	2 cut(s)	136, 452
Asp718I	GGTACC	2 cut(s)	198, 1007
AspS9I	GGNCC	2 cut(s)	91, 1080
AsuC2I	CCSGG	2 cut(s)	384, 385
AsuHPI	GGTGA	3 cut(s)	373, 942, 951
AvaI	CYCGRG	1 cut(s)	383
AvaII	GGWCC	2 cut(s)	91, 1080
AxyI	CCTNAGG	1 cut(s)	1055
BaeGI	GKGCMC	1 cut(s)	43
BamHI	GGATCC	1 cut(s)	349
BanI	GGYRCC	2 cut(s)	198, 1007
BarI	GAAGNNNNNNTAC	2 cut(s)	677, 709
BauI	CACGAG	1 cut(s)	282
BbsI	GAAGAC	1 cut(s)	888
Bbv12I	GWGCWC	1 cut(s)	175
BbvI	GCAGC	9 cut(s)	21, 109, 112, 247, 775, 784, 787, 1004, 1007
BccI	CCATC	2 cut(s)	240, 634
BcnI	CCSGG	2 cut(s)	384, 385
BfaI	CTAG	1 cut(s)	303
BglII	AGATCT	1 cut(s)	514
BisI	GCNGC	9 cut(s)	10, 98, 101, 261, 789, 798, 801, 993, 996
BlsI	GCNGC	9 cut(s)	11, 99, 102, 262, 790, 799, 802, 994, 997
BmcAI	AGTACT	1 cut(s)	244
Bme1390I	CCNGG	2 cut(s)	384, 385
Bme18I	GGWCC	2 cut(s)	91, 1080
BmeRI	GACNNNNNGTC	1 cut(s)	672
BmeT110I	CYCGRG	1 cut(s)	383
BmgT120I	GGNCC	2 cut(s)	91, 1080
BmiI	GGNNCC	5 cut(s)	93, 200, 351, 645, 1009
BmrFI	CCNGG	2 cut(s)	384, 385
BmrI	ACTGGG	1 cut(s)	633
BmuI	ACTGGG	1 cut(s)	633
BpiI	GAAGAC	1 cut(s)	888
BpmI	CTGGAG	1 cut(s)	630
BpuEI	CTTGAG	1 cut(s)	287
BpuMI	CCSGG	2 cut(s)	384, 385
Bsa29I	ATCGAT	1 cut(s)	111
BsaJI	CCNNGG	1 cut(s)	383
BsaWI	WCCGGW	2 cut(s)	396, 829
Bsc4I	CCNNNNNNNGG	2 cut(s)	640, 767
Bse1I	ACTGG	2 cut(s)	628, 865
Bse21I	CCTNAGG	1 cut(s)	1055
Bse3DI	GCAATG	1 cut(s)	483
BseAI	TCCGGA	2 cut(s)	396, 829
BseCI	ATCGAT	1 cut(s)	111
BseDI	CCNNGG	1 cut(s)	383
BseGI	GGATG	4 cut(s)	393, 645, 861, 915
BseLI	CCNNNNNNNGG	2 cut(s)	640, 767
BseMI	GCAATG	1 cut(s)	483
BseMII	CTCAG	1 cut(s)	363
BseNI	ACTGG	2 cut(s)	628, 865
BseRI	GAGGAG	1 cut(s)	45
BseSI	GKGCMC	1 cut(s)	43
BseXI	GCAGC	9 cut(s)	21, 109, 112, 247, 775, 784, 787, 1004, 1007
BseYI	CCCAGC	1 cut(s)	873
BsgI	GTGCAG	1 cut(s)	246
Bsh1285I	CGRYCG	1 cut(s)	111
BshFI	GGCC	2 cut(s)	820, 898
BshNI	GGYRCC	2 cut(s)	198, 1007
BshVI	ATCGAT	1 cut(s)	111
BsiEI	CGRYCG	1 cut(s)	111
BsiHKAI	GWGCWC	1 cut(s)	175
BsiHKCI	CYCGRG	1 cut(s)	383
BsiSI	CCGG	3 cut(s)	384, 397, 830
BslFI	GGGAC	2 cut(s)	77, 640
BslI	CCNNNNNNNGG	2 cut(s)	640, 767
