Rorug02G0345200

Family of unknown function (DUF716)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0005131
Physical Location & Seq
Forward (+)
43074149 .. 43077380
3232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0345200.1

Sequence Viewer

Length: 2457 bp
ATGTCACTGTCTCGCACCTCGAAAGTTGCTAATGACCAGAAAATGTTTTTGAAAGCTCTGCTTGTCTTCCTCCTCTTTCAGTTCTGCACTTCCAGGGACACCATAAAAGGGAATGAAGAACAACTGAAGGATGTTGATGGAGACTATTTAGTGTCCAAAGAAAGCAAGTTTGAATTGGGTTTCTTCAGCCCTGGAAATTCTAGCTACAGGTATGTTGGAATTTGGTATTCTCAGACTAGAGTATCCAATAAGACAGTGGTGTGGGTTGCAAACAGGAACAGTCCCATAAATGATTCCTCTGGTGTGCTCACAATAAACAGATATGGAGAACTAGTCCTTTATGCTTATAACATGGAGAGCACTCCTATTTGGTCTACTAATGTGTCGCGGTCGGTTCAAAATGTTAACACAAGCACTTTATCTGCACAGCTTTTAGATACAGGAGATTTAGTTGTGTTCCAGGCTGATAATAATGAAATCTATGTATGGCAAAGTTTTGATTATCCTACTGATACTTTAATTCCAGGTATGAAAGTCGGGGTGAATTGGAAAACTGGGCAAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTATACCTTTAGGCTCTATCCATATCAGATCGCATCCCCCGAATTTTTTATGTACAAGGGTTTGAGTAAGTATTACCGAACTGATCCAGGGCGTTGGCCTGGTTTGGTCACTAGTCAAGAGGAAACTTATTATTCCATGAATGAAACCAATGCAATTACAAGATTAACAGTGACTAATTCTGCGTTCGAGCACCTTCATTGGGATGATGATGGCCTTCAATGGAAGTCCCGGTGTGACGGGTATGGAAAGTGTGGTGCCAACAGCAGATGTAGCCCTGACAACGTTAGTGTGTTTGAGTGTGAATGTTTATCAGGGTATGTGCCTAATTCTATAAGTGATTGGAATCAGAAAAATGGGTCAGGTGGATGTGTGAGTAATCGACTTGGTTTGTTGAAGTGTGGAGATGGAGACGGGTTTGTGAAGGTGGCAAGAGTTAAATATCCAGACACATCGATAGCAGCATGGTTAAAATCAGGAATGAGTGCCAAAGAGTGTGAGCAGGAGTGCCTAAGAAATTGTTCTTGCAAAGCATATTTGAGCACTGAAAATGAAGGGATTGTTGATTGCTTGACATGGTATGATGACTTGATGGACATTTTAACGTACACAGAGTTTGGACAAGATCTCTACGTTCGTGTGAATGCAACTGTGTTAGCTGCAAATGCCGGAAGATCACAAGGTTTCTTGGAAAGGAGGGGTATGCCGGCCATTCCAATACTGTCTGCTGTGCTGGCATTGGTACTAATCATTATGCTTCTCTATTGGTGGCGTAAGAAGATCAGGAACACAAAAGGCATAGATTTTGTGGAGGCAGAGGAGCTTGAGGAAAGTCAGAGACACCCCGAATTGCAATTTTTCGATCTTGACACAATAATAGCAGCCACAGACAACTTCTCTCGTGTCAATGAACTTGGCCATGGTGGTTTTGGCTCTGTTTATAAGGGTCAGCTACCAAATGAACAAAAAGTCGCTGTGAAAAGATTGTCCAAAACTTCAGGACAAGGGATTGAGGAATTCAAAAATGAAGTTGCACTTATAGCAAGACTTCAACACAGGAATCTTGTGAAACTTTTAGGCTGTTGTATAAAGGGAGAAGAAAGGATGTTAGTCCTAGAATACATGCCTAACAAAAGCTTGGACTCCTTACTGTTTGATAACAGAAGACGGTCCTTCTTGGATTGGAAAAAGCGCTTTGAAATTATCAACGGGATTGCTCGTGGGATTCTGTATCTTCACCAAGACTCAAGATTGAGGATTATCCATAGAGATCTAAAAACTAGCAATGTTCTACTAGATGATGAGATGAACCCAAAAATTTCTGATTTTGGCATGGCTAGAATATTCGACGGGGACCAACTGCAAGATAAGACGAAACGAATTGTCGGAACATATGGCTACATGTCACCGGAGTACGCAGTATTTGGGAGATTTTCCACGAAATCTGATGTCTTTAGTTTTGGGATCATAATGTTGGAGATTGTAAGTGGGCAAAGAAACAATAGTTCTGATCTGGAGGATCCTTCCGTGAACTTGATAGGACGTGTTTGGGAGCTCTGGAGAGAAGGTAGAGCATTAGATATTGTTGATTCGACACTGAAGTCATGTCAGCCTAATGAAGTCATGAGATGCATACAAGTTGCGCTCTTGTGTGTACAAGAAGATTCAAAGGACCGACCTGCCATGTCAGCCATTGTTATCATGTTGAGTGGTGAAGCATCTCCTCCATTGCCTAAGCAGCCAGCATTTGTTTACAGAAGAGATTCCGGCACTGATGTTGATCCATTATTTCCAAACCGTTCTTCTTCTATAAACGACCTGACAATAACTACAATGGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF716

Protein Analysis

818

Amino Acids

92.63

Weight (kDa)

5.57

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 195 2.6e-35 D-mannose binding lectin
S_locus_glycop PF00954 243 - 313 4.1e-07 S-locus glycoprotein domain
PAN_2 PF08276 337 - 403 2.6e-17 PAN-like domain
Pkinase PF00069 503 - 768 1.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 505 - 770 3.7e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 348, 1551
AasI GACNNNNNNGTC 1 cut(s) 2209
Acc36I ACCTGC 1 cut(s) 2296
AccB1I GGYRCC 1 cut(s) 866
AccI GTMKAC 1 cut(s) 374
AccII CGCG 1 cut(s) 388
AciI CCGC 1 cut(s) 388
AclI AACGTT 1 cut(s) 894
AclWI GGATC 5 cut(s) 689, 2081, 2123, 2136, 2384
AcoI YGGCCR 2 cut(s) 1317, 1525
AcsI RAATTY 5 cut(s) 196, 219, 653, 1625, 1926
AcuI CTGAAG 4 cut(s) 146, 169, 1590, 2228
AfaI GTAC 5 cut(s) 665, 1217, 1353, 2024, 2265
AfeI AGCGCT 1 cut(s) 1802
AfiI CCNNNNNNNGG 3 cut(s) 108, 605, 811
AflIII ACRYGT 2 cut(s) 2010, 2152
AgsI TTSAA 9 cut(s) 52, 173, 398, 830, 1006, 1630, 1661, 1808, 2277
AhlI ACTAGT 2 cut(s) 331, 722
AjiI CACGTC 1 cut(s) 2153
AjnI CCWGG 7 cut(s) 92, 190, 459, 523, 598, 697, 709
AjuI GAANNNNNNNTTGG 2 cut(s) 2395, 2427
AluBI AGCT 9 cut(s) 56, 204, 430, 1268, 1432, 1561, 1746, 2164, 2450
AluI AGCT 9 cut(s) 56, 204, 430, 1268, 1432, 1561, 1746, 2164, 2450
Alw21I GWGCWC 5 cut(s) 309, 362, 804, 1154, 2166
Alw26I GTCTC 4 cut(s) 15, 135, 1014, 1441
AlwI GGATC 5 cut(s) 689, 2081, 2123, 2136, 2384
Aor51HI AGCGCT 1 cut(s) 1802
AoxI GGCC 4 cut(s) 707, 823, 1317, 1525
ApeKI GCWGC 4 cut(s) 1070, 1268, 1490, 2347
ApoI RAATTY 5 cut(s) 196, 219, 653, 1625, 1926
Asp700I GAANNNNTTC 2 cut(s) 1129, 2371
AspLEI GCGC 2 cut(s) 1803, 2254
AspS9I GGNCC 3 cut(s) 1779, 1963, 2281
