Prupe.7G017500_v2.0.a1

Serine hydrolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0011279
Physical Location & Seq
Forward (+)
2567715 .. 2569621
1907 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G017500.1

Sequence Viewer

Length: 1281 bp
ATGTCTCCTCCAATTTTCTCTGAAAATTGGAGAAAGCCGATAACAATTCTCATCTCTGCCTTGAGTTTCGTTGTCTTCCTCATCCTTGACTTTCTTGACAACTTTCTCTGCATCCTGTATAGATATATTGATGAGCTTTTTGAAGGGCAGGCCTCCTCTTGTTACTGTGCAAGCAAGGAAGAGCAGGTGAGGAATGTGGGTGGTCATGGAGAAGGTGAGCTTTCAGAGACTCTATATCAGAGGAAAAATGCTTTCAGGGAAATGGGTTTTCTTGGATTTGCCAAAAAATCCAGGAAAATTGGTGGCGGAGCAGTTGTCAATAGGTGGTCTGATTGTGGATGTGAGTCTTGTCTTTCATGGATGAATGATTGTGATCAGAAGCTTCACTTTGTTGTTAGGGAGCCCTCGCAAGCCATCACTGATCAGGATTGCAGAGGAAAGCCAGTCGAGAATGTGATATTCTTGCATGGGTTTCTTTCTTCTTCCTCATTTTGGACAGAAACAGTGTTTCCAAATCTTTCTGAACGTGTGAACCGTAATTATAGATTGTTTGCTATCGACCTCTTGGGATTTGGAAGAAGCCCAAAGCCAAGGGACTGTATGTATACTTTGAAGGATCATTTGGAAATGATTGAGAAGTCTGTGATCTGTCCATTTCAGTTGGATTCTTTCCACTTGGTTGCACATTCCATGGGTTGTTTAATAGCAATTGCATTAGCTGCTAAGAACTCAAAATTAATAAAATCAATCACTCTTGTAGCACCTCCTTACATCCCTTCTAAAGATGGAGATAGCTTAAGAGTACTTGAAAAACTTGCCGGAAGGAAACTGTGGCCACCGTTCCTGTTTGGAACATCATTTATGTCGTGGTACGAACACCTAGGTCGATGTGTCTGCTTTCTTGTATGCCGGAATCACAGGATGTGGGAGAGGATTGTGAAGCTACTCACTCGGAGAAGGGATCTTCATTTTATGATTATGGACTTGACTAGACACACCCATCACTCAGCTTGGCACACCATGCACAATGTGATATGTGGAGGAGCAAAGTTAATGGATGGTTACTTGCAAGTTTTGAGCAAAGCTGGGGTTAAAGTTGTTGTGATCCATGGTGATAAAGACAATGTTGTCCCTCTGGAGTGCAGCAACAACATTCAGATGGTAGTTCCTAATGCAGAGGTTACCATCATTAAAAATGCAGATCACAGTTCTGTGCTGCTTGGTAGAGAGAGAGATTTTACTCGGCGTCTAGAGCGTATTTGGGAATCGATCGCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0010224 GO:0050896
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1

Protein Analysis

427

Amino Acids

48.67

Weight (kDa)

