Rmu_sc0000510.1_g000008

Gibberellin receptor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000510.1
Physical Location & Seq
Forward (+)
28006 .. 31603
3598 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000510.1_g000008.1.cds

Sequence Viewer

Length: 2055 bp
atggaggataataatgaagttaatgaagttgaccttactgactccaagatggtagttccattgaacacttgggtcctgatctctaacttcaagctgtcctacaacctcctccgtcgccctgacgggacttttaaccgccacttggcagagttccttgaccggaaagtggcacccaatgcaaatccagttgatggggttctctcatttgatgtcatcattgacaaaggaactagcttactgactcgaatctatcaacctgccagtgctgatgcaccacagccgaacattcttgatttccacaagcctgtgggggttgaggttcttcctgtcataattttcttccatggtggaagctttgctcactcctctgcaaacagtggcatatatgacattctgtgccgcagactagttggcaattgcaaggctgtagtggtctcggtgaactatcgtcgagcacctgaaaaccgattcccatgtgcctatgatgatggatggacagccctgaagtgggtgaactcacggtcctggcttaaaagtacaaaggactcaaaagttcacatatatctggctggtgacagctccggtgggaacattgtacacaatgttgctttgagagcagcagaatctggaattgaggtgttgggaaacatactgctcaacccaatgtttggtgggctagagagaactgaatctgaggagcgcctggatgggaaatactttgtcactatccaagaccgggactggtattggagagcttttctccctgaaggagaagatagggaccatcctgcatgtaatccatttggcccaaggggtataaggcttaaagatgtcaagttcccaaagagccttgtggtggtggctggtttggatcttgttcaggactggcaactagcttatgctaaaggacttgttttgtctgggaccaatggggttaagaaagtacgatcctttgtgggagattcaagtttaaatgcttgctttcgtcttggttggttgggcttatttcgctactgggataataatgaagttaatgaagttgaccttactgactccaagatggtagttccattgaacacttgggtcctgatctctaacttcaagctgtcctacaacctcctccgtcgccctgacgggacttttaaccgccacttggcagagttccttgaccggaaagtggcacccaatgcaaatccagttgatggggttctctcatttgatgtcatcattgacaaaggaactagcttactgactcgaatctatcaacctgccagtgctgatgcaccacagccgaacattcttgatttccacaagcctgtgggggttgaggttcttcctgtcataattttcttccatggtggaagctttgctcactcctctgcaaacagtggcatatatgacattctgtgccgcagactagttggcaattgcaaggctgtagtggtctcggtgaactatcgtcgagcacctgaaaaccgattcccatgtgcctatgatgatggatggacagccctgaagtgggtgaactcacggtcctggcttaaaagtacaaaggactcaaaagttcacatatatctggctggtgacagctccggtgggaacattgtacacaatgttgctttgagagcagcagaatctggaattgaggtgttgggaaacatactgctcaacccaatgtttggtgggctagagagaactgaatctgaggagcgcctggatgggaaatactttgtcactatccaagaccgggactggtattggagagcttttctccctgaaggagaagatagggaccatcctgcatgtaatccatttggcccaaggggtataaggcttaaagatgtcaagttcccaaagagccttgtggtggtggctggtttggatcttgttcaggactggcaactagcttatgctaaaggacttgagaaggctggccaggacgtcaagcttctatttctcgacaaggccacgattggtttctacttgttgccaaacaatgaccacttctacaccgtaatgaatgagataagtagctttgtgaggtctgattgttaa

