Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006568

Physical Location & Seq

Genomic Coordinates Forward (+)

28981346 .. 28985414

Gene Structure 4069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G333100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGGAGGTACAGTGGATTCTGTTGTGCCATGGCTTAGTGACACTGCTTGTTCTAGTCTCCTTCCTCTGTGGCCAATGGCCCATCTTCGAAGGCACGCCCATCCAACGCATCAACCACTTTCTCACCTTCGGCGCCTACGATTACTTTCAACGATTTGTTGGGTTTGTTTTTGGGGCCAAGGGAACTAATGCCATTTCCTCCGTGGAGTATTTCTGCTGTGATCGACCCAATCCAATTTTGCAGATAATATATCTTGCAATTGTAGGAGGAACGTATTTCTTAGTTGCAAATTCTTCCTTCGGTTACATTCCTGGCTATTATATAGGTGAAATTCACAGGTATACAAGCTTGTTGGCTGTTGGCGTCGGTGTTCTGCTCTTTCTATTAACTTGCTTTTCTGATCCAGGAACAGTGAAGGCTGATAATGTTTCTCTGTATCTCTCTGCTTATCCCTATGACAATATTATATACTCTGAGAAAGAATGTTCAACATGCAAAATTCCAAAACCTGCTAGGTCTAAGCATTGCAGCATATGTGATCGCTGTGTTGCCCGCTTTGACCATCATTGTGGATGGATGAATAATTGCATAGGTGAGAGAAATACCCAGTACTTCATGGCGTTTCTTTTGTGGCACACCTTACTTTGCATATATGGAACAGTGGCCATTGGGTTAATTCTTGCTGGACAAATTAAAGAATTTAAAGTTATTGATATCCTAACTGTTTATTATGGTATAGAAAATTCTTTTCGCAGTTTATCACCGCATGTTGTGCAGTGGTTGTTGGGGGCCTACAACACTCAAATACTTCTTATGGTGTTTCTTGCAATAGTTTCACTGTCATTGGCGGGTTTCTTTGGTTACCATGCAAAACTTTGTCTGACAAATACTACGACAAACGAGACTTTCAAGTGGCAAGAGTATGTAAACTGGCAGAGGAAGCTAAATGAAGCAAGGGCGAGTTCTGCAGCACTAAAAGCAAGTATCAGTGGGATGAGTAGTGAAAGAAAACCTCCAGAGAACAAATGGAGAGCCATCTTCCGAAGATCCCCACTTAAAGATGTTGAGGTTGTGGTTACGAATAACATATATGACAAAGGATTCTTTCAGAATATTCTTGAGATCATCATGCCCCTCTCAAGAAGACAGTTGTCTCTGCGAACCAAATCGAAGTCTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DHHC

Protein Analysis

394

Amino Acids

44.59

Weight (kDa)

8.9

Isoelectric Point (pI)