8.6

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011279)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17720 AT5G17780 AT5G17780
fragaria_vesca FvH4_2g19930 FvH4_2g19930 FvH4_2g19930
malus_domestica MD12G1013100.v1.1
prunus_persica Prupe.7G017500_v2.0.a1
pyrus_communis pycom12g01040
rosa_chinensis RchiOBHm_Chr3g0495891
rosa_laevigata RLG00000022582
rosa_multiflora Rmu_sc0012596.1_g000001
rosa_roxburghii Rroxscaffold_6G00389940
rosa_rugosa Rorug03G0276800
rosa_samantha Rh3AG324600 Rh3BG360600 Rh3BG360700 Rh3CG356800 Rh3DG359800
rosa_wichuraiana Rw3G028360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 175
AasI GACNNNNNNGTC 1 cut(s) 1127
Acc36I ACCTGC 1 cut(s) 175
AccI GTMKAC 1 cut(s) 605
AciI CCGC 1 cut(s) 306
AclWI GGATC 3 cut(s) 624, 969, 1099
AcoI YGGCCR 1 cut(s) 833
AcyI GRCGYC 1 cut(s) 1246
AdeI CACNNNGTG 1 cut(s) 1030
AfaI GTAC 2 cut(s) 804, 872
AfiI CCNNNNNNNGG 1 cut(s) 492
AflII CTTAAG 1 cut(s) 796
AflIII ACRYGT 1 cut(s) 526
AgsI TTSAA 3 cut(s) 143, 613, 809
AjnI CCWGG 1 cut(s) 290
AjuI GAANNNNNNNTTGG 2 cut(s) 605, 637
AluBI AGCT 8 cut(s) 136, 220, 382, 719, 795, 943, 1010, 1085
AluI AGCT 8 cut(s) 136, 220, 382, 719, 795, 943, 1010, 1085
Alw26I GTCTC 2 cut(s) 9, 221
AlwI GGATC 3 cut(s) 624, 969, 1099
AoxI GGCC 2 cut(s) 150, 833
ApeKI GCWGC 3 cut(s) 719, 1143, 1216
AseI ATTAAT 1 cut(s) 737
AspA2I CCTAGG 1 cut(s) 880
AsuHPI GGTGA 3 cut(s) 199, 227, 1124
AvrII CCTAGG 1 cut(s) 880
BalI TGGCCA 1 cut(s) 835
BanII GRGCYC 1 cut(s) 405
BbsI GAAGAC 1 cut(s) 67
BbvI GCAGC 3 cut(s) 706, 1155, 1203
BccI CCATC 6 cut(s) 422, 779, 1008, 1052, 1153, 1193
BcgI CGANNNNNNTGC 2 cut(s) 876, 910
BciT130I CCWGG 1 cut(s) 292
BclI TGATCA 2 cut(s) 373, 421
BcoDI GTCTC 2 cut(s) 9, 221
BfaI CTAG 3 cut(s) 881, 990, 1250
BfrI CTTAAG 1 cut(s) 796
BfuAI ACCTGC 1 cut(s) 175
BisI GCNGC 3 cut(s) 720, 1144, 1217
BlnI CCTAGG 1 cut(s) 880
BlsI GCNGC 3 cut(s) 721, 1145, 1218
BmcAI AGTACT 1 cut(s) 804
Bme1390I CCNGG 1 cut(s) 292
BmiI GGNNCC 1 cut(s) 402
BmrFI CCNGG 1 cut(s) 292
BmsI GCATC 1 cut(s) 120
BpiI GAAGAC 1 cut(s) 67
BpmI CTGGAG 1 cut(s) 1157
BpuEI CTTGAG 1 cut(s) 82
Bsa29I ATCGAT 1 cut(s) 1268
BsaBI GATNNNNATC 1 cut(s) 372
BsaHI GRCGYC 1 cut(s) 1246
BsaJI CCNNGG 4 cut(s) 590, 690, 880, 1108
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bsc4I CCNNNNNNNGG 1 cut(s) 492
Bse1I ACTGG 1 cut(s) 443
Bse8I GATNNNNATC 1 cut(s) 372
BseBI CCWGG 1 cut(s) 292
BseCI ATCGAT 1 cut(s) 1268
BseDI CCNNGG 4 cut(s) 590, 690, 880, 1108
BseGI GGATG 7 cut(s) 81, 111, 344, 366, 771, 927, 1063
