Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010662

Physical Location & Seq

Genomic Coordinates Reverse (-)

3537860 .. 3547289

Gene Structure 9430 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G022600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGGCACAGAATAAACCCAAGAGGCTATACCAAGTCTGGAAAGGAAGCAATAACTTTCTCTGTGGTGGGAGATTAATTTTTGGTCCTGATGTGGCATCTCTTCTTCTGTCCACACTTCTTGTTGCCGGCCCAGCAGTTGCCTTTTGTATAAAGGTTTATCTTAAAATCAAACATGGGAAGAATACAGATTATCCTGTATTAATTGTTGGCTCAGTCCTTGCTGTTTTGGATTTAACATTTCTGTTCTTGACTTCTGGTAGGGATCCTGGAATAGTCCCTAGAAATTCAAGGCCTCCTGAATCAGATGAAGCATTTGATCTAGCAACCCCATCAATGGAGTGGGTTAATGAAAGAACTCCTCATTTGAAACTACCACGAACCAAAGATGTCATTGTAAATGGTCACACAGTAAAAGTGAAGTACTGTGATACTTGTTTGCTTTATCGCCCTCCTCGTGTATCTCACTGTTCTATCTGCAACAATTGTGTTCAGAGATTCGATCATCATTGTCCATGGGTTGGCCAATGCATTGGAATTCGTAACTATAGGTTCTTCTTCATGTTCATATCAACCTCAACCATACTGTGCATATATGTTTTTGTCTTCTCTTGGATAAATATAGTTCAAGAAGGCGGTGTTCCAAAAGCTGTGTCGAAAGATATCCTCTCAGATTTCCTTTTAGTGTACTGCTTCATCGCTATCTGGTTTGTTGGTGGCCTTACAATCTTCCATTCCTACTTGATATGCACAAACCAGACAACATATGAAAACTTCCGGTACCGATATGATAAGAAGGAGAACCCATATAACAAAGGAGTGATGTGGAACATCAAAGAAGTTTTTTTCTCTAAGATCCCTCCTTCAATGAATAGATTCCGATCATTCATTGAAATGGATGAACAGATGATCGCAGGATCTGTGACTCCAAATCTTGATGAAGGTATTATGGGCTCAAAGGAGAAAATTGATATTGAAATGGGAACTGGCATTGCGGAGGACAATGGTTTTCCAATTCCCAACCTTTTGCTGAATTTTGACTATGATGATTTGGAGGATGATTTGAAGAATGCAGGGGAACAACGAGGACCTGCTTTTGACACTTTCTTTCCCATTCAGACAGAAGCAAAAGAATCTGTGAAATACTCAATGGATGGAGATAAAATTACAGAATCTGTGCAAAGTGTTACTACAAGGGATGGAGTGAGAGATTCTGTGGGAAGCTCACCTCCGAGAGATGAATTGAGAGCATCTGTACAGAGCACCATTTCCTTGGATGGAGCAAATGAGGAAGCTGATTGTGGAAATAACGATCCTAAAACCAAGCATGAAGGTTTGGCTACAACAGATCTCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005798 GO:0005886 GO:0007275 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0021700 GO:0022622 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030154 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0035618 GO:0040007 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0060560 GO:0071695 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0097708 GO:0099402 GO:0120025 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04391 map04391

Pfam Domains

Protein Families

DHHC

Protein Analysis

452

Amino Acids

50.79

Weight (kDa)

5.71

Isoelectric Point (pI)