34.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04970 AT3G04970 AT3G04970
fragaria_vesca	FvH4_6g04920 FvH4_6g04920 FvH4_6g04920 FvH4_6g04920 FvH4_6g04920 FvH4_6g04920
malus_domestica	MD04G1213200.v1.1 MD12G1227400.v1.1
prunus_persica	Prupe.6G333100_v2.0.a1
pyrus_communis	pycom04g18880 pycom12g21220
rosa_chinensis	RchiOBHm_Chr3g0453421
rosa_laevigata	RLG00000025516
rosa_multiflora	Rmu_sc0000510.1_g000004 Rmu_sc0010297.1_g000001
rosa_roxburghii	Rroxscaffold_6G00430390
rosa_rugosa	Rorug02G0648800 Rorug02G0648800
rosa_samantha	Rh3AG051700 Rh3BG053100 Rh3CG052400 Rh3DG053200
rosa_wichuraiana	Rw3G003970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	517
AccB1I	GGYRCC	1 cut(s)	131
AccI	GTMKAC	1 cut(s)	341
AciI	CCGC	3 cut(s)	553, 764, 848
AclWI	GGATC	2 cut(s)	395, 1041
AcoI	YGGCCR	2 cut(s)	70, 663
AcsI	RAATTY	5 cut(s)	289, 330, 498, 698, 742
AcyI	GRCGYC	2 cut(s)	132, 363
AfaI	GTAC	2 cut(s)	9, 611
AgsI	TTSAA	3 cut(s)	149, 489, 910
AjnI	CCWGG	2 cut(s)	310, 403
AluBI	AGCT	2 cut(s)	348, 943
AluI	AGCT	2 cut(s)	348, 943
Alw26I	GTCTC	3 cut(s)	61, 896, 1158
AlwI	GGATC	2 cut(s)	395, 1041
AoxI	GGCC	5 cut(s)	70, 77, 174, 663, 789
ApeKI	GCWGC	2 cut(s)	528, 968
ApoI	RAATTY	5 cut(s)	289, 330, 498, 698, 742
AspLEI	GCGC	1 cut(s)	134
AspS9I	GGNCC	3 cut(s)	78, 174, 789
AsuHPI	GGTGA	4 cut(s)	115, 338, 605, 753
AsuII	TTCGAA	1 cut(s)	87
BalI	TGGCCA	2 cut(s)	72, 665
BanI	GGYRCC	1 cut(s)	131
BbsI	GAAGAC	1 cut(s)	1150
BbvI	GCAGC	2 cut(s)	540, 980
BccI	CCATC	5 cut(s)	89, 107, 567, 570, 1043
BciT130I	CCWGG	2 cut(s)	312, 405
BcoDI	GTCTC	3 cut(s)	61, 896, 1158
BfaI	CTAG	2 cut(s)	53, 513
BfmI	CTRYAG	1 cut(s)	966
BfoI	RGCGCY	1 cut(s)	135
BfuAI	ACCTGC	1 cut(s)	517
BisI	GCNGC	2 cut(s)	529, 969
BlsI	GCNGC	2 cut(s)	530, 970
BmcAI	AGTACT	1 cut(s)	611
Bme1390I	CCNGG	2 cut(s)	312, 405
BmgT120I	GGNCC	3 cut(s)	78, 174, 789
BmiI	GGNNCC	3 cut(s)	133, 175, 790
BmrFI	CCNGG	2 cut(s)	312, 405
BmrI	ACTGGG	1 cut(s)	601
BmsI	GCATC	1 cut(s)	117
BmuI	ACTGGG	1 cut(s)	601
BoxI	GACNNNNGTC	1 cut(s)	1150
BpiI	GAAGAC	1 cut(s)	1150
BpmI	CTGGAG	1 cut(s)	999
Bpu14I	TTCGAA	1 cut(s)	87
BpuEI	CTTGAG	2 cut(s)	1123, 1139
BsaHI	GRCGYC	2 cut(s)	132, 363
BsaJI	CCNNGG	3 cut(s)	28, 177, 201
BsaXI	ACNNNNNCTCC	1 cut(s)	26
Bse1I	ACTGG	2 cut(s)	607, 935
Bse3DI	GCAATG	1 cut(s)	523
BseBI	CCWGG	2 cut(s)	312, 405
BseDI	CCNNGG	3 cut(s)	28, 177, 201
BseGI	GGATG	4 cut(s)	99, 578, 582, 999
