Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0009868

Physical Location & Seq

Genomic Coordinates Reverse (-)

28966133 .. 28968830

Gene Structure 2698 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G332800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGGCTGGGACCAACGAAGTCAACGTTAATGAATCCAGGACGGTGGTTCCATTGAATACATGGGTCCTCATCTCCAATTTCAAGTTGTCTTACAATCTTCTTCGTCGACCTGATGGGACTTTTAACCGTCACTTGGCAGAATTCCTTGATCGGAAAGTGCCAGCCAATGCAAAACCAGTTGATGGGGTTGTCTCATTTGATGTCATCATTGACCGTGAAACTGGCCTGCTTACTCGAATCTATCAACCAGCCAATGCTGAAGAATCTGTGCTGAATATTCTTAATCTTGACAAACCTGTGAGCAATGAGGTGGTGCCTGTCATAATTTTCTTCCATGGTGGAAGCTTTGCACACTCCTCTGCTAACAGTGGCATATATGATATTCTGTGCCGCCGACTAGTTGGTATTTGCAAGGCTGTAGTGGTCTCTGTAAATTACCGCCGGGCACCTGAAAATCGATTTCCTTGTGCCTATGATGATGGATGGACAGCCCTGCAGTGGGTCAACTCTAGATCGTGGCTTAAAAGTACAAAGGACTCAAAAGTTCATATATATCTTGCTGGTGATAGCTCTGGTGGGAACATTGTACACAATGTTGCTTTAAGAGCAGTAGAATCTGGAATTGATGTATTGGGAAATATACTGCTCAACCCAATGTTTGGGGGGCAGGAGAGAACTGAATCTGAGAAGCGATTGGACGGGAAATACTTTGTCACCATCCAAGACCGGGACTGGTATTGGAGAGCTTTTCTCCCTGAAGGGGAAGACAGGGACCACCCGGCATGTAACCCATTTGGTCCAAGGGGTAATAACCTTGAAGCTATCAAGTTCCCAAAGAGTCTTGTCGTGGTGGCTGGTTTGGATCTTGTTCAGGACTGGCAATTGGCTTATGCTAAAGGGCTTGAGAAGGCTGGCAAAAACATCAAACTTATGTATCTTGAGCAGGCCACAATTGGTTTCTACTTGCTGCCAAATAATGACCATTTCTACACCGTGATGGATGAGATAAGTAAATTTGTGTGTTCCAACTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005975 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009311 GO:0009312 GO:0009653 GO:0009719 GO:0009725 GO:0009739 GO:0009755 GO:0009791 GO:0009892 GO:0009908 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010154 GO:0010325 GO:0010331 GO:0010468 GO:0010476 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0016051 GO:0016787 GO:0019222 GO:0019840 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0031406 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036094 GO:0042221 GO:0042562 GO:0043167 GO:0043168 GO:0043177 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044238 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048518 GO:0048519 GO:0048522 GO:0048530 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0080154 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1901576 GO:1901700 GO:1901701 GO:1905392 GO:1905516 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Abhydrolase_3

Protein Analysis

345

Amino Acids

38.6

Weight (kDa)

6.4

Isoelectric Point (pI)

