Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0013806

Physical Location & Seq

Genomic Coordinates Forward (+)

2905328 .. 2908276

Gene Structure 2949 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0036400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2649 bp

ATGGCTTTGGAAGCGATAGCATTGAAGATTGGATCCTCTCTCCTTCTATCCGCTGCCGGAGGAGCAGTGGGTAATGTGGCTTCACTCGCTACTGATCAATTGAGCCTCAAAATCGTCTTCTGTTTCAGCAAAGCAGTAGATGAGCTCAAACAATCCTCAACTAAGATTGGAAATTTGATACATGATGCTGCGCTAGAACCCCAAGATCGGGAACTGCGGGCTATGGCTGACTGGATGAAGAGGCTGATGACCGTAGCTTATGCTGCAGAAGATGTCGTGGATGAAGTTCAATATGAATTTGTTCGGATCCATATAGAGGGGGCAATCCTCGATAAGTGGATACGCAGAATCTTCGTTCGTCTTCAGATGGCAGGCAAGATTGACAACATCCATAGATCCTTGGACAAACTCTGCAACGAAGCAGCCGCTGTGGGACTGACAAGGAGATCAAAGGGAGGTGAAGCATCCAGTCAAAGTCTGCAGGACAGGGAAACAATCTCATTGCTTGAGAAACATGAATTCACTCGCAATGATGCAATCATTGTTGGAAGGGATGAGGTTGTGTCAAATACAACTGCAACCTTGACCAACCCCAACAATCAAGAAAAGATGCTTTTGGTGATGGCCGTTGTAGGATTAGCAGGCTTGGGTAAAACAACGTTGGCTCGCTCGCTTACCAAGCAAGTGAAGCAACTGAAAGAAGGTGAAATGAAAGAGTATTTTGATGTAACTCTCTGGGTGTATGTATCTAAAACTTTTGATGTCAACTCAATTTTACGTGGAATGCTGGAATTATGTGGGGCGACAACAGCAAAGCCTGAATCTCGGGAAGCATTGGTTAAAAGCCTCGGCCAGAAGTTGAAAGGGAAAAGGTATTTTCTTGTACTTGATGATGTTTGGAATGAGGTTCCTCGACTTTGGAAGATTTTGGAGGAGAATCTGCAGAATCTAGAATCTGCCAAAGGCAGCACCGTGATTGTCACTACCCGTAGTGGCAAGGTTGCAGAAATCATGGGAACACTTCCTAATTGCTATCTAGGGACTCTTTCGCATGATCAGTGTTGGTCCATAATACAGGATAGAGCATTTAATATTCCTAATCCTTCGATAGATTCAGACCAAGAGCGAATCGGAAGAGATATTGCCAGAAAGTGTGTTGGTCTTCCATTGGCGGCAAAGATTTTGGGAAGCTTGATGCATTCCAAGAATAGTAGCGACGAATGGAGGTCAATTCTGCAAAGTCCTACATGGCAGTTATTACAAAACCACAAGCATAGCGGAATCATGTCGGTTCTGATGTTGAGTTTTGACAATTTAAAGTCACCTTTGAAACCATGTTTTGCATATTGCTCAATGCTCGATAGAGGTTCCTTAATAAAAAGAGATGAGTTGATCCAACTATGGATGGCTCAAGGTTTTCTCAATCCTTCTCCTCACCAAAGAACGCAAAAGAGGGAGATGGAGGATATAGGCAATGAGTATTTTGATACTTTACTGGAAAAGTCCTTGTTTCAAGATGCTACAAAGGATGAGGATGACGTCATCACCGAATGCAAGATGCATGATCTTGTGCATGAATTTGCAATAGAAGTATCCAGGTGTGAGAGCTGGACACCAAACTTCAATCAGAAGATGGATCATAGTGAGATTCGACATGCTGCACAGATTCCTACTCTAGAAGAAAAAAGTATGTCAGAAACACTGCGTTCACTCTTTTCAAATGTCCAGGTCTCTAATATCATTTTCTCAAAGTTAAGAGCTTTACGTGTCTTAAGTTTCTATGAGGTTGAGACTCAAGAGTTGCCAAATTCACTTGACAAGCTGAAGCACTTGAGGTATCTAGATCTTTCCCATACAGCAATCAGAAAACTCCCAGAGTCTATTGGCAAGCTTTACAACCTCCAGACGTTGAGATTACCATATCTCCATTGGTGTCCAAAGGAGATTCAAAATTTGATCAACTTGAGGCATCTTTATGTTAATCCGTTCATGAAATTTGAGGCTGGGATTTTGGGGCGATTAACTAATCTCCGAACATTACGTTACTTCAACGGGGGTAAGGAGATGGGTCTTGCAATTGAAGAGTTGGGTGGGTTGAATCAATTGAGAGGCCACTTAATTATTGATGAGCTAGAACGTGTAAGGGATGGAGAAGAAGCAAAGAATGCTTGCTTAGTGCAGAAGAGTCACTTACATGAGCTGACATTTAGTTGGACTCACGGCGGGGTAGCTAATGAAAATCAAACTGATGTACTAGATGGCTTGGAACCTCATGGTGAGCTGCAAAGGTTAAACATTGTAAATTTCACACACGGCGGGGTAGCTAATGAAAATCAAGCTGATGTACTAGATGGCTTGGAACCTCATGGTGAGCTGCAAAGGTTAAACATTGAATATTTCATGGGTGATAGATTTCCGTCATGGATAATGAGGCTCCAAAACTTGAAGGAGATTCTATTATTGGGCTGCAACAATTGTGAAGGAGTGCCGACACTCGGCCATCTACCTAATCTAAGATCTCTTGAGATTAATTGGATGGAAAAGCTGAAACGTGTGGGAGAGTTTAATGGTACTCACACACCTTTATTTCCAGCACTGAAAACATTATACATCTTTGGGTGCAAAGAGCTCATTGAATGGATGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03015 ko04022 ko04024 ko04113 ko04114 ko04218 ko04261 ko04270 ko04390 ko04510 ko04611 ko04720 ko04728 ko04750 ko04810 ko04910 ko04921 ko04931 ko05031 ko05034 ko05168 ko05205 map03015 map04022 map04024 map04113 map04114 map04218 map04261 map04270 map04390 map04510 map04611 map04720 map04728 map04750 map04810 map04910 map04921 map04931 map05031 map05034 map05168 map05205