BseMI	GCAATG	1 cut(s)	523
BseMII	CTCAG	1 cut(s)	465
BseNI	ACTGG	2 cut(s)	607, 935
BseXI	GCAGC	2 cut(s)	540, 980
BsgI	GTGCAG	1 cut(s)	794
BshFI	GGCC	5 cut(s)	72, 79, 176, 665, 791
BshNI	GGYRCC	1 cut(s)	131
BsmAI	GTCTC	3 cut(s)	61, 896, 1158
BsnI	GGCC	5 cut(s)	72, 79, 176, 665, 791
Bsp119I	TTCGAA	1 cut(s)	87
Bsp143I	GATC	5 cut(s)	220, 400, 538, 1046, 1122
Bsp19I	CCATGG	1 cut(s)	28
BspACI	CCGC	3 cut(s)	553, 764, 848
BspANI	GGCC	5 cut(s)	72, 79, 176, 665, 791
BspCNI	CTCAG	1 cut(s)	466
BspLI	GGNNCC	3 cut(s)	133, 175, 790
BspMAI	CTGCAG	1 cut(s)	970
BspMI	ACCTGC	1 cut(s)	517
BspPI	GGATC	2 cut(s)	395, 1041
BspT104I	TTCGAA	1 cut(s)	87
BspT107I	GGYRCC	1 cut(s)	131
BsrDI	GCAATG	1 cut(s)	523
BsrI	ACTGG	2 cut(s)	607, 935
BssECI	CCNNGG	3 cut(s)	28, 177, 201
BssMI	GATC	5 cut(s)	220, 400, 538, 1046, 1122
BssNAI	GTATAC	1 cut(s)	342
BssNI	GRCGYC	2 cut(s)	132, 363
BssT1I	CCWWGG	2 cut(s)	28, 177
Bst1107I	GTATAC	1 cut(s)	342
Bst2UI	CCWGG	2 cut(s)	312, 405
Bst4CI	ACNGT	6 cut(s)	12, 412, 661, 724, 840, 1149
BstACI	GRCGYC	2 cut(s)	132, 363
BstAPI	GCANNNNNTGC	1 cut(s)	772
BstBI	TTCGAA	1 cut(s)	87
BstC8I	GCNNGC	2 cut(s)	95, 553
BstDEI	CTNAG	4 cut(s)	34, 280, 474, 519
BstDSI	CCRYGG	2 cut(s)	28, 201
BstEII	GGTNACC	1 cut(s)	860
BstF5I	GGATG	4 cut(s)	99, 578, 582, 999
BstH2I	RGCGCY	1 cut(s)	135
BstHHI	GCGC	1 cut(s)	134
BstKTI	GATC	5 cut(s)	223, 403, 541, 1049, 1125
BstMAI	GTCTC	3 cut(s)	61, 896, 1158
BstMBI	GATC	5 cut(s)	220, 400, 538, 1046, 1122
BstMWI	GCNNNNNNNGC	4 cut(s)	772, 940, 965, 977
BstNI	CCWGG	2 cut(s)	312, 405
BstNSI	RCATGY	2 cut(s)	495, 770
BstPAI	GACNNNNGTC	1 cut(s)	1150
BstPI	GGTNACC	1 cut(s)	860
BstSCI	CCNGG	2 cut(s)	310, 403
BstSFI	CTRYAG	1 cut(s)	966
BstV1I	GCAGC	2 cut(s)	540, 980
BstV2I	GAAGAC	1 cut(s)	1150
BstX2I	RGATCY	1 cut(s)	1046
BstXI	CCANNNNNNTGG	1 cut(s)	569
BstYI	RGATCY	1 cut(s)	1046
BstZ17I	GTATAC	1 cut(s)	342
BsuRI	GGCC	5 cut(s)	72, 79, 176, 665, 791
BtgI	CCRYGG	2 cut(s)	28, 201
BtsCI	GGATG	4 cut(s)	99, 578, 582, 999
BtsI	GCAGTG	2 cut(s)	41, 782
BtsIMutI	CAGTG	7 cut(s)	17, 41, 417, 666, 782, 836, 994
BveI	ACCTGC	1 cut(s)	517
Cac8I	GCNNGC	2 cut(s)	95, 553
CfoI	GCGC	1 cut(s)	134
Cfr13I	GGNCC	3 cut(s)	78, 174, 789
CseI	GACGC	1 cut(s)	352
Csp6I	GTAC	2 cut(s)	8, 610
CviAII	CATG	6 cut(s)	29, 492, 616, 767, 866, 1129
CviQI	GTAC	2 cut(s)	8, 610
DdeI	CTNAG	4 cut(s)	34, 280, 474, 519
DinI	GGCGCC	1 cut(s)	133