AsuC2I CCSGG 1 cut(s) 841
AsuHPI GGTGA 4 cut(s) 553, 1838, 2007, 2333
AvaII GGWCC 3 cut(s) 1779, 1963, 2281
BaeI ACNNNNGTAYC 2 cut(s) 225, 258
BalI TGGCCA 1 cut(s) 1527
BamHI GGATCC 1 cut(s) 2128
BanI GGYRCC 1 cut(s) 866
BanII GRGCYC 1 cut(s) 2166
BauI CACGAG 2 cut(s) 1509, 1827
BbsI GAAGAC 2 cut(s) 58, 1780
Bbv12I GWGCWC 5 cut(s) 309, 362, 804, 1154, 2166
BbvI GCAGC 4 cut(s) 1082, 1255, 1502, 2359
BccI CCATC 4 cut(s) 131, 815, 1010, 1195
BciT130I CCWGG 7 cut(s) 94, 192, 461, 525, 600, 699, 711
BciVI GTATCC 1 cut(s) 253
BcnI CCSGG 1 cut(s) 841
BcoDI GTCTC 4 cut(s) 15, 135, 1014, 1441
BcuI ACTAGT 2 cut(s) 331, 722
BfaI CTAG 8 cut(s) 201, 237, 332, 723, 1724, 1890, 1904, 1947
BfmI CTRYAG 1 cut(s) 205
BfoI RGCGCY 1 cut(s) 1804
BfuAI ACCTGC 1 cut(s) 2296
BfuI GTATCC 1 cut(s) 253
BglII AGATCT 2 cut(s) 1234, 1879
BisI GCNGC 4 cut(s) 1071, 1269, 1491, 2348
BlsI GCNGC 4 cut(s) 1072, 1270, 1492, 2349
Bme1390I CCNGG 8 cut(s) 94, 192, 461, 525, 600, 699, 711, 841
Bme18I GGWCC 3 cut(s) 1779, 1963, 2281
BmgBI CACGTC 1 cut(s) 2153
BmgT120I GGNCC 3 cut(s) 1779, 1963, 2281
BmiI GGNNCC 3 cut(s) 868, 1964, 2130
BmrFI CCNGG 8 cut(s) 94, 192, 461, 525, 600, 699, 711, 841
BmrI ACTGGG 2 cut(s) 564, 615
BmsI GCATC 3 cut(s) 653, 2228, 2336
BmuI ACTGGG 2 cut(s) 564, 615
BpiI GAAGAC 2 cut(s) 58, 1780
BpmI CTGGAG 2 cut(s) 2144, 2188
Bpu10I CCTNAGC 1 cut(s) 2343
BpuEI CTTGAG 2 cut(s) 1454, 1840
BpuMI CCSGG 1 cut(s) 841
Bsa29I ATCGAT 1 cut(s) 1064
BsaBI GATNNNNATC 2 cut(s) 954, 2388
BsaJI CCNNGG 5 cut(s) 93, 190, 598, 698, 1528
BsaWI WCCGGW 1 cut(s) 2017
BsaXI ACNNNNNCTCC 6 cut(s) 318, 348, 435, 465, 2161, 2191
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 605, 811
Bse118I RCCGGY 1 cut(s) 1315
Bse1I ACTGG 2 cut(s) 559, 610
Bse3DI GCAATG 2 cut(s) 1900, 2336
Bse8I GATNNNNATC 2 cut(s) 954, 2388
BseBI CCWGG 7 cut(s) 94, 192, 461, 525, 600, 699, 711
BseCI ATCGAT 1 cut(s) 1064
BseDI CCNNGG 5 cut(s) 93, 190, 598, 698, 1528
BseGI GGATG 5 cut(s) 136, 644, 820, 983, 1719
BseJI GATNNNNATC 2 cut(s) 954, 2388
BseLI CCNNNNNNNGG 3 cut(s) 108, 605, 811
BseMI GCAATG 2 cut(s) 1900, 2336
BseMII CTCAG 1 cut(s) 245
BseNI ACTGG 2 cut(s) 559, 610
BseRI GAGGAG 3 cut(s) 62, 1442, 2322
BseXI GCAGC 4 cut(s) 1082, 1255, 1502, 2359