45.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009868)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05120 AT5G27320
fragaria_vesca	FvH4_6g04960 FvH4_6g04960 FvH4_6g04960 FvH4_6g04960
malus_domestica	MD04G1212400.v1.1 MD07G1046000.v1.1 MD12G1227200.v1.1
prunus_persica	Prupe.6G332800_v2.0.a1
pyrus_communis	pycom04g18850
rosa_chinensis	RchiOBHm_Chr3g0453451
rosa_laevigata	RLG00000025513
rosa_multiflora	Rmu_sc0000510.1_g000008
rosa_roxburghii	Rroxscaffold_6G00430420
rosa_rugosa	Rorug02G0649200
rosa_samantha	Rh3AG051900 Rh3BG053400 Rh3CG052700 Rh3DG053500
rosa_wichuraiana	Rw3G004000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	313, 445
AccB7I	CCANNNNNTGG	2 cut(s)	182, 659
AccI	GTMKAC	1 cut(s)	106
AciI	CCGC	2 cut(s)	391, 439
AclI	AACGTT	1 cut(s)	24
AclWI	GGATC	1 cut(s)	870
AcsI	RAATTY	2 cut(s)	140, 1013
AcuI	CTGAAG	2 cut(s)	279, 777
AfaI	GTAC	2 cut(s)	529, 588
AfiI	CCNNNNNNNGG	7 cut(s)	133, 182, 498, 499, 659, 727, 760
AgsI	TTSAA	3 cut(s)	55, 82, 818
AhlI	ACTAGT	1 cut(s)	397
AjnI	CCWGG	1 cut(s)	35
AluBI	AGCT	4 cut(s)	345, 570, 746, 821
AluI	AGCT	4 cut(s)	345, 570, 746, 821
Alw26I	GTCTC	2 cut(s)	196, 430
AlwI	GGATC	1 cut(s)	870
AoxI	GGCC	2 cut(s)	223, 945
ApeKI	GCWGC	1 cut(s)	967
ApoI	RAATTY	2 cut(s)	140, 1013
AspS9I	GGNCC	4 cut(s)	9, 64, 772, 797
AsuC2I	CCSGG	3 cut(s)	443, 728, 779
AsuHPI	GGTGA	2 cut(s)	575, 706
AvaII	GGWCC	4 cut(s)	9, 64, 772, 797
BaeGI	GKGCMC	1 cut(s)	448
BaeI	ACNNNNGTAYC	2 cut(s)	917, 950
BanI	GGYRCC	2 cut(s)	313, 445
BbsI	GAAGAC	1 cut(s)	771
BbvI	GCAGC	1 cut(s)	954
BccI	CCATC	6 cut(s)	107, 176, 473, 477, 725, 991
BciT130I	CCWGG	1 cut(s)	37
BcnI	CCSGG	3 cut(s)	443, 728, 779
BcoDI	GTCTC	2 cut(s)	196, 430
BcuI	ACTAGT	1 cut(s)	397
BfaI	CTAG	2 cut(s)	398, 510
BfmI	CTRYAG	2 cut(s)	417, 494
BisI	GCNGC	2 cut(s)	391, 968
BlsI	GCNGC	2 cut(s)	392, 969
Bme1390I	CCNGG	4 cut(s)	37, 443, 728, 779
Bme18I	GGWCC	4 cut(s)	9, 64, 772, 797
BmgT120I	GGNCC	4 cut(s)	9, 64, 772, 797
BmiI	GGNNCC	6 cut(s)	10, 48, 65, 315, 447, 773
BmrFI	CCNGG	4 cut(s)	37, 443, 728, 779
BpiI	GAAGAC	1 cut(s)	771
BplI	GAGNNNNNCTC	2 cut(s)	735, 767
BpuEI	CTTGAG	2 cut(s)	923, 959
BpuMI	CCSGG	3 cut(s)	443, 728, 779
Bsa29I	ATCGAT	1 cut(s)	457
BsaI	GGTCTC	1 cut(s)	430
BsaJI	CCNNGG	2 cut(s)	334, 800
Bsc4I	CCNNNNNNNGG	7 cut(s)	133, 182, 498, 499, 659, 727, 760