Protein Analysis

684

Amino Acids

76.59

Weight (kDa)

6.59

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0009868)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1944
Acc36I ACCTGC 2 cut(s) 265, 1276
AccB1I GGYRCC 2 cut(s) 169, 1180
AccB7I CCANNNNNTGG 4 cut(s) 191, 668, 1202, 1679
AciI CCGC 4 cut(s) 136, 400, 1147, 1411
AclWI GGATC 3 cut(s) 879, 942, 1890
AcoI YGGCCR 1 cut(s) 1933
AcuI CTGAAG 4 cut(s) 524, 786, 1535, 1797
AcyI GRCGYC 1 cut(s) 1941
AfaI GTAC 5 cut(s) 538, 597, 945, 1549, 1608
AgsI TTSAA 5 cut(s) 64, 91, 966, 1075, 1102
AhlI ACTAGT 2 cut(s) 406, 1417
AjnI CCWGG 5 cut(s) 524, 702, 1535, 1713, 1935
AloI GAACNNNNNNTCC 4 cut(s) 506, 538, 1517, 1549
Alw21I GWGCWC 2 cut(s) 457, 1468
Alw26I GTCTC 2 cut(s) 439, 1450
AlwI GGATC 3 cut(s) 879, 942, 1890
AlwNI CAGNNNCTG 2 cut(s) 626, 1637
AoxI GGCC 4 cut(s) 805, 1816, 1933, 1965
ApeKI GCWGC 2 cut(s) 617, 1628
AspLEI GCGC 2 cut(s) 702, 1713
AspS9I GGNCC 9 cut(s) 73, 522, 781, 806, 924, 1084, 1533, 1792, 1817
AsuC2I CCSGG 2 cut(s) 737, 1748
AsuHPI GGTGA 6 cut(s) 451, 523, 584, 1462, 1534, 1595
AvaII GGWCC 7 cut(s) 73, 522, 781, 924, 1084, 1533, 1792
BalI TGGCCA 1 cut(s) 1935
BanI GGYRCC 2 cut(s) 169, 1180
Bbv12I GWGCWC 2 cut(s) 457, 1468
BbvI GCAGC 2 cut(s) 629, 1640
BciT130I CCWGG 5 cut(s) 526, 704, 1537, 1715, 1937
BcnI CCSGG 2 cut(s) 737, 1748
BcoDI GTCTC 2 cut(s) 439, 1450
BcuI ACTAGT 2 cut(s) 406, 1417
BfaI CTAG 8 cut(s) 231, 407, 677, 893, 1242, 1418, 1688, 1904
BfmI CTRYAG 2 cut(s) 426, 1437
BfoI RGCGCY 2 cut(s) 703, 1714
BfuAI ACCTGC 2 cut(s) 265, 1276
BisI GCNGC 4 cut(s) 400, 618, 1411, 1629
BlsI GCNGC 4 cut(s) 401, 619, 1412, 1630
Bme1390I CCNGG 7 cut(s) 526, 704, 737, 1537, 1715, 1748, 1937
Bme18I GGWCC 7 cut(s) 73, 522, 781, 924, 1084, 1533, 1792
BmgT120I GGNCC 9 cut(s) 73, 522, 781, 806, 924, 1084, 1533, 1792, 1817
BmiI GGNNCC 7 cut(s) 74, 171, 782, 925, 1085, 1182, 1793
BmrFI CCNGG 7 cut(s) 526, 704, 737, 1537, 1715, 1748, 1937
BmrI ACTGGG 1 cut(s) 1024
BmsI GCATC 2 cut(s) 259, 1270
BmuI ACTGGG 1 cut(s) 1024
BplI GAGNNNNNCTC 4 cut(s) 744, 776, 1755, 1787
BpuEI CTTGAG 1 cut(s) 1943
