Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0015150

Physical Location & Seq

Genomic Coordinates Forward (+)

10488091 .. 10489358

Gene Structure 1268 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G066700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 858 bp

ATGGAAAACTGCAGAAAATCTCCATTGAAGCCATGGAAGAAAGGCCCAACTAGAGGCAAAGGTGGCCCTCAGAACGCCTCATGTGAATACCGCGGCGTTCGGCAAAGAACTTGGGGCAAATGGGTTGCTGAAATCAGAGAACCAAAGAAGAGAACCAGGCTCTGGTTGGGCTCTTTTGCCACAGCAGAAGAAGCTGCCATGGCTTATGATGATGCTGCCAGGAGACTCTATGGTCCAGATGCTTTTCTCAATCTTCCTCACCTCCAAGCCAACTCCAATCCTGCACTCAAATCTCAAAAGTTCAAATGGTTCCCTTCCCAAAATTTCATTTCCATGTTTCCTTCTTGTGGTTTGCTCAATATTAATGCCCAACCAAGTGTTCATGTCATTCATCAGAGGCTCCAAGAACTTAAGCAAAATGGGGTTCTTGGTCAAACTACTCCGTCCTCTAGTTCTTCTTCCTGTGATTCTAAACCTGAGGTTCGCACCATAAGCGACAAAACACAGATGGGAAATGTTGCAGAGAAGGAGAAAGATGTAGAAATTTCATCAGAAAAAATTATTGAAGACAACCGGGAGAAGCCGCAGATTGATCTCAATGAGTTTCTTCAGCAACTGGGAGTACTGAAAAAAGAGAGACAGTCAGAGGCAATTGACACCACAGGAAATTTTGGAGTTCCAGAATCTTCAGTTACAGAACTTAATGATGAATTTGGACCCTTTGCTGACAAGAATTTCAATTGGGATGCATTGATTGAGATGCATGGGATTTCAGACCAAGGAGCAGATGCTGGTAGCTTTCAAGTTTATGATGTGAATGAAGAGCTGCCCTTCCCCACTTCTATTTGGGACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

286

Amino Acids

32.05

Weight (kDa)

5.73

Isoelectric Point (pI)