Bse1I	ACTGG	4 cut(s)	176, 226, 737, 881
Bse3DI	GCAATG	1 cut(s)	310
BseBI	CCWGG	1 cut(s)	37
BseCI	ATCGAT	1 cut(s)	457
BseDI	CCNNGG	2 cut(s)	334, 800
BseGI	GGATG	3 cut(s)	488, 717, 1006
BseLI	CCNNNNNNNGG	7 cut(s)	133, 182, 498, 499, 659, 727, 760
BseMI	GCAATG	1 cut(s)	310
BseMII	CTCAG	1 cut(s)	675
BseNI	ACTGG	4 cut(s)	176, 226, 737, 881
BseRI	GAGGAG	1 cut(s)	346
BseSI	GKGCMC	1 cut(s)	448
BseXI	GCAGC	1 cut(s)	954
BseYI	CCCAGC	1 cut(s)	5
BshFI	GGCC	2 cut(s)	225, 947
BshNI	GGYRCC	2 cut(s)	313, 445
BshVI	ATCGAT	1 cut(s)	457
BsiSI	CCGG	3 cut(s)	442, 727, 779
BslFI	GGGAC	4 cut(s)	22, 130, 743, 785
BslI	CCNNNNNNNGG	7 cut(s)	133, 182, 498, 499, 659, 727, 760
BsmAI	GTCTC	2 cut(s)	196, 430
BsmFI	GGGAC	4 cut(s)	22, 130, 743, 785
BsnI	GGCC	2 cut(s)	225, 947
Bso31I	GGTCTC	1 cut(s)	430
Bsp1286I	GDGCHC	1 cut(s)	448
Bsp1407I	TGTACA	1 cut(s)	586
Bsp143I	GATC	3 cut(s)	148, 512, 862
Bsp19I	CCATGG	1 cut(s)	334
BspACI	CCGC	2 cut(s)	391, 439
BspANI	GGCC	2 cut(s)	225, 947
BspCNI	CTCAG	1 cut(s)	676
BspDI	ATCGAT	1 cut(s)	457
BspLI	GGNNCC	6 cut(s)	10, 48, 65, 315, 447, 773
BspMAI	CTGCAG	1 cut(s)	498
BspPI	GGATC	1 cut(s)	870
BspT107I	GGYRCC	2 cut(s)	313, 445
BspTNI	GGTCTC	1 cut(s)	430
BsrDI	GCAATG	1 cut(s)	310
BsrGI	TGTACA	1 cut(s)	586
BsrI	ACTGG	4 cut(s)	176, 226, 737, 881
BssECI	CCNNGG	2 cut(s)	334, 800
BssMI	GATC	3 cut(s)	148, 512, 862
BssT1I	CCWWGG	2 cut(s)	334, 800
Bst2UI	CCWGG	1 cut(s)	37
Bst4CI	ACNGT	6 cut(s)	43, 128, 215, 368, 994, 1031
BstAUI	TGTACA	1 cut(s)	586
BstC8I	GCNNGC	4 cut(s)	162, 227, 913, 945
BstDEI	CTNAG	1 cut(s)	684
BstDSI	CCRYGG	1 cut(s)	334
BstF5I	GGATG	3 cut(s)	488, 717, 1006
BstKTI	GATC	3 cut(s)	151, 515, 865
BstMAI	GTCTC	2 cut(s)	196, 430
BstMBI	GATC	3 cut(s)	148, 512, 862
BstMWI	GCNNNNNNNGC	1 cut(s)	605
BstNI	CCWGG	1 cut(s)	37
BstNSI	RCATGY	1 cut(s)	786
BstSCI	CCNGG	4 cut(s)	35, 441, 726, 777
BstSFI	CTRYAG	2 cut(s)	417, 494
BstSLI	GKGCMC	1 cut(s)	448
BstV1I	GCAGC	1 cut(s)	954
BstV2I	GAAGAC	1 cut(s)	771
BstX2I	RGATCY	1 cut(s)	862
BstXI	CCANNNNNNTGG	1 cut(s)	43
BstYI	RGATCY	1 cut(s)	862
Bsu15I	ATCGAT	1 cut(s)	457
BsuRI	GGCC	2 cut(s)	225, 947
BsuTUI	ATCGAT	1 cut(s)	457
BtgI	CCRYGG	1 cut(s)	334
BtsCI	GGATG	3 cut(s)	488, 717, 1006
BtsI	GCAGTG	1 cut(s)	503
BtsIMutI	CAGTG	2 cut(s)	373, 503
Cac8I	GCNNGC	4 cut(s)	162, 227, 913, 945
Cfr13I	GGNCC	4 cut(s)	9, 64, 772, 797
