Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0013806

Physical Location & Seq

Genomic Coordinates Reverse (-)

27259342 .. 27261647

Gene Structure 2306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G299800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 906 bp

ATGGAAGGATTAGATGCGCTGATAGAGAGACTGTTGGAAGCAAGGATCAACAGAGGTAAAAGGATTCAGCTAATCGAGTCCGAAATTCGACAACTTTGCATTACTGCAAAAGAAGTCTTTCTCAGGCAGCCTAATCTTCTTGAGTTGGAAGCTCCCATCAATGTTTGCGGTGATATACATGGGCAATATCCAGACCTCTTGCGACTGTTCGAATATGGCGGATTCCCACCAGATGCCAACTACGTGTTCCTTGGAGACTATGTAGATAGAGGAAAACAGAGCATAGAGACCATATGCCTTCTCCTTGCGTACAAAGTCAAGTTCCCTGATAACTTCTTCCTCCTCCGAGGGAACCATGAGTGTGCATCCATCAACAGAATCTATGGATTCTATGATGAGTGTAAACGCCGCTTCAGCGTCCGGCTATGGAAGATTTTCACAGACTCCTTTAACTGTTTGCCTGTGGCTGCAGTCATCGATGACAAGATCTTCTGCATGCATGGCGGCCTTTCTCCTGAGCTGAACAACTTGGAGCAACTCAGAGCCATTGAAAGGCCGATTGATGTGCCCGACCAAGGGCTCTTGTGTGACCTACTTTGGTCGGATCCAGATAGGGACATTAAAGGGTGGGGTGAGAATGATAGGGGTGTTTCTTATACCTTTGGGGCAGATAAGGTGGCAGAGTTCTTGATGAAACATGATCTGGATCTCATATGTCGGGCTCATCAGGTTGTTGAAGATGGTTACGAATTCTTCGCAGACAGGCAGTTGGTTACCATATTCTCTGCACCGAACTATTGTGGAGAGTTCAACAATGCAGGTGCCTTGATGAATGTGGATGCAAGTTTGCTCTGCTCATTTCAGATAGTCAAACCCTGGAGAGGGAAAGCTCCCCAGCTAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03015 ko04022 ko04024 ko04113 ko04114 ko04218 ko04261 ko04270 ko04390 ko04510 ko04611 ko04720 ko04728 ko04750 ko04810 ko04910 ko04921 ko04931 ko05031 ko05034 ko05168 ko05205 map03015 map04022 map04024 map04113 map04114 map04218 map04261 map04270 map04390 map04510 map04611 map04720 map04728 map04750 map04810 map04910 map04921 map04931 map05031 map05034 map05168 map05205

Pfam Domains

Protein Families

Metallophos STPPase_N

Protein Analysis

302

Amino Acids

34.44

Weight (kDa)

