Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007468

Physical Location & Seq

Genomic Coordinates Forward (+)

13202284 .. 13207477

Gene Structure 5194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G102200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGCTGACCACGCAGAGAAGTGTATCGGGGTCGTCGCAGAGCCCTAGATCTCCATCCTCGCAGCCGTACCTGTCAGTCTCAGTGACTGATCCTGTGAAATTGGGCAATGGCGTCCAGGCCTATATCTCCTATCGTGTAATCACCAAGACAAATTTTCCCGAGTACCAAGGGCCGGAGAAGATTGTTATTAGACGGTACAGTGATTTTGTTTGGCTACGTGACCGTCTTTTTGAAAAATACAAAGGAGTTTTTATTCCTCCTCTCCCCGAAAAGAGTGCTGTAGAAAAGTTCCGTTTCAGTGCTGAATTCATTGAGATGAGGCGTCAAGCATTGGATGTATTTGTTAATCGAATAGCTTCACATCATGAGCTTCAGCAAAGTGAGGATCTGAGAACATTCTTGCAGGCAGATGAAGAGACAATGGAGAGATTAAGGTTTCATGAGACTGGTATCTTTAAGAAGAAGCCAGCAGATTTGATGCAAATCTTCAAGGATGTACAATCTAAAGTGAGCGATGTTGTTCTTGGAAAGGAAAAGCCAGTGGAAGAGTCAAATCCAGAATATGAGAAGTTGAAACACTACATCTTTGAGCTTGAAAACCACTTGGCTGAAGCCCAGAAGCATGCATACCGTCTTGTAAAGAGGCACAGAGAGCTTGGACAGTCTCTCTCAGATTTCGGGAAAGCAGCCAAGCTCCTTGGAGCTTGTGAAGGTGATGCTCTTGGAAAGGCTTTCACCGAGCTTGGGGCAAAGTCAGAGGCATTATCAATCAGACTGCAAAAGGAGGCTCACCAACTCTTAATGAATTTTGAAGAACCCTTGAAAGATTATGTTCGCGCTGTGCAATCTATTAAGGCCACGATAGCTGAGAGAGCAAATGCCTTCAGACAACAGTGTGAACTTGCTGAAACAATTAAGTTGAAGGAGATAAATCTTGAAAAACTCATGCTAACGCGATCAGACAGGGTTGGAGAAGCTGAGCACGAGTACAAAGGGTTGAAGGCTGAGGGTGAGGAAGCGAGTAGAAGATTTGAAACAATGGTGCGTCTGATGAACGAAGAGATTGTCCGTTTTCAGGAACAAAAAACAACAGACATGGGGATCGCTTTCCACGAATTTGCCAAAGGACAGGCACGCCTGGCAAATAGTATTGCAGATGCTTGGCGAAGTCTCCTCCCCAAGCTCGAAACTTGTTCCTCTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005794 GO:0005802 GO:0005829 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006892 GO:0006896 GO:0006897 GO:0006996 GO:0007034 GO:0007041 GO:0007275 GO:0008104 GO:0008150 GO:0008289 GO:0008333 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009958 GO:0009987 GO:0010008 GO:0010252 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019898 GO:0022622 GO:0030904 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032588 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0035091 GO:0042592 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098657 GO:0098791 GO:0098796 GO:0098805 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

PX Vps5

Protein Analysis

402

Amino Acids

46.03

Weight (kDa)

8.21

Isoelectric Point (pI)

41.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007468)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06140
fragaria_vesca	FvH4_6g19390 FvH4_6g19390 FvH4_6g19390
malus_domestica	MD12G1029600.v1.1 MD14G1029900.v1.1
prunus_persica	Prupe.7G102200_v2.0.a1 Prupe.7G102200_v2.0.a1 Prupe.7G102200_v2.0.a1
pyrus_communis	pycom12g02800 pycom14g02770
rosa_chinensis	RchiOBHm_Chr3g0474681
rosa_laevigata	RLG00000023902
rosa_multiflora	Rmu_sc0001126.1_g000005
rosa_roxburghii	Rroxscaffold_6G00406980
rosa_rugosa	Rorug03G0142300.1 Rorug03G0142400 Rorug03G0142500.1 Rorug03G0142600 Rorug03G0142700
rosa_samantha	Rh3AG192900 Rh3BG222800 Rh3CG217600 Rh3DG218700
rosa_wichuraiana	Rw3G017590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	837, 955
AclWI	GGATC	3 cut(s)	83, 393, 1109
AcsI	RAATTY	4 cut(s)	151, 305, 805, 1115
AcuI	CTGAAG	3 cut(s)	356, 630, 868
AcyI	GRCGYC	2 cut(s)	111, 322
AfaI	GTAC	5 cut(s)	68, 164, 197, 498, 989
AfiI	CCNNNNNNNGG	3 cut(s)	172, 744, 1075
AjnI	CCWGG	2 cut(s)	114, 1137
Alw21I	GWGCWC	1 cut(s)	984
Alw26I	GTCTC	5 cut(s)	82, 410, 437, 669, 1175
AlwI	GGATC	3 cut(s)	83, 393, 1109
AlwNI	CAGNNNCTG	1 cut(s)	86
Ama87I	CYCGRG	1 cut(s)	158
AoxI	GGCC	3 cut(s)	117, 170, 855
ApeKI	GCWGC	2 cut(s)	61, 686
ApoI	RAATTY	4 cut(s)	151, 305, 805, 1115
ArsI	GACNNNNNNTTYG	4 cut(s)	212, 244, 1050, 1082
Asp700I	GAANNNNTTC	1 cut(s)	355
AspLEI	GCGC	1 cut(s)	839
AspS9I	GGNCC	1 cut(s)	170
AsuHPI	GGTGA	5 cut(s)	133, 725, 727, 782, 1022
AvaI	CYCGRG	1 cut(s)	158
BanII	GRGCYC	1 cut(s)	44
BarI	GAAGNNNNNNTAC	2 cut(s)	611, 643
BauI	CACGAG	1 cut(s)	983
Bbv12I	GWGCWC	1 cut(s)	984
BbvCI	CCTCAGC	1 cut(s)	1005
BbvI	GCAGC	2 cut(s)	73, 698
BccI	CCATC	1 cut(s)	61
BceAI	ACGGC	1 cut(s)	49
BcgI	CGANNNNNNTGC	2 cut(s)	257, 291
BciT130I	CCWGG	2 cut(s)	116, 1139
BcoDI	GTCTC	5 cut(s)	82, 410, 437, 669, 1175
BfaI	CTAG	1 cut(s)	45
BfmI	CTRYAG	1 cut(s)	279
BglII	AGATCT	1 cut(s)	47
BisI	GCNGC	2 cut(s)	62, 687
BlpI	GCTNAGC	1 cut(s)	978
BlsI	GCNGC	2 cut(s)	63, 688
Bme1390I	CCNGG	2 cut(s)	116, 1139
BmeT110I	CYCGRG	1 cut(s)	158
BmgT120I	GGNCC	1 cut(s)	170
BmrFI	CCNGG	2 cut(s)	116, 1139
BmsI	GCATC	3 cut(s)	468, 706, 1147
Bpu10I	CCTNAGC	1 cut(s)	1005
Bpu1102I	GCTNAGC	1 cut(s)	978
BsaAI	YACGTR	1 cut(s)	218
BsaBI	GATNNNNATC	2 cut(s)	52, 482
BsaHI	GRCGYC	2 cut(s)	111, 322
BsaJI	CCNNGG	2 cut(s)	166, 697
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 744, 1075