25.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010662)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56930 AT3G56930
fragaria_vesca	FvH4_1g28800 FvH4_1g28800 FvH4_1g28800
malus_domestica	MD00G1107600.v1.1 MD14G1100600.v1.1
prunus_persica	Prupe.7G022600_v2.0.a1
pyrus_communis	pycom12g09230 pycom14g08900
rosa_chinensis	RchiOBHm_Chr3g0493221
rosa_laevigata	RLG00000022721
rosa_multiflora	Rmu_sc0003406.1_g000006
rosa_roxburghii	Rroxscaffold_6G00391740
rosa_rugosa	Rorug03G0259900
rosa_samantha	Rh3AG308800 Rh3BG344800 Rh3CG342000 Rh3DG344100
rosa_wichuraiana	Rw3G027150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1096
Acc65I	GGTACC	1 cut(s)	777
AccB1I	GGYRCC	1 cut(s)	777
AccB7I	CCANNNNNTGG	1 cut(s)	518
AciI	CCGC	2 cut(s)	633, 992
AclWI	GGATC	5 cut(s)	257, 270, 847, 922, 1304
AcoI	YGGCCR	1 cut(s)	520
AcsI	RAATTY	3 cut(s)	283, 534, 1030
AfaI	GTAC	4 cut(s)	422, 686, 779, 1254
AfiI	CCNNNNNNNGG	2 cut(s)	334, 518
AgsI	TTSAA	7 cut(s)	288, 367, 626, 864, 890, 974, 1063
AjnI	CCWGG	1 cut(s)	265
AluBI	AGCT	3 cut(s)	647, 1221, 1292
AluI	AGCT	3 cut(s)	647, 1221, 1292
Alw21I	GWGCWC	1 cut(s)	1262
AlwI	GGATC	5 cut(s)	257, 270, 847, 922, 1304
AlwNI	CAGNNNCTG	2 cut(s)	917, 1172
AoxI	GGCC	4 cut(s)	127, 290, 520, 715
ApoI	RAATTY	3 cut(s)	283, 534, 1030
ArsI	GACNNNNNNTTYG	2 cut(s)	635, 667
AseI	ATTAAT	2 cut(s)	74, 200
Asp700I	GAANNNNTTC	1 cut(s)	872
Asp718I	GGTACC	1 cut(s)	777
AspS9I	GGNCC	3 cut(s)	83, 128, 1085
AsuHPI	GGTGA	1 cut(s)	1215
AvaII	GGWCC	2 cut(s)	83, 1085
BalI	TGGCCA	1 cut(s)	522
BamHI	GGATCC	1 cut(s)	262
BanI	GGYRCC	1 cut(s)	777
BanII	GRGCYC	1 cut(s)	953
BauI	CACGAG	1 cut(s)	453
BbsI	GAAGAC	1 cut(s)	595
Bbv12I	GWGCWC	1 cut(s)	1262
BccI	CCATC	4 cut(s)	337, 1145, 1190, 1268
BciT130I	CCWGG	1 cut(s)	267
BfaI	CTAG	3 cut(s)	279, 320, 1354
BfmI	CTRYAG	1 cut(s)	544
BfuAI	ACCTGC	1 cut(s)	1096
BglII	AGATCT	1 cut(s)	1345
BmcAI	AGTACT	1 cut(s)	422
Bme1390I	CCNGG	1 cut(s)	267
Bme18I	GGWCC	2 cut(s)	83, 1085
BmgT120I	GGNCC	3 cut(s)	83, 128, 1085
BmiI	GGNNCC	2 cut(s)	264, 779
BmrFI	CCNGG	1 cut(s)	267
BmsI	GCATC	2 cut(s)	104, 1256
BpiI	GAAGAC	1 cut(s)	595
BsaBI	GATNNNNATC	1 cut(s)	877
BsaJI	CCNNGG	2 cut(s)	512, 1269
BsaWI	WCCGGW	1 cut(s)	774
Bsc4I	CCNNNNNNNGG	2 cut(s)	334, 518
Bse118I	RCCGGY	1 cut(s)	125
Bse1I	ACTGG	1 cut(s)	988
Bse3DI	GCAATG	1 cut(s)	987
Bse8I	GATNNNNATC	1 cut(s)	877
BseBI	CCWGG	1 cut(s)	267
BseDI	CCNNGG	2 cut(s)	512, 1269
