Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0014995

Physical Location & Seq

Genomic Coordinates Forward (+)

30443737 .. 30445365

Gene Structure 1629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G360900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 549 bp

ATGAGAGAACGAATGGAAAGACTGGTTCTTCTTCCTTTCACATTTGGTTGTGTTTCTGAGTCTAGCGTTGCTGTTGGTGTACAGCCGCCCAGAAGATCAAAATCAGACACAATTCCATCTCCAATAAGAACTAAAGAAGTAGGAGATGAAGAAGAGGAAGAAGATAGCTTATCAGGTGAAAGCACGAAGAACTCATTTAGATCCTTGTCCCTTCCAAAACCAAACATATCTACCAGTGGTATTCACAGGCTCTTCAAGGGTTTCAAGAATTTCTCTCAGATATTTGTGTACAAGGATGATGATATGGAAGAAATAATGGAAATGGATATGGAAATAGGGGGTCCCACAGATGTGAAGCATGTGACACACATAGGCTGGGATGGTTCTGCTTCTGCTGCATCTGCAACGACTGACCCCATTAGGGGATGGGATAATCTCATATCTCCTGATCTGCTCTCTGTTTCCCCTGTTTCTTGGAGCCAATTTGAGCTCTCTATGCCTTCCCAAGCTGATGTTGCAGTTCCTCTTGTTAACGGCTCTTCCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0008064 GO:0008150 GO:0009653 GO:0009664 GO:0009826 GO:0009832 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010215 GO:0016020 GO:0016043 GO:0016049 GO:0016324 GO:0017157 GO:0022414 GO:0022607 GO:0030154 GO:0030198 GO:0030832 GO:0030833 GO:0032271 GO:0032501 GO:0032502 GO:0032535 GO:0032879 GO:0032956 GO:0032970 GO:0032989 GO:0033043 GO:0040007 GO:0042546 GO:0043062 GO:0043254 GO:0044085 GO:0044087 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045229 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0051046 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051704 GO:0060560 GO:0060627 GO:0065007 GO:0065008 GO:0070726 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071840 GO:0071944 GO:0090066 GO:0098590 GO:0110053 GO:1902903 GO:1903530

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PBD

Protein Analysis

183

Amino Acids

19.97

Weight (kDa)

4.68

Isoelectric Point (pI)