BsmFI	GGGAC	2 cut(s)	77, 640
BsnI	GGCC	2 cut(s)	820, 898
BsoBI	CYCGRG	1 cut(s)	383
Bsp1286I	GDGCHC	2 cut(s)	43, 175
Bsp13I	TCCGGA	2 cut(s)	396, 829
Bsp143I	GATC	7 cut(s)	108, 205, 349, 514, 726, 847, 912
BspACI	CCGC	5 cut(s)	95, 569, 754, 919, 962
BspANI	GGCC	2 cut(s)	820, 898
BspCNI	CTCAG	1 cut(s)	364
BspDI	ATCGAT	1 cut(s)	111
BspEI	TCCGGA	2 cut(s)	396, 829
BspLI	GGNNCC	5 cut(s)	93, 200, 351, 645, 1009
BspPI	GGATC	3 cut(s)	344, 357, 734
BspT107I	GGYRCC	2 cut(s)	198, 1007
BsrDI	GCAATG	1 cut(s)	483
BsrI	ACTGG	2 cut(s)	628, 865
BssECI	CCNNGG	1 cut(s)	383
BssMI	GATC	7 cut(s)	108, 205, 349, 514, 726, 847, 912
BssSI	CACGAG	1 cut(s)	282
Bst2BI	CACGAG	1 cut(s)	282
Bst4CI	ACNGT	5 cut(s)	55, 203, 635, 664, 1065
Bst6I	CTCTTC	2 cut(s)	22, 944
BstC8I	GCNNGC	5 cut(s)	343, 567, 758, 786, 923
BstDEI	CTNAG	3 cut(s)	372, 1055, 1074
BstF5I	GGATG	4 cut(s)	393, 645, 861, 915
BstKTI	GATC	7 cut(s)	111, 208, 352, 517, 729, 850, 915
BstMBI	GATC	7 cut(s)	108, 205, 349, 514, 726, 847, 912
BstMCI	CGRYCG	1 cut(s)	111
BstMWI	GCNNNNNNNGC	3 cut(s)	794, 797, 817
BstNSI	RCATGY	5 cut(s)	494, 560, 760, 775, 925
BstSCI	CCNGG	2 cut(s)	382, 383
BstSLI	GKGCMC	1 cut(s)	43
BstV1I	GCAGC	9 cut(s)	21, 109, 112, 247, 775, 784, 787, 1004, 1007
BstV2I	GAAGAC	1 cut(s)	888
BstX2I	RGATCY	2 cut(s)	349, 514
BstYI	RGATCY	2 cut(s)	349, 514
Bsu15I	ATCGAT	1 cut(s)	111
Bsu36I	CCTNAGG	1 cut(s)	1055
BsuRI	GGCC	2 cut(s)	820, 898
BsuTUI	ATCGAT	1 cut(s)	111
BtsCI	GGATG	4 cut(s)	393, 645, 861, 915
BtsIMutI	CAGTG	1 cut(s)	660
Cac8I	GCNNGC	5 cut(s)	343, 567, 758, 786, 923
CaiI	CAGNNNCTG	3 cut(s)	103, 623, 977
Cfr13I	GGNCC	2 cut(s)	91, 1080
Cfr9I	CCCGGG	1 cut(s)	383
ClaI	ATCGAT	1 cut(s)	111
Csp6I	GTAC	4 cut(s)	199, 243, 403, 1008
CviQI	GTAC	4 cut(s)	199, 243, 403, 1008
DdeI	CTNAG	3 cut(s)	372, 1055, 1074
DpnI	GATC	7 cut(s)	110, 207, 351, 516, 728, 849, 914
DpnII	GATC	7 cut(s)	108, 205, 349, 514, 726, 847, 912
DriI	GACNNNNNGTC	1 cut(s)	672
Eam1104I	CTCTTC	2 cut(s)	22, 944
Eam1105I	GACNNNNNGTC	1 cut(s)	672
EarI	CTCTTC	2 cut(s)	22, 944
Eco147I	AGGCCT	2 cut(s)	820, 898
Eco32I	GATATC	1 cut(s)	466
