pycom14g07240

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0012639
Physical Location & Seq
Forward (+)
7274931 .. 7276781
1851 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g07240.1

Sequence Viewer

Length: 1851 bp
ATGCTGTGGAATTTAATGATGAAGTCCCATGTCGAATGCGGTCTTGTTGATTCGGCTCTGTTGCTGTACAAGAAGATGCGTGAGTTGGGTGTTTCGCATGATTGCTTTACGTTCCCGATTGTAAACAGGGTGGTTATGTTGCTTGGGGGTGAAGTTGGGTATGCAGGAATGGTTCACTGTGTGGCAATTCAAATGGGTTTTGGAATGGATGTGTATTTTGGTAATACAATGATTGATTTTTATGTGAAATGCGGAGCAATTGATCATGCTCGTATGTTGTTTGATGAAATGTGTCAAAGAGATTTGGTTTCTTGGACATCGATGATTTCCGGGTATGTTTCGGGGGGGAATGTTGCCTGTGGGTTGAGCTTGTTCAATGAAATGAGGTTGGAGTTGGAACCGAATTCCGTTACTATGTTGATCATGTTGCAAGGATGTTGTGGCACTGAAAGTGCAATATGTGGAAGTCAATTTCATGGTTATGTGATTAAGAATGGTTTGCTGTATGATGCATCTGTGCAGAACTCAATCTTGAGAATGTATGCTAAATTAGGTACAATCAACGAAGTTGAAGGCTTTTTCAGCGAACTTGATAGAAGGGATGTCGTCTCCTGGAATATCTGCATTTCGATTTTTTCTTCGAGAGGGGATGTTGCGAAAGTAAGAGAGTTGTTCAATGATATGCAGGGCAAAGTGGCGCCGGGCGTTGAGACATTAACTTTGGTTATATCAGCATTGGCCAAACATGGGATTCTTTCCCAAGGTGAAAGCTTGCATTGTTTGGCGACAAAACGTGGGCTTTGTGATCACGTTTTGCAGACATCTTTGTTAGACCTCTATGCCAAGTGTGGAGAATTAGGAATCTCAGATAGGCTGTTCAGAGAAATCCCTCACAGGAACACCATTACGTGGGGTGCAATGATGTTTGGCTTCATTCAAAATGGTTGGTTTAATGAAGCTGTTGGACTGTTACGCGAAATGCAAGCTTCGGGTCCGGAACCAGGGGTTGAGATACTAAGAAGCCTCGTTGATGCATTTGCAAACCTAGGTGCTTTGAAGTTGGGAAAACAAATTCATGGCTATATCATAAGGAAATCATTGTATGAAGGCGATGAAAGCTATACTCATCTCGAAACCTCCATAATAAACATGTACATAAGATGTGGTAGCCTATCTGCAGCTAGAGTGTGTTTTGATAGAATGTTGGTCAAAGATATAGTGACTTGGACATCAATGATTGAGGGCTATGGGAGCCACGGACTTGGTTTTGAAGCCTTGAAACTTTTTGACCTGATGATTAGAGAAGGAATAAGACCAAATAGTGTCACCTTCGTAAGCTTGTTATCTGCTTGTAGCCATTCCGGTCTTGTGACTGAAGGTTGTGATGCTTTTTGTTCCATGAAATGGAAGTTTGGTATCGAACCTGATTTAGACCATTACACTAGCATTGTCGATCTCTTGGGTCGATCTGGGAAGCTTAAAGAGGCCTTAGCTGTCATTATGAAAATGATGACTTTTCCGGATAGTAGGATTTGGGGTGCTCTTCTTTCAGGATGTAGAATTTACAGTCTCAGAGATGTTGGGGAGTATGCTGCTCAGAGGCTCTTGGAACTAGAACCTGATAACGCTGGGTACCATACTCTGTTGAGTAACACACAAGCTAGTGTTGGACAGTGGGATGAAGTAGAAGAGACGAGGAGAGTTATGAGCGAGATGGATCTAAAGAAGATGCCAGGGTGGAGCTGCATTGAGGCTGAAGGAAGAATTTATGGGTTTGTTTCGGGAGATAGATCACACCATCAAGTGGAGGAAATTTATGAAGTATTGGAATGTCTATGCAGGATGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

617

Amino Acids

68.69

Weight (kDa)

5.51

Isoelectric Point (pI)

31.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 101 - 147 2.9e-09 PPR repeat family
PPR_2 PF13041 200 - 248 4.6e-07 PPR repeat family
PPR_2 PF13041 404 - 452 1.4e-12 PPR repeat family