57.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014995)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16490
fragaria_vesca	FvH4_6g00540
malus_domestica	MD04G1244300.v1.1
prunus_persica	Prupe.6G360900_v2.0.a1
pyrus_communis	pycom04g21520 pycom12g23830
rosa_chinensis	RchiOBHm_Chr3g0447931
rosa_laevigata	RLG00000025960
rosa_multiflora	Rmu_sc0005969.1_g000005
rosa_roxburghii	Rroxscaffold_6G00426120
rosa_rugosa	Rorug02G0607100.1
rosa_samantha	Rh3AG006400 Rh3BG005900 Rh3CG006300 Rh3DG006600
rosa_wichuraiana	Rw3G000500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	86
AclWI	GGATC	1 cut(s)	195
AcsI	RAATTY	1 cut(s)	268
AfaI	GTAC	2 cut(s)	81, 290
AfiI	CCNNNNNNNGG	2 cut(s)	421, 422
AgsI	TTSAA	2 cut(s)	256, 265
AleI	CACNNNNGTG	1 cut(s)	350
AluBI	AGCT	3 cut(s)	168, 490, 509
AluI	AGCT	3 cut(s)	168, 490, 509
Alw21I	GWGCWC	1 cut(s)	492
AlwI	GGATC	1 cut(s)	195
ApeKI	GCWGC	1 cut(s)	395
ApoI	RAATTY	1 cut(s)	268
AspS9I	GGNCC	1 cut(s)	341
AsuHPI	GGTGA	1 cut(s)	188
AvaII	GGWCC	1 cut(s)	341
BanII	GRGCYC	1 cut(s)	492
Bbv12I	GWGCWC	1 cut(s)	492
BbvI	GCAGC	1 cut(s)	382
BccI	CCATC	3 cut(s)	124, 374, 420
BfaI	CTAG	1 cut(s)	63
BisI	GCNGC	2 cut(s)	86, 396
BlsI	GCNGC	2 cut(s)	87, 397
Bme18I	GGWCC	1 cut(s)	341
BmgT120I	GGNCC	1 cut(s)	341
BmiI	GGNNCC	3 cut(s)	342, 343, 479
BmsI	GCATC	1 cut(s)	407
BsaBI	GATNNNNATC	1 cut(s)	100
Bsc4I	CCNNNNNNNGG	2 cut(s)	421, 422
Bse1I	ACTGG	2 cut(s)	27, 234
Bse8I	GATNNNNATC	1 cut(s)	100
BseGI	GGATG	3 cut(s)	301, 385, 431
BseJI	GATNNNNATC	1 cut(s)	100
BseLI	CCNNNNNNNGG	2 cut(s)	421, 422
BseMII	CTCAG	2 cut(s)	48, 290
BseNI	ACTGG	2 cut(s)	27, 234
BseXI	GCAGC	1 cut(s)	382
BseYI	CCCAGC	1 cut(s)	375
BsiHKAI	GWGCWC	1 cut(s)	492
BslFI	GGGAC	2 cut(s)	193, 327
BslI	CCNNNNNNNGG	2 cut(s)	421, 422
BsmFI	GGGAC	2 cut(s)	193, 327
Bsp1286I	GDGCHC	1 cut(s)	492
Bsp1407I	TGTACA	2 cut(s)	79, 288
Bsp143I	GATC	3 cut(s)	95, 200, 448
BspACI	CCGC	1 cut(s)	86
BspCNI	CTCAG	2 cut(s)	49, 289
BspLI	GGNNCC	3 cut(s)	342, 343, 479
BspPI	GGATC	1 cut(s)	195
BspQI	GCTCTTC	2 cut(s)	257, 544
BsrGI	TGTACA	2 cut(s)	79, 288
BsrI	ACTGG	2 cut(s)	27, 234
BssMI	GATC	3 cut(s)	95, 200, 448
Bst6I	CTCTTC	3 cut(s)	147, 257, 544
BstAUI	TGTACA	2 cut(s)	79, 288
BstDEI	CTNAG	2 cut(s)	57, 276
BstF5I	GGATG	3 cut(s)	301, 385, 431
BstKTI	GATC	3 cut(s)	98, 203, 451
BstMBI	GATC	3 cut(s)	95, 200, 448
BstMWI	GCNNNNNNNGC	4 cut(s)	395, 401, 496, 515
BstNSI	RCATGY	1 cut(s)	362
BstV1I	GCAGC	1 cut(s)	382
BstX2I	RGATCY	1 cut(s)	200
BstYI	RGATCY	1 cut(s)	200
BtsCI	GGATG	3 cut(s)	301, 385, 431
BtsIMutI	CAGTG	1 cut(s)	241
Cfr13I	GGNCC	1 cut(s)	341
Csp6I	GTAC	2 cut(s)	80, 289
CviAII	CATG	1 cut(s)	359
CviJI	RGCY	8 cut(s)	85, 168, 250, 375, 480, 490, 509, 537
CviKI_1	RGCY	8 cut(s)	85, 168, 250, 375, 480, 490, 509, 537
CviQI	GTAC	2 cut(s)	80, 289
DdeI	CTNAG	2 cut(s)	57, 276
DpnI	GATC	3 cut(s)	97, 202, 450
DpnII	GATC	3 cut(s)	95, 200, 448
Eam1104I	CTCTTC	3 cut(s)	147, 257, 544
EarI	CTCTTC	3 cut(s)	147, 257, 544
Ecl136II	GAGCTC	1 cut(s)	490
Eco24I	GRGCYC	1 cut(s)	492
Eco47I	GGWCC	1 cut(s)	341
