Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0005460

Physical Location & Seq

Genomic Coordinates Reverse (-)

30261627 .. 30272325

Gene Structure 10699 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G356900.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3108 bp

ATGAACCAGAGCCACTCAAGCAACAACAGCAGCAACAGCAACATCCATGGTTCTAATAAGAAAATGGTAGTCATGGACGCCCAGCCTTCCCGACCCGGAAGGTCCCACAGCCGATCCAATTCCATATCCGACCCGAATACCAGCCAGAGCCTCGCCTCCATCCTCAACAACCCCAATGCCTCCGACTCCTCCTCCTGGGTCGGCTGGTGGTCCTCCTCCGCCTCCGTCGCCCCGCCCGAATTCGCGCCCCTCATACCCAAATCGGCATCCGACTCCGTGACCCGATCCGACTTCCAGCCTTACCTCGCCTCCATTTCCGATCACTACAACCGCTTCGAGGACATCATCAACCACGTCAAGAAGGAGAACTCGGACATCGACTCCATCGGCGGCCAAGGCGAAGCCCTCGTCGCCTGCCTCCGAGAAGTCCCCGCTCTCTATTTCAAAGAAGACTTTGCCCTGGAAGACGGTGCCACATTTCGATCGGCCTGCCCGTTCACGAACGTCTCCGAGAATCTGGTGCTCCAGGAGAAGCTCTCGCATTACTTGGACGTCGTGGAGCTTCACTTGGTGAAAGAGATCTCGCTGCGTTCCAACTCCTTCTTCGAGGCTCAGGGGCAGTTGCAGGACTTGAATGTGAAGATCGTCGAAGGATGTAGTCGGATTCGCGAGCTCAAGGAGACCATTCTGCTCTTGGATGTCGATTTGGTCGAGTGCGCCAGGCAGATTCATGATTTGAATGAAACCAGGAGTAATTTGTTGGCTCTTCAACAGAAATTGAGGCTCATTCTTTATGTCAATCAAGCTCTTTCTGCGCTTAAACTGCTTGTTGCCTCTGCAGATTGTGCTGGAGCTTTGGATGTCACAGATGATTTGCAGCAATTGCTGGATGGGGATGAGCTTACTGGTCTACATTGCTTTCATCACCTCAGGGATCGTGTAGCAGCTTCAATTGAATCCATAAACAGCATTCTTTCTGCAGAGTTTATGCGTGCTTCAATACACGATGCTGGAGATACAGATGTTATAATTATATCCAGAGCGCAAGCAAGGGCATCAATTCTCATGAATGGAGAAGATGGTGAAATTAAGTTGGACGATGAAGAAACCTCCAATTATCAAGATCGTCTTCTTCCTGTCATCATTGGATTGCTTAGAACAGCCAAGCTCCCTTCTGTGTTGAGGTTATATCGTGACCAGCTTACAGCTGACATGAAGACTGCTATTAAAAATGCAGTTGCAGAGCTGCTTCCTGTTCTTGTTTCCCGACCCATGGAGTCAGACTTTACACCTGGAGAGCGAATAGTAGATGCAGATGGTATTGGTGCATCACTTGCAAGCAAGTTGAGGAGCCTGTCATCTGAAAGCTTTGTTCAACTTTTAAGTGCTATTTTCCTGATTGTAAGGGCACATCTAGTGCGGGCTGCTGAAGTGAAGAAGGCCATCGAGTGGATTATGTGCAACCTTGATGGTCACTATGCAGCAGATTCAGTTGCTGCTGCAATCGCGATTGGTGCTGCAGCTGCAGAAACAGCTCAAGAAAGTGATAGTCAAGGTGGTTTGCTTCCCTCGTATTCACCTCAGAGAGTTTCCGCCAAGGCCCTTCCATTTCAAGGGAAAGCAAATGATGCAGCAAGTCCTTCAAACATGTCTAAGAATTTTAGAGCTGATGTGTTACGAGAAAACACAGAAGCTGTTGTTGCAGCATGTGATGCTGCCCATGGAAGATGGGCAAAGCTACTTGGGGTTCGTGCTCTTCTTCATCCTAAGTTGAGATTGCAGGAGTTTTTGAGCATCTTTAACATCACCCAAGAGTTTATAACTGCTACAGAGAAGATAGGGGGAAGGCCAGGATTTAGCATCAGGGGAACCCTACAGTCACAAGCCAAAGCCTTCATCGAATTTCAGCATGAATCTCGATTGGCAAAAATTAAGGCCGTTCTTGACCAAGAAACATGGGTTGAAGTAGATGTTCCTGATGAATTTCAAGTCATTGTCACTTCACTATTTTGTTCTGAATCGTTGGTATCTGAGAACCTGGATGCTATCGAAGGTAATATGGAAACAAGCTATAGGGAGATGGCCACAAGCAGTAATAATTCACATACAGAGAATACAGCACCATCAATTGCCGAACAGCAAATTAAACGGGCTGATTCGAGTGACTTATCCGCGGATGTGACTGCGAAAGAGAAGTCTACACAAAATGCTGATGGAGTGGAAAAAAATAAGGCTGATGTCGCAAATTCTGTGGCTCAAAATAACCACAGCAACATGAAGGAGCGGGGAAAATCAACCTCTCAAACCCTTTTCTTCAAAGGTGTTGGTTTTCACATGGTAAACTGTGGCTTGATATTGATGAAGATGTTGTCAGAGTACATTGATATGAACAATTTTTTTCCAGCTCTGTCCTCAGAAGTTGTTCATCGTATTGTAGAAATTTTAAAGTTTTTCAATACAAGAACGTGCCAACTTGTTCTTGGTGCTGGTGCCATGCAGGTATCTGGTTTAAAGTCCATCACTTCTAAACACTTGGCCTTGGCAAGTCAAGTCATCAGTTTTACGTATGCTATTATTCCTGAAATCAGGCAAATTCTTTTTCTAAAAGTACCTGAGACAAGAAAGGCACTGTTGCTATCTGAAATTGATCGAGTAGCTCAGGATTACAAGGTTCACAGAGATGAAATACATACGAAGCTGGTTCAGATCATGAGAGAAAGGTTATTAGTTCATCTACGTGGGTTACCTCAAATTGTAGAGAGCTGGAATAGACCTGAAGAAGCTGACCCACAGCCCAGCCAGTTTGCTCGATCCCTTACTAAGGAAGTTGGATACTTGCAACGTGTCCTAACTCGAACTTTACATGAGGTCGATGTTCAAGCAATTTTCAGGCAAGTGGTTATAGTCTTCCATTCACAAATTTCAGAAGCATTTTCACGCTTAGAGATCAGCACACCACAGGCCAAGGACAGGCTGTATCGGGATGTCAAACACATTCTTGGATGCATTCGCTCCTTGCCTTCTGATAAAATGAGTGAATATAGTATTCCAAACTGGGGTCAACTAGATGAATTTGTGGTTCAGAGATTTGGGGCAGAAGCTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000149 GO:0000938 GO:0001894 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005794 GO:0005802 GO:0006810 GO:0006892 GO:0006896 GO:0006996 GO:0007010 GO:0007034 GO:0007041 GO:0008150 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0016482 GO:0019905 GO:0031090 GO:0031410 GO:0031974 GO:0031981 GO:0031982 GO:0031984 GO:0032501 GO:0032588 GO:0032991 GO:0040008 GO:0042147 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045103 GO:0045104 GO:0046907 GO:0048193 GO:0048471 GO:0048871 GO:0048872 GO:0048873 GO:0050789 GO:0050879 GO:0050881 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060052 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps54

Protein Analysis

1036

Amino Acids

114.39

Weight (kDa)

5.68

Isoelectric Point (pI)

44.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19490 AT4G19490
fragaria_vesca	FvH4_6g01010 FvH4_6g01010 FvH4_6g01010