PPR PF01535 407 - 437 4.6e-09 PPR repeat
E_motif PF20431 523 - 584 5.1e-15 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012639)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g24950
malus_domestica MD05G1013600.v1.1 MD14G1083400.v1.1
prunus_persica Prupe.7G047100_v2.0.a1
pyrus_communis pycom14g07240
rosa_chinensis RchiOBHm_Chr2g0124611
rosa_laevigata RLG00000018808
rosa_multiflora Rmu_sc0005597.1_g000009
rosa_roxburghii Rroxscaffold_2G00119840
rosa_rugosa Rorug02G0251600 Rorug02G0251700
rosa_samantha Rh2AG310300 Rh2AG310400 Rh2BG318800 Rh2CG297200 Rh2CG302100 Rh2DG334000
rosa_wichuraiana Rw0G009400 Rw2G025100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1632
AccB1I GGYRCC 2 cut(s) 697, 1632
AccB7I CCANNNNNTGG 3 cut(s) 909, 1404, 1804
AccII CGCG 1 cut(s) 975
AccIII TCCGGA 2 cut(s) 994, 1519
AciI CCGC 2 cut(s) 39, 252
AclWI GGATC 1 cut(s) 1725
AcoI YGGCCR 1 cut(s) 738
AcsI RAATTY 6 cut(s) 10, 403, 1071, 1560, 1764, 1812
AcuI CTGAAG 2 cut(s) 1395, 1776
AcyI GRCGYC 1 cut(s) 698
AdeI CACNNNGTG 1 cut(s) 181
AfaI GTAC 4 cut(s) 68, 556, 1154, 1634
AfiI CCNNNNNNNGG 5 cut(s) 747, 909, 1001, 1404, 1804
AflIII ACRYGT 1 cut(s) 1149
AgsI TTSAA 8 cut(s) 191, 376, 572, 676, 938, 1057, 1271, 1279
AjnI CCWGG 3 cut(s) 611, 1000, 1732
Alw21I GWGCWC 1 cut(s) 1543
Alw26I GTCTC 4 cut(s) 613, 704, 1574, 1685
AlwI GGATC 1 cut(s) 1725
Aor13HI TCCGGA 2 cut(s) 994, 1519
AoxI GGCC 2 cut(s) 738, 1485
ApeKI GCWGC 3 cut(s) 1178, 1592, 1743
ApoI RAATTY 6 cut(s) 10, 403, 1071, 1560, 1764, 1812
ArsI GACNNNNNNTTYG 2 cut(s) 703, 735
Asp718I GGTACC 1 cut(s) 1632
AspA2I CCTAGG 1 cut(s) 1045
AspLEI GCGC 1 cut(s) 700
AspS9I GGNCC 1 cut(s) 992
AsuC2I CCSGG 2 cut(s) 331, 702
AsuHPI GGTGA 3 cut(s) 161, 776, 1318
AvaII GGWCC 1 cut(s) 992
AvrII CCTAGG 1 cut(s) 1045
BalI TGGCCA 1 cut(s) 740
BanI GGYRCC 2 cut(s) 697, 1632
Bbv12I GWGCWC 1 cut(s) 1543
BbvI GCAGC 3 cut(s) 1190, 1579, 1730
BccI CCATC 2 cut(s) 1708, 1806
BciT130I CCWGG 3 cut(s) 613, 1002, 1734
BclI TGATCA 3 cut(s) 262, 420, 805
BcnI CCSGG 2 cut(s) 331, 702
BcoDI GTCTC 4 cut(s) 613, 704, 1574, 1685
BfaI CTAG 5 cut(s) 1046, 1182, 1443, 1613, 1662
BfmI CTRYAG 1 cut(s) 1176
BfoI RGCGCY 1 cut(s) 701
BisI GCNGC 3 cut(s) 1179, 1593, 1744
BlnI CCTAGG 1 cut(s) 1045
BlsI GCNGC 3 cut(s) 1180, 1594, 1745
Bme1390I CCNGG 5 cut(s) 331, 613, 702, 1002, 1734
Bme18I GGWCC 1 cut(s) 992
