Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0005131

Physical Location & Seq

Genomic Coordinates Reverse (-)

1586742 .. 1591236

Gene Structure 4495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G011800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 939 bp

ATGGCAGCCCTACTGTACCAGATATTGTCGTCCTCAGCACTGGTGTCACTGGGACTCTACCACATGGTGGCCACCACCCGCAACCACCTCAAGTCCCCACAGTCGTACGCTGCCAAGCCCTACCACCCCTTCCCTCTCTCCTCCTCTTCATCTTCGTCTTCCAATCATCATCGCCTCAGGTACTTGCAGCTCTACGCCGTCATTGCCTTCCTCATGGTTGCCGTCGCCCACCAGACCTTCACCTCTTTCGACGCCGATCCACTCCTCAAGGGCCGCACCCCCGTCCACCGGTTCACCTCTCTGCAGTCCGCAGCCTCCCTCTTCCTGTTTCTGCTGCTCACGCTCGCTCTGCTGCTCTCGGAGTGGGCTCCGTCTGTGCTGCCACTGCCCTCCGATCTTGTCTTTGGCCTGGCTGCCACCCTCTTCTACCTACAGTGCCTGGTCTCCTGGGGTGCCGCTTCGGTGCAGATGTCGGATCTGCAGGCCAAGTGTGACTCGGTGTCAGGTCGGATCTCGGCGGTGGCGTCAGGGCTGTGCGTGGTGTTGGCATGCCAGCCGCGGTTGTTTGTGGCGGATGTGGGATTGGGAGCGGCCATGTGCCTGCAGGGGCTGTGGGTGTTGCAGACGGGGCTGTCACTCTACGTGGAGGCGTTCATCCCGGAGGGCTGCCACAGGCTGCTGGATGTGGTGAGCGGGGTCGAGGGTTCCACCAAGTGCGACCTCGACGAGTCCCGCTTCAGGGCCGTGGCAATTCTGGATTTGGTGTTCTTGGTCCATGTCATGTTCGTCTTGCTCATTGTCATGGTCACCTACGCTGTTGTTTCCAAGTCCGTTGGCATCCGCAGATTGGGTTCTTACGAGGCCTTGCCCAACGCTGCTCCCTCCTCCGACCACAACAACCACATTCAGATGAAAGCCTTGAGCGGCACCCAGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF716

Protein Analysis

313

Amino Acids

33.64

Weight (kDa)

8.16

Isoelectric Point (pI)