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 1 cut(s) 492
BseMII CTCAG 1 cut(s) 1020
BseNI ACTGG 1 cut(s) 443
BseRI GAGGAG 2 cut(s) 145, 1056
BseXI GCAGC 3 cut(s) 706, 1155, 1203
BseYI CCCAGC 1 cut(s) 1085
BsgI GTGCAG 1 cut(s) 1162
Bsh1285I CGRYCG 1 cut(s) 1272
BshFI GGCC 2 cut(s) 152, 835
BshVI ATCGAT 1 cut(s) 1268
BsiEI CGRYCG 1 cut(s) 1272
BsiSI CCGG 2 cut(s) 819, 910
BslFI GGGAC 2 cut(s) 608, 1115
BslI CCNNNNNNNGG 1 cut(s) 492
BsmAI GTCTC 2 cut(s) 9, 221
BsmFI GGGAC 2 cut(s) 608, 1115
BsnI GGCC 2 cut(s) 152, 835
Bsp1286I GDGCHC 1 cut(s) 405
Bsp143I GATC 8 cut(s) 373, 421, 616, 645, 961, 1104, 1201, 1269
Bsp19I CCATGG 2 cut(s) 690, 1108
BspACI CCGC 1 cut(s) 306
BspANI GGCC 2 cut(s) 152, 835
BspCNI CTCAG 1 cut(s) 1019
BspDI ATCGAT 1 cut(s) 1268
BspLI GGNNCC 1 cut(s) 402
BspMI ACCTGC 1 cut(s) 175
BspPI GGATC 3 cut(s) 624, 969, 1099
BspQI GCTCTTC 1 cut(s) 174
BspTI CTTAAG 1 cut(s) 796
BsrI ACTGG 1 cut(s) 443
BssECI CCNNGG 4 cut(s) 590, 690, 880, 1108
BssMI GATC 8 cut(s) 373, 421, 616, 645, 961, 1104, 1201, 1269
BssNAI GTATAC 1 cut(s) 606
BssNI GRCGYC 1 cut(s) 1246
BssT1I CCWWGG 4 cut(s) 590, 690, 880, 1108
Bst1107I GTATAC 1 cut(s) 606
Bst2UI CCWGG 1 cut(s) 292
Bst4CI ACNGT 7 cut(s) 167, 505, 536, 599, 831, 840, 1208
Bst6I CTCTTC 1 cut(s) 174
BstACI GRCGYC 1 cut(s) 1246
BstAFI CTTAAG 1 cut(s) 796
BstAPI GCANNNNNTGC 2 cut(s) 719, 1021
BstC8I GCNNGC 4 cut(s) 150, 172, 411, 1276
BstDEI CTNAG 2 cut(s) 723, 1006
BstDSI CCRYGG 2 cut(s) 690, 1108
BstEII GGTNACC 1 cut(s) 1180
BstF5I GGATG 7 cut(s) 81, 111, 344, 366, 771, 927, 1063
BstKTI GATC 8 cut(s) 376, 424, 619, 648, 964, 1107, 1204, 1272
BstMAI GTCTC 2 cut(s) 9, 221
BstMBI GATC 8 cut(s) 373, 421, 616, 645, 961, 1104, 1201, 1269
BstMCI CGRYCG 1 cut(s) 1272
BstMWI GCNNNNNNNGC 3 cut(s) 719, 1021, 1252
BstNI CCWGG 1 cut(s) 292
BstPI GGTNACC 1 cut(s) 1180
BstSCI CCNGG 1 cut(s) 290
BstV1I GCAGC 3 cut(s) 706, 1155, 1203
BstV2I GAAGAC 1 cut(s) 67
BstX2I RGATCY 1 cut(s) 961
BstYI RGATCY 1 cut(s) 961
BstZ17I GTATAC 1 cut(s) 606
Bsu15I ATCGAT 1 cut(s) 1268
BsuRI GGCC 2 cut(s) 152, 835
BsuTUI ATCGAT 1 cut(s) 1268
BtgI CCRYGG 2 cut(s) 690, 1108
BtsCI GGATG 7 cut(s) 81, 111, 344, 366, 771, 927, 1063
BtsIMutI CAGTG 2 cut(s) 417, 510
BveI ACCTGC 1 cut(s) 175
Cac8I GCNNGC 4 cut(s) 150, 172, 411, 1276
ClaI ATCGAT 1 cut(s) 1268
CseI GACGC 1 cut(s) 1235
Csp6I GTAC 2 cut(s) 803, 871
CviAII CATG 6 cut(s) 206, 357, 467, 691, 1021, 1109
CviQI GTAC 2 cut(s) 803, 871
DdeI CTNAG 2 cut(s) 723, 1006
DpnI GATC 8 cut(s) 375, 423, 618, 647, 963, 1106, 1203, 1271