malus_domestica	MD04G1237800.v1.1 MD12G1256000.v1.1
prunus_persica	Prupe.6G356900_v2.0.a1 Prupe.6G356900_v2.0.a1 Prupe.6G356900_v2.0.a1 Prupe.6G356900_v2.0.a1
pyrus_communis	pycom04g21100 pycom12g23480
rosa_chinensis	RchiOBHm_Chr3g0448451
rosa_laevigata	RLG00000000687 RLG00000025905
rosa_multiflora	Rmu_sc0003308.1_g000012 Rmu_sc0011979.1_g000005
rosa_roxburghii	Rroxscaffold_6G00426680
rosa_rugosa	Rorug02G0612500 Rorug02G0612600 Rorug02G0612600 Rorug07G0334800
rosa_samantha	Rh3AG012000 Rh3BG011800 Rh3CG011500 Rh3DG012200 Rh7BG461900
rosa_wichuraiana	Rw3G000930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1028, 1820
AatII	GACGTC	1 cut(s)	555
Acc36I	ACCTGC	1 cut(s)	2488
AccB1I	GGYRCC	2 cut(s)	470, 2489
AccB7I	CCANNNNNTGG	1 cut(s)	1449
AccBSI	CCGCTC	2 cut(s)	434, 2284
AccI	GTMKAC	2 cut(s)	910, 2198
AccII	CGCG	4 cut(s)	245, 669, 1508, 2174
AclWI	GGATC	4 cut(s)	108, 279, 942, 2805
AcoI	YGGCCR	2 cut(s)	391, 2082
AcsI	RAATTY	9 cut(s)	239, 1657, 1901, 1982, 2245, 2439, 2592, 2919, 3071
AcuI	CTGAAG	2 cut(s)	1449, 2796
AcyI	GRCGYC	2 cut(s)	78, 552
AdeI	CACNNNGTG	1 cut(s)	571
AfaI	GTAC	2 cut(s)	2378, 2610
AfiI	CCNNNNNNNGG	8 cut(s)	195, 337, 1273, 1449, 1613, 2821, 2970, 3056
AflIII	ACRYGT	2 cut(s)	1647, 2842
AjiI	CACGTC	1 cut(s)	355
AjnI	CCWGG	8 cut(s)	194, 459, 525, 719, 746, 1291, 1849, 2037
AjuI	GAANNNNNNNTTGG	2 cut(s)	587, 619
Alw21I	GWGCWC	3 cut(s)	525, 675, 1756
Alw26I	GTCTC	3 cut(s)	511, 674, 2609
AlwI	GGATC	4 cut(s)	108, 279, 942, 2805
AlwNI	CAGNNNCTG	3 cut(s)	1496, 1694, 3101
AoxI	GGCC	9 cut(s)	391, 486, 1440, 1599, 1847, 1935, 2082, 2535, 2961
ApoI	RAATTY	9 cut(s)	239, 1657, 1901, 1982, 2245, 2439, 2592, 2919, 3071
ArsI	GACNNNNNNTTYG	4 cut(s)	393, 425, 2180, 2212
Asp700I	GAANNNNTTC	1 cut(s)	2421
AspLEI	GCGC	4 cut(s)	247, 719, 817, 1045
AspS9I	GGNCC	3 cut(s)	102, 210, 1600
AsuC2I	CCSGG	1 cut(s)	96
AsuHPI	GGTGA	5 cut(s)	583, 917, 1094, 1569, 1798
AvaII	GGWCC	2 cut(s)	102, 210
AxyI	CCTNAGG	1 cut(s)	929
BaeGI	GKGCMC	1 cut(s)	1411
BaeI	ACNNNNGTAYC	2 cut(s)	1008, 1041
BalI	TGGCCA	1 cut(s)	2084
BanI	GGYRCC	2 cut(s)	470, 2489
BanII	GRGCYC	1 cut(s)	675
BbsI	GAAGAC	5 cut(s)	456, 471, 1121, 1223, 2899