48.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005131)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13890 AT5G13890 AT5G13890
fragaria_vesca	FvH4_6g31080
malus_domestica	MD09G1001100.v1.1 MD17G1004200.v1.1
prunus_persica	Prupe.7G011800_v2.0.a1 Prupe.7G011800_v2.0.a1 Prupe.7G011800_v2.0.a1
pyrus_communis	pycom111g00090
rosa_chinensis	RchiOBHm_Chr2g0137761 RchiOBHm_Chr2g0176701
rosa_laevigata	RLG00000019674 RLG00000022437
rosa_multiflora	Rmu_co8159502.1_g000001 Rmu_ssc0000468.1_g000007
rosa_rugosa	Rorug02G0345000 Rorug02G0345100 Rorug02G0345200 Rorug02G0597700
rosa_samantha	Rh2AG392600 Rh2AG675100 Rh2BG400200 Rh2BG686300 Rh2CG379300 Rh2CG649500 Rh2DG415200 Rh2DG700400
rosa_wichuraiana	Rw2G032160 Rw2G055410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	631
AccB1I	GGYRCC	2 cut(s)	452, 926
AccB7I	CCANNNNNTGG	1 cut(s)	67
AccBSI	CCGCTC	3 cut(s)	590, 693, 924
AccII	CGCG	1 cut(s)	559
AclWI	GGATC	3 cut(s)	251, 483, 518
AcoI	YGGCCR	2 cut(s)	69, 591
AcuI	CTGAAG	1 cut(s)	721
AcyI	GRCGYC	2 cut(s)	252, 524
AdeI	CACNNNGTG	2 cut(s)	67, 714
AfaI	GTAC	3 cut(s)	17, 107, 182
AfiI	CCNNNNNNNGG	5 cut(s)	67, 288, 738, 739, 847
AgeI	ACCGGT	1 cut(s)	288
AhdI	GACNNNNNGTC	1 cut(s)	499
AjnI	CCWGG	4 cut(s)	408, 438, 446, 930
AloI	GAACNNNNNNTCC	2 cut(s)	749, 781
AluBI	AGCT	1 cut(s)	190
AluI	AGCT	1 cut(s)	190
Alw26I	GTCTC	1 cut(s)	448
AlwI	GGATC	3 cut(s)	251, 483, 518
AlwNI	CAGNNNCTG	2 cut(s)	439, 610
AoxI	GGCC	7 cut(s)	69, 271, 406, 483, 591, 741, 861
AsiGI	ACCGGT	1 cut(s)	288
AspS9I	GGNCC	3 cut(s)	271, 741, 772
AsuC2I	CCSGG	1 cut(s)	659
AsuHPI	GGTGA	4 cut(s)	232, 286, 700, 799
AvaII	GGWCC	1 cut(s)	772
AxyI	CCTNAGG	1 cut(s)	176
BalI	TGGCCA	1 cut(s)	71
BanI	GGYRCC	2 cut(s)	452, 926
BanII	GRGCYC	1 cut(s)	370
BbsI	GAAGAC	1 cut(s)	150
BbvCI	CCTCAGC	1 cut(s)	34
BceAI	ACGGC	3 cut(s)	182, 206, 728
BciT130I	CCWGG	4 cut(s)	410, 440, 448, 932
BcnI	CCSGG	1 cut(s)	659
BcoDI	GTCTC	1 cut(s)	448
BfmI	CTRYAG	4 cut(s)	302, 431, 479, 602
Bme1390I	CCNGG	5 cut(s)	410, 440, 448, 659, 932
Bme18I	GGWCC	1 cut(s)	772
BmeRI	GACNNNNNGTC	1 cut(s)	499
BmgT120I	GGNCC	3 cut(s)	271, 741, 772
BmiI	GGNNCC	4 cut(s)	369, 454, 706, 928
BmrFI	CCNGG	5 cut(s)	410, 440, 448, 659, 932
BmrI	ACTGGG	1 cut(s)	59
BmsI	GCATC	1 cut(s)	846
BmuI	ACTGGG	1 cut(s)	59
BpiI	GAAGAC	1 cut(s)	150
Bpu10I	CCTNAGC	1 cut(s)	34
BpuEI	CTTGAG	2 cut(s)	74, 251
BpuMI	CCSGG	1 cut(s)	659
BsaAI	YACGTR	1 cut(s)	643
BsaHI	GRCGYC	2 cut(s)	252, 524
BsaI	GGTCTC	1 cut(s)	448
BsaJI	CCNNGG	4 cut(s)	447, 557, 744, 930
BsaWI	WCCGGW	1 cut(s)	288
Bsc4I	CCNNNNNNNGG	5 cut(s)	67, 288, 738, 739, 847
