Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007194

Physical Location & Seq

Genomic Coordinates Reverse (-)

1723916 .. 1728432

Gene Structure 4517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G012800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 561 bp

ATGCATAAGAATAAGGGAAGAAACAAAGGGAGACCCTTTACGAGACAAAAGGATAGGAAGGACCAAAACATGGTCACTGATAACCAAGAAATTGCCACCGAGATCCAAAAAATGGACATGAGGAAGATTTCGAAACAGATTGAGCTTTTGGGTTCTTCTCATATGACATGGAAGCAAAGGAAGGAGTTGGAGAATAGGAAAGTGATTTCTCTAGGAGGAAAGCCTCCAAAGAAGCAGAGACTTCCTCTAAGTATAGCAAGAGTGGTAATGAAGAATCAAAAGGAAAGGGAGAAAAAAATGCTTGAACAGAATATGGTTCTTGGACGTTTTGGTGGCAATTTCAGTGGTGGTTCTAAAAGATCAATGGAGAAGCAAAGGCCTGAGAACAGGGTTCTGAAAGCGAGTGAAGGTCGCTTTAGAAATGGTGTACTTGATGTGAAGCATTTGTTACATGCAACTCCATCTAGAGACCGCAGCTCTGGTGGCCATGTGTTCAGAGAGAACAAGAAGGGAAATGGAAAGCAGAACAAAGGTAAGAAGAAGATCAGTATGGGCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4602

Protein Analysis

187

Amino Acids

21.43

Weight (kDa)

11.1

Isoelectric Point (pI)