4.99

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43380 AT5G43380 AT5G43380
fragaria_vesca	FvH4_6g09230
malus_domestica	MD04G1179900.v1.1 MD12G1195100.v1.1
prunus_persica	Prupe.6G299800_v2.0.a1 Prupe.6G299800_v2.0.a1
pyrus_communis	pycom04g15910 pycom12g18130
rosa_chinensis	RchiOBHm_Chr3g0459571
rosa_laevigata	RLG00000025079
rosa_multiflora	Rmu_sc0000240.1_g000007
rosa_roxburghii	Rroxscaffold_6G00420180
rosa_rugosa	Rorug03G0036400
rosa_samantha	Rh3DG099000
rosa_wichuraiana	Rw0G013870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	809
Acc36I	ACCTGC	1 cut(s)	809
AccB1I	GGYRCC	1 cut(s)	821
AciI	CCGC	4 cut(s)	168, 219, 409, 504
AclWI	GGATC	4 cut(s)	53, 599, 612, 714
AcsI	RAATTY	2 cut(s)	84, 749
AcuI	CTGAAG	1 cut(s)	397
AfaI	GTAC	1 cut(s)	311
AfiI	CCNNNNNNNGG	5 cut(s)	552, 575, 576, 881, 882
AflIII	ACRYGT	1 cut(s)	243
AgsI	TTSAA	3 cut(s)	551, 737, 811
AjnI	CCWGG	1 cut(s)	875
AjuI	GAANNNNNNNTTGG	2 cut(s)	230, 262
AluBI	AGCT	5 cut(s)	70, 152, 520, 890, 898
AluI	AGCT	5 cut(s)	70, 152, 520, 890, 898
Alw26I	GTCTC	3 cut(s)	22, 249, 281
AlwI	GGATC	4 cut(s)	53, 599, 612, 714
AoxI	GGCC	2 cut(s)	505, 554
ApeKI	GCWGC	2 cut(s)	127, 467
ApoI	RAATTY	2 cut(s)	84, 749
Asp700I	GAANNNNTTC	2 cut(s)	117, 434
AspLEI	GCGC	1 cut(s)	19
AsuHPI	GGTGA	2 cut(s)	182, 644
AsuII	TTCGAA	1 cut(s)	210
BaeGI	GKGCMC	1 cut(s)	570
BamHI	GGATCC	1 cut(s)	604
BanI	GGYRCC	1 cut(s)	821
BanII	GRGCYC	2 cut(s)	582, 724
BbvI	GCAGC	2 cut(s)	139, 454
BccI	CCATC	3 cut(s)	164, 377, 734
BcgI	CGANNNNNNTGC	4 cut(s)	78, 112, 547, 581
BciT130I	CCWGG	1 cut(s)	877
BcoDI	GTCTC	3 cut(s)	22, 249, 281
BfaI	CTAG	1 cut(s)	899
BfmI	CTRYAG	1 cut(s)	468
BfuAI	ACCTGC	1 cut(s)	809
BglII	AGATCT	1 cut(s)	486
BisI	GCNGC	4 cut(s)	128, 409, 468, 505
BlsI	GCNGC	4 cut(s)	129, 410, 469, 506
Bme1390I	CCNGG	1 cut(s)	877
BmiI	GGNNCC	3 cut(s)	353, 606, 823
BmrFI	CCNGG	1 cut(s)	877
BmsI	GCATC	4 cut(s)	4, 223, 374, 829
BpmI	CTGGAG	1 cut(s)	898
Bpu10I	CCTNAGC	1 cut(s)	516
Bpu14I	TTCGAA	1 cut(s)	210
BpuEI	CTTGAG	1 cut(s)	161
Bsa29I	ATCGAT	1 cut(s)	477
BsaAI	YACGTR	1 cut(s)	244
BsaBI	GATNNNNATC	1 cut(s)	705
BsaI	GGTCTC	1 cut(s)	281
BsaJI	CCNNGG	4 cut(s)	250, 346, 574, 875
BsaXI	ACNNNNNCTCC	2 cut(s)	246, 276
Bsc4I	CCNNNNNNNGG	5 cut(s)	552, 575, 576, 881, 882