Bse118I	RCCGGY	1 cut(s)	288
Bse1I	ACTGG	2 cut(s)	45, 54
Bse21I	CCTNAGG	1 cut(s)	176
Bse3DI	GCAATG	1 cut(s)	201
BseBI	CCWGG	4 cut(s)	410, 440, 448, 932
BseDI	CCNNGG	4 cut(s)	447, 557, 744, 930
BseGI	GGATG	4 cut(s)	580, 654, 688, 837
BseLI	CCNNNNNNNGG	5 cut(s)	67, 288, 738, 739, 847
BseMI	GCAATG	1 cut(s)	201
BseMII	CTCAG	2 cut(s)	48, 190
BseNI	ACTGG	2 cut(s)	45, 54
BseRI	GAGGAG	4 cut(s)	130, 133, 254, 874
BsgI	GTGCAG	1 cut(s)	485
Bsh1236I	CGCG	1 cut(s)	559
BshFI	GGCC	7 cut(s)	71, 273, 408, 485, 593, 743, 863
BshNI	GGYRCC	2 cut(s)	452, 926
BshTI	ACCGGT	1 cut(s)	288
BsiSI	CCGG	2 cut(s)	289, 659
BsiWI	CGTACG	1 cut(s)	105
BslFI	GGGAC	3 cut(s)	66, 79, 715
BslI	CCNNNNNNNGG	5 cut(s)	67, 288, 738, 739, 847
BsmAI	GTCTC	1 cut(s)	448
BsmFI	GGGAC	3 cut(s)	66, 79, 715
BsnI	GGCC	7 cut(s)	71, 273, 408, 485, 593, 743, 863
Bso31I	GGTCTC	1 cut(s)	448
Bsp1286I	GDGCHC	1 cut(s)	370
Bsp143I	GATC	4 cut(s)	256, 394, 475, 510
BspANI	GGCC	7 cut(s)	71, 273, 408, 485, 593, 743, 863
BspCNI	CTCAG	2 cut(s)	47, 189
BspFNI	CGCG	1 cut(s)	559
BspLI	GGNNCC	4 cut(s)	369, 454, 706, 928
BspMAI	CTGCAG	3 cut(s)	306, 483, 606
BspPI	GGATC	3 cut(s)	251, 483, 518
BspT107I	GGYRCC	2 cut(s)	452, 926
BspTNI	GGTCTC	1 cut(s)	448
BsrBI	CCGCTC	3 cut(s)	590, 693, 924
BsrDI	GCAATG	1 cut(s)	201
BsrFI	RCCGGY	1 cut(s)	288
BsrI	ACTGG	2 cut(s)	45, 54
BssAI	RCCGGY	1 cut(s)	288
BssECI	CCNNGG	4 cut(s)	447, 557, 744, 930
BssMI	GATC	4 cut(s)	256, 394, 475, 510
BssNI	GRCGYC	2 cut(s)	252, 524
Bst2UI	CCWGG	4 cut(s)	410, 440, 448, 932
Bst4CI	ACNGT	3 cut(s)	15, 102, 435
Bst6I	CTCTTC	3 cut(s)	151, 326, 428
BstACI	GRCGYC	2 cut(s)	252, 524
BstBAI	YACGTR	1 cut(s)	643
BstC8I	GCNNGC	5 cut(s)	345, 483, 550, 554, 602
BstDEI	CTNAG	3 cut(s)	34, 176, 936
BstDSI	CCRYGG	2 cut(s)	557, 744
BstEII	GGTNACC	1 cut(s)	805
BstF5I	GGATG	4 cut(s)	580, 654, 688, 837
BstFNI	CGCG	1 cut(s)	559
BstKTI	GATC	4 cut(s)	259, 397, 478, 513
BstMAI	GTCTC	1 cut(s)	448
BstMBI	GATC	4 cut(s)	256, 394, 475, 510
BstMWI	GCNNNNNNNGC	5 cut(s)	203, 340, 349, 385, 628
BstNI	CCWGG	4 cut(s)	410, 440, 448, 932
BstNSI	RCATGY	1 cut(s)	552
BstPI	GGTNACC	1 cut(s)	805
BstSCI	CCNGG	5 cut(s)	408, 438, 446, 657, 930
BstSFI	CTRYAG	4 cut(s)	302, 431, 479, 602
BstUI	CGCG	1 cut(s)	559
BstV2I	GAAGAC	1 cut(s)	150
BstX2I	RGATCY	2 cut(s)	475, 510
BstYI	RGATCY	2 cut(s)	475, 510
Bsu36I	CCTNAGG	1 cut(s)	176
BsuRI	GGCC	7 cut(s)	71, 273, 408, 485, 593, 743, 863
BtgI	CCRYGG	2 cut(s)	557, 744
BtgZI	GCGATG	1 cut(s)	155
BtsCI	GGATG	4 cut(s)	580, 654, 688, 837
BtsI	GCAGTG	1 cut(s)	383
BtsIMutI	CAGTG	4 cut(s)	38, 47, 383, 440
Cac8I	GCNNGC	5 cut(s)	345, 483, 550, 554, 602