47.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007194)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44820 AT2G44820
fragaria_vesca	FvH4_3g25170 FvH4_3g25170 FvH4_3g25170 FvH4_3g25170 FvH4_3g25170
malus_domestica	MD12G1010900.v1.1
prunus_persica	Prupe.4G268800_v2.0.a1 Prupe.4G268800_v2.0.a1 Prupe.7G012800_v2.0.a1
pyrus_communis	pycom12g00840
rosa_chinensis	RchiOBHm_Chr5g0046151
rosa_laevigata	RLG00000034379
rosa_multiflora	Rmu_sc0001035.1_g000060 Rmu_sc0001035.1_g000070 Rmu_sc0007758.1_g000004
rosa_roxburghii	Rroxscaffold_1G00035420
rosa_rugosa	Rorug05G0225000 Rorug05G0225100
rosa_samantha	Rh5AG306300 Rh5BG314400 Rh5CG340900 Rh5DG324700
rosa_wichuraiana	Rw5G028620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	70, 112
AciI	CCGC	1 cut(s)	472
AclWI	GGATC	1 cut(s)	97
AcoI	YGGCCR	1 cut(s)	484
AfaI	GTAC	1 cut(s)	429
AfiI	CCNNNNNNNGG	2 cut(s)	70, 112
AgsI	TTSAA	1 cut(s)	305
AluBI	AGCT	2 cut(s)	145, 477
AluI	AGCT	2 cut(s)	145, 477
Alw26I	GTCTC	4 cut(s)	25, 37, 232, 462
AlwI	GGATC	1 cut(s)	97
AoxI	GGCC	3 cut(s)	377, 484, 553
ApaI	GGGCCC	1 cut(s)	557
ApeKI	GCWGC	1 cut(s)	474
AspS9I	GGNCC	3 cut(s)	61, 553, 554
AsuII	TTCGAA	1 cut(s)	131
AvaII	GGWCC	1 cut(s)	61
BaeGI	GKGCMC	1 cut(s)	557
BalI	TGGCCA	1 cut(s)	486
BanII	GRGCYC	1 cut(s)	557
BbvI	GCAGC	1 cut(s)	486
BccI	CCATC	1 cut(s)	469
BcoDI	GTCTC	4 cut(s)	25, 37, 232, 462
BfaI	CTAG	2 cut(s)	212, 465
BisI	GCNGC	1 cut(s)	475
BlsI	GCNGC	1 cut(s)	476
Bme18I	GGWCC	1 cut(s)	61
BmgT120I	GGNCC	3 cut(s)	61, 553, 554
BmiI	GGNNCC	1 cut(s)	555
BplI	GAGNNNNNCTC	2 cut(s)	229, 261
Bpu14I	TTCGAA	1 cut(s)	131
BsaI	GGTCTC	2 cut(s)	25, 462
Bsc4I	CCNNNNNNNGG	2 cut(s)	70, 112
BseLI	CCNNNNNNNGG	2 cut(s)	70, 112
BseMII	CTCAG	1 cut(s)	372
BseSI	GKGCMC	1 cut(s)	557
BseXI	GCAGC	1 cut(s)	486
BshFI	GGCC	3 cut(s)	379, 486, 555
BslI	CCNNNNNNNGG	2 cut(s)	70, 112
BsmAI	GTCTC	4 cut(s)	25, 37, 232, 462
BsnI	GGCC	3 cut(s)	379, 486, 555
Bso31I	GGTCTC	2 cut(s)	25, 462
Bsp119I	TTCGAA	1 cut(s)	131
Bsp120I	GGGCCC	1 cut(s)	553
Bsp1286I	GDGCHC	1 cut(s)	557
Bsp143I	GATC	3 cut(s)	102, 359, 543
BspACI	CCGC	1 cut(s)	472
BspANI	GGCC	3 cut(s)	379, 486, 555
BspCNI	CTCAG	1 cut(s)	373
BspLI	GGNNCC	1 cut(s)	555
BspPI	GGATC	1 cut(s)	97
BspT104I	TTCGAA	1 cut(s)	131
BspTNI	GGTCTC	2 cut(s)	25, 462
BssMI	GATC	3 cut(s)	102, 359, 543
BstBI	TTCGAA	1 cut(s)	131
BstDEI	CTNAG	2 cut(s)	248, 381
BstKTI	GATC	3 cut(s)	105, 362, 546
BstMAI	GTCTC	4 cut(s)	25, 37, 232, 462
BstMBI	GATC	3 cut(s)	102, 359, 543
BstMWI	GCNNNNNNNGC	1 cut(s)	483
BstNSI	RCATGY	1 cut(s)	455
BstSLI	GKGCMC	1 cut(s)	557
BstV1I	GCAGC	1 cut(s)	486
BstX2I	RGATCY	1 cut(s)	102
BstYI	RGATCY	1 cut(s)	102
BsuRI	GGCC	3 cut(s)	379, 486, 555
BtsIMutI	CAGTG	2 cut(s)	75, 349
Cfr13I	GGNCC	3 cut(s)	61, 553, 554
Csp6I	GTAC	1 cut(s)	428
CspCI	CAANNNNNGTGG	2 cut(s)	325, 360
CviAII	CATG	5 cut(s)	70, 118, 168, 452, 488
CviJI	RGCY	6 cut(s)	145, 223, 379, 477, 486, 555
CviKI_1	RGCY	6 cut(s)	145, 223, 379, 477, 486, 555
CviQI	GTAC	1 cut(s)	428
DdeI	CTNAG	2 cut(s)	248, 381