Bse1I	ACTGG	2 cut(s)	451, 539
Bse3DI	GCAATG	1 cut(s)	112
Bse8I	GATNNNNATC	2 cut(s)	52, 482
BseBI	CCWGG	2 cut(s)	116, 1139
BseDI	CCNNGG	2 cut(s)	166, 697
BseGI	GGATG	3 cut(s)	53, 340, 499
BseJI	GATNNNNATC	2 cut(s)	52, 482
BseLI	CCNNNNNNNGG	3 cut(s)	172, 744, 1075
BseMI	GCAATG	1 cut(s)	112
BseMII	CTCAG	6 cut(s)	93, 380, 684, 858, 969, 996
BseNI	ACTGG	2 cut(s)	451, 539
BseRI	GAGGAG	2 cut(s)	249, 1163
BseXI	GCAGC	2 cut(s)	73, 698
Bsh1236I	CGCG	2 cut(s)	837, 955
BshFI	GGCC	3 cut(s)	119, 172, 857
BsiHKAI	GWGCWC	1 cut(s)	984
BsiHKCI	CYCGRG	1 cut(s)	158
BsiSI	CCGG	1 cut(s)	173
BslI	CCNNNNNNNGG	3 cut(s)	172, 744, 1075
BsmAI	GTCTC	5 cut(s)	82, 410, 437, 669, 1175
BsnI	GGCC	3 cut(s)	119, 172, 857
BsoBI	CYCGRG	1 cut(s)	158
Bsp1286I	GDGCHC	2 cut(s)	44, 984
Bsp1407I	TGTACA	1 cut(s)	496
Bsp143I	GATC	5 cut(s)	47, 88, 385, 956, 1101
Bsp1720I	GCTNAGC	1 cut(s)	978
BspANI	GGCC	3 cut(s)	119, 172, 857
BspCNI	CTCAG	6 cut(s)	92, 381, 683, 859, 970, 997
BspFNI	CGCG	2 cut(s)	837, 955
BspHI	TCATGA	2 cut(s)	364, 439
BspPI	GGATC	3 cut(s)	83, 393, 1109
BsrDI	GCAATG	1 cut(s)	112
BsrGI	TGTACA	1 cut(s)	496
BsrI	ACTGG	2 cut(s)	451, 539
BssECI	CCNNGG	2 cut(s)	166, 697
BssMI	GATC	5 cut(s)	47, 88, 385, 956, 1101
BssNI	GRCGYC	2 cut(s)	111, 322
BssSI	CACGAG	1 cut(s)	983
BssT1I	CCWWGG	2 cut(s)	166, 697
Bst2BI	CACGAG	1 cut(s)	983
Bst2UI	CCWGG	2 cut(s)	116, 1139
Bst4CI	ACNGT	6 cut(s)	195, 200, 224, 632, 663, 894
Bst6I	CTCTTC	3 cut(s)	408, 540, 1053
BstACI	GRCGYC	2 cut(s)	111, 322
BstAUI	TGTACA	1 cut(s)	496
BstBAI	YACGTR	1 cut(s)	218
BstC8I	GCNNGC	4 cut(s)	405, 468, 624, 1135
BstDEI	CTNAG	6 cut(s)	79, 389, 670, 867, 978, 1005
BstF5I	GGATG	3 cut(s)	53, 340, 499
BstFNI	CGCG	2 cut(s)	837, 955
BstHHI	GCGC	1 cut(s)	839
BstKTI	GATC	5 cut(s)	50, 91, 388, 959, 1104
BstMAI	GTCTC	5 cut(s)	82, 410, 437, 669, 1175
BstMBI	GATC	5 cut(s)	47, 88, 385, 956, 1101
BstMWI	GCNNNNNNNGC	5 cut(s)	10, 652, 863, 872, 1139
BstNI	CCWGG	2 cut(s)	116, 1139
BstNSI	RCATGY	1 cut(s)	626
BstSCI	CCNGG	2 cut(s)	114, 1137
BstSFI	CTRYAG	1 cut(s)	279
BstUI	CGCG	2 cut(s)	837, 955
BstV1I	GCAGC	2 cut(s)	73, 698
BstX2I	RGATCY	2 cut(s)	47, 385
BstYI	RGATCY	2 cut(s)	47, 385
BsuRI	GGCC	3 cut(s)	119, 172, 857
BtgZI	GCGATG	1 cut(s)	528
BtsCI	GGATG	3 cut(s)	53, 340, 499
BtsIMutI	CAGTG	5 cut(s)	87, 205, 304, 546, 899
Cac8I	GCNNGC	4 cut(s)	405, 468, 624, 1135
CaiI	CAGNNNCTG	1 cut(s)	86
CciI	TCATGA	2 cut(s)	364, 439