CaiI	CAGNNNCTG	2 cut(s)	439, 610
Cfr10I	RCCGGY	1 cut(s)	288
Cfr13I	GGNCC	3 cut(s)	271, 741, 772
Cfr42I	CCGCGG	1 cut(s)	560
CseI	GACGC	2 cut(s)	260, 513
Csp6I	GTAC	3 cut(s)	16, 106, 181
CspAI	ACCGGT	1 cut(s)	288
CviAII	CATG	7 cut(s)	64, 214, 549, 595, 776, 781, 802
CviQI	GTAC	3 cut(s)	16, 106, 181
DdeI	CTNAG	3 cut(s)	34, 176, 936
DpnI	GATC	4 cut(s)	258, 396, 477, 512
DpnII	GATC	4 cut(s)	256, 394, 475, 510
DraIII	CACNNNGTG	2 cut(s)	67, 714
DrdI	GACNNNNNNGTC	1 cut(s)	631
DriI	GACNNNNNGTC	1 cut(s)	499
DseDI	GACNNNNNNGTC	1 cut(s)	631
EaeI	YGGCCR	2 cut(s)	69, 591
Eam1104I	CTCTTC	3 cut(s)	151, 326, 428
Eam1105I	GACNNNNNGTC	1 cut(s)	499
EarI	CTCTTC	3 cut(s)	151, 326, 428
EciI	GGCGGA	1 cut(s)	587
Eco147I	AGGCCT	1 cut(s)	863
Eco24I	GRGCYC	1 cut(s)	370
Eco31I	GGTCTC	1 cut(s)	448
Eco47I	GGWCC	1 cut(s)	772
Eco57I	CTGAAG	1 cut(s)	721
Eco81I	CCTNAGG	1 cut(s)	176
Eco91I	GGTNACC	1 cut(s)	805
EcoO65I	GGTNACC	1 cut(s)	805
EcoRII	CCWGG	4 cut(s)	408, 438, 446, 930
EcoT38I	GRGCYC	1 cut(s)	370
FaeI	CATG	7 cut(s)	67, 217, 552, 598, 779, 784, 805
FaiI	YATR	7 cut(s)	65, 215, 550, 596, 777, 782, 803
FaqI	GGGAC	3 cut(s)	66, 79, 715
FatI	CATG	7 cut(s)	63, 213, 548, 594, 775, 780, 801
FauI	CCCGC	3 cut(s)	86, 686, 740
FokI	GGATG	4 cut(s)	587, 641, 695, 824
FriOI	GRGCYC	1 cut(s)	370
HaeIII	GGCC	7 cut(s)	71, 273, 408, 485, 593, 743, 863
HapII	CCGG	2 cut(s)	289, 659
HgaI	GACGC	2 cut(s)	260, 513
Hin1I	GRCGYC	2 cut(s)	252, 524
Hin1II	CATG	7 cut(s)	67, 217, 552, 598, 779, 784, 805
HinfI	GANTC	3 cut(s)	54, 494, 728
HpaII	CCGG	2 cut(s)	289, 659
HphI	GGTGA	4 cut(s)	232, 286, 700, 799
Hpy166II	GTNNAC	2 cut(s)	286, 294
Hpy188I	TCNGA	6 cut(s)	361, 394, 475, 510, 889, 909
Hpy188III	TCNNGA	1 cut(s)	755
Hpy8I	GTNNAC	2 cut(s)	286, 294
Hpy99I	CGWCG	3 cut(s)	227, 254, 728
HpyAV	CCTTC	3 cut(s)	139, 217, 247
HpyCH4III	ACNGT	3 cut(s)	15, 102, 435
HpyCH4IV	ACGT	1 cut(s)	642
HpyCH4V	TGCA	6 cut(s)	187, 304, 466, 481, 604, 622
HpyF10VI	GCNNNNNNNGC	5 cut(s)	203, 340, 349, 385, 628
HpyF3I	CTNAG	3 cut(s)	34, 176, 936
HpySE526I	ACGT	1 cut(s)	642
Hsp92I	GRCGYC	2 cut(s)	252, 524
Hsp92II	CATG	7 cut(s)	67, 217, 552, 598, 779, 784, 805
KspI	CCGCGG	1 cut(s)	560
Kzo9I	GATC	4 cut(s)	256, 394, 475, 510
LmnI	GCTCC	3 cut(s)	373, 587, 883
LweI	GCATC	1 cut(s)	846
MaeII	ACGT	1 cut(s)	642
MaeIII	GTNAC	4 cut(s)	45, 491, 633, 805
MalI	GATC	4 cut(s)	258, 396, 477, 512
MbiI	CCGCTC	3 cut(s)	590, 693, 924
MboI	GATC	4 cut(s)	256, 394, 475, 510
MboII	GAAGA	5 cut(s)	138, 144, 150, 313, 415
MflI	RGATCY	2 cut(s)	475, 510
MhlI	GDGCHC	1 cut(s)	370
MlsI	TGGCCA	1 cut(s)	71
MluCI	AATT	1 cut(s)	750