BpuMI CCSGG 2 cut(s) 737, 1748
BsaHI GRCGYC 1 cut(s) 1941
BsaI GGTCTC 2 cut(s) 439, 1450
BsaJI CCNNGG 4 cut(s) 343, 809, 1354, 1820
BsaWI WCCGGW 4 cut(s) 159, 581, 1170, 1592
Bse1I ACTGG 9 cut(s) 185, 261, 746, 890, 1019, 1196, 1272, 1757, 1901
BseBI CCWGG 5 cut(s) 526, 704, 1537, 1715, 1937
BseDI CCNNGG 4 cut(s) 343, 809, 1354, 1820
BseGI GGATG 6 cut(s) 497, 712, 784, 1508, 1723, 1795
BseMII CTCAG 2 cut(s) 684, 1695
BseNI ACTGG 9 cut(s) 185, 261, 746, 890, 1019, 1196, 1272, 1757, 1901
BseRI GAGGAG 6 cut(s) 98, 355, 710, 1109, 1366, 1721
BseXI GCAGC 2 cut(s) 629, 1640
BshFI GGCC 4 cut(s) 807, 1818, 1935, 1967
BshNI GGYRCC 2 cut(s) 169, 1180
BsiHKAI GWGCWC 2 cut(s) 457, 1468
BsiSI CCGG 6 cut(s) 160, 582, 736, 1171, 1593, 1747
BslFI GGGAC 7 cut(s) 139, 752, 794, 937, 1150, 1763, 1805
BsmAI GTCTC 2 cut(s) 439, 1450
BsmFI GGGAC 7 cut(s) 139, 752, 794, 937, 1150, 1763, 1805
BsnI GGCC 4 cut(s) 807, 1818, 1935, 1967
Bso31I GGTCTC 2 cut(s) 439, 1450
Bsp1286I GDGCHC 2 cut(s) 457, 1468
Bsp1407I TGTACA 2 cut(s) 595, 1606
Bsp143I GATC 5 cut(s) 78, 871, 947, 1089, 1882
Bsp19I CCATGG 2 cut(s) 343, 1354
BspACI CCGC 4 cut(s) 136, 400, 1147, 1411
BspANI GGCC 4 cut(s) 807, 1818, 1935, 1967
BspCNI CTCAG 2 cut(s) 685, 1696
BspLI GGNNCC 7 cut(s) 74, 171, 782, 925, 1085, 1182, 1793
BspMI ACCTGC 2 cut(s) 265, 1276
BspPI GGATC 3 cut(s) 879, 942, 1890
BspT107I GGYRCC 2 cut(s) 169, 1180
BspTNI GGTCTC 2 cut(s) 439, 1450
BsrGI TGTACA 2 cut(s) 595, 1606
BsrI ACTGG 9 cut(s) 185, 261, 746, 890, 1019, 1196, 1272, 1757, 1901
BssECI CCNNGG 4 cut(s) 343, 809, 1354, 1820
BssMI GATC 5 cut(s) 78, 871, 947, 1089, 1882
BssNI GRCGYC 1 cut(s) 1941
BssT1I CCWWGG 4 cut(s) 343, 809, 1354, 1820
Bst2UI CCWGG 5 cut(s) 526, 704, 1537, 1715, 1937
Bst4CI ACNGT 5 cut(s) 377, 522, 1388, 1533, 2014
BstACI GRCGYC 1 cut(s) 1941
BstAPI GCANNNNNTGC 2 cut(s) 176, 1187
BstAUI TGTACA 2 cut(s) 595, 1606
BstC8I GCNNGC 2 cut(s) 979, 1933
BstDEI CTNAG 2 cut(s) 693, 1704
BstDSI CCRYGG 2 cut(s) 343, 1354
BstF5I GGATG 6 cut(s) 497, 712, 784, 1508, 1723, 1795
BstH2I RGCGCY 2 cut(s) 703, 1714
BstHHI GCGC 2 cut(s) 702, 1713
BstKTI GATC 5 cut(s) 81, 874, 950, 1092, 1885
BstMAI GTCTC 2 cut(s) 439, 1450
BstMBI GATC 5 cut(s) 78, 871, 947, 1089, 1882