Pfam Domains

Protein Families

Metallophos STPPase_N

Protein Analysis

882

Amino Acids

99.91

Weight (kDa)

6.27

Isoelectric Point (pI)

44.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	22 - 102	1.4e-07	Rx N-terminal domain
NB-ARC	PF00931	193 - 364	2.7e-28	NB-ARC domain
AAA_22	PF13401	207 - 323	9.5e-08	AAA domain
WHD_DRP	PF23559	456 - 528	4.6e-22	Disease resistance protein Winged helix domain
LRR_14	PF23598	568 - 872	3.8e-31	Leucine-rich repeat region
LRR_R13L1-DRL21	PF25019	693 - 769	6.3e-18	R13L1/DRL21 LRRs
LRR_R13L1-DRL21	PF25019	775 - 846	7.2e-19	R13L1/DRL21 LRRs

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43380 AT5G43380 AT5G43380
fragaria_vesca	FvH4_6g09230
malus_domestica	MD04G1179900.v1.1 MD12G1195100.v1.1
prunus_persica	Prupe.6G299800_v2.0.a1 Prupe.6G299800_v2.0.a1
pyrus_communis	pycom04g15910 pycom12g18130
rosa_chinensis	RchiOBHm_Chr3g0459571
rosa_laevigata	RLG00000025079
rosa_multiflora	Rmu_sc0000240.1_g000007
rosa_roxburghii	Rroxscaffold_6G00420180
rosa_rugosa	Rorug03G0036400
rosa_samantha	Rh3DG099000
rosa_wichuraiana	Rw0G013870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1542
AciI	CCGC	7 cut(s)	51, 217, 426, 1172, 1278, 2223, 2316
AclI	AACGTT	1 cut(s)	659
AclWI	GGATC	7 cut(s)	27, 40, 301, 314, 390, 1387, 1644
AcoI	YGGCCR	3 cut(s)	624, 850, 2497
AcsI	RAATTY	8 cut(s)	172, 296, 518, 1577, 1807, 1951, 1994, 2302
AcuI	CTGAAG	2 cut(s)	347, 1844
AcyI	GRCGYC	1 cut(s)	1539
AfaI	GTAC	4 cut(s)	885, 2253, 2346, 2572
AfiI	CCNNNNNNNGG	4 cut(s)	207, 208, 316, 2495
AflII	CTTAAG	1 cut(s)	1771
AflIII	ACRYGT	3 cut(s)	1765, 2137, 2551
AjnI	CCWGG	2 cut(s)	1595, 1725
Alw21I	GWGCWC	2 cut(s)	147, 2631
Alw26I	GTCTC	2 cut(s)	1735, 1784
AlwI	GGATC	7 cut(s)	27, 40, 301, 314, 390, 1387, 1644
AlwNI	CAGNNNCTG	1 cut(s)	428
Ama87I	CYCGRG	1 cut(s)	825
AoxI	GGCC	4 cut(s)	624, 850, 2110, 2497
ApeKI	GCWGC	9 cut(s)	53, 188, 263, 422, 966, 1658, 2281, 2374, 2466
ApoI	RAATTY	8 cut(s)	172, 296, 518, 1577, 1807, 1951, 1994, 2302
AseI	ATTAAT	1 cut(s)	2529
Asp700I	GAANNNNTTC	1 cut(s)	300
AspLEI	GCGC	1 cut(s)	193
AspS9I	GGNCC	1 cut(s)	1065
AsuHPI	GGTGA	9 cut(s)	470, 631, 716, 1314, 1427, 1537, 2288, 2381, 2417
AvaI	CYCGRG	1 cut(s)	825
AvaII	GGWCC	1 cut(s)	1065
BamHI	GGATCC	2 cut(s)	32, 306
BanII	GRGCYC	2 cut(s)	147, 2631
BarI	GAAGNNNNNNTAC	2 cut(s)	64, 96