BmgT120I GGNCC 1 cut(s) 992
BmiI GGNNCC 6 cut(s) 399, 699, 993, 999, 1253, 1634
BmrFI CCNGG 5 cut(s) 331, 613, 702, 1002, 1734
BmsI GCATC 7 cut(s) 66, 499, 521, 1021, 1375, 1719, 1833
Bpu10I CCTNAGC 1 cut(s) 1489
BpuEI CTTGAG 1 cut(s) 553
BpuMI CCSGG 2 cut(s) 331, 702
Bsa29I ATCGAT 1 cut(s) 320
BsaAI YACGTR 1 cut(s) 909
BsaHI GRCGYC 1 cut(s) 698
BsaJI CCNNGG 5 cut(s) 760, 1001, 1045, 1255, 1733
BsaWI WCCGGW 3 cut(s) 994, 1361, 1519
Bsc4I CCNNNNNNNGG 5 cut(s) 747, 909, 1001, 1404, 1804
Bse3DI GCAATG 1 cut(s) 924
BseAI TCCGGA 2 cut(s) 994, 1519
BseBI CCWGG 3 cut(s) 613, 1002, 1734
BseCI ATCGAT 1 cut(s) 320
BseDI CCNNGG 5 cut(s) 760, 1001, 1045, 1255, 1733
BseGI GGATG 7 cut(s) 214, 440, 607, 655, 1559, 1684, 1848
BseLI CCNNNNNNNGG 5 cut(s) 747, 909, 1001, 1404, 1804
BseMI GCAATG 1 cut(s) 924
BseMII CTCAG 3 cut(s) 879, 1585, 1610
BseRI GAGGAG 1 cut(s) 1711
BseXI GCAGC 3 cut(s) 1190, 1579, 1730
BseYI CCCAGC 1 cut(s) 1628
BsgI GTGCAG 1 cut(s) 539
Bsh1236I CGCG 1 cut(s) 975
BshFI GGCC 2 cut(s) 740, 1487
BshNI GGYRCC 2 cut(s) 697, 1632
BshVI ATCGAT 1 cut(s) 320
BsiHKAI GWGCWC 1 cut(s) 1543
BsiSI CCGG 5 cut(s) 330, 701, 995, 1362, 1520
BslFI GGGAC 1 cut(s) 10
BslI CCNNNNNNNGG 5 cut(s) 747, 909, 1001, 1404, 1804
BsmAI GTCTC 4 cut(s) 613, 704, 1574, 1685
BsmBI CGTCTC 2 cut(s) 613, 1685
BsmFI GGGAC 1 cut(s) 10
BsmI GAATGC 1 cut(s) 41
BsnI GGCC 2 cut(s) 740, 1487
Bsp1286I GDGCHC 1 cut(s) 1543
Bsp13I TCCGGA 2 cut(s) 994, 1519
Bsp1407I TGTACA 2 cut(s) 66, 1152
Bsp143I GATC 7 cut(s) 262, 420, 805, 1453, 1466, 1717, 1790
BspACI CCGC 2 cut(s) 39, 252
BspANI GGCC 2 cut(s) 740, 1487
BspCNI CTCAG 3 cut(s) 878, 1584, 1609
BspDI ATCGAT 1 cut(s) 320
BspEI TCCGGA 2 cut(s) 994, 1519
BspFNI CGCG 1 cut(s) 975
BspLI GGNNCC 6 cut(s) 399, 699, 993, 999, 1253, 1634
BspMAI CTGCAG 1 cut(s) 1180
BspPI GGATC 1 cut(s) 1725
BspQI GCTCTTC 1 cut(s) 1548
BspT107I GGYRCC 2 cut(s) 697, 1632
BsrDI GCAATG 1 cut(s) 924
BsrGI TGTACA 2 cut(s) 66, 1152
BssECI CCNNGG 5 cut(s) 760, 1001, 1045, 1255, 1733
BssMI GATC 7 cut(s) 262, 420, 805, 1453, 1466, 1717, 1790
BssNI GRCGYC 1 cut(s) 698
BssT1I CCWWGG 2 cut(s) 760, 1045
Bst2UI CCWGG 3 cut(s) 613, 1002, 1734
Bst4CI ACNGT 4 cut(s) 179, 969, 1568, 1674
Bst6I CTCTTC 2 cut(s) 1548, 1683
BstACI GRCGYC 1 cut(s) 698
BstAUI TGTACA 2 cut(s) 66, 1152
BstBAI YACGTR 1 cut(s) 909
BstC8I GCNNGC 2 cut(s) 773, 984
BstDEI CTNAG 5 cut(s) 865, 1016, 1489, 1571, 1596
