Prupe.7G047100_v2.0.a1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0012639
Physical Location & Seq
Reverse (-)
8341872 .. 8343914
2043 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G047100.1

Sequence Viewer

Length: 2043 bp
TCGGTGCTGCATTCATGCAAGGACCTTCAGACCCTGAGACAATTCCATGCTCGTATCCTAGTCTCAACTGGGTTCAAACCCCCTTCCCTTCTGTCAAAGTTGATCACTTTGTATTCTCGGTTCAATGGTGTCGAGAGCGCTGCTTTGGTTTTCAGATCAATCCAAGAACCAAATACCATGTTGTCGAACTTGATCATAAAGTCTCATGTCGACTCGGGTCTGCTTGGTTCGGCTCTGTTGCTGTACAAAAAGATGCTTGAATTGGGTGTTTCACATGATTGCTTCACGTTTCCGATTGTAAACAGGGCGGTTTTGTTGCTTGGGAGTGATGCTACATATTCAGGAATGGTTCATTGTGTGGCAATTCAGATGGGTTTTGGAATGGATGTATATGTTGGCAATACAATGATTGATGCGTATGTGAAATGCGGAAGACTTGATTATGCTCGTAAGCTGTTTGATGAGATGCGTCAGAGAGATTTGGTTACTTGGACATCGATGATTTCCGGCTATGTTTCTGAAGGAAACGTTGCCTGTGGGTTTAGTTTGTTCAGTGAAATGAGGAGGGAGTTGGAACCAAATGCCGTGACAATGCTGGTCATGTTGCAAGGCTGTTGTGACATTGAAATTTCAGTTTATGGGGAACCACTTCATGGTTATGGGATTAAGAGTGGTTTACTAAATGATGGGTCTGTACAGAACTCAATTTTCAAAATGTATGCTAAATTAGGTACCGTTGACCAAGTCGAAGATTTTTTCGGCGAACTTGATAGAAGGGATGTTGTTTCCTGGAATATTCGTATTTCCTTTTATTCTTGGAGAGGGGATGTTGTAAAGGTAAGAGACTTGTTTCATGAAATGCAGGGTGAAGTAGCACCCAGCAATGAGACATTGACGTTGGTTATATCAGCAGTAACCAAACATGGGATTCTTTCCCAAGGTGAAAGCTTGCATTGCTTGGCAACAAAAAGTGGGCTTTGCGACGACGTCTTGCAAACATCTTTGTTGGACTTCTATGCCAAGTGCGGGGAATTGGGAAACTCAGATAAACTGTTTAGAGAAATCCCTCATAGAAACAGCATTACTTGGGGTGCAATGATGTTTGGCTTTATTCTAAATGGTTATTTCAATGAGGCTGTTGGGTTGTTCGGCCGAATGCAAGCTGAAGGTGTTGAACCCGGGGCTGAGATACTAAGAAGCCTAGTTGATGCATTTGCAAACATAGGGGCTCTCAAGTTAGGAAAAGGAATTCATGGTTGCATAATAAGGAAATCTTTTTGTGAAGTTAAGAAGTGCAATACTCATCTTGAAACCTCCCTAATAAACATGTACGTAAGATGCGGTAGCATATCTATGGCTAGAGTCTGTTTTAGTAGAATGTTGATCAGAGATATAGTGGCATGGACATCAATGATCGAGGGGTATGGGAGCCATGGACTTGGTTTGGAAGCCTTGAAACTGTTTGATCTAATGATAAGAGAAGGAACAAAACCAAATAGTGTCACGTTATTAAGCTTATTATCTGCTTGTAGCCACTCCGGCCTTGTGACCGAAGGTTGTGAAGCTTTCTGCTCCATGAAATGGAAGTTTGGTATCGAACCTGACCTAGACCATTACACAAGCATTGTTGATCTCTTGGGTCGATCCGGGAAGCTCAAAGAGGCCTTAGTGGTCATTATGAAAATGGTTATTTTTCCAGACAGTAGGATTTGGGGTGCTCTTCTTTCAGGGTCTAGAATTTACGGTCGTAGAGATGTGGGGGAATTTGCAGCTCAGAGGCTGTTGGAACTAGAACCTGATAATGTCGGGTATTATACTCTATTGAGTAATGCACAAGCTAGTGTTGGAGAGTGGGATGAAGTAGAAGAGATAAGGAGAGTTATGAAGGAGAGGGATCTAAAGAAGAAGCCGGGGTGGAGCTGCATTGAGGCTGAAGAAGGAAGGATTTATGGGTTTGTTTCTGGGGATAGATCACACCATCAAATGGAAGCAGTTTATGAAGTGTTGGAATATTTAAGTAGGATGGCACAGGGATTTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