BstMWI GCNNNNNNNGC 5 cut(s) 176, 614, 1008, 1187, 1625
BstNI CCWGG 5 cut(s) 526, 704, 1537, 1715, 1937
BstNSI RCATGY 2 cut(s) 795, 1806
BstSCI CCNGG 7 cut(s) 524, 702, 735, 1535, 1713, 1746, 1935
BstSFI CTRYAG 2 cut(s) 426, 1437
BstV1I GCAGC 2 cut(s) 629, 1640
BstX2I RGATCY 2 cut(s) 871, 1882
BstYI RGATCY 2 cut(s) 871, 1882
BsuRI GGCC 4 cut(s) 807, 1818, 1935, 1967
BtgI CCRYGG 2 cut(s) 343, 1354
BtsCI GGATG 6 cut(s) 497, 712, 784, 1508, 1723, 1795
BtsIMutI CAGTG 4 cut(s) 268, 382, 1279, 1393
BveI ACCTGC 2 cut(s) 265, 1276
Cac8I GCNNGC 2 cut(s) 979, 1933
CaiI CAGNNNCTG 2 cut(s) 626, 1637
CfoI GCGC 2 cut(s) 702, 1713
Cfr13I GGNCC 9 cut(s) 73, 522, 781, 806, 924, 1084, 1533, 1792, 1817
Csp6I GTAC 5 cut(s) 537, 596, 944, 1548, 1607
CviAII CATG 6 cut(s) 344, 474, 792, 1355, 1485, 1803
CviQI GTAC 5 cut(s) 537, 596, 944, 1548, 1607
DdeI CTNAG 2 cut(s) 693, 1704
DpnI GATC 5 cut(s) 80, 873, 949, 1091, 1884
DpnII GATC 5 cut(s) 78, 871, 947, 1089, 1882
DraI TTTAAA 1 cut(s) 972
EaeI YGGCCR 1 cut(s) 1933
Eco130I CCWWGG 4 cut(s) 343, 809, 1354, 1820
Eco31I GGTCTC 2 cut(s) 439, 1450
Eco47I GGWCC 7 cut(s) 73, 522, 781, 924, 1084, 1533, 1792
Eco57I CTGAAG 4 cut(s) 524, 786, 1535, 1797
EcoO109I RGGNCCY 2 cut(s) 73, 1084
EcoRII CCWGG 5 cut(s) 524, 702, 1535, 1713, 1935
EcoT14I CCWWGG 4 cut(s) 343, 809, 1354, 1820
ErhI CCWWGG 4 cut(s) 343, 809, 1354, 1820
FaeI CATG 6 cut(s) 347, 477, 795, 1358, 1488, 1806
FalI AAGNNNNNCTT 4 cut(s) 18, 50, 1029, 1061
FaqI GGGAC 7 cut(s) 139, 752, 794, 937, 1150, 1763, 1805
FatI CATG 6 cut(s) 343, 473, 791, 1354, 1484, 1802
Fnu4HI GCNGC 4 cut(s) 400, 618, 1411, 1629
FokI GGATG 6 cut(s) 504, 719, 771, 1515, 1730, 1782
Fsp4HI GCNGC 4 cut(s) 400, 618, 1411, 1629
FspBI CTAG 8 cut(s) 231, 407, 677, 893, 1242, 1418, 1688, 1904
GlaI GCGC 2 cut(s) 701, 1712
GluI GCNGC 4 cut(s) 400, 618, 1411, 1629
HaeII RGCGCY 2 cut(s) 703, 1714
HaeIII GGCC 4 cut(s) 807, 1818, 1935, 1967
HapII CCGG 6 cut(s) 160, 582, 736, 1171, 1593, 1747
HhaI GCGC 2 cut(s) 702, 1713
Hin1I GRCGYC 1 cut(s) 1941
Hin1II CATG 6 cut(s) 347, 477, 795, 1358, 1488, 1806
Hin6I GCGC 2 cut(s) 700, 1711
HinP1I GCGC 2 cut(s) 700, 1711
HincII GTYRAC 2 cut(s) 31, 1042
HindII GTYRAC 2 cut(s) 31, 1042