Bbv12I	GWGCWC	3 cut(s)	525, 675, 1756
BceAI	ACGGC	1 cut(s)	1922
BcgI	CGANNNNNNTGC	4 cut(s)	471, 505, 1898, 1932
BciT130I	CCWGG	8 cut(s)	196, 461, 527, 721, 748, 1293, 1851, 2039
BciVI	GTATCC	1 cut(s)	2825
BcnI	CCSGG	1 cut(s)	96
BcoDI	GTCTC	3 cut(s)	511, 674, 2609
BfaI	CTAG	2 cut(s)	1415, 3065
BfmI	CTRYAG	7 cut(s)	837, 978, 1518, 1524, 1827, 1874, 2071
BfuAI	ACCTGC	1 cut(s)	2488
BfuI	GTATCC	1 cut(s)	2825
BglII	AGATCT	1 cut(s)	579
Bme1390I	CCNGG	9 cut(s)	96, 196, 461, 527, 721, 748, 1293, 1851, 2039
Bme18I	GGWCC	2 cut(s)	102, 210
BmgBI	CACGTC	1 cut(s)	355
BmgT120I	GGNCC	3 cut(s)	102, 210, 1600
BmiI	GGNNCC	5 cut(s)	104, 472, 1352, 1870, 2491
BmrFI	CCNGG	9 cut(s)	96, 196, 461, 527, 721, 748, 1293, 1851, 2039
BmrI	ACTGGG	1 cut(s)	3064
BmuI	ACTGGG	1 cut(s)	3064
BpiI	GAAGAC	5 cut(s)	456, 471, 1121, 1223, 2899
BplI	GAGNNNNNCTC	2 cut(s)	521, 553
BpmI	CTGGAG	4 cut(s)	509, 870, 1032, 1314
Bpu10I	CCTNAGC	2 cut(s)	612, 2658
BpuEI	CTTGAG	2 cut(s)	659, 1521
BpuMI	CCSGG	1 cut(s)	96
BsaAI	YACGTR	2 cut(s)	2565, 2738
BsaHI	GRCGYC	2 cut(s)	78, 552
BsaI	GGTCTC	1 cut(s)	674
BsaXI	ACNNNNNCTCC	6 cut(s)	176, 206, 293, 323, 365, 395
Bsc4I	CCNNNNNNNGG	8 cut(s)	195, 337, 1273, 1449, 1613, 2821, 2970, 3056
Bse1I	ACTGG	3 cut(s)	910, 2800, 3059
Bse21I	CCTNAGG	1 cut(s)	929
Bse3DI	GCAATG	1 cut(s)	913
BseBI	CCWGG	8 cut(s)	196, 461, 527, 721, 748, 1293, 1851, 2039
BseLI	CCNNNNNNNGG	8 cut(s)	195, 337, 1273, 1449, 1613, 2821, 2970, 3056
BseMI	GCAATG	1 cut(s)	913
BseMII	CTCAG	7 cut(s)	626, 943, 1595, 2022, 2427, 2604, 2672
BseNI	ACTGG	3 cut(s)	910, 2800, 3059
BseRI	GAGGAG	4 cut(s)	178, 181, 205, 1363
BseSI	GKGCMC	1 cut(s)	1411
BseYI	CCCAGC	2 cut(s)	81, 2795
Bsh1236I	CGCG	4 cut(s)	245, 669, 1508, 2174
Bsh1285I	CGRYCG	1 cut(s)	485
BshFI	GGCC	9 cut(s)	393, 488, 1442, 1601, 1849, 1937, 2084, 2537, 2963
BshNI	GGYRCC	2 cut(s)	470, 2489
BsiEI	CGRYCG	1 cut(s)	485
BsiHKAI	GWGCWC	3 cut(s)	525, 675, 1756
BsiSI	CCGG	1 cut(s)	96
BslFI	GGGAC	2 cut(s)	88, 413
BslI	CCNNNNNNNGG	8 cut(s)	195, 337, 1273, 1449, 1613, 2821, 2970, 3056
BsmAI	GTCTC	3 cut(s)	511, 674, 2609
BsmBI	CGTCTC	1 cut(s)	511
BsmFI	GGGAC	2 cut(s)	88, 413
BsmI	GAATGC	2 cut(s)	969, 3006