BseGI	GGATG	5 cut(s)	901, 1060, 1156, 1201, 1279
BseJI	GATNNNNATC	1 cut(s)	877
BseLI	CCNNNNNNNGG	2 cut(s)	334, 518
BseMI	GCAATG	1 cut(s)	987
BseMII	CTCAG	2 cut(s)	225, 681
BseNI	ACTGG	1 cut(s)	988
BseRI	GAGGAG	2 cut(s)	348, 441
BseYI	CCCAGC	1 cut(s)	130
BshFI	GGCC	4 cut(s)	129, 292, 522, 717
BshNI	GGYRCC	1 cut(s)	777
BsiHKAI	GWGCWC	1 cut(s)	1262
BsiSI	CCGG	2 cut(s)	126, 775
BslFI	GGGAC	1 cut(s)	260
BslI	CCNNNNNNNGG	2 cut(s)	334, 518
BsmFI	GGGAC	1 cut(s)	260
BsmI	GAATGC	1 cut(s)	1072
BsnI	GGCC	4 cut(s)	129, 292, 522, 717
Bsp1286I	GDGCHC	2 cut(s)	953, 1262
Bsp1407I	TGTACA	1 cut(s)	1252
Bsp143I	GATC	9 cut(s)	262, 316, 499, 852, 878, 906, 914, 1309, 1345
Bsp19I	CCATGG	1 cut(s)	512
BspACI	CCGC	2 cut(s)	633, 992
BspANI	GGCC	4 cut(s)	129, 292, 522, 717
BspCNI	CTCAG	2 cut(s)	224, 680
BspLI	GGNNCC	2 cut(s)	264, 779
BspMI	ACCTGC	1 cut(s)	1096
BspPI	GGATC	5 cut(s)	257, 270, 847, 922, 1304
BspT107I	GGYRCC	1 cut(s)	777
BsrDI	GCAATG	1 cut(s)	987
BsrFI	RCCGGY	1 cut(s)	125
BsrGI	TGTACA	1 cut(s)	1252
BsrI	ACTGG	1 cut(s)	988
BssAI	RCCGGY	1 cut(s)	125
BssECI	CCNNGG	2 cut(s)	512, 1269
BssMI	GATC	9 cut(s)	262, 316, 499, 852, 878, 906, 914, 1309, 1345
BssSI	CACGAG	1 cut(s)	453
BssT1I	CCWWGG	2 cut(s)	512, 1269
Bst2BI	CACGAG	1 cut(s)	453
Bst2UI	CCWGG	1 cut(s)	267
Bst4CI	ACNGT	4 cut(s)	409, 425, 467, 585
Bst6I	CTCTTC	1 cut(s)	105
BstAUI	TGTACA	1 cut(s)	1252
BstC8I	GCNNGC	1 cut(s)	127
BstDEI	CTNAG	3 cut(s)	211, 667, 849
BstDSI	CCRYGG	1 cut(s)	512
BstF5I	GGATG	5 cut(s)	901, 1060, 1156, 1201, 1279
BstKTI	GATC	9 cut(s)	265, 319, 502, 855, 881, 909, 917, 1312, 1348
BstMBI	GATC	9 cut(s)	262, 316, 499, 852, 878, 906, 914, 1309, 1345
BstMWI	GCNNNNNNNGC	1 cut(s)	131
BstNI	CCWGG	1 cut(s)	267
BstSCI	CCNGG	1 cut(s)	265
BstSFI	CTRYAG	1 cut(s)	544
BstV2I	GAAGAC	1 cut(s)	595
BstX2I	RGATCY	4 cut(s)	262, 852, 914, 1345
BstXI	CCANNNNNNTGG	2 cut(s)	530, 1270
BstYI	RGATCY	4 cut(s)	262, 852, 914, 1345
BsuRI	GGCC	4 cut(s)	129, 292, 522, 717
BtgI	CCRYGG	1 cut(s)	512
BtgZI	GCGATG	1 cut(s)	679
BtsCI	GGATG	5 cut(s)	901, 1060, 1156, 1201, 1279
BtsIMutI	CAGTG	1 cut(s)	463
BveI	ACCTGC	1 cut(s)	1096
Cac8I	GCNNGC	1 cut(s)	127
CaiI	CAGNNNCTG	2 cut(s)	917, 1172
Cfr10I	RCCGGY	1 cut(s)	125
Cfr13I	GGNCC	3 cut(s)	83, 128, 1085
Csp6I	GTAC	4 cut(s)	421, 685, 778, 1253
CspCI	CAANNNNNGTGG	2 cut(s)	100, 135
CviAII	CATG	4 cut(s)	173, 513, 559, 1325
CviQI	GTAC	4 cut(s)	421, 685, 778, 1253
DdeI	CTNAG	3 cut(s)	211, 667, 849