DpnI	GATC	5 cut(s)	222, 402, 540, 1048, 1124
DpnII	GATC	5 cut(s)	220, 400, 538, 1046, 1122
DraI	TTTAAA	1 cut(s)	703
EaeI	YGGCCR	2 cut(s)	70, 663
Eco130I	CCWWGG	2 cut(s)	28, 177
Eco32I	GATATC	1 cut(s)	715
Eco91I	GGTNACC	1 cut(s)	860
EcoO109I	RGGNCCY	1 cut(s)	789
EcoO65I	GGTNACC	1 cut(s)	860
EcoRII	CCWGG	2 cut(s)	310, 403
EcoRV	GATATC	1 cut(s)	715
EcoT14I	CCWWGG	2 cut(s)	28, 177
EgeI	GGCGCC	1 cut(s)	133
EheI	GGCGCC	1 cut(s)	133
ErhI	CCWWGG	2 cut(s)	28, 177
FaeI	CATG	6 cut(s)	32, 495, 619, 770, 869, 1132
FatI	CATG	6 cut(s)	28, 491, 615, 766, 865, 1128
FauI	CCCGC	2 cut(s)	560, 841
FauNDI	CATATG	1 cut(s)	533
FblI	GTMKAC	1 cut(s)	341
Fnu4HI	GCNGC	2 cut(s)	529, 969
FokI	GGATG	4 cut(s)	86, 585, 589, 1006
Fsp4HI	GCNGC	2 cut(s)	529, 969
FspBI	CTAG	2 cut(s)	53, 513
GlaI	GCGC	1 cut(s)	133
GluI	GCNGC	2 cut(s)	529, 969
GsuI	CTGGAG	1 cut(s)	999
HaeII	RGCGCY	1 cut(s)	135
HaeIII	GGCC	5 cut(s)	72, 79, 176, 665, 791
HgaI	GACGC	1 cut(s)	352
HhaI	GCGC	1 cut(s)	134
Hin1I	GRCGYC	2 cut(s)	132, 363
Hin1II	CATG	6 cut(s)	32, 495, 619, 770, 869, 1132
Hin6I	GCGC	1 cut(s)	132
HinP1I	GCGC	1 cut(s)	132
HindIII	AAGCTT	1 cut(s)	346
HinfI	GANTC	2 cut(s)	16, 1101
HphI	GGTGA	4 cut(s)	115, 338, 605, 753
Hpy166II	GTNNAC	2 cut(s)	342, 928
Hpy188I	TCNGA	5 cut(s)	400, 475, 882, 1043, 1110
Hpy188III	TCNNGA	3 cut(s)	1016, 1118, 1140
Hpy8I	GTNNAC	2 cut(s)	342, 928
Hpy99I	CGWCG	1 cut(s)	368
HpyAV	CCTTC	5 cut(s)	70, 83, 136, 307, 409
HpyCH4III	ACNGT	6 cut(s)	12, 412, 661, 724, 840, 1149
HpyCH4IV	ACGT	1 cut(s)	272
HpyF10VI	GCNNNNNNNGC	4 cut(s)	772, 940, 965, 977
HpyF3I	CTNAG	4 cut(s)	34, 280, 474, 519
HpySE526I	ACGT	1 cut(s)	272
Hsp92I	GRCGYC	2 cut(s)	132, 363
Hsp92II	CATG	6 cut(s)	32, 495, 619, 770, 869, 1132
HspAI	GCGC	1 cut(s)	132
KasI	GGCGCC	1 cut(s)	131
Kzo9I	GATC	5 cut(s)	220, 400, 538, 1046, 1122
Lsp1109I	GCAGC	2 cut(s)	540, 980
LweI	GCATC	1 cut(s)	117
MaeI	CTAG	2 cut(s)	53, 513
MaeII	ACGT	1 cut(s)	272
MaeIII	GTNAC	4 cut(s)	37, 302, 860, 1075
MalI	GATC	5 cut(s)	222, 402, 540, 1048, 1124
MboI	GATC	5 cut(s)	220, 400, 538, 1046, 1122
MboII	GAAGA	5 cut(s)	76, 285, 1030, 1056, 1155
MfeI	CAATTG	1 cut(s)	258
MflI	RGATCY	1 cut(s)	1046
MlsI	TGGCCA	2 cut(s)	72, 665
MluNI	TGGCCA	2 cut(s)	72, 665
Mly113I	GGCGCC	1 cut(s)	132
MmeI	TCCRAC	1 cut(s)	127
MnlI	CCTC	7 cut(s)	74, 208, 260, 930, 1023, 1060, 1145
Mox20I	TGGCCA	2 cut(s)	72, 665