Bse8I	GATNNNNATC	1 cut(s)	705
BseBI	CCWGG	1 cut(s)	877
BseCI	ATCGAT	1 cut(s)	477
BseDI	CCNNGG	4 cut(s)	250, 346, 574, 875
BseGI	GGATG	2 cut(s)	365, 844
BseJI	GATNNNNATC	1 cut(s)	705
BseLI	CCNNNNNNNGG	5 cut(s)	552, 575, 576, 881, 882
BseMII	CTCAG	3 cut(s)	136, 507, 553
BseRI	GAGGAG	1 cut(s)	332
BseSI	GKGCMC	1 cut(s)	570
BseXI	GCAGC	2 cut(s)	139, 454
BseYI	CCCAGC	1 cut(s)	894
BsgI	GTGCAG	1 cut(s)	771
BshFI	GGCC	2 cut(s)	507, 556
BshNI	GGYRCC	1 cut(s)	821
BshVI	ATCGAT	1 cut(s)	477
BsiSI	CCGG	1 cut(s)	421
BslFI	GGGAC	1 cut(s)	629
BslI	CCNNNNNNNGG	5 cut(s)	552, 575, 576, 881, 882
BsmAI	GTCTC	3 cut(s)	22, 249, 281
BsmFI	GGGAC	1 cut(s)	629
BsnI	GGCC	2 cut(s)	507, 556
Bso31I	GGTCTC	1 cut(s)	281
Bsp119I	TTCGAA	1 cut(s)	210
Bsp1286I	GDGCHC	3 cut(s)	570, 582, 724
Bsp143I	GATC	5 cut(s)	45, 486, 604, 700, 706
BspACI	CCGC	4 cut(s)	168, 219, 409, 504
BspANI	GGCC	2 cut(s)	507, 556
BspCNI	CTCAG	3 cut(s)	135, 508, 552
BspDI	ATCGAT	1 cut(s)	477
BspLI	GGNNCC	3 cut(s)	353, 606, 823
BspMAI	CTGCAG	1 cut(s)	472
BspMI	ACCTGC	1 cut(s)	809
BspPI	GGATC	4 cut(s)	53, 599, 612, 714
BspT104I	TTCGAA	1 cut(s)	210
BspT107I	GGYRCC	1 cut(s)	821
BspTNI	GGTCTC	1 cut(s)	281
BssECI	CCNNGG	4 cut(s)	250, 346, 574, 875
BssMI	GATC	5 cut(s)	45, 486, 604, 700, 706
BssT1I	CCWWGG	2 cut(s)	250, 574
Bst2UI	CCWGG	1 cut(s)	877
Bst4CI	ACNGT	3 cut(s)	33, 207, 455
BstBAI	YACGTR	1 cut(s)	244
BstBI	TTCGAA	1 cut(s)	210
BstC8I	GCNNGC	1 cut(s)	497
BstDEI	CTNAG	3 cut(s)	122, 516, 539
BstEII	GGTNACC	1 cut(s)	772
BstF5I	GGATG	2 cut(s)	365, 844
BstHHI	GCGC	1 cut(s)	19
BstKTI	GATC	5 cut(s)	48, 489, 607, 703, 709
BstMAI	GTCTC	3 cut(s)	22, 249, 281
BstMBI	GATC	5 cut(s)	45, 486, 604, 700, 706
BstMWI	GCNNNNNNNGC	2 cut(s)	414, 501
BstNI	CCWGG	1 cut(s)	877
BstNSI	RCATGY	1 cut(s)	499
BstPI	GGTNACC	1 cut(s)	772
BstSCI	CCNGG	1 cut(s)	875
BstSFI	CTRYAG	1 cut(s)	468
BstSLI	GKGCMC	1 cut(s)	570
BstV1I	GCAGC	2 cut(s)	139, 454
BstX2I	RGATCY	3 cut(s)	486, 604, 706
BstYI	RGATCY	3 cut(s)	486, 604, 706
Bsu15I	ATCGAT	1 cut(s)	477
BsuRI	GGCC	2 cut(s)	507, 556
BsuTUI	ATCGAT	1 cut(s)	477
BtsCI	GGATG	2 cut(s)	365, 844
BveI	ACCTGC	1 cut(s)	809
Cac8I	GCNNGC	1 cut(s)	497
CfoI	GCGC	1 cut(s)	19
ClaI	ATCGAT	1 cut(s)	477
CseI	GACGC	1 cut(s)	406
Csp6I	GTAC	1 cut(s)	310