DpnI	GATC	3 cut(s)	104, 361, 545
DpnII	GATC	3 cut(s)	102, 359, 543
EaeI	YGGCCR	1 cut(s)	484
Eco147I	AGGCCT	1 cut(s)	379
Eco24I	GRGCYC	1 cut(s)	557
Eco31I	GGTCTC	2 cut(s)	25, 462
Eco47I	GGWCC	1 cut(s)	61
EcoO109I	RGGNCCY	1 cut(s)	554
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	557
FaeI	CATG	5 cut(s)	73, 121, 171, 455, 491
FatI	CATG	5 cut(s)	69, 117, 167, 451, 487
FauNDI	CATATG	1 cut(s)	162
Fnu4HI	GCNGC	1 cut(s)	475
FriOI	GRGCYC	1 cut(s)	557
Fsp4HI	GCNGC	1 cut(s)	475
FspBI	CTAG	2 cut(s)	212, 465
GluI	GCNGC	1 cut(s)	475
HaeIII	GGCC	3 cut(s)	379, 486, 555
Hin1II	CATG	5 cut(s)	73, 121, 171, 455, 491
HinfI	GANTC	1 cut(s)	274
Hpy166II	GTNNAC	1 cut(s)	428
Hpy188I	TCNGA	2 cut(s)	396, 497
Hpy188III	TCNNGA	1 cut(s)	465
Hpy8I	GTNNAC	1 cut(s)	428
HpyAV	CCTTC	4 cut(s)	52, 175, 401, 502
HpyCH4IV	ACGT	1 cut(s)	325
HpyCH4V	TGCA	2 cut(s)	4, 455
HpyF10VI	GCNNNNNNNGC	1 cut(s)	483
HpyF3I	CTNAG	2 cut(s)	248, 381
HpySE526I	ACGT	1 cut(s)	325
Hsp92II	CATG	5 cut(s)	73, 121, 171, 455, 491
Kzo9I	GATC	3 cut(s)	102, 359, 543
LpnPI	CCDG	3 cut(s)	373, 393, 465
Lsp1109I	GCAGC	1 cut(s)	486
MaeI	CTAG	2 cut(s)	212, 465
MaeII	ACGT	1 cut(s)	325
MaeIII	GTNAC	2 cut(s)	73, 447
MalI	GATC	3 cut(s)	104, 361, 545
MboI	GATC	3 cut(s)	102, 359, 543
MboII	GAAGA	6 cut(s)	30, 136, 147, 283, 550, 553
MflI	RGATCY	1 cut(s)	102
MhlI	GDGCHC	1 cut(s)	557
MlsI	TGGCCA	1 cut(s)	486
MluCI	AATT	2 cut(s)	90, 337
MluNI	TGGCCA	1 cut(s)	486
MmeI	TCCRAC	1 cut(s)	168
MnlI	CCTC	4 cut(s)	114, 209, 234, 255
Mox20I	TGGCCA	1 cut(s)	486
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	1 cut(s)	486
Msp20I	TGGCCA	1 cut(s)	486
MwoI	GCNNNNNNNGC	1 cut(s)	483
NdeI	CATATG	1 cut(s)	162
NdeII	GATC	3 cut(s)	102, 359, 543
NlaIII	CATG	5 cut(s)	73, 121, 171, 455, 491
NlaIV	GGNNCC	1 cut(s)	555
NmuCI	GTSAC	1 cut(s)	73
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	455
NspV	TTCGAA	1 cut(s)	131
PceI	AGGCCT	1 cut(s)	379
PfeI	GAWTC	1 cut(s)	274
PflMI	CCANNNNNTGG	2 cut(s)	70, 112
PkrI	GCNGC	1 cut(s)	476
PspN4I	GGNNCC	1 cut(s)	555
PspOMI	GGGCCC	1 cut(s)	553
PspPI	GGNCC	3 cut(s)	61, 553, 554
PsuI	RGATCY	1 cut(s)	102
RsaI	GTAC	1 cut(s)	429
RsaNI	GTAC	1 cut(s)	428
SatI	GCNGC	1 cut(s)	475
Sau3AI	GATC	3 cut(s)	102, 359, 543
Sau96I	GGNCC	3 cut(s)	61, 553, 554
SduI	GDGCHC	1 cut(s)	557
SetI	ASST	5 cut(s)	147, 328, 412, 479, 535
SfuI	TTCGAA	1 cut(s)	131
SinI	GGWCC	1 cut(s)	61
Sse9I	AATT	2 cut(s)	90, 337
SseBI	AGGCCT	1 cut(s)	379
SsiI	CCGC	1 cut(s)	472
SspMI	CTAG	2 cut(s)	212, 465
StuI	AGGCCT	1 cut(s)	379
TaiI	ACGT	1 cut(s)	328
TaqI	TCGA	1 cut(s)	131
TasI	AATT	2 cut(s)	90, 337
TatI	WGTACW	1 cut(s)	427
TfiI	GAWTC	1 cut(s)	274
TscAI	CASTG	2 cut(s)	82, 349
TseFI	GTSAC	1 cut(s)	73
TseI	GCWGC	1 cut(s)	474
Tsp45I	GTSAC	1 cut(s)	73
TspDTI	ATGAA	1 cut(s)	284
TspRI	CASTG	2 cut(s)	82, 349
Van91I	CCANNNNNTGG	2 cut(s)	70, 112
VpaK11BI	GGWCC	1 cut(s)	61
XbaI	TCTAGA	1 cut(s)	464
XceI	RCATGY	1 cut(s)	455
XspI	CTAG	2 cut(s)	212, 465
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.