BsnI	GGCC	9 cut(s)	393, 488, 1442, 1601, 1849, 1937, 2084, 2537, 2963
Bso31I	GGTCTC	1 cut(s)	674
Bsp1286I	GDGCHC	4 cut(s)	525, 675, 1411, 1756
Bsp19I	CCATGG	3 cut(s)	46, 1272, 1720
Bsp68I	TCGCGA	2 cut(s)	669, 1508
BspANI	GGCC	9 cut(s)	393, 488, 1442, 1601, 1849, 1937, 2084, 2537, 2963
BspCNI	CTCAG	7 cut(s)	625, 942, 1594, 2023, 2426, 2605, 2671
BspFNI	CGCG	4 cut(s)	245, 669, 1508, 2174
BspHI	TCATGA	3 cut(s)	730, 1065, 2709
BspLI	GGNNCC	5 cut(s)	104, 472, 1352, 1870, 2491
BspMAI	CTGCAG	4 cut(s)	841, 982, 1522, 1528
BspMI	ACCTGC	1 cut(s)	2488
BspPI	GGATC	4 cut(s)	108, 279, 942, 2805
BspQI	GCTCTTC	2 cut(s)	771, 1761
BspT107I	GGYRCC	2 cut(s)	470, 2489
BspTNI	GGTCTC	1 cut(s)	674
BsrBI	CCGCTC	2 cut(s)	434, 2284
BsrDI	GCAATG	1 cut(s)	913
BsrI	ACTGG	3 cut(s)	910, 2800, 3059
BssNI	GRCGYC	2 cut(s)	78, 552
BssT1I	CCWWGG	7 cut(s)	46, 394, 1272, 1596, 1720, 2538, 2964
Bst2UI	CCWGG	8 cut(s)	196, 461, 527, 721, 748, 1293, 1851, 2039
Bst4CI	ACNGT	4 cut(s)	470, 1878, 2345, 2631
Bst6I	CTCTTC	2 cut(s)	771, 1761
BstACI	GRCGYC	2 cut(s)	78, 552
BstAPI	GCANNNNNTGC	5 cut(s)	845, 883, 1334, 1628, 1712
BstBAI	YACGTR	2 cut(s)	2565, 2738
BstC8I	GCNNGC	7 cut(s)	415, 490, 671, 993, 1047, 1339, 1422
BstDSI	CCRYGG	4 cut(s)	46, 1272, 1720, 2172
BstEII	GGTNACC	1 cut(s)	2742
BstENI	CCTNNNNNAGG	1 cut(s)	2819
BstFNI	CGCG	4 cut(s)	245, 669, 1508, 2174
BstHHI	GCGC	4 cut(s)	247, 719, 817, 1045
BstMAI	GTCTC	3 cut(s)	511, 674, 2609
BstMCI	CGRYCG	1 cut(s)	485
BstNI	CCWGG	8 cut(s)	196, 461, 527, 721, 748, 1293, 1851, 2039
BstNSI	RCATGY	2 cut(s)	1651, 1710
BstPI	GGTNACC	1 cut(s)	2742
BstSCI	CCNGG	9 cut(s)	94, 194, 459, 525, 719, 746, 1291, 1849, 2037
BstSFI	CTRYAG	7 cut(s)	837, 978, 1518, 1524, 1827, 1874, 2071
BstSLI	GKGCMC	1 cut(s)	1411
BstSNI	TACGTA	1 cut(s)	2565
BstUI	CGCG	4 cut(s)	245, 669, 1508, 2174
BstV2I	GAAGAC	5 cut(s)	456, 471, 1121, 1223, 2899
BstX2I	RGATCY	1 cut(s)	579
BstYI	RGATCY	1 cut(s)	579
Bsu36I	CCTNAGG	1 cut(s)	929
BsuI	GTATCC	1 cut(s)	2825
BsuRI	GGCC	9 cut(s)	393, 488, 1442, 1601, 1849, 1937, 2084, 2537, 2963
BtgI	CCRYGG	4 cut(s)	46, 1272, 1720, 2172
BtrI	CACGTC	1 cut(s)	355
BtsIMutI	CAGTG	1 cut(s)	2627
BtuMI	TCGCGA	2 cut(s)	669, 1508
BveI	ACCTGC	1 cut(s)	2488