CviAII	CATG	5 cut(s)	179, 356, 496, 500, 698
CviQI	GTAC	1 cut(s)	310
DdeI	CTNAG	3 cut(s)	122, 516, 539
DpnI	GATC	5 cut(s)	47, 488, 606, 702, 708
DpnII	GATC	5 cut(s)	45, 486, 604, 700, 706
EciI	GGCGGA	1 cut(s)	234
Eco130I	CCWWGG	2 cut(s)	250, 574
Eco24I	GRGCYC	2 cut(s)	582, 724
Eco31I	GGTCTC	1 cut(s)	281
Eco57I	CTGAAG	1 cut(s)	397
Eco91I	GGTNACC	1 cut(s)	772
EcoO65I	GGTNACC	1 cut(s)	772
EcoRI	GAATTC	1 cut(s)	749
EcoRII	CCWGG	1 cut(s)	875
EcoT14I	CCWWGG	2 cut(s)	250, 574
EcoT22I	ATGCAT	1 cut(s)	501
EcoT38I	GRGCYC	2 cut(s)	582, 724
ErhI	CCWWGG	2 cut(s)	250, 574
FaeI	CATG	5 cut(s)	182, 359, 499, 503, 701
FaqI	GGGAC	1 cut(s)	629
FatI	CATG	5 cut(s)	178, 355, 495, 499, 697
FauNDI	CATATG	2 cut(s)	293, 713
Fnu4HI	GCNGC	4 cut(s)	128, 409, 468, 505
FokI	GGATG	2 cut(s)	352, 851
FriOI	GRGCYC	2 cut(s)	582, 724
Fsp4HI	GCNGC	4 cut(s)	128, 409, 468, 505
FspBI	CTAG	1 cut(s)	899
GlaI	GCGC	1 cut(s)	18
GluI	GCNGC	4 cut(s)	128, 409, 468, 505
GsaI	CCCAGC	1 cut(s)	898
GsuI	CTGGAG	1 cut(s)	898
HaeIII	GGCC	2 cut(s)	507, 556
HapII	CCGG	1 cut(s)	421
HgaI	GACGC	1 cut(s)	406
HhaI	GCGC	1 cut(s)	19
Hin1II	CATG	5 cut(s)	182, 359, 499, 503, 701
Hin6I	GCGC	1 cut(s)	17
HinP1I	GCGC	1 cut(s)	17
HinfI	GANTC	6 cut(s)	64, 77, 222, 378, 387, 443
HpaII	CCGG	1 cut(s)	421
HphI	GGTGA	2 cut(s)	182, 644
Hpy166II	GTNNAC	1 cut(s)	404
Hpy188I	TCNGA	5 cut(s)	82, 347, 542, 604, 864
Hpy188III	TCNNGA	6 cut(s)	140, 191, 515, 608, 688, 704
Hpy8I	GTNNAC	1 cut(s)	404
HpyAV	CCTTC	1 cut(s)	308
HpyCH4III	ACNGT	3 cut(s)	33, 207, 455
HpyCH4IV	ACGT	1 cut(s)	243
HpyCH4V	TGCA	9 cut(s)	99, 107, 365, 470, 495, 499, 788, 818, 842
HpyF10VI	GCNNNNNNNGC	2 cut(s)	414, 501
HpyF3I	CTNAG	3 cut(s)	122, 516, 539
HpySE526I	ACGT	1 cut(s)	243
Hsp92II	CATG	5 cut(s)	182, 359, 499, 503, 701
HspAI	GCGC	1 cut(s)	17
Kzo9I	GATC	5 cut(s)	45, 486, 604, 700, 706
LmnI	GCTCC	3 cut(s)	157, 532, 895
Lsp1109I	GCAGC	2 cut(s)	139, 454
LweI	GCATC	4 cut(s)	4, 223, 374, 829
MaeI	CTAG	1 cut(s)	899
MaeII	ACGT	1 cut(s)	243
MaeIII	GTNAC	3 cut(s)	587, 743, 772
MalI	GATC	5 cut(s)	47, 488, 606, 702, 708
MboI	GATC	5 cut(s)	45, 486, 604, 700, 706
MboII	GAAGA	6 cut(s)	128, 328, 442, 481, 745, 749
MflI	RGATCY	3 cut(s)	486, 604, 706
MhlI	GDGCHC	3 cut(s)	570, 582, 724
MluCI	AATT	2 cut(s)	84, 749