681

Amino Acids

75.76

Weight (kDa)

6.14

Isoelectric Point (pI)

28.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g24950
malus_domestica MD05G1013600.v1.1 MD14G1083400.v1.1
prunus_persica Prupe.7G047100_v2.0.a1
pyrus_communis pycom14g07240
rosa_chinensis RchiOBHm_Chr2g0124611
rosa_laevigata RLG00000018808
rosa_multiflora Rmu_sc0005597.1_g000009
rosa_roxburghii Rroxscaffold_2G00119840
rosa_rugosa Rorug02G0251600 Rorug02G0251700
rosa_samantha Rh2AG310300 Rh2AG310400 Rh2BG318800 Rh2CG297200 Rh2CG302100 Rh2DG334000
rosa_wichuraiana Rw0G009400 Rw2G025100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 990
Acc65I GGTACC 1 cut(s) 731
AccB1I GGYRCC 1 cut(s) 731
AccB7I CCANNNNNTGG 3 cut(s) 653, 1581, 1984
AccI GTMKAC 1 cut(s) 210
AciI CCGC 4 cut(s) 308, 429, 1026, 1341
AclI AACGTT 1 cut(s) 528
AclWI GGATC 2 cut(s) 1638, 1902
AcoI YGGCCR 1 cut(s) 1150
AcsI RAATTY 4 cut(s) 627, 1248, 1737, 1763
AcuI CTGAAG 4 cut(s) 11, 540, 1185, 1953
AcyI GRCGYC 1 cut(s) 987
AfaI GTAC 4 cut(s) 245, 696, 733, 1331
AfeI AGCGCT 1 cut(s) 139
AfiI CCNNNNNNNGG 5 cut(s) 653, 924, 1026, 1581, 1984
AflIII ACRYGT 1 cut(s) 1326
AgsI TTSAA 9 cut(s) 76, 124, 260, 626, 712, 1129, 1175, 1310, 1456
AjnI CCWGG 1 cut(s) 788
Alw21I GWGCWC 1 cut(s) 1720
Alw26I GTCTC 5 cut(s) 31, 67, 207, 837, 881
AlwI GGATC 2 cut(s) 1638, 1902
AlwNI CAGNNNCTG 2 cut(s) 34, 1780
Ama87I CYCGRG 2 cut(s) 214, 1178
Aor51HI AGCGCT 1 cut(s) 139
AoxI GGCC 3 cut(s) 1150, 1540, 1662
ApeKI GCWGC 4 cut(s) 7, 140, 1769, 1920
ApoI RAATTY 4 cut(s) 627, 1248, 1737, 1763
Asp700I GAANNNNTTC 1 cut(s) 648
Asp718I GGTACC 1 cut(s) 731
AspLEI GCGC 1 cut(s) 140
AspS9I GGNCC 1 cut(s) 22
AsuC2I CCSGG 4 cut(s) 1179, 1180, 1648, 1911
AsuHPI GGTGA 2 cut(s) 878, 953