BbsI	GAAGAC	3 cut(s)	109, 353, 1154
Bbv12I	GWGCWC	2 cut(s)	147, 2631
BbvI	GCAGC	9 cut(s)	40, 175, 250, 434, 978, 1645, 2268, 2361, 2453
BceAI	ACGGC	3 cut(s)	611, 2236, 2329
BcgI	CGANNNNNNTGC	2 cut(s)	334, 368
BciT130I	CCWGG	2 cut(s)	1597, 1727
BciVI	GTATCC	2 cut(s)	333, 1603
BclI	TGATCA	3 cut(s)	94, 1054, 1956
BcoDI	GTCTC	2 cut(s)	1735, 1784
BfaI	CTAG	8 cut(s)	194, 950, 1037, 1676, 1841, 2132, 2255, 2348
BfmI	CTRYAG	3 cut(s)	264, 479, 941
BfrI	CTTAAG	1 cut(s)	1771
BfuI	GTATCC	2 cut(s)	333, 1603
BglII	AGATCT	2 cut(s)	1843, 2516
Bme1390I	CCNGG	2 cut(s)	1597, 1727
Bme18I	GGWCC	1 cut(s)	1065
BmeT110I	CYCGRG	1 cut(s)	825
BmgT120I	GGNCC	1 cut(s)	1065
BmiI	GGNNCC	7 cut(s)	34, 308, 909, 1369, 2268, 2361, 2435
BmrFI	CCNGG	2 cut(s)	1597, 1727
BmsI	GCATC	8 cut(s)	175, 473, 523, 600, 1185, 1507, 1548, 1978
BpiI	GAAGAC	3 cut(s)	109, 353, 1154
BpmI	CTGGAG	1 cut(s)	1886
BpuEI	CTTGAG	6 cut(s)	527, 1395, 1779, 1852, 1984, 2543
BsaAI	YACGTR	2 cut(s)	779, 1766
BsaHI	GRCGYC	1 cut(s)	1539
BsaI	GGTCTC	1 cut(s)	1735
BsaJI	CCNNGG	2 cut(s)	399, 847
BsaXI	ACNNNNNCTCC	4 cut(s)	51, 81, 1908, 1938
Bsc4I	CCNNNNNNNGG	4 cut(s)	207, 208, 316, 2495
Bse1I	ACTGG	3 cut(s)	236, 468, 1500
Bse3DI	GCAATG	3 cut(s)	500, 535, 1480
BseBI	CCWGG	2 cut(s)	1597, 1727
BseDI	CCNNGG	2 cut(s)	399, 847
BseLI	CCNNNNNNNGG	4 cut(s)	207, 208, 316, 2495
BseMI	GCAATG	3 cut(s)	500, 535, 1480
BseNI	ACTGG	3 cut(s)	236, 468, 1500
BseRI	GAGGAG	3 cut(s)	75, 947, 1422
BseXI	GCAGC	9 cut(s)	40, 175, 250, 434, 978, 1645, 2268, 2361, 2453
BseYI	CCCAGC	1 cut(s)	2003
BsgI	GTGCAG	2 cut(s)	1644, 2198
BshFI	GGCC	4 cut(s)	626, 852, 2112, 2499
BsiHKAI	GWGCWC	2 cut(s)	147, 2631
BsiHKCI	CYCGRG	1 cut(s)	825
BsiSI	CCGG	1 cut(s)	57
BslFI	GGGAC	2 cut(s)	447, 1054
BslI	CCNNNNNNNGG	4 cut(s)	207, 208, 316, 2495
BsmAI	GTCTC	2 cut(s)	1735, 1784
BsmFI	GGGAC	2 cut(s)	447, 1054
BsmI	GAATGC	4 cut(s)	789, 1198, 1556, 2170
BsnI	GGCC	4 cut(s)	626, 852, 2112, 2499
Bso31I	GGTCTC	1 cut(s)	1735
BsoBI	CYCGRG	1 cut(s)	825
Bsp1286I	GDGCHC	2 cut(s)	147, 2631
BspACI	CCGC	7 cut(s)	51, 217, 426, 1172, 1278, 2223, 2316
BspANI	GGCC	4 cut(s)	626, 852, 2112, 2499
BspHI	TCATGA	1 cut(s)	1989
BspLI	GGNNCC	7 cut(s)	34, 308, 909, 1369, 2268, 2361, 2435
BspMAI	CTGCAG	3 cut(s)	268, 483, 945
BspPI	GGATC	7 cut(s)	27, 40, 301, 314, 390, 1387, 1644