MlyI	GAGTC	2 cut(s)	86, 437
MmeI	TCCRAC	3 cut(s)	15, 126, 582
MnlI	CCTC	7 cut(s)	47, 206, 263, 341, 350, 353, 875
Mph1103I	ATGCAT	1 cut(s)	501
MroXI	GAANNNNTTC	2 cut(s)	117, 434
MseI	TTAA	2 cut(s)	450, 621
MslI	CAYNNNNRTG	1 cut(s)	360
MspI	CCGG	1 cut(s)	421
MspR9I	CCNGG	1 cut(s)	877
MvaI	CCWGG	1 cut(s)	877
MwoI	GCNNNNNNNGC	2 cut(s)	414, 501
NdeI	CATATG	2 cut(s)	293, 713
NdeII	GATC	5 cut(s)	45, 486, 604, 700, 706
NlaIII	CATG	5 cut(s)	182, 359, 499, 503, 701
NlaIV	GGNNCC	3 cut(s)	353, 606, 823
NmuCI	GTSAC	1 cut(s)	587
NsiI	ATGCAT	1 cut(s)	501
NspI	RCATGY	1 cut(s)	499
NspV	TTCGAA	1 cut(s)	210
PaeI	GCATGC	1 cut(s)	499
PaqCI	CACCTGC	1 cut(s)	809
PdmI	GAANNNNTTC	2 cut(s)	117, 434
PfeI	GAWTC	4 cut(s)	64, 222, 378, 387
PkrI	GCNGC	4 cut(s)	129, 410, 469, 506
PleI	GAGTC	2 cut(s)	85, 437
PpsI	GAGTC	2 cut(s)	85, 437
Ppu21I	YACGTR	1 cut(s)	244
Psp6I	CCWGG	1 cut(s)	875
PspEI	GGTNACC	1 cut(s)	772
PspFI	CCCAGC	1 cut(s)	894
PspGI	CCWGG	1 cut(s)	875
PspN4I	GGNNCC	3 cut(s)	353, 606, 823
PstI	CTGCAG	1 cut(s)	472
PsuI	RGATCY	3 cut(s)	486, 604, 706
RsaI	GTAC	1 cut(s)	311
RsaNI	GTAC	1 cut(s)	310
RseI	CAYNNNNRTG	1 cut(s)	360
SaqAI	TTAA	2 cut(s)	450, 621
SatI	GCNGC	4 cut(s)	128, 409, 468, 505
Sau3AI	GATC	5 cut(s)	45, 486, 604, 700, 706
SchI	GAGTC	2 cut(s)	86, 437
ScrFI	CCNGG	1 cut(s)	877
SduI	GDGCHC	3 cut(s)	570, 582, 724
SfaNI	GCATC	4 cut(s)	4, 223, 374, 829
SfcI	CTRYAG	1 cut(s)	468
SfuI	TTCGAA	1 cut(s)	210
SmiMI	CAYNNNNRTG	1 cut(s)	360
SmlI	CTYRAG	1 cut(s)	140
SmoI	CTYRAG	1 cut(s)	140
SphI	GCATGC	1 cut(s)	499
Sse9I	AATT	2 cut(s)	84, 749
SsiI	CCGC	4 cut(s)	168, 219, 409, 504
SspMI	CTAG	1 cut(s)	899
StyD4I	CCNGG	1 cut(s)	875
StyI	CCWWGG	2 cut(s)	250, 574
TaaI	ACNGT	3 cut(s)	33, 207, 455
TaiI	ACGT	1 cut(s)	246
TaqI	TCGA	4 cut(s)	75, 88, 210, 477
TasI	AATT	2 cut(s)	84, 749
TauI	GCSGC	2 cut(s)	411, 507
TfiI	GAWTC	4 cut(s)	64, 222, 378, 387
Tru1I	TTAA	2 cut(s)	450, 621
Tru9I	TTAA	2 cut(s)	450, 621
TseFI	GTSAC	1 cut(s)	587
TseI	GCWGC	2 cut(s)	127, 467
Tsp45I	GTSAC	1 cut(s)	587
TspDTI	ATGAA	2 cut(s)	707, 845
XapI	RAATTY	2 cut(s)	84, 749
XceI	RCATGY	1 cut(s)	499
XmnI	GAANNNNTTC	2 cut(s)	117, 434
XspI	CTAG	1 cut(s)	899
Zsp2I	ATGCAT	1 cut(s)	501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.