DpnII GATC 8 cut(s) 373, 421, 616, 645, 961, 1104, 1201, 1269
DraIII CACNNNGTG 1 cut(s) 1030
DrdI GACNNNNNNGTC 1 cut(s) 1127
DseDI GACNNNNNNGTC 1 cut(s) 1127
EaeI YGGCCR 1 cut(s) 833
Eam1104I CTCTTC 1 cut(s) 174
EarI CTCTTC 1 cut(s) 174
EciI GGCGGA 1 cut(s) 321
Eco130I CCWWGG 4 cut(s) 590, 690, 880, 1108
Eco147I AGGCCT 1 cut(s) 152
Eco24I GRGCYC 1 cut(s) 405
Eco91I GGTNACC 1 cut(s) 1180
EcoO65I GGTNACC 1 cut(s) 1180
EcoRII CCWGG 1 cut(s) 290
EcoT14I CCWWGG 4 cut(s) 590, 690, 880, 1108
EcoT38I GRGCYC 1 cut(s) 405
ErhI CCWWGG 4 cut(s) 590, 690, 880, 1108
FaeI CATG 6 cut(s) 209, 360, 470, 694, 1024, 1112
FalI AAGNNNNNCTT 4 cut(s) 204, 236, 371, 403
FaqI GGGAC 2 cut(s) 608, 1115
FatI CATG 6 cut(s) 205, 356, 466, 690, 1020, 1108
FbaI TGATCA 2 cut(s) 373, 421
FblI GTMKAC 1 cut(s) 605
Fnu4HI GCNGC 3 cut(s) 720, 1144, 1217
FokI GGATG 7 cut(s) 68, 98, 351, 373, 758, 934, 1070
FriOI GRGCYC 1 cut(s) 405
Fsp4HI GCNGC 3 cut(s) 720, 1144, 1217
FspBI CTAG 3 cut(s) 881, 990, 1250
GluI GCNGC 3 cut(s) 720, 1144, 1217
GsaI CCCAGC 1 cut(s) 1089
GsuI CTGGAG 1 cut(s) 1157
HaeIII GGCC 2 cut(s) 152, 835
HapII CCGG 2 cut(s) 819, 910
HgaI GACGC 1 cut(s) 1235
Hin1I GRCGYC 1 cut(s) 1246
Hin1II CATG 6 cut(s) 209, 360, 470, 694, 1024, 1112
HindIII AAGCTT 1 cut(s) 380
HinfI GANTC 5 cut(s) 229, 344, 665, 913, 1265
HpaII CCGG 2 cut(s) 819, 910
HphI GGTGA 3 cut(s) 199, 227, 1124
Hpy166II GTNNAC 2 cut(s) 532, 606
Hpy188I TCNGA 8 cut(s) 22, 226, 240, 331, 378, 523, 954, 1158
Hpy188III TCNNGA 5 cut(s) 95, 425, 448, 1136, 1250
Hpy8I GTNNAC 2 cut(s) 532, 606
HpyAV CCTTC 6 cut(s) 137, 206, 607, 786, 816, 951
HpyCH4III ACNGT 7 cut(s) 167, 505, 536, 599, 831, 840, 1208
HpyCH4IV ACGT 1 cut(s) 526
HpyF10VI GCNNNNNNNGC 3 cut(s) 719, 1021, 1252
HpyF3I CTNAG 2 cut(s) 723, 1006
HpySE526I ACGT 1 cut(s) 526
Hsp92I GRCGYC 1 cut(s) 1246
Hsp92II CATG 6 cut(s) 209, 360, 470, 694, 1024, 1112
Ksp22I TGATCA 2 cut(s) 373, 421
Kzo9I GATC 8 cut(s) 373, 421, 616, 645, 961, 1104, 1201, 1269
LguI GCTCTTC 1 cut(s) 174
LmnI GCTCC 3 cut(s) 308, 400, 1043
Lsp1109I GCAGC 3 cut(s) 706, 1155, 1203
LweI GCATC 1 cut(s) 120
MaeI CTAG 3 cut(s) 881, 990, 1250
MaeII ACGT 1 cut(s) 526
MaeIII GTNAC 3 cut(s) 161, 1061, 1180
MalI GATC 8 cut(s) 375, 423, 618, 647, 963, 1106, 1203, 1271
MboI GATC 8 cut(s) 373, 421, 616, 645, 961, 1104, 1201, 1269
MboII GAAGA 6 cut(s) 67, 191, 471, 474, 588, 956
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 1 cut(s) 961
MhlI GDGCHC 1 cut(s) 405
MlsI TGGCCA 1 cut(s) 835
MluCI AATT 7 cut(s) 12, 25, 45, 297, 538, 708, 734