HindIII AAGCTT 3 cut(s) 352, 1363, 1946
HpaII CCGG 6 cut(s) 160, 582, 736, 1171, 1593, 1747
HphI GGTGA 6 cut(s) 451, 523, 584, 1462, 1534, 1595
Hpy188I TCNGA 3 cut(s) 694, 1705, 2047
Hpy188III TCNNGA 9 cut(s) 76, 290, 627, 881, 1087, 1301, 1638, 1892, 1958
Hpy99I CGWCG 4 cut(s) 117, 453, 1128, 1464
HpyAV CCTTC 3 cut(s) 761, 1772, 1921
HpyCH4III ACNGT 5 cut(s) 377, 522, 1388, 1533, 2014
HpyCH4IV ACGT 1 cut(s) 1941
HpyF10VI GCNNNNNNNGC 5 cut(s) 176, 614, 1008, 1187, 1625
HpyF3I CTNAG 2 cut(s) 693, 1704
HpySE526I ACGT 1 cut(s) 1941
Hsp92I GRCGYC 1 cut(s) 1941
Hsp92II CATG 6 cut(s) 347, 477, 795, 1358, 1488, 1806
HspAI GCGC 2 cut(s) 700, 1711
Kzo9I GATC 5 cut(s) 78, 871, 947, 1089, 1882
LmnI GCTCC 4 cut(s) 584, 697, 1595, 1708
Lsp1109I GCAGC 2 cut(s) 629, 1640
LweI GCATC 2 cut(s) 259, 1270
MaeI CTAG 8 cut(s) 231, 407, 677, 893, 1242, 1418, 1688, 1904
MaeII ACGT 1 cut(s) 1941
MaeIII GTNAC 4 cut(s) 572, 721, 1583, 1732
MalI GATC 5 cut(s) 80, 873, 949, 1091, 1884
MboI GATC 5 cut(s) 78, 871, 947, 1089, 1882
MboII GAAGA 6 cut(s) 314, 331, 785, 1325, 1342, 1796
MfeI CAATTG 2 cut(s) 415, 1426
MflI RGATCY 2 cut(s) 871, 1882
MhlI GDGCHC 2 cut(s) 457, 1468
MlsI TGGCCA 1 cut(s) 1935
MluCI AATT 6 cut(s) 333, 415, 630, 1344, 1426, 1641
MluNI TGGCCA 1 cut(s) 1935
MlyI GAGTC 6 cut(s) 35, 235, 539, 1046, 1246, 1550
Mox20I TGGCCA 1 cut(s) 1935
MscI TGGCCA 1 cut(s) 1935
MslI CAYNNNNRTG 1 cut(s) 2015
Msp20I TGGCCA 1 cut(s) 1935
MspI CCGG 6 cut(s) 160, 582, 736, 1171, 1593, 1747
MspR9I CCNGG 7 cut(s) 526, 704, 737, 1537, 1715, 1748, 1937
MunI CAATTG 2 cut(s) 415, 1426
MvaI CCWGG 5 cut(s) 526, 704, 1537, 1715, 1937
MwoI GCNNNNNNNGC 5 cut(s) 176, 614, 1008, 1187, 1625
NciI CCSGG 2 cut(s) 737, 1748
NcoI CCATGG 2 cut(s) 343, 1354
NdeII GATC 5 cut(s) 78, 871, 947, 1089, 1882
NlaIII CATG 6 cut(s) 347, 477, 795, 1358, 1488, 1806
NlaIV GGNNCC 7 cut(s) 74, 171, 782, 925, 1085, 1182, 1793
NmuCI GTSAC 4 cut(s) 572, 721, 1583, 1732
NspI RCATGY 2 cut(s) 795, 1806
PfeI GAWTC 9 cut(s) 246, 468, 623, 689, 962, 1257, 1479, 1634, 1700
PflMI CCANNNNNTGG 4 cut(s) 191, 668, 1202, 1679
PkrI GCNGC 4 cut(s) 401, 619, 1412, 1630
PleI GAGTC 6 cut(s) 35, 235, 539, 1046, 1246, 1550
PpsI GAGTC 6 cut(s) 35, 235, 539, 1046, 1246, 1550
