Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009699

Physical Location & Seq

Genomic Coordinates Reverse (-)

13186995 .. 13188904

Gene Structure 1910 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G102000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 858 bp

ATGGAGGATTTGCCACCTGGGTTTAGATTCTACCCAACAGAGGAGGAGCTGGTTTCGTTTTATTTGCAGAAGAAACTGGAAGGGAGGAGGGAGGACTTGAACCGAGTCATGGACCGAGTCATACCTGTTCTTTACATATACGAGTATAATCCATCGGACCTCCCACAGTTTTCGGGAGAGGCCTGCCATGGAGATCCGGAGCAGTGGTTCTTCTTCATCCCAAGACAAGAGAGTGAAGCTCGAGGAGGGAGACCGAGGCGACTCACAACAACTGGGTATTGGAAAGCAACTGGGTCACCGAGTTTTGTTTACTCTTCCAATTCCAATCGAGCCATCGGCCTCAAAAGAACCATGGTTTTCTACAATGGTAGAGCTCCTCATGGAAGGAAAACCGAGTGGAAGATGAATGAATATAAAGCCATTGAAGCTCATCATGCAGATCAAAATCAACCATTGATTGCCTCTTCATCATCAAATACCCCTTCTGCTCCTACGTTGAGGCAAGAATTCAGTTTGTGCCGAGTGTACAAGAAATCAAAATGCCTGAGGGCATTCGACAGACGACCTCTAGGGGCGGAGATCATGAGCAACCCTAGTTTGAATTTGAATCAAACGGCTGCTGCTCATGAAGGTGCAGGTCATCAGGGTCAGGGTTCAGCATCACATAGCAGGAACCCCCTCATGGGTAGTGATCAGAGAACAAACTCAAGCTCACCAGAGAGTTCTTCCTCAGGAGATCATCATGGCCCTCAACCACCCTCTCAACCCGCAGGTGAAACTGGAACCTTGCCAATGTTCATTGATAATGAAGCACTTTGGGATTTGGAACAATTGATGATCAATAATAATTGGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

286

Amino Acids

32.12

Weight (kDa)

6.76

Isoelectric Point (pI)

