Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0014244

Physical Location & Seq

Genomic Coordinates Reverse (-)

3047563 .. 3051923

Gene Structure 4361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G020600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 711 bp

ATGGGGAGGATTGGTTTGCTTGTATCAGATTTCACAATGTCATTCATGTGGGTTTGGTCAGGGGTCTTGATTAAGATGTATGTTTACAACAATCTGGGGTTTGGCCATGAACCCACCGGTGAAATTATCAAATCCACTCTGTCGATTGTAAACATGTTCTTCTTTGCCTTGCTGGGAAAGATTACCAATGGTGGCACTTACAATCCTCTCACCGTTTTTGCTGCCGCAATCACTGGGGATTTCACCCGCTTCCTTTTCACTGTTGCTGCAAGAATCCCTGCTCAGGTTATTGGCTCTATTGCTGGGGTCAAGCTCATAATTCAGCTCTTTCCTGAAGTAGGTCTTGGGCCACGTCTGAATGTTGATATCCATCGAGGTGCACTTACAGAAGGATTGCTAACATTTGCAATTGTTACTATCTCACTTGGGCTTGCCAGAAACATCCCAGGGAGTTTCTTCATGAAGACATGGATCTCAAGTGTTTCTAAGTTAACTCTTCATATTCTTGGCTCTGATCTGACCGGTGGTTGCATGAACCCAGCCTCTGTGATGGGATGGGCTTATGCTCGTGGCACCCACGTAACGAAGGAGCATATACTTGTCTACTGGCTTGCCCCGATTGAGGCGACTCTACTGGCCATATGGACATTTAGGGTGCTAGTTCCACAACTAAAAGAGGAAAAGGTAGACAAGAAGGCTAAATCAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005372 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006833 GO:0008150 GO:0015250 GO:0015267 GO:0015318 GO:0016020 GO:0016021 GO:0022803 GO:0022838 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0042044 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MIP

Protein Analysis

237

Amino Acids

25.85

Weight (kDa)

9.52

Isoelectric Point (pI)