49.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015150)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57600
fragaria_vesca	FvH4_6g23290
malus_domestica	MD12G1067600.v1.1
prunus_persica	Prupe.7G066700_v2.0.a1
pyrus_communis	pycom12g05990 pycom14g05600
rosa_chinensis	RchiOBHm_Chr3g0481251
rosa_laevigata	RLG00000023409
rosa_multiflora	Rmu_co8499509.1_g000001 Rmu_sc0000064.1_g000006
rosa_roxburghii	Rroxscaffold_6G00400570
rosa_rugosa	Rorug03G0190600
rosa_samantha	Rh3AG241500 Rh3CG272100 Rh3DG268500
rosa_wichuraiana	Rw3G021570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	231
AccB7I	CCANNNNNTGG	1 cut(s)	162
AccII	CGCG	1 cut(s)	93
AciI	CCGC	3 cut(s)	91, 93, 584
AcsI	RAATTY	5 cut(s)	322, 543, 667, 710, 733
AcuI	CTGAAG	2 cut(s)	593, 672
AfaI	GTAC	1 cut(s)	624
AfiI	CCNNNNNNNGG	3 cut(s)	53, 162, 347
AflII	CTTAAG	1 cut(s)	410
AgsI	TTSAA	5 cut(s)	28, 304, 566, 739, 803
AjnI	CCWGG	2 cut(s)	155, 218
AjuI	GAANNNNNNNTTGG	2 cut(s)	363, 395
AluBI	AGCT	3 cut(s)	194, 798, 826
AluI	AGCT	3 cut(s)	194, 798, 826
Alw26I	GTCTC	2 cut(s)	217, 631
AlwNI	CAGNNNCTG	3 cut(s)	162, 616, 791
AoxI	GGCC	2 cut(s)	43, 64
ApeKI	GCWGC	3 cut(s)	194, 215, 826
ApoI	RAATTY	5 cut(s)	322, 543, 667, 710, 733
AseI	ATTAAT	1 cut(s)	363
AspS9I	GGNCC	4 cut(s)	44, 65, 233, 716
AsuC2I	CCSGG	1 cut(s)	575
AsuHPI	GGTGA	1 cut(s)	251
AvaII	GGWCC	2 cut(s)	233, 716
AxyI	CCTNAGG	1 cut(s)	477
BanII	GRGCYC	1 cut(s)	173
BbsI	GAAGAC	1 cut(s)	573
BbvI	GCAGC	3 cut(s)	181, 202, 813
BccI	CCATC	1 cut(s)	502
BciT130I	CCWGG	2 cut(s)	157, 220
BcnI	CCSGG	1 cut(s)	575
BcoDI	GTCTC	2 cut(s)	217, 631
BfaI	CTAG	2 cut(s)	51, 450
BfmI	CTRYAG	1 cut(s)	10
BfrI	CTTAAG	1 cut(s)	410
BisI	GCNGC	5 cut(s)	94, 195, 216, 584, 827
BlsI	GCNGC	5 cut(s)	95, 196, 217, 585, 828
BmcAI	AGTACT	1 cut(s)	624
Bme1390I	CCNGG	3 cut(s)	157, 220, 575
Bme18I	GGWCC	2 cut(s)	233, 716
BmgT120I	GGNCC	4 cut(s)	44, 65, 233, 716
BmiI	GGNNCC	3 cut(s)	311, 401, 718
BmrFI	CCNGG	3 cut(s)	157, 220, 575
BmrI	ACTGGG	1 cut(s)	626
BmsI	GCATC	5 cut(s)	202, 229, 736, 750, 778
BmuI	ACTGGG	1 cut(s)	626
BpiI	GAAGAC	1 cut(s)	573
BpuMI	CCSGG	1 cut(s)	575
BsaJI	CCNNGG	4 cut(s)	32, 91, 198, 778
Bsc4I	CCNNNNNNNGG	3 cut(s)	53, 162, 347
Bse1I	ACTGG	1 cut(s)	621
Bse21I	CCTNAGG	1 cut(s)	477
BseBI	CCWGG	2 cut(s)	157, 220
BseDI	CCNNGG	4 cut(s)	32, 91, 198, 778
BseGI	GGATG	1 cut(s)	751
BseLI	CCNNNNNNNGG	3 cut(s)	53, 162, 347
BseMII	CTCAG	2 cut(s)	83, 468
BseNI	ACTGG	1 cut(s)	621
BseXI	GCAGC	3 cut(s)	181, 202, 813
BsgI	GTGCAG	1 cut(s)	267
Bsh1236I	CGCG	1 cut(s)	93
BshFI	GGCC	2 cut(s)	45, 66
BsiSI	CCGG	1 cut(s)	574
BslI	CCNNNNNNNGG	3 cut(s)	53, 162, 347
BsmAI	GTCTC	2 cut(s)	217, 631
BsnI	GGCC	2 cut(s)	45, 66
Bsp1286I	GDGCHC	1 cut(s)	173
Bsp143I	GATC	1 cut(s)	592
Bsp19I	CCATGG	2 cut(s)	32, 198
BspACI	CCGC	3 cut(s)	91, 93, 584