59.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009699)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g19430
malus_domestica	MD12G1030200.v1.1 MD12G1030500.v1.1 MD14G1030700.v1.1 MD14G1030800.v1.1 MD14G1030900.v1.1 MD14G1031000.v1.1
prunus_persica	Prupe.7G102000_v2.0.a1
pyrus_communis	pycom12g02810 pycom12g02820 pycom14g02790
rosa_chinensis	RchiOBHm_Chr3g0474741
rosa_laevigata	RLG00000023900
rosa_multiflora	Rmu_co8258885.1_g000001 Rmu_sc0007062.1_g000020
rosa_roxburghii	Rroxscaffold_6G00406890
rosa_rugosa	Rorug03G0143000
rosa_samantha	Rh3AG193300 Rh3BG223100 Rh3CG217900 Rh3DG219100
rosa_wichuraiana	Rw3G017610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	761
Acc36I	ACCTGC	2 cut(s)	626, 761
AccIII	TCCGGA	1 cut(s)	196
AciI	CCGC	2 cut(s)	575, 768
AclWI	GGATC	1 cut(s)	188
AcsI	RAATTY	2 cut(s)	506, 601
AfaI	GTAC	1 cut(s)	527
AfiI	CCNNNNNNNGG	4 cut(s)	40, 109, 682, 683
AgsI	TTSAA	4 cut(s)	100, 425, 601, 607
AjnI	CCWGG	1 cut(s)	16
AloI	GAACNNNNNNTCC	2 cut(s)	191, 223
AluBI	AGCT	5 cut(s)	49, 239, 374, 428, 711
AluI	AGCT	5 cut(s)	49, 239, 374, 428, 711
Alw21I	GWGCWC	1 cut(s)	376
Alw26I	GTCTC	1 cut(s)	244
AlwI	GGATC	1 cut(s)	188
Ama87I	CYCGRG	1 cut(s)	240
Aor13HI	TCCGGA	1 cut(s)	196
AoxI	GGCC	3 cut(s)	180, 337, 745
ApeKI	GCWGC	2 cut(s)	617, 620
ApoI	RAATTY	2 cut(s)	506, 601
AspS9I	GGNCC	3 cut(s)	112, 157, 746
AsuHPI	GGTGA	3 cut(s)	288, 705, 785
AvaI	CYCGRG	1 cut(s)	240
AvaII	GGWCC	2 cut(s)	112, 157
AxyI	CCTNAGG	2 cut(s)	545, 730
BanII	GRGCYC	1 cut(s)	376
Bbv12I	GWGCWC	1 cut(s)	376
BbvI	GCAGC	2 cut(s)	604, 607
BccI	CCATC	2 cut(s)	160, 341
BceAI	ACGGC	1 cut(s)	630
BciT130I	CCWGG	1 cut(s)	18
BclI	TGATCA	2 cut(s)	691, 837
BcoDI	GTCTC	1 cut(s)	244
BfaI	CTAG	2 cut(s)	569, 594
BfuAI	ACCTGC	2 cut(s)	626, 761
BisI	GCNGC	2 cut(s)	618, 621
BlsI	GCNGC	2 cut(s)	619, 622
Bme1390I	CCNGG	1 cut(s)	18
Bme18I	GGWCC	2 cut(s)	112, 157
BmeT110I	CYCGRG	1 cut(s)	240
BmgT120I	GGNCC	3 cut(s)	112, 157, 746
BmiI	GGNNCC	2 cut(s)	674, 784
BmrFI	CCNGG	1 cut(s)	18
BmrI	ACTGGG	2 cut(s)	282, 300
BmsI	GCATC	1 cut(s)	668
BmuI	ACTGGG	2 cut(s)	282, 300
BplI	GAGNNNNNCTC	2 cut(s)	223, 255
BpuEI	CTTGAG	1 cut(s)	691
BsaBI	GATNNNNATC	1 cut(s)	444
BsaI	GGTCTC	1 cut(s)	244
BsaJI	CCNNGG	4 cut(s)	17, 187, 254, 351
BsaWI	WCCGGW	1 cut(s)	196
BsaXI	ACNNNNNCTCC	2 cut(s)	191, 221
Bsc4I	CCNNNNNNNGG	4 cut(s)	40, 109, 682, 683
Bse1I	ACTGG	4 cut(s)	81, 277, 295, 784