Eco53kI	GAGCTC	1 cut(s)	490
EcoICRI	GAGCTC	1 cut(s)	490
EcoO109I	RGGNCCY	1 cut(s)	341
EcoT38I	GRGCYC	1 cut(s)	492
FaeI	CATG	1 cut(s)	362
FaiI	YATR	7 cut(s)	227, 305, 329, 360, 371, 440, 497
FaqI	GGGAC	2 cut(s)	193, 327
FatI	CATG	1 cut(s)	358
Fnu4HI	GCNGC	2 cut(s)	86, 396
FokI	GGATG	3 cut(s)	308, 392, 438
FriOI	GRGCYC	1 cut(s)	492
Fsp4HI	GCNGC	2 cut(s)	86, 396
FspBI	CTAG	1 cut(s)	63
GluI	GCNGC	2 cut(s)	86, 396
GsaI	CCCAGC	1 cut(s)	379
Hin1II	CATG	1 cut(s)	362
HincII	GTYRAC	1 cut(s)	532
HindII	GTYRAC	1 cut(s)	532
HinfI	GANTC	1 cut(s)	59
HpaI	GTTAAC	1 cut(s)	532
HphI	GGTGA	1 cut(s)	188
Hpy166II	GTNNAC	3 cut(s)	80, 289, 532
Hpy188I	TCNGA	3 cut(s)	58, 106, 279
Hpy188III	TCNNGA	2 cut(s)	265, 446
Hpy8I	GTNNAC	3 cut(s)	80, 289, 532
HpyAV	CCTTC	2 cut(s)	221, 510
HpyCH4V	TGCA	3 cut(s)	398, 404, 518
HpyF10VI	GCNNNNNNNGC	4 cut(s)	395, 401, 496, 515
HpyF3I	CTNAG	2 cut(s)	57, 276
Hsp92II	CATG	1 cut(s)	362
KflI	GGGWCCC	1 cut(s)	341
KspAI	GTTAAC	1 cut(s)	532
Kzo9I	GATC	3 cut(s)	95, 200, 448
LguI	GCTCTTC	2 cut(s)	257, 544
LmnI	GCTCC	1 cut(s)	477
LpnPI	CCDG	8 cut(s)	8, 103, 159, 232, 247, 361, 459, 480
Lsp1109I	GCAGC	1 cut(s)	382
LweI	GCATC	1 cut(s)	407
MaeI	CTAG	1 cut(s)	63
MaeIII	GTNAC	1 cut(s)	361
MalI	GATC	3 cut(s)	97, 202, 450
MboI	GATC	3 cut(s)	95, 200, 448
MflI	RGATCY	1 cut(s)	200
MhlI	GDGCHC	1 cut(s)	492
MluCI	AATT	3 cut(s)	111, 268, 482
MlyI	GAGTC	1 cut(s)	68
MnlI	CCTC	2 cut(s)	148, 534
MseI	TTAA	2 cut(s)	531, 547
MslI	CAYNNNNRTG	1 cut(s)	350
MwoI	GCNNNNNNNGC	4 cut(s)	395, 401, 496, 515
NdeII	GATC	3 cut(s)	95, 200, 448
NlaIII	CATG	1 cut(s)	362
NlaIV	GGNNCC	3 cut(s)	342, 343, 479
NmuCI	GTSAC	1 cut(s)	361
NspI	RCATGY	1 cut(s)	362
OliI	CACNNNNGTG	1 cut(s)	350
PciSI	GCTCTTC	2 cut(s)	257, 544
PkrI	GCNGC	2 cut(s)	87, 397
PleI	GAGTC	1 cut(s)	67
PpsI	GAGTC	1 cut(s)	67
PpuMI	RGGWCCY	1 cut(s)	341
Psp124BI	GAGCTC	1 cut(s)	492
Psp5II	RGGWCCY	1 cut(s)	341
PspFI	CCCAGC	1 cut(s)	375
PspN4I	GGNNCC	3 cut(s)	342, 343, 479
PspPI	GGNCC	1 cut(s)	341
PspPPI	RGGWCCY	1 cut(s)	341
PsuI	RGATCY	1 cut(s)	200
RsaI	GTAC	2 cut(s)	81, 290
RsaNI	GTAC	2 cut(s)	80, 289
RseI	CAYNNNNRTG	1 cut(s)	350
SacI	GAGCTC	1 cut(s)	492
SapI	GCTCTTC	2 cut(s)	257, 544
SaqAI	TTAA	2 cut(s)	531, 547
SatI	GCNGC	2 cut(s)	86, 396
Sau3AI	GATC	3 cut(s)	95, 200, 448
Sau96I	GGNCC	1 cut(s)	341
SchI	GAGTC	1 cut(s)	68
SduI	GDGCHC	1 cut(s)	492
SetI	ASST	4 cut(s)	170, 178, 492, 511
SfaNI	GCATC	1 cut(s)	407
SinI	GGWCC	1 cut(s)	341
SmiMI	CAYNNNNRTG	1 cut(s)	350
Sse9I	AATT	3 cut(s)	111, 268, 482
SsiI	CCGC	1 cut(s)	86
SspMI	CTAG	1 cut(s)	63
SstI	GAGCTC	1 cut(s)	492
TasI	AATT	3 cut(s)	111, 268, 482
TatI	WGTACW	2 cut(s)	79, 288
TauI	GCSGC	1 cut(s)	88
Tru1I	TTAA	2 cut(s)	531, 547
Tru9I	TTAA	2 cut(s)	531, 547
TscAI	CASTG	1 cut(s)	241
TseFI	GTSAC	1 cut(s)	361
TseI	GCWGC	1 cut(s)	395
Tsp45I	GTSAC	1 cut(s)	361
TspDTI	ATGAA	1 cut(s)	162
TspRI	CASTG	1 cut(s)	241
VpaK11BI	GGWCC	1 cut(s)	341
XapI	RAATTY	1 cut(s)	268
XceI	RCATGY	1 cut(s)	362
XspI	CTAG	1 cut(s)	63

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.