BstDSI CCRYGG 1 cut(s) 1255
BstF5I GGATG 7 cut(s) 214, 440, 607, 655, 1559, 1684, 1848
BstFNI CGCG 1 cut(s) 975
BstH2I RGCGCY 1 cut(s) 701
BstHHI GCGC 1 cut(s) 700
BstKTI GATC 7 cut(s) 265, 423, 808, 1456, 1469, 1720, 1793
BstMAI GTCTC 4 cut(s) 613, 704, 1574, 1685
BstMBI GATC 7 cut(s) 262, 420, 805, 1453, 1466, 1717, 1790
BstMWI GCNNNNNNNGC 3 cut(s) 582, 1116, 1251
BstNI CCWGG 3 cut(s) 613, 1002, 1734
BstNSI RCATGY 1 cut(s) 1153
BstSCI CCNGG 5 cut(s) 329, 611, 700, 1000, 1732
BstSFI CTRYAG 1 cut(s) 1176
BstUI CGCG 1 cut(s) 975
BstV1I GCAGC 3 cut(s) 1190, 1579, 1730
BstX2I RGATCY 1 cut(s) 1717
BstXI CCANNNNNNTGG 1 cut(s) 1262
BstYI RGATCY 1 cut(s) 1717
Bsu15I ATCGAT 1 cut(s) 320
BsuRI GGCC 2 cut(s) 740, 1487
BsuTUI ATCGAT 1 cut(s) 320
BtgI CCRYGG 1 cut(s) 1255
BtgZI GCGATG 1 cut(s) 1125
BtsCI GGATG 7 cut(s) 214, 440, 607, 655, 1559, 1684, 1848
BtsIMutI CAGTG 3 cut(s) 175, 444, 1679
Cac8I GCNNGC 2 cut(s) 773, 984
CfoI GCGC 1 cut(s) 700
Cfr13I GGNCC 1 cut(s) 992
ClaI ATCGAT 1 cut(s) 320
Csp6I GTAC 4 cut(s) 67, 555, 1153, 1633
CviAII CATG 9 cut(s) 29, 98, 266, 424, 476, 746, 1076, 1150, 1399
CviQI GTAC 4 cut(s) 67, 555, 1153, 1633
DdeI CTNAG 5 cut(s) 865, 1016, 1489, 1571, 1596
DinI GGCGCC 1 cut(s) 699
DpnI GATC 7 cut(s) 264, 422, 807, 1455, 1468, 1719, 1792
DpnII GATC 7 cut(s) 262, 420, 805, 1453, 1466, 1717, 1790
DraIII CACNNNGTG 1 cut(s) 181
EaeI YGGCCR 1 cut(s) 738
Eam1104I CTCTTC 2 cut(s) 1548, 1683
EarI CTCTTC 2 cut(s) 1548, 1683
Eco130I CCWWGG 2 cut(s) 760, 1045
Eco147I AGGCCT 1 cut(s) 1487
Eco47I GGWCC 1 cut(s) 992
Eco57I CTGAAG 2 cut(s) 1395, 1776
EcoRI GAATTC 1 cut(s) 403
EcoRII CCWGG 3 cut(s) 611, 1000, 1732
EcoT14I CCWWGG 2 cut(s) 760, 1045
EcoT22I ATGCAT 2 cut(s) 514, 1036
EgeI GGCGCC 1 cut(s) 699
EheI GGCGCC 1 cut(s) 699
ErhI CCWWGG 2 cut(s) 760, 1045
Esp3I CGTCTC 2 cut(s) 613, 1685
FaeI CATG 9 cut(s) 32, 101, 269, 427, 479, 749, 1079, 1153, 1402
FaqI GGGAC 1 cut(s) 10
FatI CATG 9 cut(s) 28, 97, 265, 423, 475, 745, 1075, 1149, 1398
FbaI TGATCA 3 cut(s) 262, 420, 805
Fnu4HI GCNGC 3 cut(s) 1179, 1593, 1744
FokI GGATG 6 cut(s) 221, 447, 614, 662, 1566, 1691
Fsp4HI GCNGC 3 cut(s) 1179, 1593, 1744
FspBI CTAG 5 cut(s) 1046, 1182, 1443, 1613, 1662
GlaI GCGC 1 cut(s) 699
GluI GCNGC 3 cut(s) 1179, 1593, 1744
GsaI CCCAGC 1 cut(s) 1632
HaeII RGCGCY 1 cut(s) 701
HaeIII GGCC 2 cut(s) 740, 1487
HapII CCGG 5 cut(s) 330, 701, 995, 1362, 1520