Eco47I	GGWCC	2 cut(s)	91, 1080
Eco57I	CTGAAG	2 cut(s)	270, 889
Eco81I	CCTNAGG	1 cut(s)	1055
Eco88I	CYCGRG	1 cut(s)	383
EcoRV	GATATC	1 cut(s)	466
FaqI	GGGAC	2 cut(s)	77, 640
FauI	CCCGC	1 cut(s)	102
Fnu4HI	GCNGC	9 cut(s)	10, 98, 101, 261, 789, 798, 801, 993, 996
FokI	GGATG	4 cut(s)	400, 652, 848, 902
Fsp4HI	GCNGC	9 cut(s)	10, 98, 101, 261, 789, 798, 801, 993, 996
FspBI	CTAG	1 cut(s)	303
GluI	GCNGC	9 cut(s)	10, 98, 101, 261, 789, 798, 801, 993, 996
GsaI	CCCAGC	1 cut(s)	877
GsuI	CTGGAG	1 cut(s)	630
HaeIII	GGCC	2 cut(s)	820, 898
HapII	CCGG	3 cut(s)	384, 397, 830
HincII	GTYRAC	1 cut(s)	130
HindII	GTYRAC	1 cut(s)	130
HindIII	AAGCTT	1 cut(s)	563
HinfI	GANTC	1 cut(s)	271
HpaII	CCGG	3 cut(s)	384, 397, 830
HphI	GGTGA	3 cut(s)	373, 942, 951
Hpy166II	GTNNAC	3 cut(s)	16, 130, 488
Hpy188I	TCNGA	4 cut(s)	250, 519, 552, 1032
Hpy188III	TCNNGA	5 cut(s)	284, 397, 461, 647, 830
Hpy8I	GTNNAC	3 cut(s)	16, 130, 488
HpyAV	CCTTC	6 cut(s)	57, 161, 185, 189, 761, 913
HpyCH4III	ACNGT	5 cut(s)	55, 203, 635, 664, 1065
HpyCH4IV	ACGT	1 cut(s)	673
HpyCH4V	TGCA	6 cut(s)	9, 263, 345, 476, 584, 784
HpyF10VI	GCNNNNNNNGC	3 cut(s)	794, 797, 817
HpyF3I	CTNAG	3 cut(s)	372, 1055, 1074
HpySE526I	ACGT	1 cut(s)	673
Kpn2I	TCCGGA	2 cut(s)	396, 829
KpnI	GGTACC	2 cut(s)	202, 1011
Kzo9I	GATC	7 cut(s)	108, 205, 349, 514, 726, 847, 912
LmnI	GCTCC	3 cut(s)	170, 338, 649
Lsp1109I	GCAGC	9 cut(s)	21, 109, 112, 247, 775, 784, 787, 1004, 1007
MaeI	CTAG	1 cut(s)	303
MaeII	ACGT	1 cut(s)	673
MaeIII	GTNAC	4 cut(s)	367, 390, 598, 664
MalI	GATC	7 cut(s)	110, 207, 351, 516, 728, 849, 914
MboI	GATC	7 cut(s)	108, 205, 349, 514, 726, 847, 912
MboII	GAAGA	6 cut(s)	39, 263, 602, 697, 893, 931
MflI	RGATCY	2 cut(s)	349, 514
MhlI	GDGCHC	2 cut(s)	43, 175
MlyI	GAGTC	1 cut(s)	280
MmeI	TCCRAC	1 cut(s)	617
MroI	TCCGGA	2 cut(s)	396, 829
MseI	TTAA	3 cut(s)	291, 450, 893
MslI	CAYNNNNRTG	2 cut(s)	495, 920
MspA1I	CMGCKG	1 cut(s)	103
MspI	CCGG	3 cut(s)	384, 397, 830
MspR9I	CCNGG	2 cut(s)	384, 385
MwoI	GCNNNNNNNGC	3 cut(s)	794, 797, 817
NciI	CCSGG	2 cut(s)	384, 385
NdeII	GATC	7 cut(s)	108, 205, 349, 514, 726, 847, 912