BsgI GTGCAG 2 cut(s) 70, 408
Bsh1236I CGCG 1 cut(s) 388
Bsh1285I CGRYCG 1 cut(s) 392
BshFI GGCC 4 cut(s) 709, 825, 1319, 1527
BshNI GGYRCC 1 cut(s) 866
BshVI ATCGAT 1 cut(s) 1064
BsiEI CGRYCG 1 cut(s) 392
BsiHKAI GWGCWC 5 cut(s) 309, 362, 804, 1154, 2166
BsiSI CCGG 5 cut(s) 841, 1278, 1316, 2018, 2376
BslFI GGGAC 5 cut(s) 110, 267, 623, 823, 1976
BslI CCNNNNNNNGG 3 cut(s) 108, 605, 811
BsmAI GTCTC 4 cut(s) 15, 135, 1014, 1441
BsmBI CGTCTC 1 cut(s) 1014
BsmFI GGGAC 5 cut(s) 110, 267, 623, 823, 1976
BsmI GAATGC 1 cut(s) 1258
BsnI GGCC 4 cut(s) 709, 825, 1319, 1527
Bsp1286I GDGCHC 5 cut(s) 309, 362, 804, 1154, 2166
Bsp1407I TGTACA 2 cut(s) 663, 2263
Bsp19I CCATGG 1 cut(s) 1528
BspACI CCGC 1 cut(s) 388
BspANI GGCC 4 cut(s) 709, 825, 1319, 1527
BspCNI CTCAG 1 cut(s) 244
BspDI ATCGAT 1 cut(s) 1064
BspFNI CGCG 1 cut(s) 388
BspHI TCATGA 1 cut(s) 2232
BspLI GGNNCC 3 cut(s) 868, 1964, 2130
BspMI ACCTGC 1 cut(s) 2296
BspPI GGATC 5 cut(s) 689, 2081, 2123, 2136, 2384
BspT107I GGYRCC 1 cut(s) 866
BsrDI GCAATG 2 cut(s) 1900, 2336
BsrFI RCCGGY 1 cut(s) 1315
BsrGI TGTACA 2 cut(s) 663, 2263
BsrI ACTGG 2 cut(s) 559, 610
BssAI RCCGGY 1 cut(s) 1315
BssECI CCNNGG 5 cut(s) 93, 190, 598, 698, 1528
BssSI CACGAG 2 cut(s) 1509, 1827
BssT1I CCWWGG 1 cut(s) 1528
Bst2BI CACGAG 2 cut(s) 1509, 1827
Bst2UI CCWGG 7 cut(s) 94, 192, 461, 525, 600, 699, 711
Bst4CI ACNGT 9 cut(s) 9, 256, 281, 781, 1261, 1332, 1761, 1779, 2408
Bst6I CTCTTC 1 cut(s) 2362
BstAUI TGTACA 2 cut(s) 663, 2263
BstC8I GCNNGC 3 cut(s) 1317, 1344, 2352
BstDEI CTNAG 3 cut(s) 231, 1121, 2343
BstDSI CCRYGG 1 cut(s) 1528
BstF5I GGATG 5 cut(s) 136, 644, 820, 983, 1719
BstFNI CGCG 1 cut(s) 388
BstH2I RGCGCY 1 cut(s) 1804
BstHHI GCGC 2 cut(s) 1803, 2254
BstMAI GTCTC 4 cut(s) 15, 135, 1014, 1441
BstMCI CGRYCG 1 cut(s) 392
BstMWI GCNNNNNNNGC 6 cut(s) 882, 1274, 1343, 1649, 2297, 2347
BstNI CCWGG 7 cut(s) 94, 192, 461, 525, 600, 699, 711
BstNSI RCATGY 2 cut(s) 1735, 2014
BstSCI CCNGG 8 cut(s) 92, 190, 459, 523, 598, 697, 709, 839
BstSFI CTRYAG 1 cut(s) 205
BstUI CGCG 1 cut(s) 388
BstV1I GCAGC 4 cut(s) 1082, 1255, 1502, 2359
BstV2I GAAGAC 2 cut(s) 58, 1780
BstX2I RGATCY 3 cut(s) 1234, 1879, 2128
BstXI CCANNNNNNTGG 1 cut(s) 705
BstYI RGATCY 3 cut(s) 1234, 1879, 2128