BspANI	GGCC	2 cut(s)	45, 66
BspCNI	CTCAG	2 cut(s)	82, 469
BspFNI	CGCG	1 cut(s)	93
BspLI	GGNNCC	3 cut(s)	311, 401, 718
BspMAI	CTGCAG	1 cut(s)	14
BspQI	GCTCTTC	1 cut(s)	816
BspTI	CTTAAG	1 cut(s)	410
BsrI	ACTGG	1 cut(s)	621
BssECI	CCNNGG	4 cut(s)	32, 91, 198, 778
BssMI	GATC	1 cut(s)	592
BssT1I	CCWWGG	3 cut(s)	32, 198, 778
Bst2UI	CCWGG	2 cut(s)	157, 220
Bst4CI	ACNGT	1 cut(s)	642
Bst6I	CTCTTC	2 cut(s)	143, 816
BstAFI	CTTAAG	1 cut(s)	410
BstDEI	CTNAG	2 cut(s)	69, 477
BstDSI	CCRYGG	3 cut(s)	32, 91, 198
BstF5I	GGATG	1 cut(s)	751
BstFNI	CGCG	1 cut(s)	93
BstKTI	GATC	1 cut(s)	595
BstMAI	GTCTC	2 cut(s)	217, 631
BstMBI	GATC	1 cut(s)	592
BstMWI	GCNNNNNNNGC	4 cut(s)	63, 191, 200, 492
BstNI	CCWGG	2 cut(s)	157, 220
BstSCI	CCNGG	3 cut(s)	155, 218, 573
BstSFI	CTRYAG	1 cut(s)	10
BstUI	CGCG	1 cut(s)	93
BstV1I	GCAGC	3 cut(s)	181, 202, 813
BstV2I	GAAGAC	1 cut(s)	573
Bsu36I	CCTNAGG	1 cut(s)	477
BsuRI	GGCC	2 cut(s)	45, 66
BtgI	CCRYGG	3 cut(s)	32, 91, 198
BtsCI	GGATG	1 cut(s)	751
CaiI	CAGNNNCTG	3 cut(s)	162, 616, 791
Cfr13I	GGNCC	4 cut(s)	44, 65, 233, 716
Cfr42I	CCGCGG	1 cut(s)	94
Csp6I	GTAC	1 cut(s)	623
CviAII	CATG	6 cut(s)	33, 81, 199, 334, 383, 764
CviQI	GTAC	1 cut(s)	623
DdeI	CTNAG	2 cut(s)	69, 477
DpnI	GATC	1 cut(s)	594
DpnII	GATC	1 cut(s)	592
DrdI	GACNNNNNNGTC	1 cut(s)	231
DseDI	GACNNNNNNGTC	1 cut(s)	231
Eam1104I	CTCTTC	2 cut(s)	143, 816
EarI	CTCTTC	2 cut(s)	143, 816
Eco130I	CCWWGG	3 cut(s)	32, 198, 778
Eco24I	GRGCYC	1 cut(s)	173
Eco47I	GGWCC	2 cut(s)	233, 716
Eco57I	CTGAAG	2 cut(s)	593, 672
Eco81I	CCTNAGG	1 cut(s)	477
EcoRII	CCWGG	2 cut(s)	155, 218
EcoT14I	CCWWGG	3 cut(s)	32, 198, 778
EcoT22I	ATGCAT	2 cut(s)	751, 765
EcoT38I	GRGCYC	1 cut(s)	173
ErhI	CCWWGG	3 cut(s)	32, 198, 778
FaeI	CATG	6 cut(s)	36, 84, 202, 337, 386, 767
FatI	CATG	6 cut(s)	32, 80, 198, 333, 382, 763
Fnu4HI	GCNGC	5 cut(s)	94, 195, 216, 584, 827
FokI	GGATG	1 cut(s)	758
FriOI	GRGCYC	1 cut(s)	173
Fsp4HI	GCNGC	5 cut(s)	94, 195, 216, 584, 827
FspBI	CTAG	2 cut(s)	51, 450
GluI	GCNGC	5 cut(s)	94, 195, 216, 584, 827
HaeIII	GGCC	2 cut(s)	45, 66
HapII	CCGG	1 cut(s)	574
Hin1II	CATG	6 cut(s)	36, 84, 202, 337, 386, 767
HinfI	GANTC	3 cut(s)	225, 467, 683
HpaII	CCGG	1 cut(s)	574
HphI	GGTGA	1 cut(s)	251
Hpy188I	TCNGA	6 cut(s)	72, 137, 396, 553, 646, 775
Hpy188III	TCNNGA	2 cut(s)	236, 680
HpyAV	CCTTC	4 cut(s)	324, 351, 520, 841
HpyCH4III	ACNGT	1 cut(s)	642
HpyCH4V	TGCA	5 cut(s)	12, 284, 521, 749, 763
HpyF10VI	GCNNNNNNNGC	4 cut(s)	63, 191, 200, 492
HpyF3I	CTNAG	2 cut(s)	69, 477
Hsp92II	CATG	6 cut(s)	36, 84, 202, 337, 386, 767
KspI	CCGCGG	1 cut(s)	94
Kzo9I	GATC	1 cut(s)	592
LguI	GCTCTTC	1 cut(s)	816
LmnI	GCTCC	2 cut(s)	405, 782
Lsp1109I	GCAGC	3 cut(s)	181, 202, 813
LweI	GCATC	5 cut(s)	202, 229, 736, 750, 778
MaeI	CTAG	2 cut(s)	51, 450