Cac8I	GCNNGC	7 cut(s)	415, 490, 671, 993, 1047, 1339, 1422
CaiI	CAGNNNCTG	3 cut(s)	1496, 1694, 3101
CciI	TCATGA	3 cut(s)	730, 1065, 2709
CfoI	GCGC	4 cut(s)	247, 719, 817, 1045
Cfr13I	GGNCC	3 cut(s)	102, 210, 1600
Cfr42I	CCGCGG	1 cut(s)	2175
CseI	GACGC	1 cut(s)	86
Csp6I	GTAC	2 cut(s)	2377, 2609
CspCI	CAANNNNNGTGG	2 cut(s)	2232, 2267
CviQI	GTAC	2 cut(s)	2377, 2609
DraI	TTTAAA	2 cut(s)	2445, 2511
DraIII	CACNNNGTG	1 cut(s)	571
EaeI	YGGCCR	2 cut(s)	391, 2082
Eam1104I	CTCTTC	2 cut(s)	771, 1761
EarI	CTCTTC	2 cut(s)	771, 1761
EciI	GGCGGA	2 cut(s)	208, 1582
Ecl136II	GAGCTC	1 cut(s)	673
Eco105I	TACGTA	1 cut(s)	2565
Eco130I	CCWWGG	7 cut(s)	46, 394, 1272, 1596, 1720, 2538, 2964
Eco24I	GRGCYC	1 cut(s)	675
Eco31I	GGTCTC	1 cut(s)	674
Eco47I	GGWCC	2 cut(s)	102, 210
Eco53kI	GAGCTC	1 cut(s)	673
Eco57I	CTGAAG	2 cut(s)	1449, 2796
Eco81I	CCTNAGG	1 cut(s)	929
Eco91I	GGTNACC	1 cut(s)	2742
EcoICRI	GAGCTC	1 cut(s)	673
EcoNI	CCTNNNNNAGG	1 cut(s)	2819
EcoO109I	RGGNCCY	2 cut(s)	102, 1600
EcoO65I	GGTNACC	1 cut(s)	2742
EcoRI	GAATTC	1 cut(s)	239
EcoRII	CCWGG	8 cut(s)	194, 459, 525, 719, 746, 1291, 1849, 2037
EcoT14I	CCWWGG	7 cut(s)	46, 394, 1272, 1596, 1720, 2538, 2964
EcoT22I	ATGCAT	1 cut(s)	3008
EcoT38I	GRGCYC	1 cut(s)	675
ErhI	CCWWGG	7 cut(s)	46, 394, 1272, 1596, 1720, 2538, 2964
Esp3I	CGTCTC	1 cut(s)	511
FalI	AAGNNNNNCTT	2 cut(s)	1113, 1145
FaqI	GGGAC	2 cut(s)	88, 413
FauI	CCCGC	4 cut(s)	240, 439, 1413, 2277
FblI	GTMKAC	2 cut(s)	910, 2198
FriOI	GRGCYC	1 cut(s)	675
FspBI	CTAG	2 cut(s)	1415, 3065
GlaI	GCGC	4 cut(s)	246, 718, 816, 1044
GsaI	CCCAGC	2 cut(s)	85, 2799
GsuI	CTGGAG	4 cut(s)	509, 870, 1032, 1314
HaeIII	GGCC	9 cut(s)	393, 488, 1442, 1601, 1849, 1937, 2084, 2537, 2963
HapII	CCGG	1 cut(s)	96
HgaI	GACGC	1 cut(s)	86
HhaI	GCGC	4 cut(s)	247, 719, 817, 1045
Hin1I	GRCGYC	2 cut(s)	78, 552
Hin6I	GCGC	4 cut(s)	245, 717, 815, 1043
HinP1I	GCGC	4 cut(s)	245, 717, 815, 1043
HincII	GTYRAC	1 cut(s)	3062
HindII	GTYRAC	1 cut(s)	3062
HindIII	AAGCTT	1 cut(s)	1366
HpaII	CCGG	1 cut(s)	96
HphI	GGTGA	5 cut(s)	583, 917, 1094, 1569, 1798
Hpy166II	GTNNAC	6 cut(s)	498, 911, 2199, 2341, 2674, 3062
Hpy8I	GTNNAC	6 cut(s)	498, 911, 2199, 2341, 2674, 3062
Hpy99I	CGWCG	4 cut(s)	230, 413, 557, 650