Bse21I	CCTNAGG	2 cut(s)	545, 730
Bse8I	GATNNNNATC	1 cut(s)	444
BseAI	TCCGGA	1 cut(s)	196
BseBI	CCWGG	1 cut(s)	18
BseDI	CCNNGG	4 cut(s)	17, 187, 254, 351
BseGI	GGATG	1 cut(s)	216
BseJI	GATNNNNATC	1 cut(s)	444
BseLI	CCNNNNNNNGG	4 cut(s)	40, 109, 682, 683
BseMII	CTCAG	2 cut(s)	536, 744
BseNI	ACTGG	4 cut(s)	81, 277, 295, 784
BseRI	GAGGAG	5 cut(s)	56, 59, 100, 258, 366
BseXI	GCAGC	2 cut(s)	604, 607
BsgI	GTGCAG	1 cut(s)	654
BshFI	GGCC	3 cut(s)	182, 339, 747
BsiHKAI	GWGCWC	1 cut(s)	376
BsiHKCI	CYCGRG	1 cut(s)	240
BsiSI	CCGG	1 cut(s)	197
BslI	CCNNNNNNNGG	4 cut(s)	40, 109, 682, 683
BsmAI	GTCTC	1 cut(s)	244
BsmI	GAATGC	1 cut(s)	551
BsnI	GGCC	3 cut(s)	182, 339, 747
Bso31I	GGTCTC	1 cut(s)	244
BsoBI	CYCGRG	1 cut(s)	240
Bsp1286I	GDGCHC	1 cut(s)	376
Bsp13I	TCCGGA	1 cut(s)	196
Bsp1407I	TGTACA	1 cut(s)	525
Bsp143I	GATC	6 cut(s)	193, 439, 579, 691, 736, 837
Bsp19I	CCATGG	2 cut(s)	187, 351
BspACI	CCGC	2 cut(s)	575, 768
BspANI	GGCC	3 cut(s)	182, 339, 747
BspCNI	CTCAG	2 cut(s)	537, 743
BspEI	TCCGGA	1 cut(s)	196
BspHI	TCATGA	2 cut(s)	582, 625
BspLI	GGNNCC	2 cut(s)	674, 784
BspMI	ACCTGC	2 cut(s)	626, 761
BspPI	GGATC	1 cut(s)	188
BspTNI	GGTCTC	1 cut(s)	244
BsrGI	TGTACA	1 cut(s)	525
BsrI	ACTGG	4 cut(s)	81, 277, 295, 784
BssECI	CCNNGG	4 cut(s)	17, 187, 254, 351
BssMI	GATC	6 cut(s)	193, 439, 579, 691, 736, 837
BssT1I	CCWWGG	2 cut(s)	187, 351
Bst2UI	CCWGG	1 cut(s)	18
Bst4CI	ACNGT	1 cut(s)	168
Bst6I	CTCTTC	2 cut(s)	319, 469
BstAUI	TGTACA	1 cut(s)	525
BstC8I	GCNNGC	1 cut(s)	184
BstDEI	CTNAG	2 cut(s)	545, 730
BstDSI	CCRYGG	2 cut(s)	187, 351
BstEII	GGTNACC	1 cut(s)	294
BstF5I	GGATG	1 cut(s)	216
BstKTI	GATC	6 cut(s)	196, 442, 582, 694, 739, 840
BstMAI	GTCTC	1 cut(s)	244
BstMBI	GATC	6 cut(s)	193, 439, 579, 691, 736, 837
BstMWI	GCNNNNNNNGC	2 cut(s)	425, 434
BstNI	CCWGG	1 cut(s)	18
BstPI	GGTNACC	1 cut(s)	294
BstSCI	CCNGG	1 cut(s)	16
BstV1I	GCAGC	2 cut(s)	604, 607
BstX2I	RGATCY	1 cut(s)	193
BstYI	RGATCY	1 cut(s)	193
Bsu36I	CCTNAGG	2 cut(s)	545, 730
BsuRI	GGCC	3 cut(s)	182, 339, 747
BtgI	CCRYGG	2 cut(s)	187, 351
BtsCI	GGATG	1 cut(s)	216
BtsI	GCAGTG	1 cut(s)	209
BtsIMutI	CAGTG	1 cut(s)	209
BveI	ACCTGC	2 cut(s)	626, 761
Cac8I	GCNNGC	1 cut(s)	184
CciI	TCATGA	2 cut(s)	582, 625
Cfr13I	GGNCC	3 cut(s)	112, 157, 746
Csp6I	GTAC	1 cut(s)	526
CviAII	CATG	9 cut(s)	109, 188, 352, 380, 434, 583, 626, 682, 743
CviQI	GTAC	1 cut(s)	526