Bsu15I ATCGAT 1 cut(s) 1064
BsuI GTATCC 1 cut(s) 253
BsuRI GGCC 4 cut(s) 709, 825, 1319, 1527
BsuTUI ATCGAT 1 cut(s) 1064
BtgI CCRYGG 1 cut(s) 1528
BtrI CACGTC 1 cut(s) 2153
BtsCI GGATG 5 cut(s) 136, 644, 820, 983, 1719
BtsIMutI CAGTG 6 cut(s) 5, 261, 786, 1152, 2204, 2379
BveI ACCTGC 1 cut(s) 2296
Cac8I GCNNGC 3 cut(s) 1317, 1344, 2352
CciI TCATGA 1 cut(s) 2232
CfoI GCGC 2 cut(s) 1803, 2254
Cfr10I RCCGGY 1 cut(s) 1315
Cfr13I GGNCC 3 cut(s) 1779, 1963, 2281
ClaI ATCGAT 1 cut(s) 1064
Csp6I GTAC 5 cut(s) 664, 1216, 1352, 2023, 2264
CviQI GTAC 5 cut(s) 664, 1216, 1352, 2023, 2264
DdeI CTNAG 3 cut(s) 231, 1121, 2343
DrdI GACNNNNNNGTC 1 cut(s) 2209
DseDI GACNNNNNNGTC 1 cut(s) 2209
EaeI YGGCCR 2 cut(s) 1317, 1525
Eam1104I CTCTTC 1 cut(s) 2362
EarI CTCTTC 1 cut(s) 2362
Ecl136II GAGCTC 1 cut(s) 2164
Eco130I CCWWGG 1 cut(s) 1528
Eco24I GRGCYC 1 cut(s) 2166
Eco47I GGWCC 3 cut(s) 1779, 1963, 2281
Eco47III AGCGCT 1 cut(s) 1802
Eco53kI GAGCTC 1 cut(s) 2164
Eco57I CTGAAG 4 cut(s) 146, 169, 1590, 2228
EcoICRI GAGCTC 1 cut(s) 2164
EcoRI GAATTC 1 cut(s) 1625
EcoRII CCWGG 7 cut(s) 92, 190, 459, 523, 598, 697, 709
EcoT14I CCWWGG 1 cut(s) 1528
EcoT22I ATGCAT 1 cut(s) 2243
EcoT38I GRGCYC 1 cut(s) 2166
ErhI CCWWGG 1 cut(s) 1528
Esp3I CGTCTC 1 cut(s) 1014
FalI AAGNNNNNCTT 4 cut(s) 45, 77, 1629, 1661
FaqI GGGAC 5 cut(s) 110, 267, 623, 823, 1976
FauNDI CATATG 1 cut(s) 2002
FblI GTMKAC 1 cut(s) 374
Fnu4HI GCNGC 4 cut(s) 1071, 1269, 1491, 2348
FokI GGATG 5 cut(s) 143, 631, 827, 990, 1726
FriOI GRGCYC 1 cut(s) 2166
Fsp4HI GCNGC 4 cut(s) 1071, 1269, 1491, 2348
FspBI CTAG 8 cut(s) 201, 237, 332, 723, 1724, 1890, 1904, 1947
GlaI GCGC 2 cut(s) 1802, 2253
GluI GCNGC 4 cut(s) 1071, 1269, 1491, 2348
GsuI CTGGAG 2 cut(s) 2144, 2188
HaeII RGCGCY 1 cut(s) 1804
HaeIII GGCC 4 cut(s) 709, 825, 1319, 1527
HapII CCGG 5 cut(s) 841, 1278, 1316, 2018, 2376
HhaI GCGC 2 cut(s) 1803, 2254
Hin6I GCGC 2 cut(s) 1801, 2252
HinP1I GCGC 2 cut(s) 1801, 2252
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 1744
HinfI GANTC 9 cut(s) 293, 955, 1669, 1751, 1834, 1853, 2198, 2273, 2372
HpaI GTTAAC 1 cut(s) 406
HpaII CCGG 5 cut(s) 841, 1278, 1316, 2018, 2376
HphI GGTGA 4 cut(s) 553, 1838, 2007, 2333
Hpy166II GTNNAC 6 cut(s) 375, 406, 1218, 2140, 2264, 2362