BspTI	CTTAAG	1 cut(s)	1771
BspTNI	GGTCTC	1 cut(s)	1735
BsrDI	GCAATG	3 cut(s)	500, 535, 1480
BsrI	ACTGG	3 cut(s)	236, 468, 1500
BssECI	CCNNGG	2 cut(s)	399, 847
BssNI	GRCGYC	1 cut(s)	1539
BssT1I	CCWWGG	1 cut(s)	399
Bst2UI	CCWGG	2 cut(s)	1597, 1727
Bst4CI	ACNGT	2 cut(s)	253, 973
Bst6I	CTCTTC	4 cut(s)	233, 1129, 2076, 2177
BstACI	GRCGYC	1 cut(s)	1539
BstAFI	CTTAAG	1 cut(s)	1771
BstAPI	GCANNNNNTGC	1 cut(s)	2165
BstBAI	YACGTR	2 cut(s)	779, 1766
BstC8I	GCNNGC	7 cut(s)	219, 373, 643, 667, 671, 1889, 2170
BstDEI	CTNAG	3 cut(s)	162, 2173, 2513
BstHHI	GCGC	1 cut(s)	193
BstMAI	GTCTC	2 cut(s)	1735, 1784
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 62, 86, 263, 679, 688, 809, 2165
BstNI	CCWGG	2 cut(s)	1597, 1727
BstNSI	RCATGY	1 cut(s)	1658
BstSCI	CCNGG	2 cut(s)	1595, 1725
BstSFI	CTRYAG	3 cut(s)	264, 479, 941
BstV1I	GCAGC	9 cut(s)	40, 175, 250, 434, 978, 1645, 2268, 2361, 2453
BstV2I	GAAGAC	3 cut(s)	109, 353, 1154
BstX2I	RGATCY	5 cut(s)	32, 306, 395, 1843, 2516
BstYI	RGATCY	5 cut(s)	32, 306, 395, 1843, 2516
BsuI	GTATCC	2 cut(s)	333, 1603
BsuRI	GGCC	4 cut(s)	626, 852, 2112, 2499
BtsI	GCAGTG	2 cut(s)	72, 1700
BtsIMutI	CAGTG	4 cut(s)	72, 1064, 1700, 2594
Cac8I	GCNNGC	7 cut(s)	219, 373, 643, 667, 671, 1889, 2170
CaiI	CAGNNNCTG	1 cut(s)	428
CciI	TCATGA	1 cut(s)	1989
CfoI	GCGC	1 cut(s)	193
Cfr13I	GGNCC	1 cut(s)	1065
Csp6I	GTAC	4 cut(s)	884, 2252, 2345, 2571
CviQI	GTAC	4 cut(s)	884, 2252, 2345, 2571
DdeI	CTNAG	3 cut(s)	162, 2173, 2513
DraI	TTTAAA	1 cut(s)	1317
EaeI	YGGCCR	3 cut(s)	624, 850, 2497
Eam1104I	CTCTTC	4 cut(s)	233, 1129, 2076, 2177
EarI	CTCTTC	4 cut(s)	233, 1129, 2076, 2177
Ecl136II	GAGCTC	2 cut(s)	145, 2629
Eco130I	CCWWGG	1 cut(s)	399
Eco24I	GRGCYC	2 cut(s)	147, 2631
Eco31I	GGTCTC	1 cut(s)	1735
Eco47I	GGWCC	1 cut(s)	1065
Eco53kI	GAGCTC	2 cut(s)	145, 2629
Eco57I	CTGAAG	2 cut(s)	347, 1844
Eco88I	CYCGRG	1 cut(s)	825
EcoICRI	GAGCTC	2 cut(s)	145, 2629
EcoRI	GAATTC	1 cut(s)	518
EcoRII	CCWGG	2 cut(s)	1595, 1725
EcoT14I	CCWWGG	1 cut(s)	399
EcoT22I	ATGCAT	2 cut(s)	1200, 1563
EcoT38I	GRGCYC	2 cut(s)	147, 2631
ErhI	CCWWGG	1 cut(s)	399
FalI	AAGNNNNNCTT	2 cut(s)	2174, 2206
FaqI	GGGAC	2 cut(s)	447, 1054
FauI	CCCGC	3 cut(s)	210, 2216, 2309
FbaI	TGATCA	3 cut(s)	94, 1054, 1956
FriOI	GRGCYC	2 cut(s)	147, 2631
FspBI	CTAG	8 cut(s)	194, 950, 1037, 1676, 1841, 2132, 2255, 2348