DdeI	CTNAG	2 cut(s)	545, 730
DpnI	GATC	6 cut(s)	195, 441, 581, 693, 738, 839
DpnII	GATC	6 cut(s)	193, 439, 579, 691, 736, 837
Eam1104I	CTCTTC	2 cut(s)	319, 469
EarI	CTCTTC	2 cut(s)	319, 469
EciI	GGCGGA	1 cut(s)	590
Ecl136II	GAGCTC	1 cut(s)	374
Eco130I	CCWWGG	2 cut(s)	187, 351
Eco147I	AGGCCT	1 cut(s)	182
Eco24I	GRGCYC	1 cut(s)	376
Eco31I	GGTCTC	1 cut(s)	244
Eco47I	GGWCC	2 cut(s)	112, 157
Eco53kI	GAGCTC	1 cut(s)	374
Eco81I	CCTNAGG	2 cut(s)	545, 730
Eco88I	CYCGRG	1 cut(s)	240
Eco91I	GGTNACC	1 cut(s)	294
EcoICRI	GAGCTC	1 cut(s)	374
EcoO65I	GGTNACC	1 cut(s)	294
EcoRI	GAATTC	1 cut(s)	506
EcoRII	CCWGG	1 cut(s)	16
EcoT14I	CCWWGG	2 cut(s)	187, 351
EcoT38I	GRGCYC	1 cut(s)	376
ErhI	CCWWGG	2 cut(s)	187, 351
FaeI	CATG	9 cut(s)	112, 191, 355, 383, 437, 586, 629, 685, 746
FatI	CATG	9 cut(s)	108, 187, 351, 379, 433, 582, 625, 681, 742
FauI	CCCGC	1 cut(s)	775
FbaI	TGATCA	2 cut(s)	691, 837
Fnu4HI	GCNGC	2 cut(s)	618, 621
FokI	GGATG	1 cut(s)	203
FriOI	GRGCYC	1 cut(s)	376
Fsp4HI	GCNGC	2 cut(s)	618, 621
FspBI	CTAG	2 cut(s)	569, 594
GluI	GCNGC	2 cut(s)	618, 621
HaeIII	GGCC	3 cut(s)	182, 339, 747
HapII	CCGG	1 cut(s)	197
Hin1II	CATG	9 cut(s)	112, 191, 355, 383, 437, 586, 629, 685, 746
HinfI	GANTC	5 cut(s)	27, 105, 117, 261, 607
HpaII	CCGG	1 cut(s)	197
HphI	GGTGA	3 cut(s)	288, 705, 785
Hpy166II	GTNNAC	2 cut(s)	310, 526
Hpy188I	TCNGA	2 cut(s)	157, 696
Hpy188III	TCNNGA	5 cut(s)	174, 197, 583, 626, 732
Hpy8I	GTNNAC	2 cut(s)	310, 526
HpyAV	CCTTC	4 cut(s)	74, 378, 492, 623
HpyCH4III	ACNGT	1 cut(s)	168
HpyCH4IV	ACGT	1 cut(s)	494
HpyCH4V	TGCA	3 cut(s)	67, 437, 635
HpyF10VI	GCNNNNNNNGC	2 cut(s)	425, 434
HpyF3I	CTNAG	2 cut(s)	545, 730
HpySE526I	ACGT	1 cut(s)	494
Hsp92II	CATG	9 cut(s)	112, 191, 355, 383, 437, 586, 629, 685, 746
Kpn2I	TCCGGA	1 cut(s)	196
Ksp22I	TGATCA	2 cut(s)	691, 837
Kzo9I	GATC	6 cut(s)	193, 439, 579, 691, 736, 837
LmnI	GCTCC	4 cut(s)	46, 199, 379, 493
Lsp1109I	GCAGC	2 cut(s)	604, 607
LweI	GCATC	1 cut(s)	668
MaeI	CTAG	2 cut(s)	569, 594
MaeII	ACGT	1 cut(s)	494
MaeIII	GTNAC	1 cut(s)	294
MalI	GATC	6 cut(s)	195, 441, 581, 693, 738, 839
MboI	GATC	6 cut(s)	193, 439, 579, 691, 736, 837
MboII	GAAGA	7 cut(s)	82, 202, 205, 306, 412, 456, 717
MfeI	CAATTG	1 cut(s)	830
MflI	RGATCY	1 cut(s)	193
MhlI	GDGCHC	1 cut(s)	376
MluCI	AATT	5 cut(s)	319, 506, 601, 830, 847
MlyI	GAGTC	3 cut(s)	114, 126, 255
MroI	TCCGGA	1 cut(s)	196
MseI	TTAA	1 cut(s)	856