AvaI CYCGRG 2 cut(s) 214, 1178
AvaII GGWCC 1 cut(s) 22
BanI GGYRCC 1 cut(s) 731
BanII GRGCYC 1 cut(s) 1231
BbsI GAAGAC 1 cut(s) 439
Bbv12I GWGCWC 1 cut(s) 1720
BbvI GCAGC 3 cut(s) 127, 1781, 1907
BccI CCATC 4 cut(s) 364, 680, 1986, 2017
BceAI ACGGC 1 cut(s) 569
BcgI CGANNNNNNTGC 2 cut(s) 122, 156
BciT130I CCWGG 1 cut(s) 790
BciVI GTATCC 1 cut(s) 65
BclI TGATCA 3 cut(s) 102, 192, 1383
BcnI CCSGG 4 cut(s) 1179, 1180, 1648, 1911
BcoDI GTCTC 5 cut(s) 31, 67, 207, 837, 881
BfaI CTAG 7 cut(s) 59, 1202, 1359, 1607, 1734, 1790, 1839
BfoI RGCGCY 1 cut(s) 141
BfuI GTATCC 1 cut(s) 65
BglI GCCNNNNNGGC 1 cut(s) 1539
BisI GCNGC 4 cut(s) 8, 141, 1770, 1921
BlsI GCNGC 4 cut(s) 9, 142, 1771, 1922
Bme1390I CCNGG 5 cut(s) 790, 1179, 1180, 1648, 1911
Bme18I GGWCC 1 cut(s) 22
BmeT110I CYCGRG 2 cut(s) 214, 1178
BmgT120I GGNCC 1 cut(s) 22
BmiI GGNNCC 4 cut(s) 576, 645, 733, 1430
BmrFI CCNGG 5 cut(s) 790, 1179, 1180, 1648, 1911
BmrI ACTGGG 1 cut(s) 78
BmsI GCATC 6 cut(s) 243, 319, 403, 456, 1198, 1328
BmuI ACTGGG 1 cut(s) 78
BoxI GACNNNNGTC 1 cut(s) 216
BpiI GAAGAC 1 cut(s) 439
BpuEI CTTGAG 1 cut(s) 1217
BpuMI CCSGG 4 cut(s) 1179, 1180, 1648, 1911
Bsa29I ATCGAT 1 cut(s) 497
BsaAI YACGTR 1 cut(s) 1333
BsaHI GRCGYC 1 cut(s) 987
BsaJI CCNNGG 5 cut(s) 937, 1178, 1179, 1432, 1910
Bsc4I CCNNNNNNNGG 5 cut(s) 653, 924, 1026, 1581, 1984
Bse1I ACTGG 1 cut(s) 73
Bse3DI GCAATG 3 cut(s) 889, 952, 1101
BseBI CCWGG 1 cut(s) 790
BseCI ATCGAT 1 cut(s) 497
BseDI CCNNGG 5 cut(s) 937, 1178, 1179, 1432, 1910
BseGI GGATG 5 cut(s) 391, 784, 832, 1861, 2028
BseLI CCNNNNNNNGG 5 cut(s) 653, 924, 1026, 1581, 1984
BseMI GCAATG 3 cut(s) 889, 952, 1101
BseMII CTCAG 4 cut(s) 26, 1056, 1176, 1787
BseNI ACTGG 1 cut(s) 73
BseRI GAGGAG 1 cut(s) 577
BseX3I CGGCCG 1 cut(s) 1150
BseXI GCAGC 3 cut(s) 127, 1781, 1907
BseYI CCCAGC 1 cut(s) 878
Bsh1285I CGRYCG 2 cut(s) 1153, 1747
BshFI GGCC 3 cut(s) 1152, 1542, 1664
BshNI GGYRCC 1 cut(s) 731
BshVI ATCGAT 1 cut(s) 497
BsiEI CGRYCG 2 cut(s) 1153, 1747
BsiHKAI GWGCWC 1 cut(s) 1720
BsiHKCI CYCGRG 2 cut(s) 214, 1178