CfoI	GCGC	1 cut(s)	839
Cfr13I	GGNCC	1 cut(s)	170
CseI	GACGC	3 cut(s)	100, 311, 1034
Csp6I	GTAC	5 cut(s)	67, 163, 196, 497, 988
CviAII	CATG	5 cut(s)	365, 440, 623, 946, 1096
CviQI	GTAC	5 cut(s)	67, 163, 196, 497, 988
DdeI	CTNAG	6 cut(s)	79, 389, 670, 867, 978, 1005
DpnI	GATC	5 cut(s)	49, 90, 387, 958, 1103
DpnII	GATC	5 cut(s)	47, 88, 385, 956, 1101
Eam1104I	CTCTTC	3 cut(s)	408, 540, 1053
EarI	CTCTTC	3 cut(s)	408, 540, 1053
Eco130I	CCWWGG	2 cut(s)	166, 697
Eco147I	AGGCCT	1 cut(s)	119
Eco24I	GRGCYC	1 cut(s)	44
Eco57I	CTGAAG	3 cut(s)	356, 630, 868
Eco88I	CYCGRG	1 cut(s)	158
EcoRI	GAATTC	1 cut(s)	305
EcoRII	CCWGG	2 cut(s)	114, 1137
EcoT14I	CCWWGG	2 cut(s)	166, 697
EcoT22I	ATGCAT	1 cut(s)	628
EcoT38I	GRGCYC	1 cut(s)	44
ErhI	CCWWGG	2 cut(s)	166, 697
FaeI	CATG	5 cut(s)	368, 443, 626, 949, 1099
FatI	CATG	5 cut(s)	364, 439, 622, 945, 1095
Fnu4HI	GCNGC	2 cut(s)	62, 687
FokI	GGATG	3 cut(s)	40, 347, 506
FriOI	GRGCYC	1 cut(s)	44
Fsp4HI	GCNGC	2 cut(s)	62, 687
FspBI	CTAG	1 cut(s)	45
GlaI	GCGC	1 cut(s)	838
GluI	GCNGC	2 cut(s)	62, 687
HaeIII	GGCC	3 cut(s)	119, 172, 857
HapII	CCGG	1 cut(s)	173
HgaI	GACGC	3 cut(s)	100, 311, 1034
HhaI	GCGC	1 cut(s)	839
Hin1I	GRCGYC	2 cut(s)	111, 322
Hin1II	CATG	5 cut(s)	368, 443, 626, 949, 1099
Hin6I	GCGC	1 cut(s)	837
HinP1I	GCGC	1 cut(s)	837
HinfI	GANTC	1 cut(s)	548
HpaII	CCGG	1 cut(s)	173
HphI	GGTGA	5 cut(s)	133, 725, 727, 782, 1022
Hpy166II	GTNNAC	1 cut(s)	899
Hpy188I	TCNGA	7 cut(s)	390, 673, 757, 773, 887, 961, 1050
Hpy188III	TCNNGA	7 cut(s)	158, 365, 440, 557, 679, 935, 1076
Hpy8I	GTNNAC	1 cut(s)	899
Hpy99I	CGWCG	1 cut(s)	37
HpyAV	CCTTC	4 cut(s)	704, 892, 916, 994
HpyCH4III	ACNGT	6 cut(s)	195, 200, 224, 632, 663, 894
HpyCH4IV	ACGT	1 cut(s)	217
HpyCH4V	TGCA	7 cut(s)	403, 481, 626, 778, 844, 1154, 1202
HpyF10VI	GCNNNNNNNGC	5 cut(s)	10, 652, 863, 872, 1139
HpyF3I	CTNAG	6 cut(s)	79, 389, 670, 867, 978, 1005
HpySE526I	ACGT	1 cut(s)	217
Hsp92I	GRCGYC	2 cut(s)	111, 322
Hsp92II	CATG	5 cut(s)	368, 443, 626, 949, 1099
HspAI	GCGC	1 cut(s)	837
Kzo9I	GATC	5 cut(s)	47, 88, 385, 956, 1101
LmnI	GCTCC	2 cut(s)	699, 701
Lsp1109I	GCAGC	2 cut(s)	73, 698
LweI	GCATC	3 cut(s)	468, 706, 1147
MaeI	CTAG	1 cut(s)	45
MaeII	ACGT	1 cut(s)	217
MaeIII	GTNAC	2 cut(s)	82, 218
MalI	GATC	5 cut(s)	49, 90, 387, 958, 1103
MboI	GATC	5 cut(s)	47, 88, 385, 956, 1101
MboII	GAAGA	8 cut(s)	190, 425, 472, 478, 557, 824, 1038, 1070
MflI	RGATCY	2 cut(s)	47, 385