DpnI	GATC	9 cut(s)	264, 318, 501, 854, 880, 908, 916, 1311, 1347
DpnII	GATC	9 cut(s)	262, 316, 499, 852, 878, 906, 914, 1309, 1345
EaeI	YGGCCR	1 cut(s)	520
Eam1104I	CTCTTC	1 cut(s)	105
EarI	CTCTTC	1 cut(s)	105
Eco130I	CCWWGG	2 cut(s)	512, 1269
Eco147I	AGGCCT	1 cut(s)	292
Eco24I	GRGCYC	1 cut(s)	953
Eco32I	GATATC	1 cut(s)	661
Eco47I	GGWCC	2 cut(s)	83, 1085
EcoO109I	RGGNCCY	1 cut(s)	1085
EcoRI	GAATTC	1 cut(s)	534
EcoRII	CCWGG	1 cut(s)	265
EcoRV	GATATC	1 cut(s)	661
EcoT14I	CCWWGG	2 cut(s)	512, 1269
EcoT22I	ATGCAT	1 cut(s)	530
EcoT38I	GRGCYC	1 cut(s)	953
ErhI	CCWWGG	2 cut(s)	512, 1269
FaeI	CATG	4 cut(s)	176, 516, 562, 1328
FaqI	GGGAC	1 cut(s)	260
FatI	CATG	4 cut(s)	172, 512, 558, 1324
FauNDI	CATATG	1 cut(s)	763
FokI	GGATG	5 cut(s)	908, 1067, 1163, 1208, 1286
FriOI	GRGCYC	1 cut(s)	953
FspBI	CTAG	3 cut(s)	279, 320, 1354
GsaI	CCCAGC	1 cut(s)	134
HaeIII	GGCC	4 cut(s)	129, 292, 522, 717
HapII	CCGG	2 cut(s)	126, 775
Hin1II	CATG	4 cut(s)	176, 516, 562, 1328
HinfI	GANTC	7 cut(s)	299, 495, 873, 922, 1130, 1169, 1208
HpaII	CCGG	2 cut(s)	126, 775
HphI	GGTGA	1 cut(s)	1215
Hpy166II	GTNNAC	2 cut(s)	111, 685
Hpy188I	TCNGA	6 cut(s)	304, 492, 670, 878, 1116, 1230
Hpy188III	TCNNGA	6 cut(s)	37, 86, 247, 296, 626, 932
Hpy8I	GTNNAC	2 cut(s)	111, 685
HpyAV	CCTTC	5 cut(s)	623, 787, 870, 932, 1322
HpyCH4III	ACNGT	4 cut(s)	409, 425, 467, 585
HpyCH4V	TGCA	6 cut(s)	477, 528, 588, 747, 1070, 1177
HpyF10VI	GCNNNNNNNGC	1 cut(s)	131
HpyF3I	CTNAG	3 cut(s)	211, 667, 849
Hsp92II	CATG	4 cut(s)	176, 516, 562, 1328
KpnI	GGTACC	1 cut(s)	781
KroI	GCCGGC	1 cut(s)	125
KroNI	GCCGGC	1 cut(s)	127
Kzo9I	GATC	9 cut(s)	262, 316, 499, 852, 878, 906, 914, 1309, 1345
LmnI	GCTCC	1 cut(s)	1277
LweI	GCATC	2 cut(s)	104, 1256
MaeI	CTAG	3 cut(s)	279, 320, 1354
MaeIII	GTNAC	4 cut(s)	401, 539, 919, 1183
MalI	GATC	9 cut(s)	264, 318, 501, 854, 880, 908, 916, 1311, 1347
MboI	GATC	9 cut(s)	262, 316, 499, 852, 878, 906, 914, 1309, 1345
MboII	GAAGA	9 cut(s)	92, 95, 190, 544, 547, 595, 718, 1075, 1342
MfeI	CAATTG	1 cut(s)	481
MflI	RGATCY	4 cut(s)	262, 852, 914, 1345
MhlI	GDGCHC	2 cut(s)	953, 1262
MlsI	TGGCCA	1 cut(s)	522
MluNI	TGGCCA	1 cut(s)	522
MlyI	GAGTC	1 cut(s)	916
Mox20I	TGGCCA	1 cut(s)	522
Mph1103I	ATGCAT	1 cut(s)	530
MroNI	GCCGGC	1 cut(s)	125
MroXI	GAANNNNTTC	1 cut(s)	872
MscI	TGGCCA	1 cut(s)	522
MseI	TTAA	5 cut(s)	74, 162, 200, 233, 345
MslI	CAYNNNNRTG	1 cut(s)	890
Msp20I	TGGCCA	1 cut(s)	522
MspI	CCGG	2 cut(s)	126, 775