ClaI	ATCGAT	1 cut(s)	457
Csp6I	GTAC	2 cut(s)	528, 587
CviAII	CATG	3 cut(s)	60, 335, 783
CviQI	GTAC	2 cut(s)	528, 587
DdeI	CTNAG	1 cut(s)	684
DpnI	GATC	3 cut(s)	150, 514, 864
DpnII	GATC	3 cut(s)	148, 512, 862
Eco130I	CCWWGG	2 cut(s)	334, 800
Eco31I	GGTCTC	1 cut(s)	430
Eco47I	GGWCC	4 cut(s)	9, 64, 772, 797
Eco57I	CTGAAG	2 cut(s)	279, 777
EcoO109I	RGGNCCY	1 cut(s)	64
EcoRI	GAATTC	1 cut(s)	140
EcoRII	CCWGG	1 cut(s)	35
EcoT14I	CCWWGG	2 cut(s)	334, 800
ErhI	CCWWGG	2 cut(s)	334, 800
FaeI	CATG	3 cut(s)	63, 338, 786
FaqI	GGGAC	4 cut(s)	22, 130, 743, 785
FatI	CATG	3 cut(s)	59, 334, 782
FblI	GTMKAC	1 cut(s)	106
Fnu4HI	GCNGC	2 cut(s)	391, 968
FokI	GGATG	3 cut(s)	495, 704, 1013
Fsp4HI	GCNGC	2 cut(s)	391, 968
FspBI	CTAG	2 cut(s)	398, 510
GluI	GCNGC	2 cut(s)	391, 968
GsaI	CCCAGC	1 cut(s)	9
HaeIII	GGCC	2 cut(s)	225, 947
HapII	CCGG	3 cut(s)	442, 727, 779
Hin1II	CATG	3 cut(s)	63, 338, 786
HincII	GTYRAC	3 cut(s)	22, 107, 505
HindII	GTYRAC	3 cut(s)	22, 107, 505
HindIII	AAGCTT	1 cut(s)	343
HinfI	GANTC	7 cut(s)	32, 237, 263, 536, 614, 680, 838
HpaII	CCGG	3 cut(s)	442, 727, 779
HphI	GGTGA	2 cut(s)	575, 706
Hpy166II	GTNNAC	4 cut(s)	22, 107, 505, 589
Hpy188I	TCNGA	2 cut(s)	153, 685
Hpy188III	TCNNGA	5 cut(s)	287, 510, 618, 872, 938
Hpy8I	GTNNAC	4 cut(s)	22, 107, 505, 589
Hpy99I	CGWCG	1 cut(s)	108
HpyAV	CCTTC	2 cut(s)	752, 901
HpyCH4III	ACNGT	6 cut(s)	43, 128, 215, 368, 994, 1031
HpyCH4IV	ACGT	1 cut(s)	24
HpyCH4V	TGCA	4 cut(s)	170, 350, 411, 496
HpyF10VI	GCNNNNNNNGC	1 cut(s)	605
HpyF3I	CTNAG	1 cut(s)	684
HpySE526I	ACGT	1 cut(s)	24
Hsp92II	CATG	3 cut(s)	63, 338, 786
Kzo9I	GATC	3 cut(s)	148, 512, 862
Lsp1109I	GCAGC	1 cut(s)	954
MaeI	CTAG	2 cut(s)	398, 510
MaeII	ACGT	1 cut(s)	24
MaeIII	GTNAC	3 cut(s)	128, 712, 785
MalI	GATC	3 cut(s)	150, 514, 864
MboI	GATC	3 cut(s)	148, 512, 862
MboII	GAAGA	5 cut(s)	89, 92, 272, 322, 776
MfeI	CAATTG	2 cut(s)	881, 951
MflI	RGATCY	1 cut(s)	862
MhlI	GDGCHC	1 cut(s)	448
MluCI	AATT	8 cut(s)	76, 140, 324, 433, 621, 881, 951, 1013
MlyI	GAGTC	2 cut(s)	530, 847
MnlI	CCTC	3 cut(s)	77, 301, 367
MseI	TTAA	6 cut(s)	27, 123, 282, 522, 602, 1033
MslI	CAYNNNNRTG	1 cut(s)	995
MspI	CCGG	3 cut(s)	442, 727, 779
MspR9I	CCNGG	4 cut(s)	37, 443, 728, 779
MunI	CAATTG	2 cut(s)	881, 951
MvaI	CCWGG	1 cut(s)	37
MwoI	GCNNNNNNNGC	1 cut(s)	605
NciI	CCSGG	3 cut(s)	443, 728, 779
NcoI	CCATGG	1 cut(s)	334