MaeIII	GTNAC	1 cut(s)	691
MalI	GATC	1 cut(s)	594
MboI	GATC	1 cut(s)	592
MfeI	CAATTG	2 cut(s)	651, 739
MhlI	GDGCHC	1 cut(s)	173
MluCI	AATT	8 cut(s)	322, 543, 558, 651, 667, 710, 733, 739
MlyI	GAGTC	1 cut(s)	219
MnlI	CCTC	9 cut(s)	47, 78, 88, 267, 272, 390, 457, 472, 640
Mph1103I	ATGCAT	2 cut(s)	751, 765
MseI	TTAA	3 cut(s)	363, 411, 702
MslI	CAYNNNNRTG	1 cut(s)	332
MspA1I	CMGCKG	1 cut(s)	93
MspCI	CTTAAG	1 cut(s)	410
MspI	CCGG	1 cut(s)	574
MspR9I	CCNGG	3 cut(s)	157, 220, 575
MunI	CAATTG	2 cut(s)	651, 739
MvaI	CCWGG	2 cut(s)	157, 220
MvnI	CGCG	1 cut(s)	93
MwoI	GCNNNNNNNGC	4 cut(s)	63, 191, 200, 492
NciI	CCSGG	1 cut(s)	575
NcoI	CCATGG	2 cut(s)	32, 198
NdeII	GATC	1 cut(s)	592
NlaIII	CATG	6 cut(s)	36, 84, 202, 337, 386, 767
NlaIV	GGNNCC	3 cut(s)	311, 401, 718
NsiI	ATGCAT	2 cut(s)	751, 765
PciSI	GCTCTTC	1 cut(s)	816
PfeI	GAWTC	2 cut(s)	467, 683
PflMI	CCANNNNNTGG	1 cut(s)	162
PkrI	GCNGC	5 cut(s)	95, 196, 217, 585, 828
PleI	GAGTC	1 cut(s)	219
PpsI	GAGTC	1 cut(s)	219
PshBI	ATTAAT	1 cut(s)	363
Psp6I	CCWGG	2 cut(s)	155, 218
PspGI	CCWGG	2 cut(s)	155, 218
PspN4I	GGNNCC	3 cut(s)	311, 401, 718
PspPI	GGNCC	4 cut(s)	44, 65, 233, 716
PstI	CTGCAG	1 cut(s)	14
PstNI	CAGNNNCTG	3 cut(s)	162, 616, 791
RsaI	GTAC	1 cut(s)	624
RsaNI	GTAC	1 cut(s)	623
RseI	CAYNNNNRTG	1 cut(s)	332
SacII	CCGCGG	1 cut(s)	94
SapI	GCTCTTC	1 cut(s)	816
SaqAI	TTAA	3 cut(s)	363, 411, 702
SatI	GCNGC	5 cut(s)	94, 195, 216, 584, 827
Sau3AI	GATC	1 cut(s)	592
Sau96I	GGNCC	4 cut(s)	44, 65, 233, 716
ScaI	AGTACT	1 cut(s)	624
SchI	GAGTC	1 cut(s)	219
ScrFI	CCNGG	3 cut(s)	157, 220, 575
SduI	GDGCHC	1 cut(s)	173
SetI	ASST	7 cut(s)	64, 196, 264, 478, 483, 800, 828
SfaNI	GCATC	5 cut(s)	202, 229, 736, 750, 778
SfcI	CTRYAG	1 cut(s)	10
Sfr303I	CCGCGG	1 cut(s)	94
SgrBI	CCGCGG	1 cut(s)	94
SinI	GGWCC	2 cut(s)	233, 716
SmiMI	CAYNNNNRTG	1 cut(s)	332
SmlI	CTYRAG	1 cut(s)	410
SmoI	CTYRAG	1 cut(s)	410
Sse9I	AATT	8 cut(s)	322, 543, 558, 651, 667, 710, 733, 739
SsiI	CCGC	3 cut(s)	91, 93, 584
SspI	AATATT	1 cut(s)	361
SspMI	CTAG	2 cut(s)	51, 450
StyD4I	CCNGG	3 cut(s)	155, 218, 573
StyI	CCWWGG	3 cut(s)	32, 198, 778
TaaI	ACNGT	1 cut(s)	642
TasI	AATT	8 cut(s)	322, 543, 558, 651, 667, 710, 733, 739
TatI	WGTACW	1 cut(s)	622
TauI	GCSGC	2 cut(s)	96, 586
TfiI	GAWTC	2 cut(s)	467, 683
Tru1I	TTAA	3 cut(s)	363, 411, 702
Tru9I	TTAA	3 cut(s)	363, 411, 702
TseI	GCWGC	3 cut(s)	194, 215, 826
TspDTI	ATGAA	6 cut(s)	316, 371, 380, 537, 723, 834
TspGWI	ACGGA	1 cut(s)	432
Van91I	CCANNNNNTGG	1 cut(s)	162
Vha464I	CTTAAG	1 cut(s)	410
VpaK11BI	GGWCC	2 cut(s)	233, 716
VspI	ATTAAT	1 cut(s)	363
XapI	RAATTY	5 cut(s)	322, 543, 667, 710, 733
XcmI	CCANNNNNNNNNTGG	2 cut(s)	30, 163
XspI	CTAG	2 cut(s)	51, 450
ZrmI	AGTACT	1 cut(s)	624
Zsp2I	ATGCAT	2 cut(s)	751, 765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.