PpuMI RGGWCCY 2 cut(s) 73, 1084
Psp5II RGGWCCY 2 cut(s) 73, 1084
Psp6I CCWGG 5 cut(s) 524, 702, 1535, 1713, 1935
PspGI CCWGG 5 cut(s) 524, 702, 1535, 1713, 1935
PspN4I GGNNCC 7 cut(s) 74, 171, 782, 925, 1085, 1182, 1793
PspPI GGNCC 9 cut(s) 73, 522, 781, 806, 924, 1084, 1533, 1792, 1817
PspPPI RGGWCCY 2 cut(s) 73, 1084
PstNI CAGNNNCTG 2 cut(s) 626, 1637
PsuI RGATCY 2 cut(s) 871, 1882
RsaI GTAC 5 cut(s) 538, 597, 945, 1549, 1608
RsaNI GTAC 5 cut(s) 537, 596, 944, 1548, 1607
RseI CAYNNNNRTG 1 cut(s) 2015
SatI GCNGC 4 cut(s) 400, 618, 1411, 1629
Sau3AI GATC 5 cut(s) 78, 871, 947, 1089, 1882
Sau96I GGNCC 9 cut(s) 73, 522, 781, 806, 924, 1084, 1533, 1792, 1817
SchI GAGTC 6 cut(s) 35, 235, 539, 1046, 1246, 1550
ScrFI CCNGG 7 cut(s) 526, 704, 737, 1537, 1715, 1748, 1937
SduI GDGCHC 2 cut(s) 457, 1468
SfaNI GCATC 2 cut(s) 259, 1270
SfcI CTRYAG 2 cut(s) 426, 1437
SinI GGWCC 7 cut(s) 73, 522, 781, 924, 1084, 1533, 1792
SmiMI CAYNNNNRTG 1 cut(s) 2015
SmlI CTYRAG 1 cut(s) 1922
SmoI CTYRAG 1 cut(s) 1922
SpeI ACTAGT 2 cut(s) 406, 1417
Sse9I AATT 6 cut(s) 333, 415, 630, 1344, 1426, 1641
SsiI CCGC 4 cut(s) 136, 400, 1147, 1411
SspMI CTAG 8 cut(s) 231, 407, 677, 893, 1242, 1418, 1688, 1904
StyD4I CCNGG 7 cut(s) 524, 702, 735, 1535, 1713, 1746, 1935
StyI CCWWGG 4 cut(s) 343, 809, 1354, 1820
TaaI ACNGT 5 cut(s) 377, 522, 1388, 1533, 2014
TaiI ACGT 1 cut(s) 1944
TaqI TCGA 5 cut(s) 244, 451, 1255, 1462, 1959
TasI AATT 6 cut(s) 333, 415, 630, 1344, 1426, 1641
TatI WGTACW 4 cut(s) 536, 595, 1547, 1606
TauI GCSGC 2 cut(s) 402, 1413
TfiI GAWTC 9 cut(s) 246, 468, 623, 689, 962, 1257, 1479, 1634, 1700
TscAI CASTG 4 cut(s) 268, 382, 1279, 1393
TseFI GTSAC 4 cut(s) 572, 721, 1583, 1732
TseI GCWGC 2 cut(s) 617, 1628
Tsp45I GTSAC 4 cut(s) 572, 721, 1583, 1732
TspDTI ATGAA 5 cut(s) 30, 39, 1041, 1050, 2033
TspGWI ACGGA 2 cut(s) 101, 1112
TspRI CASTG 4 cut(s) 268, 382, 1279, 1393
Van91I CCANNNNNTGG 4 cut(s) 191, 668, 1202, 1679
VpaK11BI GGWCC 7 cut(s) 73, 522, 781, 924, 1084, 1533, 1792
XceI RCATGY 2 cut(s) 795, 1806
XcmI CCANNNNNNNNNTGG 2 cut(s) 66, 1077
XspI CTAG 8 cut(s) 231, 407, 677, 893, 1242, 1418, 1688, 1904
ZraI GACGTC 1 cut(s) 1942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.