HhaI GCGC 1 cut(s) 700
Hin1I GRCGYC 1 cut(s) 698
Hin1II CATG 9 cut(s) 32, 101, 269, 427, 479, 749, 1079, 1153, 1402
Hin6I GCGC 1 cut(s) 698
HinP1I GCGC 1 cut(s) 698
HindIII AAGCTT 4 cut(s) 769, 984, 1336, 1475
HinfI GANTC 3 cut(s) 50, 751, 861
HpaII CCGG 5 cut(s) 330, 701, 995, 1362, 1520
HphI GGTGA 3 cut(s) 161, 776, 1318
Hpy166II GTNNAC 2 cut(s) 124, 175
Hpy188I TCNGA 4 cut(s) 868, 881, 1574, 1599
Hpy188III TCNNGA 8 cut(s) 115, 532, 642, 995, 1130, 1520, 1551, 1782
Hpy8I GTNNAC 2 cut(s) 124, 175
HpyAV CCTTC 7 cut(s) 566, 591, 1100, 1298, 1339, 1370, 1751
HpyCH4III ACNGT 4 cut(s) 179, 969, 1568, 1674
HpyCH4IV ACGT 4 cut(s) 110, 793, 810, 908
HpyF10VI GCNNNNNNNGC 3 cut(s) 582, 1116, 1251
HpyF3I CTNAG 5 cut(s) 865, 1016, 1489, 1571, 1596
HpySE526I ACGT 4 cut(s) 110, 793, 810, 908
Hsp92I GRCGYC 1 cut(s) 698
Hsp92II CATG 9 cut(s) 32, 101, 269, 427, 479, 749, 1079, 1153, 1402
HspAI GCGC 1 cut(s) 698
KasI GGCGCC 1 cut(s) 697
Kpn2I TCCGGA 2 cut(s) 994, 1519
KpnI GGTACC 1 cut(s) 1636
Ksp22I TGATCA 3 cut(s) 262, 420, 805
Kzo9I GATC 7 cut(s) 262, 420, 805, 1453, 1466, 1717, 1790
LguI GCTCTTC 1 cut(s) 1548
LmnI GCTCC 3 cut(s) 254, 1251, 1740
Lsp1109I GCAGC 3 cut(s) 1190, 1579, 1730
LweI GCATC 7 cut(s) 66, 499, 521, 1021, 1375, 1719, 1833
MaeI CTAG 5 cut(s) 1046, 1182, 1443, 1613, 1662
MaeII ACGT 4 cut(s) 110, 793, 810, 908
MaeIII GTNAC 6 cut(s) 409, 969, 1219, 1324, 1369, 1649
MalI GATC 7 cut(s) 264, 422, 807, 1455, 1468, 1719, 1792
MboI GATC 7 cut(s) 262, 420, 805, 1453, 1466, 1717, 1790
MboII GAAGA 6 cut(s) 85, 630, 1535, 1700, 1738, 1773
MfeI CAATTG 1 cut(s) 258
MflI RGATCY 1 cut(s) 1717
MhlI GDGCHC 1 cut(s) 1543
MlsI TGGCCA 1 cut(s) 740
MluNI TGGCCA 1 cut(s) 740
Mly113I GGCGCC 1 cut(s) 698
MmeI TCCRAC 4 cut(s) 369, 375, 943, 1648
Mox20I TGGCCA 1 cut(s) 740
Mph1103I ATGCAT 2 cut(s) 514, 1036
MroI TCCGGA 2 cut(s) 994, 1519
MscI TGGCCA 1 cut(s) 740
MseI TTAA 5 cut(s) 14, 489, 716, 951, 1479
MslI CAYNNNNRTG 1 cut(s) 480
Msp20I TGGCCA 1 cut(s) 740
MspI CCGG 5 cut(s) 330, 701, 995, 1362, 1520
MspR9I CCNGG 5 cut(s) 331, 613, 702, 1002, 1734
MunI CAATTG 1 cut(s) 258
Mva1269I GAATGC 1 cut(s) 41
MvaI CCWGG 3 cut(s) 613, 1002, 1734
MvnI CGCG 1 cut(s) 975
MwoI GCNNNNNNNGC 3 cut(s) 582, 1116, 1251
NarI GGCGCC 1 cut(s) 698
NciI CCSGG 2 cut(s) 331, 702
NdeII GATC 7 cut(s) 262, 420, 805, 1453, 1466, 1717, 1790