HpyCH4III	ACNGT	4 cut(s)	470, 1878, 2345, 2631
HpyCH4IV	ACGT	7 cut(s)	354, 504, 552, 2465, 2564, 2737, 2842
HpySE526I	ACGT	7 cut(s)	354, 504, 552, 2465, 2564, 2737, 2842
Hsp92I	GRCGYC	2 cut(s)	78, 552
HspAI	GCGC	4 cut(s)	245, 717, 815, 1043
KspI	CCGCGG	1 cut(s)	2175
LguI	GCTCTTC	2 cut(s)	771, 1761
LmnI	GCTCC	7 cut(s)	528, 559, 851, 1173, 1350, 2281, 3017
MaeI	CTAG	2 cut(s)	1415, 3065
MaeII	ACGT	7 cut(s)	354, 504, 552, 2465, 2564, 2737, 2842
MbiI	CCGCTC	2 cut(s)	434, 2284
MfeI	CAATTG	3 cut(s)	881, 951, 2127
MflI	RGATCY	1 cut(s)	579
MhlI	GDGCHC	4 cut(s)	525, 675, 1411, 1756
MlsI	TGGCCA	1 cut(s)	2084
MluNI	TGGCCA	1 cut(s)	2084
MlyI	GAGTC	4 cut(s)	179, 266, 374, 1286
MmeI	TCCRAC	8 cut(s)	153, 207, 294, 312, 618, 641, 1074, 2809
Mox20I	TGGCCA	1 cut(s)	2084
Mph1103I	ATGCAT	1 cut(s)	3008
MroXI	GAANNNNTTC	1 cut(s)	2421
MscI	TGGCCA	1 cut(s)	2084
MslI	CAYNNNNRTG	3 cut(s)	2384, 2679, 2736
Msp20I	TGGCCA	1 cut(s)	2084
MspA1I	CMGCKG	3 cut(s)	1208, 1523, 2174
MspI	CCGG	1 cut(s)	96
MspR9I	CCNGG	9 cut(s)	96, 196, 461, 527, 721, 748, 1293, 1851, 2039
MunI	CAATTG	3 cut(s)	881, 951, 2127
Mva1269I	GAATGC	2 cut(s)	969, 3006
MvaI	CCWGG	8 cut(s)	196, 461, 527, 721, 748, 1293, 1851, 2039
MvnI	CGCG	4 cut(s)	245, 669, 1508, 2174
NciI	CCSGG	1 cut(s)	96
NcoI	CCATGG	3 cut(s)	46, 1272, 1720
NlaIV	GGNNCC	5 cut(s)	104, 472, 1352, 1870, 2491
NmuCI	GTSAC	8 cut(s)	277, 862, 1193, 1472, 1878, 1996, 2162, 2179
NruI	TCGCGA	2 cut(s)	669, 1508
NsiI	ATGCAT	1 cut(s)	3008
NspI	RCATGY	2 cut(s)	1651, 1710
PagI	TCATGA	3 cut(s)	730, 1065, 2709
PciI	ACATGT	1 cut(s)	1647
PciSI	GCTCTTC	2 cut(s)	771, 1761
PcsI	WCGNNNNNNNCGW	3 cut(s)	234, 491, 708
PctI	GAATGC	2 cut(s)	969, 3006
PdmI	GAANNNNTTC	1 cut(s)	2421
PfeI	GAWTC	8 cut(s)	514, 664, 727, 956, 1487, 1913, 2018, 2156
PflMI	CCANNNNNTGG	1 cut(s)	1449
PfoI	TCCNGGA	1 cut(s)	525
Ple19I	CGATCG	1 cut(s)	485
PleI	GAGTC	4 cut(s)	179, 266, 374, 1285
PpsI	GAGTC	4 cut(s)	179, 266, 374, 1285
Ppu21I	YACGTR	2 cut(s)	2565, 2738
PpuMI	RGGWCCY	1 cut(s)	102
PscI	ACATGT	1 cut(s)	1647
PsiI	TTATAA	2 cut(s)	1028, 1820
Psp124BI	GAGCTC	1 cut(s)	675
Psp5II	RGGWCCY	1 cut(s)	102
Psp6I	CCWGG	8 cut(s)	194, 459, 525, 719, 746, 1291, 1849, 2037