MluNI	TGGCCA	1 cut(s)	71
MlyI	GAGTC	3 cut(s)	48, 488, 737
MmeI	TCCRAC	3 cut(s)	453, 488, 912
Mox20I	TGGCCA	1 cut(s)	71
MscI	TGGCCA	1 cut(s)	71
MslI	CAYNNNNRTG	2 cut(s)	800, 908
Msp20I	TGGCCA	1 cut(s)	71
MspA1I	CMGCKG	1 cut(s)	559
MspI	CCGG	2 cut(s)	289, 659
MspR9I	CCNGG	5 cut(s)	410, 440, 448, 659, 932
MvaI	CCWGG	4 cut(s)	410, 440, 448, 932
MvnI	CGCG	1 cut(s)	559
MwoI	GCNNNNNNNGC	5 cut(s)	203, 340, 349, 385, 628
NciI	CCSGG	1 cut(s)	659
NdeII	GATC	4 cut(s)	256, 394, 475, 510
NlaIII	CATG	7 cut(s)	67, 217, 552, 598, 779, 784, 805
NlaIV	GGNNCC	4 cut(s)	369, 454, 706, 928
NmeAIII	GCCGAG	1 cut(s)	494
NmuCI	GTSAC	4 cut(s)	45, 491, 633, 805
NspI	RCATGY	1 cut(s)	552
PaeI	GCATGC	1 cut(s)	552
PceI	AGGCCT	1 cut(s)	863
PcsI	WCGNNNNNNNCGW	1 cut(s)	521
Pfl23II	CGTACG	1 cut(s)	105
PflMI	CCANNNNNTGG	1 cut(s)	67
PfoI	TCCNGGA	1 cut(s)	657
PinAI	ACCGGT	1 cut(s)	288
PleI	GAGTC	3 cut(s)	48, 488, 736
PpsI	GAGTC	3 cut(s)	48, 488, 736
Ppu21I	YACGTR	1 cut(s)	643
Psp6I	CCWGG	4 cut(s)	408, 438, 446, 930
PspEI	GGTNACC	1 cut(s)	805
PspGI	CCWGG	4 cut(s)	408, 438, 446, 930
PspLI	CGTACG	1 cut(s)	105
PspN4I	GGNNCC	4 cut(s)	369, 454, 706, 928
PspPI	GGNCC	3 cut(s)	271, 741, 772
PstI	CTGCAG	3 cut(s)	306, 483, 606
PstNI	CAGNNNCTG	2 cut(s)	439, 610
PsuI	RGATCY	2 cut(s)	475, 510
RsaI	GTAC	3 cut(s)	17, 107, 182
RsaNI	GTAC	3 cut(s)	16, 106, 181
RseI	CAYNNNNRTG	2 cut(s)	800, 908
SacII	CCGCGG	1 cut(s)	560
Sau3AI	GATC	4 cut(s)	256, 394, 475, 510
Sau96I	GGNCC	3 cut(s)	271, 741, 772
SbfI	CCTGCAGG	1 cut(s)	606
SchI	GAGTC	3 cut(s)	48, 488, 737
ScrFI	CCNGG	5 cut(s)	410, 440, 448, 659, 932
SdaI	CCTGCAGG	1 cut(s)	606
SduI	GDGCHC	1 cut(s)	370
SfaNI	GCATC	1 cut(s)	846
SfcI	CTRYAG	4 cut(s)	302, 431, 479, 602
Sfr303I	CCGCGG	1 cut(s)	560
SgrBI	CCGCGG	1 cut(s)	560
SinI	GGWCC	1 cut(s)	772
SmiMI	CAYNNNNRTG	2 cut(s)	800, 908
SmlI	CTYRAG	3 cut(s)	89, 266, 919
SmoI	CTYRAG	3 cut(s)	89, 266, 919
SphI	GCATGC	1 cut(s)	552
Sse8387I	CCTGCAGG	1 cut(s)	606
Sse9I	AATT	1 cut(s)	750
SseBI	AGGCCT	1 cut(s)	863
StuI	AGGCCT	1 cut(s)	863
StyD4I	CCNGG	5 cut(s)	408, 438, 446, 657, 930
TaaI	ACNGT	3 cut(s)	15, 102, 435
TaiI	ACGT	1 cut(s)	645
TaqI	TCGA	3 cut(s)	249, 699, 723
TasI	AATT	1 cut(s)	750
TauI	GCSGC	5 cut(s)	276, 458, 559, 593, 927
TscAI	CASTG	4 cut(s)	45, 54, 390, 440
TseFI	GTSAC	4 cut(s)	45, 491, 633, 805
Tsp45I	GTSAC	4 cut(s)	45, 491, 633, 805
TspDTI	ATGAA	3 cut(s)	138, 643, 926
TspGWI	ACGGA	2 cut(s)	360, 820
TspRI	CASTG	4 cut(s)	45, 54, 390, 440
Van91I	CCANNNNNTGG	1 cut(s)	67
VpaK11BI	GGWCC	1 cut(s)	772
XceI	RCATGY	1 cut(s)	552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.