BsiSI CCGG 5 cut(s) 507, 1179, 1539, 1647, 1910
BslI CCNNNNNNNGG 5 cut(s) 653, 924, 1026, 1581, 1984
BsmAI GTCTC 5 cut(s) 31, 67, 207, 837, 881
BsmI GAATGC 2 cut(s) 10, 1161
BsnI GGCC 3 cut(s) 1152, 1542, 1664
BsoBI CYCGRG 2 cut(s) 214, 1178
Bsp1286I GDGCHC 2 cut(s) 1231, 1720
Bsp1407I TGTACA 2 cut(s) 243, 694
Bsp19I CCATGG 1 cut(s) 1432
BspACI CCGC 4 cut(s) 308, 429, 1026, 1341
BspANI GGCC 3 cut(s) 1152, 1542, 1664
BspCNI CTCAG 4 cut(s) 27, 1055, 1177, 1786
BspDI ATCGAT 1 cut(s) 497
BspHI TCATGA 1 cut(s) 853
BspLI GGNNCC 4 cut(s) 576, 645, 733, 1430
BspPI GGATC 2 cut(s) 1638, 1902
BspQI GCTCTTC 1 cut(s) 1725
BspT107I GGYRCC 1 cut(s) 731
BsrDI GCAATG 3 cut(s) 889, 952, 1101
BsrGI TGTACA 2 cut(s) 243, 694
BsrI ACTGG 1 cut(s) 73
BssECI CCNNGG 5 cut(s) 937, 1178, 1179, 1432, 1910
BssNI GRCGYC 1 cut(s) 987
BssT1I CCWWGG 2 cut(s) 937, 1432
Bst2UI CCWGG 1 cut(s) 790
Bst4CI ACNGT 5 cut(s) 736, 1053, 1461, 1703, 1745
Bst6I CTCTTC 2 cut(s) 1725, 1860
BstACI GRCGYC 1 cut(s) 987
BstAUI TGTACA 2 cut(s) 243, 694
BstBAI YACGTR 1 cut(s) 1333
BstC8I GCNNGC 2 cut(s) 950, 1161
BstDEI CTNAG 6 cut(s) 35, 1042, 1185, 1193, 1666, 1773
BstDSI CCRYGG 1 cut(s) 1432
BstF5I GGATG 5 cut(s) 391, 784, 832, 1861, 2028
BstH2I RGCGCY 1 cut(s) 141
BstHHI GCGC 1 cut(s) 140
BstMAI GTCTC 5 cut(s) 31, 67, 207, 837, 881
BstMCI CGRYCG 2 cut(s) 1153, 1747
BstMWI GCNNNNNNNGC 2 cut(s) 954, 1539
BstNI CCWGG 1 cut(s) 790
BstNSI RCATGY 1 cut(s) 1330
BstPAI GACNNNNGTC 1 cut(s) 216
BstSCI CCNGG 5 cut(s) 788, 1177, 1178, 1646, 1909
BstSNI TACGTA 1 cut(s) 1333
BstV1I GCAGC 3 cut(s) 127, 1781, 1907
BstV2I GAAGAC 1 cut(s) 439
BstX2I RGATCY 1 cut(s) 1894
BstXI CCANNNNNNTGG 1 cut(s) 1439
BstYI RGATCY 1 cut(s) 1894
BstZI CGGCCG 1 cut(s) 1150
Bsu15I ATCGAT 1 cut(s) 497
BsuI GTATCC 1 cut(s) 65
BsuRI GGCC 3 cut(s) 1152, 1542, 1664
BsuTUI ATCGAT 1 cut(s) 497
BtgI CCRYGG 1 cut(s) 1432
BtsCI GGATG 5 cut(s) 391, 784, 832, 1861, 2028
BtsIMutI CAGTG 1 cut(s) 559
Cac8I GCNNGC 2 cut(s) 950, 1161
CaiI CAGNNNCTG 2 cut(s) 34, 1780
CciI TCATGA 1 cut(s) 853
CfoI GCGC 1 cut(s) 140