Hpy188I TCNGA 8 cut(s) 234, 639, 960, 1446, 1933, 1997, 2056, 2119
Hpy8I GTNNAC 6 cut(s) 375, 406, 1218, 2140, 2264, 2362
Hpy99I CGWCG 1 cut(s) 1961
HpyAV CCTTC 8 cut(s) 121, 815, 836, 1027, 1157, 1792, 2142, 2168
HpyCH4III ACNGT 9 cut(s) 9, 256, 281, 781, 1261, 1332, 1761, 1779, 2408
HpyCH4IV ACGT 4 cut(s) 894, 1214, 1242, 2152
HpyF10VI GCNNNNNNNGC 6 cut(s) 882, 1274, 1343, 1649, 2297, 2347
HpyF3I CTNAG 3 cut(s) 231, 1121, 2343
HpySE526I ACGT 4 cut(s) 894, 1214, 1242, 2152
HspAI GCGC 2 cut(s) 1801, 2252
KroI GCCGGC 1 cut(s) 1315
KroNI GCCGGC 1 cut(s) 1317
KspAI GTTAAC 1 cut(s) 406
LmnI GCTCC 2 cut(s) 1429, 2161
Lsp1109I GCAGC 4 cut(s) 1082, 1255, 1502, 2359
LweI GCATC 3 cut(s) 653, 2228, 2336
MaeI CTAG 8 cut(s) 201, 237, 332, 723, 1724, 1890, 1904, 1947
MaeII ACGT 4 cut(s) 894, 1214, 1242, 2152
MaeIII GTNAC 6 cut(s) 3, 585, 718, 781, 845, 2013
MflI RGATCY 3 cut(s) 1234, 1879, 2128
MhlI GDGCHC 5 cut(s) 309, 362, 804, 1154, 2166
MlsI TGGCCA 1 cut(s) 1527
MluNI TGGCCA 1 cut(s) 1527
MlyI GAGTC 2 cut(s) 1745, 1847
MmeI TCCRAC 3 cut(s) 196, 1975, 2064
Mox20I TGGCCA 1 cut(s) 1527
Mph1103I ATGCAT 1 cut(s) 2243
MroNI GCCGGC 1 cut(s) 1315
MroXI GAANNNNTTC 2 cut(s) 1129, 2371
MscI TGGCCA 1 cut(s) 1527
MseI TTAA 7 cut(s) 405, 518, 572, 776, 1047, 1079, 1211
MslI CAYNNNNRTG 1 cut(s) 813
Msp20I TGGCCA 1 cut(s) 1527
MspI CCGG 5 cut(s) 841, 1278, 1316, 2018, 2376
MspR9I CCNGG 8 cut(s) 94, 192, 461, 525, 600, 699, 711, 841
Mva1269I GAATGC 1 cut(s) 1258
MvaI CCWGG 7 cut(s) 94, 192, 461, 525, 600, 699, 711
MvnI CGCG 1 cut(s) 388
MwoI GCNNNNNNNGC 6 cut(s) 882, 1274, 1343, 1649, 2297, 2347
NaeI GCCGGC 1 cut(s) 1317
NciI CCSGG 1 cut(s) 841
NcoI CCATGG 1 cut(s) 1528
NdeI CATATG 1 cut(s) 2002
NgoMIV GCCGGC 1 cut(s) 1315
NlaIV GGNNCC 3 cut(s) 868, 1964, 2130
NmuCI GTSAC 6 cut(s) 3, 585, 718, 781, 845, 2013
NsiI ATGCAT 1 cut(s) 2243
NspI RCATGY 2 cut(s) 1735, 2014
PagI TCATGA 1 cut(s) 2232
PciI ACATGT 1 cut(s) 2010
PcsI WCGNNNNNNNCGW 1 cut(s) 648
PctI GAATGC 1 cut(s) 1258
PdiI GCCGGC 1 cut(s) 1317
PdmI GAANNNNTTC 2 cut(s) 1129, 2371
PfeI GAWTC 7 cut(s) 293, 955, 1669, 1834, 2198, 2273, 2372
PkrI GCNGC 4 cut(s) 1072, 1270, 1492, 2349
PleI GAGTC 2 cut(s) 1745, 1847
PpsI GAGTC 2 cut(s) 1745, 1847
PscI ACATGT 1 cut(s) 2010