MscI	TGGCCA	2 cut(s)	72, 665
MseI	TTAA	5 cut(s)	386, 674, 693, 702, 1056
MslI	CAYNNNNRTG	1 cut(s)	567
Msp20I	TGGCCA	2 cut(s)	72, 665
MspR9I	CCNGG	2 cut(s)	312, 405
MunI	CAATTG	1 cut(s)	258
MvaI	CCWGG	2 cut(s)	312, 405
MwoI	GCNNNNNNNGC	4 cut(s)	772, 940, 965, 977
NarI	GGCGCC	1 cut(s)	132
NcoI	CCATGG	1 cut(s)	28
NdeI	CATATG	1 cut(s)	533
NdeII	GATC	5 cut(s)	220, 400, 538, 1046, 1122
NlaIII	CATG	6 cut(s)	32, 495, 619, 770, 869, 1132
NlaIV	GGNNCC	3 cut(s)	133, 175, 790
NmuCI	GTSAC	1 cut(s)	37
NspI	RCATGY	2 cut(s)	495, 770
NspV	TTCGAA	1 cut(s)	87
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PfeI	GAWTC	2 cut(s)	16, 1101
PfoI	TCCNGGA	1 cut(s)	403
PkrI	GCNGC	2 cut(s)	530, 970
PluTI	GGCGCC	1 cut(s)	135
PshAI	GACNNNNGTC	1 cut(s)	1150
Psp6I	CCWGG	2 cut(s)	310, 403
PspEI	GGTNACC	1 cut(s)	860
PspGI	CCWGG	2 cut(s)	310, 403
PspN4I	GGNNCC	3 cut(s)	133, 175, 790
PspPI	GGNCC	3 cut(s)	78, 174, 789
PstI	CTGCAG	1 cut(s)	970
PsuI	RGATCY	1 cut(s)	1046
RsaI	GTAC	2 cut(s)	9, 611
RsaNI	GTAC	2 cut(s)	8, 610
RseI	CAYNNNNRTG	1 cut(s)	567
SaqAI	TTAA	5 cut(s)	386, 674, 693, 702, 1056
SatI	GCNGC	2 cut(s)	529, 969
Sau3AI	GATC	5 cut(s)	220, 400, 538, 1046, 1122
Sau96I	GGNCC	3 cut(s)	78, 174, 789
ScaI	AGTACT	1 cut(s)	611
ScrFI	CCNGG	2 cut(s)	312, 405
SfaNI	GCATC	1 cut(s)	117
SfcI	CTRYAG	1 cut(s)	966
SfoI	GGCGCC	1 cut(s)	133
SfuI	TTCGAA	1 cut(s)	87
SmiMI	CAYNNNNRTG	1 cut(s)	567
SmlI	CTYRAG	2 cut(s)	1118, 1138
SmoI	CTYRAG	2 cut(s)	1118, 1138
SsiI	CCGC	3 cut(s)	553, 764, 848
SspDI	GGCGCC	1 cut(s)	131
SspI	AATATT	2 cut(s)	463, 1114
SspMI	CTAG	2 cut(s)	53, 513
StyD4I	CCNGG	2 cut(s)	310, 403
StyI	CCWWGG	2 cut(s)	28, 177
TaaI	ACNGT	6 cut(s)	12, 412, 661, 724, 840, 1149
TaiI	ACGT	1 cut(s)	275
TaqI	TCGA	3 cut(s)	87, 223, 1169
TatI	WGTACW	1 cut(s)	609
TfiI	GAWTC	2 cut(s)	16, 1101
Tru1I	TTAA	5 cut(s)	386, 674, 693, 702, 1056
Tru9I	TTAA	5 cut(s)	386, 674, 693, 702, 1056
TscAI	CASTG	7 cut(s)	17, 48, 417, 666, 782, 843, 994
TseFI	GTSAC	1 cut(s)	37
TseI	GCWGC	2 cut(s)	528, 968
Tsp45I	GTSAC	1 cut(s)	37
TspDTI	ATGAA	3 cut(s)	593, 604, 963
TspGWI	ACGGA	1 cut(s)	190
TspRI	CASTG	7 cut(s)	17, 48, 417, 666, 782, 843, 994
XapI	RAATTY	5 cut(s)	289, 330, 498, 698, 742
XceI	RCATGY	2 cut(s)	495, 770
XcmI	CCANNNNNNNNNTGG	2 cut(s)	199, 1023
XmiI	GTMKAC	1 cut(s)	341
XspI	CTAG	2 cut(s)	53, 513
ZrmI	AGTACT	1 cut(s)	611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.