MhlI	GDGCHC	2 cut(s)	44, 984
MluCI	AATT	6 cut(s)	98, 151, 305, 805, 912, 1115
MlyI	GAGTC	1 cut(s)	557
MmeI	TCCRAC	1 cut(s)	949
Mph1103I	ATGCAT	1 cut(s)	628
MroXI	GAANNNNTTC	1 cut(s)	355
MseI	TTAA	6 cut(s)	345, 431, 456, 800, 852, 915
MslI	CAYNNNNRTG	1 cut(s)	314
MspI	CCGG	1 cut(s)	173
MspR9I	CCNGG	2 cut(s)	116, 1139
MvaI	CCWGG	2 cut(s)	116, 1139
MvnI	CGCG	2 cut(s)	837, 955
MwoI	GCNNNNNNNGC	5 cut(s)	10, 652, 863, 872, 1139
NdeII	GATC	5 cut(s)	47, 88, 385, 956, 1101
NlaIII	CATG	5 cut(s)	368, 443, 626, 949, 1099
NmuCI	GTSAC	2 cut(s)	82, 218
NsiI	ATGCAT	1 cut(s)	628
NspI	RCATGY	1 cut(s)	626
PaeI	GCATGC	1 cut(s)	626
PagI	TCATGA	2 cut(s)	364, 439
PceI	AGGCCT	1 cut(s)	119
PcsI	WCGNNNNNNNCGW	1 cut(s)	1110
PdmI	GAANNNNTTC	1 cut(s)	355
PkrI	GCNGC	2 cut(s)	63, 688
PleI	GAGTC	1 cut(s)	556
PpsI	GAGTC	1 cut(s)	556
Ppu21I	YACGTR	1 cut(s)	218
Psp6I	CCWGG	2 cut(s)	114, 1137
PspGI	CCWGG	2 cut(s)	114, 1137
PspPI	GGNCC	1 cut(s)	170
PstNI	CAGNNNCTG	1 cut(s)	86
PsuI	RGATCY	2 cut(s)	47, 385
RsaI	GTAC	5 cut(s)	68, 164, 197, 498, 989
RsaNI	GTAC	5 cut(s)	67, 163, 196, 497, 988
RseI	CAYNNNNRTG	1 cut(s)	314
SaqAI	TTAA	6 cut(s)	345, 431, 456, 800, 852, 915
SatI	GCNGC	2 cut(s)	62, 687
Sau3AI	GATC	5 cut(s)	47, 88, 385, 956, 1101
Sau96I	GGNCC	1 cut(s)	170
SchI	GAGTC	1 cut(s)	557
ScrFI	CCNGG	2 cut(s)	116, 1139
SduI	GDGCHC	2 cut(s)	44, 984
SfaNI	GCATC	3 cut(s)	468, 706, 1147
SfcI	CTRYAG	1 cut(s)	279
SmiMI	CAYNNNNRTG	1 cut(s)	314
SphI	GCATGC	1 cut(s)	626
Sse9I	AATT	6 cut(s)	98, 151, 305, 805, 912, 1115
SseBI	AGGCCT	1 cut(s)	119
SspMI	CTAG	1 cut(s)	45
StuI	AGGCCT	1 cut(s)	119
StyD4I	CCNGG	2 cut(s)	114, 1137
StyI	CCWWGG	2 cut(s)	166, 697
TaaI	ACNGT	6 cut(s)	195, 200, 224, 632, 663, 894
TaiI	ACGT	1 cut(s)	220
TaqI	TCGA	2 cut(s)	349, 1185
TasI	AATT	6 cut(s)	98, 151, 305, 805, 912, 1115
TatI	WGTACW	2 cut(s)	496, 987
Tru1I	TTAA	6 cut(s)	345, 431, 456, 800, 852, 915
Tru9I	TTAA	6 cut(s)	345, 431, 456, 800, 852, 915
TscAI	CASTG	5 cut(s)	87, 205, 304, 546, 899
TseFI	GTSAC	2 cut(s)	82, 218
TseI	GCWGC	2 cut(s)	61, 686
Tsp45I	GTSAC	2 cut(s)	82, 218
TspDTI	ATGAA	5 cut(s)	298, 426, 428, 818, 1067
TspGWI	ACGGA	2 cut(s)	281, 1058
TspRI	CASTG	5 cut(s)	87, 205, 304, 546, 899
XapI	RAATTY	4 cut(s)	151, 305, 805, 1115
XceI	RCATGY	1 cut(s)	626
XmnI	GAANNNNTTC	1 cut(s)	355
XspI	CTAG	1 cut(s)	45
Zsp2I	ATGCAT	1 cut(s)	628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.