Cfr13I GGNCC 1 cut(s) 22
Cfr9I CCCGGG 1 cut(s) 1178
ClaI ATCGAT 1 cut(s) 497
CseI GACGC 1 cut(s) 458
Csp6I GTAC 4 cut(s) 244, 695, 732, 1330
CviQI GTAC 4 cut(s) 244, 695, 732, 1330
DdeI CTNAG 6 cut(s) 35, 1042, 1185, 1193, 1666, 1773
EaeI YGGCCR 1 cut(s) 1150
EagI CGGCCG 1 cut(s) 1150
Eam1104I CTCTTC 2 cut(s) 1725, 1860
EarI CTCTTC 2 cut(s) 1725, 1860
EclXI CGGCCG 1 cut(s) 1150
Eco105I TACGTA 1 cut(s) 1333
Eco130I CCWWGG 2 cut(s) 937, 1432
Eco147I AGGCCT 1 cut(s) 1664
Eco24I GRGCYC 1 cut(s) 1231
Eco47I GGWCC 1 cut(s) 22
Eco47III AGCGCT 1 cut(s) 139
Eco52I CGGCCG 1 cut(s) 1150
Eco57I CTGAAG 4 cut(s) 11, 540, 1185, 1953
Eco88I CYCGRG 2 cut(s) 214, 1178
EcoO109I RGGNCCY 1 cut(s) 22
EcoRI GAATTC 1 cut(s) 1248
EcoRII CCWGG 1 cut(s) 788
EcoT14I CCWWGG 2 cut(s) 937, 1432
EcoT22I ATGCAT 1 cut(s) 1213
EcoT38I GRGCYC 1 cut(s) 1231
ErhI CCWWGG 2 cut(s) 937, 1432
FalI AAGNNNNNCTT 2 cut(s) 1258, 1290
FauI CCCGC 1 cut(s) 1019
FbaI TGATCA 3 cut(s) 102, 192, 1383
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 4 cut(s) 8, 141, 1770, 1921
FokI GGATG 5 cut(s) 398, 791, 839, 1868, 2035
FriOI GRGCYC 1 cut(s) 1231
Fsp4HI GCNGC 4 cut(s) 8, 141, 1770, 1921
FspBI CTAG 7 cut(s) 59, 1202, 1359, 1607, 1734, 1790, 1839
GlaI GCGC 1 cut(s) 139
GluI GCNGC 4 cut(s) 8, 141, 1770, 1921
GsaI CCCAGC 1 cut(s) 882
HaeII RGCGCY 1 cut(s) 141
HaeIII GGCC 3 cut(s) 1152, 1542, 1664
HapII CCGG 5 cut(s) 507, 1179, 1539, 1647, 1910
HgaI GACGC 1 cut(s) 458
HhaI GCGC 1 cut(s) 140
Hin1I GRCGYC 1 cut(s) 987
Hin6I GCGC 1 cut(s) 138
HinP1I GCGC 1 cut(s) 138
HincII GTYRAC 2 cut(s) 211, 739
HindII GTYRAC 2 cut(s) 211, 739
HindIII AAGCTT 3 cut(s) 946, 1513, 1563
HinfI GANTC 3 cut(s) 212, 928, 1362
HpaII CCGG 5 cut(s) 507, 1179, 1539, 1647, 1910
HphI GGTGA 2 cut(s) 878, 953
Hpy166II GTNNAC 4 cut(s) 211, 301, 677, 739
Hpy188I TCNGA 9 cut(s) 30, 155, 294, 369, 474, 520, 1045, 1388, 1776
Hpy188III TCNNGA 6 cut(s) 133, 342, 854, 1307, 1697, 1734
Hpy8I GTNNAC 4 cut(s) 211, 301, 677, 739
Hpy99I CGWCG 2 cut(s) 986, 989
HpyCH4III ACNGT 5 cut(s) 736, 1053, 1461, 1703, 1745