24.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56950 AT3G56950
fragaria_vesca	FvH4_1g24870
malus_domestica	MD02G1144000.v1.1 MD15G1257400.v1.1
prunus_persica	Prupe.7G020600_v2.0.a1
pyrus_communis	pycom02g11390 pycom15g22520
rosa_chinensis	RchiOBHm_Chr2g0122531
rosa_laevigata	RLG00000018682
rosa_roxburghii	Rroxscaffold_2G00121500
rosa_rugosa	Rorug02G0239300
rosa_samantha	Rh2AG298000 Rh2BG306700 Rh2CG284800 Rh2DG321600
rosa_wichuraiana	Rw2G023690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	572
AccI	GTMKAC	2 cut(s)	603, 687
AciI	CCGC	2 cut(s)	225, 247
AclWI	GGATC	1 cut(s)	479
AcoI	YGGCCR	2 cut(s)	103, 636
AcuI	CTGAAG	1 cut(s)	354
AfiI	CCNNNNNNNGG	3 cut(s)	283, 338, 622
AflIII	ACRYGT	1 cut(s)	153
AgeI	ACCGGT	2 cut(s)	116, 521
AjiI	CACGTC	1 cut(s)	353
AjnI	CCWGG	1 cut(s)	445
AjuI	GAANNNNNNNTTGG	2 cut(s)	327, 359
AluBI	AGCT	2 cut(s)	313, 325
AluI	AGCT	2 cut(s)	313, 325
Alw21I	GWGCWC	1 cut(s)	382
Alw44I	GTGCAC	1 cut(s)	378
AlwI	GGATC	1 cut(s)	479
AlwNI	CAGNNNCTG	1 cut(s)	545
AoxI	GGCC	3 cut(s)	103, 347, 636
ApaLI	GTGCAC	1 cut(s)	378
ApeKI	GCWGC	2 cut(s)	221, 266
AsiGI	ACCGGT	2 cut(s)	116, 521
AspS9I	GGNCC	1 cut(s)	347
AsuHPI	GGTGA	3 cut(s)	131, 202, 235
BaeGI	GKGCMC	1 cut(s)	382
BalI	TGGCCA	2 cut(s)	105, 638
BanI	GGYRCC	1 cut(s)	572
BauI	CACGAG	1 cut(s)	567
BbsI	GAAGAC	1 cut(s)	470
Bbv12I	GWGCWC	1 cut(s)	382
BbvI	GCAGC	2 cut(s)	208, 253
BccI	CCATC	3 cut(s)	378, 544, 549
BciT130I	CCWGG	1 cut(s)	447
BfaI	CTAG	1 cut(s)	659
BisI	GCNGC	3 cut(s)	222, 225, 267
BlsI	GCNGC	3 cut(s)	223, 226, 268
Bme1390I	CCNGG	1 cut(s)	447
BmgBI	CACGTC	1 cut(s)	353
BmgT120I	GGNCC	1 cut(s)	347
BmiI	GGNNCC	1 cut(s)	574
BmrFI	CCNGG	1 cut(s)	447
BmrI	ACTGGG	1 cut(s)	243
BmuI	ACTGGG	1 cut(s)	243
BpiI	GAAGAC	1 cut(s)	470
Bpu10I	CCTNAGC	1 cut(s)	282
BpuEI	CTTGAG	1 cut(s)	460
BsaAI	YACGTR	1 cut(s)	580
BsaBI	GATNNNNATC	1 cut(s)	369
BsaJI	CCNNGG	2 cut(s)	445, 446
BsaWI	WCCGGW	2 cut(s)	116, 521
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	3 cut(s)	283, 338, 622
Bse118I	RCCGGY	2 cut(s)	116, 521
Bse1I	ACTGG	3 cut(s)	238, 611, 639
Bse8I	GATNNNNATC	1 cut(s)	369
BseBI	CCWGG	1 cut(s)	447
BseDI	CCNNGG	2 cut(s)	445, 446
BseGI	GGATG	2 cut(s)	441, 560
BseJI	GATNNNNATC	1 cut(s)	369
BseLI	CCNNNNNNNGG	3 cut(s)	283, 338, 622
BseMII	CTCAG	1 cut(s)	296
BseNI	ACTGG	3 cut(s)	238, 611, 639
BseSI	GKGCMC	1 cut(s)	382
BseXI	GCAGC	2 cut(s)	208, 253
BseYI	CCCAGC	3 cut(s)	172, 302, 538
BshFI	GGCC	3 cut(s)	105, 349, 638
BshNI	GGYRCC	1 cut(s)	572
BshTI	ACCGGT	2 cut(s)	116, 521
BsiHKAI	GWGCWC	1 cut(s)	382
BsiSI	CCGG	2 cut(s)	117, 522
BslI	CCNNNNNNNGG	3 cut(s)	283, 338, 622
BsnI	GGCC	3 cut(s)	105, 349, 638