NlaIV	GGNNCC	5 cut(s)	93, 200, 351, 645, 1009
NmuCI	GTSAC	2 cut(s)	390, 664
NspI	RCATGY	5 cut(s)	494, 560, 760, 775, 925
PaeI	GCATGC	2 cut(s)	760, 925
PceI	AGGCCT	2 cut(s)	820, 898
PciI	ACATGT	1 cut(s)	556
PcsI	WCGNNNNNNNCGW	1 cut(s)	280
PkrI	GCNGC	9 cut(s)	11, 99, 102, 262, 790, 799, 802, 994, 997
Ple19I	CGATCG	1 cut(s)	111
PleI	GAGTC	1 cut(s)	279
PpsI	GAGTC	1 cut(s)	279
PscI	ACATGT	1 cut(s)	556
PspFI	CCCAGC	1 cut(s)	873
PspN4I	GGNNCC	5 cut(s)	93, 200, 351, 645, 1009
PspPI	GGNCC	2 cut(s)	91, 1080
PstNI	CAGNNNCTG	3 cut(s)	103, 623, 977
PsuI	RGATCY	2 cut(s)	349, 514
PvuI	CGATCG	1 cut(s)	111
PvuII	CAGCTG	1 cut(s)	103
RsaI	GTAC	4 cut(s)	200, 244, 404, 1009
RsaNI	GTAC	4 cut(s)	199, 243, 403, 1008
RseI	CAYNNNNRTG	2 cut(s)	495, 920
SaqAI	TTAA	3 cut(s)	291, 450, 893
SatI	GCNGC	9 cut(s)	10, 98, 101, 261, 789, 798, 801, 993, 996
Sau3AI	GATC	7 cut(s)	108, 205, 349, 514, 726, 847, 912
Sau96I	GGNCC	2 cut(s)	91, 1080
ScaI	AGTACT	1 cut(s)	244
SchI	GAGTC	1 cut(s)	280
ScrFI	CCNGG	2 cut(s)	384, 385
SduI	GDGCHC	2 cut(s)	43, 175
SinI	GGWCC	2 cut(s)	91, 1080
SmaI	CCCGGG	1 cut(s)	385
SmiMI	CAYNNNNRTG	2 cut(s)	495, 920
SmlI	CTYRAG	1 cut(s)	266
SmoI	CTYRAG	1 cut(s)	266
SphI	GCATGC	2 cut(s)	760, 925
SseBI	AGGCCT	2 cut(s)	820, 898
SsiI	CCGC	5 cut(s)	95, 569, 754, 919, 962
SspMI	CTAG	1 cut(s)	303
StuI	AGGCCT	2 cut(s)	820, 898
StyD4I	CCNGG	2 cut(s)	382, 383
TaaI	ACNGT	5 cut(s)	55, 203, 635, 664, 1065
TaiI	ACGT	1 cut(s)	676
TaqI	TCGA	4 cut(s)	111, 155, 208, 823
TatI	WGTACW	1 cut(s)	242
Tru1I	TTAA	3 cut(s)	291, 450, 893
Tru9I	TTAA	3 cut(s)	291, 450, 893
TscAI	CASTG	1 cut(s)	667
TseFI	GTSAC	2 cut(s)	390, 664
TseI	GCWGC	9 cut(s)	9, 97, 100, 260, 788, 797, 800, 992, 995
Tsp45I	GTSAC	2 cut(s)	390, 664
TspDTI	ATGAA	3 cut(s)	17, 204, 330
TspGWI	ACGGA	2 cut(s)	36, 557
TspMI	CCCGGG	1 cut(s)	383
TspRI	CASTG	1 cut(s)	667
VpaK11BI	GGWCC	2 cut(s)	91, 1080
XapI	RAATTY	2 cut(s)	136, 452
XceI	RCATGY	5 cut(s)	494, 560, 760, 775, 925
XmaI	CCCGGG	1 cut(s)	383
XspI	CTAG	1 cut(s)	303
ZrmI	AGTACT	1 cut(s)	244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.