GlaI	GCGC	1 cut(s)	192
GsaI	CCCAGC	1 cut(s)	2007
GsuI	CTGGAG	1 cut(s)	1886
HaeIII	GGCC	4 cut(s)	626, 852, 2112, 2499
HapII	CCGG	1 cut(s)	57
HhaI	GCGC	1 cut(s)	193
Hin1I	GRCGYC	1 cut(s)	1539
Hin6I	GCGC	1 cut(s)	191
HinP1I	GCGC	1 cut(s)	191
HincII	GTYRAC	1 cut(s)	766
HindII	GTYRAC	1 cut(s)	766
HindIII	AAGCTT	2 cut(s)	1189, 1889
HpaII	CCGG	1 cut(s)	57
HphI	GGTGA	9 cut(s)	470, 631, 716, 1314, 1427, 1537, 2288, 2381, 2417
Hpy166II	GTNNAC	2 cut(s)	766, 1709
Hpy188I	TCNGA	9 cut(s)	306, 366, 1117, 1133, 1296, 1629, 1696, 1865, 2033
Hpy8I	GTNNAC	2 cut(s)	766, 1709
Hpy99I	CGWCG	1 cut(s)	1220
HpyAV	CCTTC	7 cut(s)	53, 543, 695, 1113, 1437, 2440, 2474
HpyCH4III	ACNGT	2 cut(s)	253, 973
HpyCH4IV	ACGT	8 cut(s)	659, 778, 1539, 1765, 1907, 2041, 2137, 2551
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 62, 86, 263, 679, 688, 809, 2165
HpyF3I	CTNAG	3 cut(s)	162, 2173, 2513
HpySE526I	ACGT	8 cut(s)	659, 778, 1539, 1765, 1907, 2041, 2137, 2551
Hsp92I	GRCGYC	1 cut(s)	1539
HspAI	GCGC	1 cut(s)	191
Ksp22I	TGATCA	3 cut(s)	94, 1054, 1956
LmnI	GCTCC	2 cut(s)	62, 2439
Lsp1109I	GCAGC	9 cut(s)	40, 175, 250, 434, 978, 1645, 2268, 2361, 2453
LweI	GCATC	8 cut(s)	175, 473, 523, 600, 1185, 1507, 1548, 1978
MaeI	CTAG	8 cut(s)	194, 950, 1037, 1676, 1841, 2132, 2255, 2348
MaeII	ACGT	8 cut(s)	659, 778, 1539, 1765, 1907, 2041, 2137, 2551
MaeIII	GTNAC	5 cut(s)	727, 979, 1320, 2042, 2186
MfeI	CAATTG	4 cut(s)	98, 2076, 2102, 2473
MflI	RGATCY	5 cut(s)	32, 306, 395, 1843, 2516
MhlI	GDGCHC	2 cut(s)	147, 2631
MlyI	GAGTC	5 cut(s)	1036, 1786, 1886, 2194, 2209
MmeI	TCCRAC	3 cut(s)	526, 1420, 2192
Mph1103I	ATGCAT	2 cut(s)	1200, 1563
MroXI	GAANNNNTTC	1 cut(s)	300
MslI	CAYNNNNRTG	2 cut(s)	1974, 2193
MspA1I	CMGCKG	2 cut(s)	53, 428
MspCI	CTTAAG	1 cut(s)	1771
MspI	CCGG	1 cut(s)	57
MspR9I	CCNGG	2 cut(s)	1597, 1727
MunI	CAATTG	4 cut(s)	98, 2076, 2102, 2473
Mva1269I	GAATGC	4 cut(s)	789, 1198, 1556, 2170
MvaI	CCWGG	2 cut(s)	1597, 1727
MwoI	GCNNNNNNNGC	8 cut(s)	11, 62, 86, 263, 679, 688, 809, 2165
NlaIV	GGNNCC	7 cut(s)	34, 308, 909, 1369, 2268, 2361, 2435
NmeAIII	GCCGAG	2 cut(s)	828, 2475
NmuCI	GTSAC	3 cut(s)	979, 1320, 2186
NsiI	ATGCAT	2 cut(s)	1200, 1563
NspI	RCATGY	1 cut(s)	1658
PagI	TCATGA	1 cut(s)	1989
PcsI	WCGNNNNNNNCGW	1 cut(s)	1545
PctI	GAATGC	4 cut(s)	789, 1198, 1556, 2170