HpyCH4IV ACGT 6 cut(s) 287, 528, 896, 987, 1332, 1505
HpyF10VI GCNNNNNNNGC 2 cut(s) 954, 1539
HpyF3I CTNAG 6 cut(s) 35, 1042, 1185, 1193, 1666, 1773
HpySE526I ACGT 6 cut(s) 287, 528, 896, 987, 1332, 1505
Hsp92I GRCGYC 1 cut(s) 987
HspAI GCGC 1 cut(s) 138
KpnI GGTACC 1 cut(s) 735
Ksp22I TGATCA 3 cut(s) 102, 192, 1383
LguI GCTCTTC 1 cut(s) 1725
LmnI GCTCC 3 cut(s) 1428, 1577, 1917
Lsp1109I GCAGC 3 cut(s) 127, 1781, 1907
LweI GCATC 6 cut(s) 243, 319, 403, 456, 1198, 1328
MaeI CTAG 7 cut(s) 59, 1202, 1359, 1607, 1734, 1790, 1839
MaeII ACGT 6 cut(s) 287, 528, 896, 987, 1332, 1505
MaeIII GTNAC 6 cut(s) 484, 586, 617, 913, 1501, 1546
MboII GAAGA 6 cut(s) 444, 761, 1712, 1877, 1915, 1946
MflI RGATCY 1 cut(s) 1894
MhlI GDGCHC 2 cut(s) 1231, 1720
MlyI GAGTC 2 cut(s) 206, 1371
MmeI TCCRAC 5 cut(s) 552, 987, 1764, 1825, 1986
Mph1103I ATGCAT 1 cut(s) 1213
MroXI GAANNNNTTC 1 cut(s) 648
MseI TTAA 4 cut(s) 666, 1287, 1511, 2015
MslI CAYNNNNRTG 2 cut(s) 657, 1352
MspI CCGG 5 cut(s) 507, 1179, 1539, 1647, 1910
MspR9I CCNGG 5 cut(s) 790, 1179, 1180, 1648, 1911
Mva1269I GAATGC 2 cut(s) 10, 1161
MvaI CCWGG 1 cut(s) 790
MwoI GCNNNNNNNGC 2 cut(s) 954, 1539
NciI CCSGG 4 cut(s) 1179, 1180, 1648, 1911
NcoI CCATGG 1 cut(s) 1432
NlaIV GGNNCC 4 cut(s) 576, 645, 733, 1430
NmuCI GTSAC 4 cut(s) 586, 617, 1501, 1546
NsiI ATGCAT 1 cut(s) 1213
NspI RCATGY 1 cut(s) 1330
PagI TCATGA 1 cut(s) 853
PceI AGGCCT 1 cut(s) 1664
PciI ACATGT 1 cut(s) 1326
PciSI GCTCTTC 1 cut(s) 1725
PctI GAATGC 2 cut(s) 10, 1161
PdmI GAANNNNTTC 1 cut(s) 648
PfeI GAWTC 1 cut(s) 928
PflFI GACNNNGTC 2 cut(s) 743, 986
PflMI CCANNNNNTGG 3 cut(s) 653, 1581, 1984
PfoI TCCNGGA 2 cut(s) 788, 1646
PkrI GCNGC 4 cut(s) 9, 142, 1771, 1922
PleI GAGTC 2 cut(s) 206, 1370
PpsI GAGTC 2 cut(s) 206, 1370
Ppu21I YACGTR 1 cut(s) 1333
PpuMI RGGWCCY 1 cut(s) 22
PscI ACATGT 1 cut(s) 1326
PshAI GACNNNNGTC 1 cut(s) 216
Psp1406I AACGTT 1 cut(s) 528
Psp5II RGGWCCY 1 cut(s) 22
Psp6I CCWGG 1 cut(s) 788
PspFI CCCAGC 1 cut(s) 878
PspGI CCWGG 1 cut(s) 788