Bsp1286I	GDGCHC	1 cut(s)	382
Bsp143I	GATC	2 cut(s)	471, 514
BspACI	CCGC	2 cut(s)	225, 247
BspANI	GGCC	3 cut(s)	105, 349, 638
BspCNI	CTCAG	1 cut(s)	295
BspHI	TCATGA	1 cut(s)	459
BspLI	GGNNCC	1 cut(s)	574
BspPI	GGATC	1 cut(s)	479
BspT107I	GGYRCC	1 cut(s)	572
BsrFI	RCCGGY	2 cut(s)	116, 521
BsrI	ACTGG	3 cut(s)	238, 611, 639
BssAI	RCCGGY	2 cut(s)	116, 521
BssECI	CCNNGG	2 cut(s)	445, 446
BssMI	GATC	2 cut(s)	471, 514
BssSI	CACGAG	1 cut(s)	567
Bst2BI	CACGAG	1 cut(s)	567
Bst2UI	CCWGG	1 cut(s)	447
Bst4CI	ACNGT	2 cut(s)	214, 262
Bst6I	CTCTTC	1 cut(s)	501
BstBAI	YACGTR	1 cut(s)	580
BstC8I	GCNNGC	2 cut(s)	432, 612
BstDEI	CTNAG	2 cut(s)	282, 486
BstENI	CCTNNNNNAGG	1 cut(s)	336
BstF5I	GGATG	2 cut(s)	441, 560
BstKTI	GATC	2 cut(s)	474, 517
BstMBI	GATC	2 cut(s)	471, 514
BstNI	CCWGG	1 cut(s)	447
BstNSI	RCATGY	1 cut(s)	157
BstSCI	CCNGG	1 cut(s)	445
BstSLI	GKGCMC	1 cut(s)	382
BstV1I	GCAGC	2 cut(s)	208, 253
BstV2I	GAAGAC	1 cut(s)	470
BstX2I	RGATCY	1 cut(s)	471
BstYI	RGATCY	1 cut(s)	471
BsuRI	GGCC	3 cut(s)	105, 349, 638
BtrI	CACGTC	1 cut(s)	353
BtsCI	GGATG	2 cut(s)	441, 560
BtsIMutI	CAGTG	2 cut(s)	231, 258
Cac8I	GCNNGC	2 cut(s)	432, 612
CaiI	CAGNNNCTG	1 cut(s)	545
CciI	TCATGA	1 cut(s)	459
Cfr10I	RCCGGY	2 cut(s)	116, 521
Cfr13I	GGNCC	1 cut(s)	347
CspAI	ACCGGT	2 cut(s)	116, 521
CviAII	CATG	6 cut(s)	46, 107, 154, 460, 468, 532
DdeI	CTNAG	2 cut(s)	282, 486
DpnI	GATC	2 cut(s)	473, 516
DpnII	GATC	2 cut(s)	471, 514
EaeI	YGGCCR	2 cut(s)	103, 636
Eam1104I	CTCTTC	1 cut(s)	501
EarI	CTCTTC	1 cut(s)	501
Eco32I	GATATC	1 cut(s)	367
Eco57I	CTGAAG	1 cut(s)	354
EcoNI	CCTNNNNNAGG	1 cut(s)	336
EcoRII	CCWGG	1 cut(s)	445
EcoRV	GATATC	1 cut(s)	367
FaeI	CATG	6 cut(s)	49, 110, 157, 463, 471, 535
FalI	AAGNNNNNCTT	2 cut(s)	327, 359
FatI	CATG	6 cut(s)	45, 106, 153, 459, 467, 531
FauI	CCCGC	1 cut(s)	254
FauNDI	CATATG	1 cut(s)	641
FblI	GTMKAC	2 cut(s)	603, 687
Fnu4HI	GCNGC	3 cut(s)	222, 225, 267
FokI	GGATG	2 cut(s)	428, 567
Fsp4HI	GCNGC	3 cut(s)	222, 225, 267
FspBI	CTAG	1 cut(s)	659
GluI	GCNGC	3 cut(s)	222, 225, 267
GsaI	CCCAGC	3 cut(s)	176, 306, 542
HaeIII	GGCC	3 cut(s)	105, 349, 638
HapII	CCGG	2 cut(s)	117, 522
Hin1II	CATG	6 cut(s)	49, 110, 157, 463, 471, 535
HincII	GTYRAC	1 cut(s)	492
HindII	GTYRAC	1 cut(s)	492
HinfI	GANTC	2 cut(s)	273, 628
HpaI	GTTAAC	1 cut(s)	492
HpaII	CCGG	2 cut(s)	117, 522
HphI	GGTGA	3 cut(s)	131, 202, 235
Hpy166II	GTNNAC	6 cut(s)	85, 151, 380, 492, 604, 688
Hpy188I	TCNGA	5 cut(s)	28, 357, 514, 519, 706
Hpy188III	TCNNGA	3 cut(s)	67, 332, 460
Hpy8I	GTNNAC	6 cut(s)	85, 151, 380, 492, 604, 688
HpyAV	CCTTC	3 cut(s)	383, 580, 688
HpyCH4III	ACNGT	2 cut(s)	214, 262
HpyCH4IV	ACGT	2 cut(s)	352, 579