PdmI	GAANNNNTTC	1 cut(s)	300
PleI	GAGTC	5 cut(s)	1036, 1786, 1885, 2193, 2209
PpsI	GAGTC	5 cut(s)	1036, 1786, 1885, 2193, 2209
Ppu21I	YACGTR	2 cut(s)	779, 1766
PshBI	ATTAAT	1 cut(s)	2529
Psp124BI	GAGCTC	2 cut(s)	147, 2631
Psp1406I	AACGTT	1 cut(s)	659
Psp6I	CCWGG	2 cut(s)	1595, 1725
PspFI	CCCAGC	1 cut(s)	2003
PspGI	CCWGG	2 cut(s)	1595, 1725
PspN4I	GGNNCC	7 cut(s)	34, 308, 909, 1369, 2268, 2361, 2435
PspPI	GGNCC	1 cut(s)	1065
PstI	CTGCAG	3 cut(s)	268, 483, 945
PstNI	CAGNNNCTG	1 cut(s)	428
PsuI	RGATCY	5 cut(s)	32, 306, 395, 1843, 2516
RsaI	GTAC	4 cut(s)	885, 2253, 2346, 2572
RsaNI	GTAC	4 cut(s)	884, 2252, 2345, 2571
RseI	CAYNNNNRTG	2 cut(s)	1974, 2193
SacI	GAGCTC	2 cut(s)	147, 2631
Sau96I	GGNCC	1 cut(s)	1065
SchI	GAGTC	5 cut(s)	1036, 1786, 1886, 2194, 2209
ScrFI	CCNGG	2 cut(s)	1597, 1727
SduI	GDGCHC	2 cut(s)	147, 2631
SfaNI	GCATC	8 cut(s)	175, 473, 523, 600, 1185, 1507, 1548, 1978
SfcI	CTRYAG	3 cut(s)	264, 479, 941
SinI	GGWCC	1 cut(s)	1065
SmiMI	CAYNNNNRTG	2 cut(s)	1974, 2193
SmlI	CTYRAG	7 cut(s)	506, 1410, 1771, 1794, 1831, 1963, 2522
SmoI	CTYRAG	7 cut(s)	506, 1410, 1771, 1794, 1831, 1963, 2522
SsiI	CCGC	7 cut(s)	51, 217, 426, 1172, 1278, 2223, 2316
SspI	AATATT	2 cut(s)	1093, 2396
SspMI	CTAG	8 cut(s)	194, 950, 1037, 1676, 1841, 2132, 2255, 2348
SstI	GAGCTC	2 cut(s)	147, 2631
StyD4I	CCNGG	2 cut(s)	1595, 1725
StyI	CCWWGG	1 cut(s)	399
TaaI	ACNGT	2 cut(s)	253, 973
TaiI	ACGT	8 cut(s)	662, 781, 1542, 1768, 1910, 2044, 2140, 2554
TaqI	TCGA	5 cut(s)	330, 913, 1106, 1359, 1651
TatI	WGTACW	3 cut(s)	883, 2251, 2344
TauI	GCSGC	2 cut(s)	428, 1175
TscAI	CASTG	4 cut(s)	72, 1064, 1707, 2601
TseFI	GTSAC	3 cut(s)	979, 1320, 2186
TseI	GCWGC	9 cut(s)	53, 188, 263, 422, 966, 1658, 2281, 2374, 2466
Tsp45I	GTSAC	3 cut(s)	979, 1320, 2186
TspGWI	ACGGA	2 cut(s)	1974, 2406
TspRI	CASTG	4 cut(s)	72, 1064, 1707, 2601
Vha464I	CTTAAG	1 cut(s)	1771
VpaK11BI	GGWCC	1 cut(s)	1065
VspI	ATTAAT	1 cut(s)	2529
XapI	RAATTY	8 cut(s)	172, 296, 518, 1577, 1807, 1951, 1994, 2302
XbaI	TCTAGA	3 cut(s)	949, 1675, 1840
XceI	RCATGY	1 cut(s)	1658
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1926
XmnI	GAANNNNTTC	1 cut(s)	300
XspI	CTAG	8 cut(s)	194, 950, 1037, 1676, 1841, 2132, 2255, 2348
ZraI	GACGTC	1 cut(s)	1540
Zsp2I	ATGCAT	2 cut(s)	1200, 1563

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.