MluNI TGGCCA 1 cut(s) 835
MlyI GAGTC 2 cut(s) 223, 353
MmeI TCCRAC 1 cut(s) 642
Mox20I TGGCCA 1 cut(s) 835
MscI TGGCCA 1 cut(s) 835
MseI TTAA 6 cut(s) 701, 737, 797, 1052, 1092, 1191
MslI CAYNNNNRTG 1 cut(s) 1157
Msp20I TGGCCA 1 cut(s) 835
MspCI CTTAAG 1 cut(s) 796
MspI CCGG 2 cut(s) 819, 910
MspR9I CCNGG 1 cut(s) 292
MunI CAATTG 1 cut(s) 708
MvaI CCWGG 1 cut(s) 292
MwoI GCNNNNNNNGC 3 cut(s) 719, 1021, 1252
NcoI CCATGG 2 cut(s) 690, 1108
NdeII GATC 8 cut(s) 373, 421, 616, 645, 961, 1104, 1201, 1269
NlaIII CATG 6 cut(s) 209, 360, 470, 694, 1024, 1112
NlaIV GGNNCC 1 cut(s) 402
NmeAIII GCCGAG 1 cut(s) 1222
PaqCI CACCTGC 1 cut(s) 175
PceI AGGCCT 1 cut(s) 152
PciSI GCTCTTC 1 cut(s) 174
PcsI WCGNNNNNNNCGW 1 cut(s) 532
PfeI GAWTC 3 cut(s) 665, 913, 1265
PfoI TCCNGGA 1 cut(s) 290
PkrI GCNGC 3 cut(s) 721, 1145, 1218
Ple19I CGATCG 1 cut(s) 1272
PleI GAGTC 2 cut(s) 223, 352
PpsI GAGTC 2 cut(s) 223, 352
PshBI ATTAAT 1 cut(s) 737
Psp6I CCWGG 1 cut(s) 290
PspEI GGTNACC 1 cut(s) 1180
PspFI CCCAGC 1 cut(s) 1085
PspGI CCWGG 1 cut(s) 290
PspN4I GGNNCC 1 cut(s) 402
PsuI RGATCY 1 cut(s) 961
PvuI CGATCG 1 cut(s) 1272
RsaI GTAC 2 cut(s) 804, 872
RsaNI GTAC 2 cut(s) 803, 871
RseI CAYNNNNRTG 1 cut(s) 1157
SapI GCTCTTC 1 cut(s) 174
SaqAI TTAA 6 cut(s) 701, 737, 797, 1052, 1092, 1191
SatI GCNGC 3 cut(s) 720, 1144, 1217
Sau3AI GATC 8 cut(s) 373, 421, 616, 645, 961, 1104, 1201, 1269
ScaI AGTACT 1 cut(s) 804
SchI GAGTC 2 cut(s) 223, 353
ScrFI CCNGG 1 cut(s) 292
SduI GDGCHC 1 cut(s) 405
SfaNI GCATC 1 cut(s) 120
SmiMI CAYNNNNRTG 1 cut(s) 1157
SmlI CTYRAG 2 cut(s) 61, 796
SmoI CTYRAG 2 cut(s) 61, 796
Sse9I AATT 7 cut(s) 12, 25, 45, 297, 538, 708, 734
SseBI AGGCCT 1 cut(s) 152
SsiI CCGC 1 cut(s) 306
SspMI CTAG 3 cut(s) 881, 990, 1250
StuI AGGCCT 1 cut(s) 152
StyD4I CCNGG 1 cut(s) 290
StyI CCWWGG 4 cut(s) 590, 690, 880, 1108
TaaI ACNGT 7 cut(s) 167, 505, 536, 599, 831, 840, 1208
TaiI ACGT 1 cut(s) 529
TaqI TCGA 4 cut(s) 447, 558, 886, 1268
TasI AATT 7 cut(s) 12, 25, 45, 297, 538, 708, 734
TatI WGTACW 1 cut(s) 802
TfiI GAWTC 3 cut(s) 665, 913, 1265
Tru1I TTAA 6 cut(s) 701, 737, 797, 1052, 1092, 1191
Tru9I TTAA 6 cut(s) 701, 737, 797, 1052, 1092, 1191
TscAI CASTG 2 cut(s) 424, 510
TseI GCWGC 3 cut(s) 719, 1143, 1216
TspDTI ATGAA 3 cut(s) 345, 377, 956
TspRI CASTG 2 cut(s) 424, 510
Vha464I CTTAAG 1 cut(s) 796
VspI ATTAAT 1 cut(s) 737
XbaI TCTAGA 1 cut(s) 1249
XmaJI CCTAGG 1 cut(s) 880
XmiI GTMKAC 1 cut(s) 605
XspI CTAG 3 cut(s) 881, 990, 1250
ZrmI AGTACT 1 cut(s) 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.