NlaIII CATG 9 cut(s) 32, 101, 269, 427, 479, 749, 1079, 1153, 1402
NlaIV GGNNCC 6 cut(s) 399, 699, 993, 999, 1253, 1634
NmuCI GTSAC 3 cut(s) 1219, 1324, 1369
NsiI ATGCAT 2 cut(s) 514, 1036
NspI RCATGY 1 cut(s) 1153
PceI AGGCCT 1 cut(s) 1487
PciI ACATGT 1 cut(s) 1149
PciSI GCTCTTC 1 cut(s) 1548
PctI GAATGC 1 cut(s) 41
PfeI GAWTC 3 cut(s) 50, 751, 861
PflMI CCANNNNNTGG 3 cut(s) 909, 1404, 1804
PfoI TCCNGGA 1 cut(s) 611
PkrI GCNGC 3 cut(s) 1180, 1594, 1745
PluTI GGCGCC 1 cut(s) 701
Ppu21I YACGTR 1 cut(s) 909
PscI ACATGT 1 cut(s) 1149
Psp6I CCWGG 3 cut(s) 611, 1000, 1732
PspFI CCCAGC 1 cut(s) 1628
PspGI CCWGG 3 cut(s) 611, 1000, 1732
PspN4I GGNNCC 6 cut(s) 399, 699, 993, 999, 1253, 1634
PspPI GGNCC 1 cut(s) 992
PstI CTGCAG 1 cut(s) 1180
PsuI RGATCY 1 cut(s) 1717
RsaI GTAC 4 cut(s) 68, 556, 1154, 1634
RsaNI GTAC 4 cut(s) 67, 555, 1153, 1633
RseI CAYNNNNRTG 1 cut(s) 480
SapI GCTCTTC 1 cut(s) 1548
SaqAI TTAA 5 cut(s) 14, 489, 716, 951, 1479
SatI GCNGC 3 cut(s) 1179, 1593, 1744
Sau3AI GATC 7 cut(s) 262, 420, 805, 1453, 1466, 1717, 1790
Sau96I GGNCC 1 cut(s) 992
ScrFI CCNGG 5 cut(s) 331, 613, 702, 1002, 1734
SduI GDGCHC 1 cut(s) 1543
SfaNI GCATC 7 cut(s) 66, 499, 521, 1021, 1375, 1719, 1833
SfcI CTRYAG 1 cut(s) 1176
SfoI GGCGCC 1 cut(s) 699
SinI GGWCC 1 cut(s) 992
SmiMI CAYNNNNRTG 1 cut(s) 480
SmlI CTYRAG 1 cut(s) 532
SmoI CTYRAG 1 cut(s) 532
SseBI AGGCCT 1 cut(s) 1487
SsiI CCGC 2 cut(s) 39, 252
SspDI GGCGCC 1 cut(s) 697
SspMI CTAG 5 cut(s) 1046, 1182, 1443, 1613, 1662
StuI AGGCCT 1 cut(s) 1487
StyD4I CCNGG 5 cut(s) 329, 611, 700, 1000, 1732
StyI CCWWGG 2 cut(s) 760, 1045
TaaI ACNGT 4 cut(s) 179, 969, 1568, 1674
TaiI ACGT 4 cut(s) 113, 796, 813, 911
TaqI TCGA 8 cut(s) 33, 320, 629, 641, 1131, 1419, 1452, 1465
TatI WGTACW 2 cut(s) 66, 1152
TfiI GAWTC 3 cut(s) 50, 751, 861
Tru1I TTAA 5 cut(s) 14, 489, 716, 951, 1479
Tru9I TTAA 5 cut(s) 14, 489, 716, 951, 1479
TscAI CASTG 3 cut(s) 182, 451, 1679
TseFI GTSAC 3 cut(s) 1219, 1324, 1369
TseI GCWGC 3 cut(s) 1178, 1592, 1743
Tsp45I GTSAC 3 cut(s) 1219, 1324, 1369
TspGWI ACGGA 2 cut(s) 397, 1272
TspRI CASTG 3 cut(s) 182, 451, 1679
Van91I CCANNNNNTGG 3 cut(s) 909, 1404, 1804
VpaK11BI GGWCC 1 cut(s) 992
XapI RAATTY 6 cut(s) 10, 403, 1071, 1560, 1764, 1812
XceI RCATGY 1 cut(s) 1153
XmaJI CCTAGG 1 cut(s) 1045
XspI CTAG 5 cut(s) 1046, 1182, 1443, 1613, 1662
Zsp2I ATGCAT 2 cut(s) 514, 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.