PspN4I GGNNCC 4 cut(s) 576, 645, 733, 1430
PspPI GGNCC 1 cut(s) 22
PspPPI RGGWCCY 1 cut(s) 22
PsrI GAACNNNNNNTAC 2 cut(s) 104, 136
PstNI CAGNNNCTG 2 cut(s) 34, 1780
PsuI RGATCY 1 cut(s) 1894
PsyI GACNNNGTC 2 cut(s) 743, 986
RsaI GTAC 4 cut(s) 245, 696, 733, 1331
RsaNI GTAC 4 cut(s) 244, 695, 732, 1330
RseI CAYNNNNRTG 2 cut(s) 657, 1352
SalI GTCGAC 1 cut(s) 209
SapI GCTCTTC 1 cut(s) 1725
SaqAI TTAA 4 cut(s) 666, 1287, 1511, 2015
SatI GCNGC 4 cut(s) 8, 141, 1770, 1921
Sau96I GGNCC 1 cut(s) 22
SchI GAGTC 2 cut(s) 206, 1371
ScrFI CCNGG 5 cut(s) 790, 1179, 1180, 1648, 1911
SduI GDGCHC 2 cut(s) 1231, 1720
SfaNI GCATC 6 cut(s) 243, 319, 403, 456, 1198, 1328
SinI GGWCC 1 cut(s) 22
SmaI CCCGGG 1 cut(s) 1180
SmiMI CAYNNNNRTG 2 cut(s) 657, 1352
SmlI CTYRAG 1 cut(s) 1232
SmoI CTYRAG 1 cut(s) 1232
SnaBI TACGTA 1 cut(s) 1333
SseBI AGGCCT 1 cut(s) 1664
SsiI CCGC 4 cut(s) 308, 429, 1026, 1341
SspI AATATT 2 cut(s) 796, 2012
SspMI CTAG 7 cut(s) 59, 1202, 1359, 1607, 1734, 1790, 1839
StuI AGGCCT 1 cut(s) 1664
StyD4I CCNGG 5 cut(s) 788, 1177, 1178, 1646, 1909
StyI CCWWGG 2 cut(s) 937, 1432
TaaI ACNGT 5 cut(s) 736, 1053, 1461, 1703, 1745
TaiI ACGT 6 cut(s) 290, 531, 899, 990, 1335, 1508
TaqI TCGA 8 cut(s) 132, 185, 210, 497, 747, 1416, 1596, 1642
TaqII GACCGA 1 cut(s) 1565
TatI WGTACW 2 cut(s) 243, 694
TfiI GAWTC 1 cut(s) 928
Tru1I TTAA 4 cut(s) 666, 1287, 1511, 2015
Tru9I TTAA 4 cut(s) 666, 1287, 1511, 2015
TscAI CASTG 1 cut(s) 559
TseFI GTSAC 4 cut(s) 586, 617, 1501, 1546
TseI GCWGC 4 cut(s) 7, 140, 1769, 1920
Tsp45I GTSAC 4 cut(s) 586, 617, 1501, 1546
TspMI CCCGGG 1 cut(s) 1178
TspRI CASTG 1 cut(s) 559
Tth111I GACNNNGTC 2 cut(s) 743, 986
Van91I CCANNNNNTGG 3 cut(s) 653, 1581, 1984
VpaK11BI GGWCC 1 cut(s) 22
XapI RAATTY 4 cut(s) 627, 1248, 1737, 1763
XbaI TCTAGA 1 cut(s) 1733
XceI RCATGY 1 cut(s) 1330
XmaI CCCGGG 1 cut(s) 1178
XmiI GTMKAC 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 648
XspI CTAG 7 cut(s) 59, 1202, 1359, 1607, 1734, 1790, 1839
ZraI GACGTC 1 cut(s) 988
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.