PspEI	GGTNACC	1 cut(s)	2742
PspFI	CCCAGC	2 cut(s)	81, 2795
PspGI	CCWGG	8 cut(s)	194, 459, 525, 719, 746, 1291, 1849, 2037
PspN4I	GGNNCC	5 cut(s)	104, 472, 1352, 1870, 2491
PspPI	GGNCC	3 cut(s)	102, 210, 1600
PspPPI	RGGWCCY	1 cut(s)	102
PstI	CTGCAG	4 cut(s)	841, 982, 1522, 1528
PstNI	CAGNNNCTG	3 cut(s)	1496, 1694, 3101
PsuI	RGATCY	1 cut(s)	579
PvuI	CGATCG	1 cut(s)	485
PvuII	CAGCTG	2 cut(s)	1208, 1523
RruI	TCGCGA	2 cut(s)	669, 1508
RsaI	GTAC	2 cut(s)	2378, 2610
RsaNI	GTAC	2 cut(s)	2377, 2609
RseI	CAYNNNNRTG	3 cut(s)	2384, 2679, 2736
SacI	GAGCTC	1 cut(s)	675
SacII	CCGCGG	1 cut(s)	2175
SapI	GCTCTTC	2 cut(s)	771, 1761
Sau96I	GGNCC	3 cut(s)	102, 210, 1600
SchI	GAGTC	4 cut(s)	179, 266, 374, 1286
ScrFI	CCNGG	9 cut(s)	96, 196, 461, 527, 721, 748, 1293, 1851, 2039
SduI	GDGCHC	4 cut(s)	525, 675, 1411, 1756
SfcI	CTRYAG	7 cut(s)	837, 978, 1518, 1524, 1827, 1874, 2071
Sfr303I	CCGCGG	1 cut(s)	2175
SgrBI	CCGCGG	1 cut(s)	2175
SinI	GGWCC	2 cut(s)	102, 210
SmiMI	CAYNNNNRTG	3 cut(s)	2384, 2679, 2736
SmlI	CTYRAG	3 cut(s)	16, 674, 1536
SmoI	CTYRAG	3 cut(s)	16, 674, 1536
SnaBI	TACGTA	1 cut(s)	2565
SspMI	CTAG	2 cut(s)	1415, 3065
SstI	GAGCTC	1 cut(s)	675
StyD4I	CCNGG	9 cut(s)	94, 194, 459, 525, 719, 746, 1291, 1849, 2037
StyI	CCWWGG	7 cut(s)	46, 394, 1272, 1596, 1720, 2538, 2964
TaaI	ACNGT	4 cut(s)	470, 1878, 2345, 2631
TaiI	ACGT	7 cut(s)	357, 507, 555, 2468, 2567, 2740, 2845
TatI	WGTACW	1 cut(s)	2376
TauI	GCSGC	1 cut(s)	393
TfiI	GAWTC	8 cut(s)	514, 664, 727, 956, 1487, 1913, 2018, 2156
TscAI	CASTG	1 cut(s)	2634
TseFI	GTSAC	8 cut(s)	277, 862, 1193, 1472, 1878, 1996, 2162, 2179
Tsp45I	GTSAC	8 cut(s)	277, 862, 1193, 1472, 1878, 1996, 2162, 2179
TspGWI	ACGGA	2 cut(s)	214, 265
TspRI	CASTG	1 cut(s)	2634
Van91I	CCANNNNNTGG	1 cut(s)	1449
VpaK11BI	GGWCC	2 cut(s)	102, 210
XagI	CCTNNNNNAGG	1 cut(s)	2819
XapI	RAATTY	9 cut(s)	239, 1657, 1901, 1982, 2245, 2439, 2592, 2919, 3071
XceI	RCATGY	2 cut(s)	1651, 1710
XcmI	CCANNNNNNNNNTGG	2 cut(s)	691, 2477
XmiI	GTMKAC	2 cut(s)	910, 2198
XmnI	GAANNNNTTC	1 cut(s)	2421
XspI	CTAG	2 cut(s)	1415, 3065
ZraI	GACGTC	1 cut(s)	553
Zsp2I	ATGCAT	1 cut(s)	3008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.