HpyCH4V	TGCA	4 cut(s)	269, 380, 407, 531
HpyF3I	CTNAG	2 cut(s)	282, 486
HpySE526I	ACGT	2 cut(s)	352, 579
Hsp92II	CATG	6 cut(s)	49, 110, 157, 463, 471, 535
KspAI	GTTAAC	1 cut(s)	492
Kzo9I	GATC	2 cut(s)	471, 514
LmnI	GCTCC	1 cut(s)	589
Lsp1109I	GCAGC	2 cut(s)	208, 253
MaeI	CTAG	1 cut(s)	659
MaeII	ACGT	2 cut(s)	352, 579
MaeIII	GTNAC	2 cut(s)	412, 580
MalI	GATC	2 cut(s)	473, 516
MboI	GATC	2 cut(s)	471, 514
MboII	GAAGA	4 cut(s)	151, 448, 475, 488
MfeI	CAATTG	1 cut(s)	408
MflI	RGATCY	1 cut(s)	471
MhlI	GDGCHC	1 cut(s)	382
MlsI	TGGCCA	2 cut(s)	105, 638
MluCI	AATT	3 cut(s)	123, 318, 408
MluNI	TGGCCA	2 cut(s)	105, 638
MlyI	GAGTC	1 cut(s)	622
MnlI	CCTC	5 cut(s)	216, 368, 553, 616, 670
Mox20I	TGGCCA	2 cut(s)	105, 638
MscI	TGGCCA	2 cut(s)	105, 638
MseI	TTAA	2 cut(s)	72, 491
MslI	CAYNNNNRTG	2 cut(s)	46, 375
Msp20I	TGGCCA	2 cut(s)	105, 638
MspI	CCGG	2 cut(s)	117, 522
MspR9I	CCNGG	1 cut(s)	447
MunI	CAATTG	1 cut(s)	408
MvaI	CCWGG	1 cut(s)	447
NdeI	CATATG	1 cut(s)	641
NdeII	GATC	2 cut(s)	471, 514
NlaIII	CATG	6 cut(s)	49, 110, 157, 463, 471, 535
NlaIV	GGNNCC	1 cut(s)	574
NspI	RCATGY	1 cut(s)	157
PagI	TCATGA	1 cut(s)	459
PasI	CCCWGGG	1 cut(s)	446
PciI	ACATGT	1 cut(s)	153
PfeI	GAWTC	1 cut(s)	273
PinAI	ACCGGT	2 cut(s)	116, 521
PkrI	GCNGC	3 cut(s)	223, 226, 268
PleI	GAGTC	1 cut(s)	622
PpsI	GAGTC	1 cut(s)	622
Ppu21I	YACGTR	1 cut(s)	580
PscI	ACATGT	1 cut(s)	153
Psp6I	CCWGG	1 cut(s)	445
PspFI	CCCAGC	3 cut(s)	172, 302, 538
PspGI	CCWGG	1 cut(s)	445
PspN4I	GGNNCC	1 cut(s)	574
PspPI	GGNCC	1 cut(s)	347
PstNI	CAGNNNCTG	1 cut(s)	545
PsuI	RGATCY	1 cut(s)	471
RseI	CAYNNNNRTG	2 cut(s)	46, 375
SaqAI	TTAA	2 cut(s)	72, 491
SatI	GCNGC	3 cut(s)	222, 225, 267
Sau3AI	GATC	2 cut(s)	471, 514
Sau96I	GGNCC	1 cut(s)	347
SchI	GAGTC	1 cut(s)	622
ScrFI	CCNGG	1 cut(s)	447
SduI	GDGCHC	1 cut(s)	382
SetI	ASST	8 cut(s)	288, 315, 327, 343, 355, 379, 582, 687
SgrAI	CRCCGGYG	1 cut(s)	116
SmiMI	CAYNNNNRTG	2 cut(s)	46, 375
SmlI	CTYRAG	1 cut(s)	475
SmoI	CTYRAG	1 cut(s)	475
Sse9I	AATT	3 cut(s)	123, 318, 408
SsiI	CCGC	2 cut(s)	225, 247
SspMI	CTAG	1 cut(s)	659
StyD4I	CCNGG	1 cut(s)	445
TaaI	ACNGT	2 cut(s)	214, 262
TaiI	ACGT	2 cut(s)	355, 582
TaqI	TCGA	2 cut(s)	143, 373
TasI	AATT	3 cut(s)	123, 318, 408
TauI	GCSGC	1 cut(s)	227
TfiI	GAWTC	1 cut(s)	273
Tru1I	TTAA	2 cut(s)	72, 491
Tru9I	TTAA	2 cut(s)	72, 491
TscAI	CASTG	2 cut(s)	238, 265
TseI	GCWGC	2 cut(s)	221, 266
TspDTI	ATGAA	6 cut(s)	34, 123, 448, 476, 488, 548
TspRI	CASTG	2 cut(s)	238, 265
VneI	GTGCAC	1 cut(s)	378
XagI	CCTNNNNNAGG	1 cut(s)	336
XceI	RCATGY	1 cut(s)	157
XmiI	GTMKAC	2 cut(s)	603, 687
XspI	CTAG	1 cut(s)	659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.