MspR9I	CCNGG	1 cut(s)	267
MunI	CAATTG	1 cut(s)	481
Mva1269I	GAATGC	1 cut(s)	1072
MvaI	CCWGG	1 cut(s)	267
MwoI	GCNNNNNNNGC	1 cut(s)	131
NaeI	GCCGGC	1 cut(s)	127
NcoI	CCATGG	1 cut(s)	512
NdeI	CATATG	1 cut(s)	763
NdeII	GATC	9 cut(s)	262, 316, 499, 852, 878, 906, 914, 1309, 1345
NgoMIV	GCCGGC	1 cut(s)	125
NlaIII	CATG	4 cut(s)	176, 516, 562, 1328
NlaIV	GGNNCC	2 cut(s)	264, 779
NmuCI	GTSAC	2 cut(s)	401, 919
NsiI	ATGCAT	1 cut(s)	530
PceI	AGGCCT	1 cut(s)	292
PcsI	WCGNNNNNNNCGW	1 cut(s)	451
PctI	GAATGC	1 cut(s)	1072
PdiI	GCCGGC	1 cut(s)	127
PdmI	GAANNNNTTC	1 cut(s)	872
PfeI	GAWTC	6 cut(s)	299, 495, 873, 1130, 1169, 1208
PflMI	CCANNNNNTGG	1 cut(s)	518
PfoI	TCCNGGA	1 cut(s)	265
PleI	GAGTC	1 cut(s)	916
PpsI	GAGTC	1 cut(s)	916
PpuMI	RGGWCCY	1 cut(s)	1085
PshBI	ATTAAT	2 cut(s)	74, 200
Psp5II	RGGWCCY	1 cut(s)	1085
Psp6I	CCWGG	1 cut(s)	265
PspFI	CCCAGC	1 cut(s)	130
PspGI	CCWGG	1 cut(s)	265
PspN4I	GGNNCC	2 cut(s)	264, 779
PspPI	GGNCC	3 cut(s)	83, 128, 1085
PspPPI	RGGWCCY	1 cut(s)	1085
PstNI	CAGNNNCTG	2 cut(s)	917, 1172
PsuI	RGATCY	4 cut(s)	262, 852, 914, 1345
RsaI	GTAC	4 cut(s)	422, 686, 779, 1254
RsaNI	GTAC	4 cut(s)	421, 685, 778, 1253
RseI	CAYNNNNRTG	1 cut(s)	890
SaqAI	TTAA	5 cut(s)	74, 162, 200, 233, 345
Sau3AI	GATC	9 cut(s)	262, 316, 499, 852, 878, 906, 914, 1309, 1345
Sau96I	GGNCC	3 cut(s)	83, 128, 1085
ScaI	AGTACT	1 cut(s)	422
SchI	GAGTC	1 cut(s)	916
ScrFI	CCNGG	1 cut(s)	267
SduI	GDGCHC	2 cut(s)	953, 1262
SfaNI	GCATC	2 cut(s)	104, 1256
SfcI	CTRYAG	1 cut(s)	544
SinI	GGWCC	2 cut(s)	83, 1085
SmiMI	CAYNNNNRTG	1 cut(s)	890
SseBI	AGGCCT	1 cut(s)	292
SsiI	CCGC	2 cut(s)	633, 992
SspMI	CTAG	3 cut(s)	279, 320, 1354
StuI	AGGCCT	1 cut(s)	292
StyD4I	CCNGG	1 cut(s)	265
StyI	CCWWGG	2 cut(s)	512, 1269
TaaI	ACNGT	4 cut(s)	409, 425, 467, 585
TaqI	TCGA	2 cut(s)	498, 653
TatI	WGTACW	3 cut(s)	420, 684, 1252
TfiI	GAWTC	6 cut(s)	299, 495, 873, 1130, 1169, 1208
Tru1I	TTAA	5 cut(s)	74, 162, 200, 233, 345
Tru9I	TTAA	5 cut(s)	74, 162, 200, 233, 345
TscAI	CASTG	1 cut(s)	470
TseFI	GTSAC	2 cut(s)	401, 919
Tsp45I	GTSAC	2 cut(s)	401, 919
TspRI	CASTG	1 cut(s)	470
Van91I	CCANNNNNTGG	1 cut(s)	518
VpaK11BI	GGWCC	2 cut(s)	83, 1085
VspI	ATTAAT	2 cut(s)	74, 200
XapI	RAATTY	3 cut(s)	283, 534, 1030
XcmI	CCANNNNNNNNNTGG	1 cut(s)	336
XmnI	GAANNNNTTC	1 cut(s)	872
XspI	CTAG	3 cut(s)	279, 320, 1354
ZrmI	AGTACT	1 cut(s)	422
Zsp2I	ATGCAT	1 cut(s)	530

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.