NdeII	GATC	3 cut(s)	148, 512, 862
NlaIII	CATG	3 cut(s)	63, 338, 786
NlaIV	GGNNCC	6 cut(s)	10, 48, 65, 315, 447, 773
NmuCI	GTSAC	2 cut(s)	128, 712
NspI	RCATGY	1 cut(s)	786
PcsI	WCGNNNNNNNCGW	1 cut(s)	21
PfeI	GAWTC	5 cut(s)	32, 237, 263, 614, 680
PflMI	CCANNNNNTGG	2 cut(s)	182, 659
PfoI	TCCNGGA	1 cut(s)	35
PkrI	GCNGC	2 cut(s)	392, 969
PleI	GAGTC	2 cut(s)	530, 846
PpsI	GAGTC	2 cut(s)	530, 846
PpuMI	RGGWCCY	1 cut(s)	64
Psp1406I	AACGTT	1 cut(s)	24
Psp5II	RGGWCCY	1 cut(s)	64
Psp6I	CCWGG	1 cut(s)	35
PspFI	CCCAGC	1 cut(s)	5
PspGI	CCWGG	1 cut(s)	35
PspN4I	GGNNCC	6 cut(s)	10, 48, 65, 315, 447, 773
PspPI	GGNCC	4 cut(s)	9, 64, 772, 797
PspPPI	RGGWCCY	1 cut(s)	64
PstI	CTGCAG	1 cut(s)	498
PsuI	RGATCY	1 cut(s)	862
RsaI	GTAC	2 cut(s)	529, 588
RsaNI	GTAC	2 cut(s)	528, 587
RseI	CAYNNNNRTG	1 cut(s)	995
SalI	GTCGAC	1 cut(s)	105
SaqAI	TTAA	6 cut(s)	27, 123, 282, 522, 602, 1033
SatI	GCNGC	2 cut(s)	391, 968
Sau3AI	GATC	3 cut(s)	148, 512, 862
Sau96I	GGNCC	4 cut(s)	9, 64, 772, 797
SchI	GAGTC	2 cut(s)	530, 847
ScrFI	CCNGG	4 cut(s)	37, 443, 728, 779
SduI	GDGCHC	1 cut(s)	448
SfcI	CTRYAG	2 cut(s)	417, 494
SinI	GGWCC	4 cut(s)	9, 64, 772, 797
SmiMI	CAYNNNNRTG	1 cut(s)	995
SmlI	CTYRAG	2 cut(s)	902, 938
SmoI	CTYRAG	2 cut(s)	902, 938
SpeI	ACTAGT	1 cut(s)	397
Sse9I	AATT	8 cut(s)	76, 140, 324, 433, 621, 881, 951, 1013
SsiI	CCGC	2 cut(s)	391, 439
SspI	AATATT	1 cut(s)	277
SspMI	CTAG	2 cut(s)	398, 510
StyD4I	CCNGG	4 cut(s)	35, 441, 726, 777
StyI	CCWWGG	2 cut(s)	334, 800
TaaI	ACNGT	6 cut(s)	43, 128, 215, 368, 994, 1031
TaiI	ACGT	1 cut(s)	27
TaqI	TCGA	3 cut(s)	106, 235, 457
TasI	AATT	8 cut(s)	76, 140, 324, 433, 621, 881, 951, 1013
TatI	WGTACW	2 cut(s)	527, 586
TauI	GCSGC	1 cut(s)	393
TfiI	GAWTC	5 cut(s)	32, 237, 263, 614, 680
Tru1I	TTAA	6 cut(s)	27, 123, 282, 522, 602, 1033
Tru9I	TTAA	6 cut(s)	27, 123, 282, 522, 602, 1033
TscAI	CASTG	2 cut(s)	373, 503
TseFI	GTSAC	2 cut(s)	128, 712
TseI	GCWGC	1 cut(s)	967
Tsp45I	GTSAC	2 cut(s)	128, 712
TspDTI	ATGAA	2 cut(s)	45, 536
TspRI	CASTG	2 cut(s)	373, 503
Van91I	CCANNNNNTGG	2 cut(s)	182, 659
VpaK11BI	GGWCC	4 cut(s)	9, 64, 772, 797
XapI	RAATTY	2 cut(s)	140, 1013
XbaI	TCTAGA	1 cut(s)	509
XceI	RCATGY	1 cut(s)	786
XcmI	CCANNNNNNNNNTGG	1 cut(s)	57
XmiI	GTMKAC	1 cut(s)	106
XspI	CTAG	2 cut(s)	398, 510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.