PsiI TTATAA 2 cut(s) 348, 1551
Psp124BI GAGCTC 1 cut(s) 2166
Psp1406I AACGTT 1 cut(s) 894
Psp6I CCWGG 7 cut(s) 92, 190, 459, 523, 598, 697, 709
PspGI CCWGG 7 cut(s) 92, 190, 459, 523, 598, 697, 709
PspN4I GGNNCC 3 cut(s) 868, 1964, 2130
PspPI GGNCC 3 cut(s) 1779, 1963, 2281
PsuI RGATCY 3 cut(s) 1234, 1879, 2128
RsaI GTAC 5 cut(s) 665, 1217, 1353, 2024, 2265
RsaNI GTAC 5 cut(s) 664, 1216, 1352, 2023, 2264
RseI CAYNNNNRTG 1 cut(s) 813
SacI GAGCTC 1 cut(s) 2166
SaqAI TTAA 7 cut(s) 405, 518, 572, 776, 1047, 1079, 1211
SatI GCNGC 4 cut(s) 1071, 1269, 1491, 2348
Sau96I GGNCC 3 cut(s) 1779, 1963, 2281
SchI GAGTC 2 cut(s) 1745, 1847
ScrFI CCNGG 8 cut(s) 94, 192, 461, 525, 600, 699, 711, 841
SduI GDGCHC 5 cut(s) 309, 362, 804, 1154, 2166
SfaNI GCATC 3 cut(s) 653, 2228, 2336
SfcI CTRYAG 1 cut(s) 205
SinI GGWCC 3 cut(s) 1779, 1963, 2281
SmiMI CAYNNNNRTG 1 cut(s) 813
SmlI CTYRAG 2 cut(s) 1433, 1855
SmoI CTYRAG 2 cut(s) 1433, 1855
SpeI ACTAGT 2 cut(s) 331, 722
SsiI CCGC 1 cut(s) 388
SspI AATATT 1 cut(s) 1953
SspMI CTAG 8 cut(s) 201, 237, 332, 723, 1724, 1890, 1904, 1947
SstI GAGCTC 1 cut(s) 2166
StyD4I CCNGG 8 cut(s) 92, 190, 459, 523, 598, 697, 709, 839
StyI CCWWGG 1 cut(s) 1528
TaaI ACNGT 9 cut(s) 9, 256, 281, 781, 1261, 1332, 1761, 1779, 2408
TaiI ACGT 4 cut(s) 897, 1217, 1245, 2155
TaqI TCGA 8 cut(s) 20, 798, 991, 1064, 1470, 1956, 2201, 2452
TaqII GACCGA 1 cut(s) 2298
TatI WGTACW 2 cut(s) 663, 2263
TfiI GAWTC 7 cut(s) 293, 955, 1669, 1834, 2198, 2273, 2372
Tru1I TTAA 7 cut(s) 405, 518, 572, 776, 1047, 1079, 1211
Tru9I TTAA 7 cut(s) 405, 518, 572, 776, 1047, 1079, 1211
TscAI CASTG 6 cut(s) 12, 261, 786, 1159, 2211, 2386
TseFI GTSAC 6 cut(s) 3, 585, 718, 781, 845, 2013
TseI GCWGC 4 cut(s) 1070, 1268, 1490, 2347
Tsp45I GTSAC 6 cut(s) 3, 585, 718, 781, 845, 2013
TspGWI ACGGA 1 cut(s) 2125
TspRI CASTG 6 cut(s) 12, 261, 786, 1159, 2211, 2386
VpaK11BI GGWCC 3 cut(s) 1779, 1963, 2281
XapI RAATTY 5 cut(s) 196, 219, 653, 1625, 1926
XceI RCATGY 2 cut(s) 1735, 2014
XcmI CCANNNNNNNNNTGG 2 cut(s) 253, 1535
XmiI GTMKAC 1 cut(s) 374
XmnI GAANNNNTTC 2 cut(s) 1129, 2371
XspI CTAG 8 cut(s) 201, 237, 332, 723, 1724, 1890, 1904, 1947
Zsp2I ATGCAT 1 cut(s) 2243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.