MslI	CAYNNNNRTG	1 cut(s)	630
MspI	CCGG	1 cut(s)	197
MspR9I	CCNGG	1 cut(s)	18
MunI	CAATTG	1 cut(s)	830
Mva1269I	GAATGC	1 cut(s)	551
MvaI	CCWGG	1 cut(s)	18
MwoI	GCNNNNNNNGC	2 cut(s)	425, 434
NcoI	CCATGG	2 cut(s)	187, 351
NdeII	GATC	6 cut(s)	193, 439, 579, 691, 736, 837
NlaIII	CATG	9 cut(s)	112, 191, 355, 383, 437, 586, 629, 685, 746
NlaIV	GGNNCC	2 cut(s)	674, 784
NmeAIII	GCCGAG	1 cut(s)	545
NmuCI	GTSAC	1 cut(s)	294
PaeR7I	CTCGAG	1 cut(s)	240
PagI	TCATGA	2 cut(s)	582, 625
PaqCI	CACCTGC	1 cut(s)	761
PceI	AGGCCT	1 cut(s)	182
PctI	GAATGC	1 cut(s)	551
PfeI	GAWTC	2 cut(s)	27, 607
PflFI	GACNNNGTC	1 cut(s)	116
PkrI	GCNGC	2 cut(s)	619, 622
PleI	GAGTC	3 cut(s)	113, 125, 255
PpsI	GAGTC	3 cut(s)	113, 125, 255
Psp124BI	GAGCTC	1 cut(s)	376
Psp6I	CCWGG	1 cut(s)	16
PspEI	GGTNACC	1 cut(s)	294
PspGI	CCWGG	1 cut(s)	16
PspN4I	GGNNCC	2 cut(s)	674, 784
PspPI	GGNCC	3 cut(s)	112, 157, 746
PspXI	VCTCGAGB	1 cut(s)	240
PsuI	RGATCY	1 cut(s)	193
PsyI	GACNNNGTC	1 cut(s)	116
RsaI	GTAC	1 cut(s)	527
RsaNI	GTAC	1 cut(s)	526
RseI	CAYNNNNRTG	1 cut(s)	630
SacI	GAGCTC	1 cut(s)	376
SaqAI	TTAA	1 cut(s)	856
SatI	GCNGC	2 cut(s)	618, 621
Sau3AI	GATC	6 cut(s)	193, 439, 579, 691, 736, 837
Sau96I	GGNCC	3 cut(s)	112, 157, 746
SchI	GAGTC	3 cut(s)	114, 126, 255
ScrFI	CCNGG	1 cut(s)	18
SduI	GDGCHC	1 cut(s)	376
SfaNI	GCATC	1 cut(s)	668
Sfr274I	CTCGAG	1 cut(s)	240
SinI	GGWCC	2 cut(s)	112, 157
SlaI	CTCGAG	1 cut(s)	240
SmiMI	CAYNNNNRTG	1 cut(s)	630
SmlI	CTYRAG	2 cut(s)	240, 706
SmoI	CTYRAG	2 cut(s)	240, 706
Sse9I	AATT	5 cut(s)	319, 506, 601, 830, 847
SseBI	AGGCCT	1 cut(s)	182
SsiI	CCGC	2 cut(s)	575, 768
SspMI	CTAG	2 cut(s)	569, 594
SstI	GAGCTC	1 cut(s)	376
StuI	AGGCCT	1 cut(s)	182
StyD4I	CCNGG	1 cut(s)	16
StyI	CCWWGG	2 cut(s)	187, 351
TaaI	ACNGT	1 cut(s)	168
TaiI	ACGT	1 cut(s)	497
TaqI	TCGA	3 cut(s)	241, 328, 555
TaqII	GACCGA	2 cut(s)	129, 268
TasI	AATT	5 cut(s)	319, 506, 601, 830, 847
TatI	WGTACW	1 cut(s)	525
TfiI	GAWTC	2 cut(s)	27, 607
Tru1I	TTAA	1 cut(s)	856
Tru9I	TTAA	1 cut(s)	856
TscAI	CASTG	1 cut(s)	209
TseFI	GTSAC	1 cut(s)	294
TseI	GCWGC	2 cut(s)	617, 620
Tsp45I	GTSAC	1 cut(s)	294
TspDTI	ATGAA	7 cut(s)	205, 419, 423, 456, 642, 787, 822
TspRI	CASTG	1 cut(s)	209
Tth111I	GACNNNGTC	1 cut(s)	116
VpaK11BI	GGWCC	2 cut(s)	112, 157
XapI	RAATTY	2 cut(s)	506, 601
XhoI	CTCGAG	1 cut(s)	240
XspI	CTAG	2 cut(s)	569, 594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.