Small nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23930 AT3G11500 AT3G11500 |
| fragaria_vesca | FvH4_6g19160 |
| malus_domestica | MD12G1027400.v1.1 |
| prunus_persica | Prupe.7G104100_v2.0.a1 |
| pyrus_communis | pycom12g02630 pycom14g02630 |
| rosa_chinensis | RchiOBHm_Chr3g0456431 RchiOBHm_Chr3g0474271 |
| rosa_multiflora | Rmu_sc0000041.1_g000021 Rmu_sc0004507.1_g000019 Rmu_sc0007753.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00407390 |
| rosa_rugosa | Rorug03G0110900 Rorug03G0139900 Rorug03G0343100 Rorug04G0442800 Rorug05G0558300 |
| rosa_samantha | Rh1AG194800 Rh2BG255200 Rh7BG169600 |
| rosa_wichuraiana | Rw3G017380 Rw3G018710 Rw5G014960 Rw7G015750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 22 |
| AclWI | GGATC | 1 cut(s) | 33 |
| AcoI | YGGCCR | 1 cut(s) | 228 |
| AdeI | CACNNNGTG | 1 cut(s) | 98 |
| AfaI | GTAC | 1 cut(s) | 38 |
| AgsI | TTSAA | 1 cut(s) | 56 |
| AluBI | AGCT | 2 cut(s) | 52, 64 |
| AluI | AGCT | 2 cut(s) | 52, 64 |
| AlwI | GGATC | 1 cut(s) | 33 |
| Aor13HI | TCCGGA | 1 cut(s) | 22 |
| AoxI | GGCC | 1 cut(s) | 228 |
| AsuHPI | GGTGA | 1 cut(s) | 193 |
| BalI | TGGCCA | 1 cut(s) | 230 |
| BccI | CCATC | 1 cut(s) | 73 |
| BfaI | CTAG | 1 cut(s) | 122 |
| BpuEI | CTTGAG | 1 cut(s) | 239 |
| BsaWI | WCCGGW | 1 cut(s) | 22 |
| Bse1I | ACTGG | 2 cut(s) | 109, 224 |
| Bse3DI | GCAATG | 1 cut(s) | 160 |
| BseAI | TCCGGA | 1 cut(s) | 22 |
| BseGI | GGATG | 1 cut(s) | 84 |
| BseMI | GCAATG | 1 cut(s) | 160 |
| BseNI | ACTGG | 2 cut(s) | 109, 224 |
| BshFI | GGCC | 1 cut(s) | 230 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BsnI | GGCC | 1 cut(s) | 230 |
| Bsp13I | TCCGGA | 1 cut(s) | 22 |
| Bsp143I | GATC | 1 cut(s) | 25 |
| BspANI | GGCC | 1 cut(s) | 230 |
| BspEI | TCCGGA | 1 cut(s) | 22 |
| BspHI | TCATGA | 1 cut(s) | 114 |
| BspPI | GGATC | 1 cut(s) | 33 |
| BsrDI | GCAATG | 1 cut(s) | 160 |
| BsrI | ACTGG | 2 cut(s) | 109, 224 |
| BssMI | GATC | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 2 cut(s) | 139, 208 |
| BstEII | GGTNACC | 1 cut(s) | 202 |
| BstF5I | GGATG | 1 cut(s) | 84 |
| BstKTI | GATC | 1 cut(s) | 28 |
| BstMBI | GATC | 1 cut(s) | 25 |
| BstPI | GGTNACC | 1 cut(s) | 202 |
| BstX2I | RGATCY | 1 cut(s) | 25 |
| BstYI | RGATCY | 1 cut(s) | 25 |
| BsuRI | GGCC | 1 cut(s) | 230 |
| BtsCI | GGATG | 1 cut(s) | 84 |
| BtsIMutI | CAGTG | 1 cut(s) | 231 |
| CciI | TCATGA | 1 cut(s) | 114 |
| Csp6I | GTAC | 1 cut(s) | 37 |
| CviAII | CATG | 3 cut(s) | 40, 115, 175 |
| CviJI | RGCY | 5 cut(s) | 19, 52, 64, 223, 230 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 52, 64, 223, 230 |
| CviQI | GTAC | 1 cut(s) | 37 |
| DpnI | GATC | 1 cut(s) | 27 |
| DpnII | GATC | 1 cut(s) | 25 |
| DraIII | CACNNNGTG | 1 cut(s) | 98 |
| EaeI | YGGCCR | 1 cut(s) | 228 |
| Eco91I | GGTNACC | 1 cut(s) | 202 |
| EcoO65I | GGTNACC | 1 cut(s) | 202 |
| FaeI | CATG | 3 cut(s) | 43, 118, 178 |
| FaiI | YATR | 5 cut(s) | 41, 116, 170, 176, 239 |
| FatI | CATG | 3 cut(s) | 39, 114, 174 |
| FokI | GGATG | 1 cut(s) | 91 |
| FspBI | CTAG | 1 cut(s) | 122 |
| HaeIII | GGCC | 1 cut(s) | 230 |
| HapII | CCGG | 1 cut(s) | 23 |
| Hin1II | CATG | 3 cut(s) | 43, 118, 178 |
| HincII | GTYRAC | 1 cut(s) | 130 |
| HindII | GTYRAC | 1 cut(s) | 130 |
| HindIII | AAGCTT | 1 cut(s) | 50 |
| HinfI | GANTC | 2 cut(s) | 118, 184 |
| HpaII | CCGG | 1 cut(s) | 23 |
| HphI | GGTGA | 1 cut(s) | 193 |
| Hpy166II | GTNNAC | 1 cut(s) | 130 |
| Hpy188I | TCNGA | 1 cut(s) | 78 |
| Hpy188III | TCNNGA | 2 cut(s) | 23, 115 |
| Hpy8I | GTNNAC | 1 cut(s) | 130 |
| HpyCH4III | ACNGT | 2 cut(s) | 139, 208 |
| HpyCH4V | TGCA | 1 cut(s) | 241 |
| Hsp92II | CATG | 3 cut(s) | 43, 118, 178 |
| Kpn2I | TCCGGA | 1 cut(s) | 22 |
| Kzo9I | GATC | 1 cut(s) | 25 |
| LpnPI | CCDG | 3 cut(s) | 36, 122, 237 |
| MaeI | CTAG | 1 cut(s) | 122 |
| MaeIII | GTNAC | 1 cut(s) | 202 |
| MalI | GATC | 1 cut(s) | 27 |
| MboI | GATC | 1 cut(s) | 25 |
| MflI | RGATCY | 1 cut(s) | 25 |
| MlsI | TGGCCA | 1 cut(s) | 230 |
| MluNI | TGGCCA | 1 cut(s) | 230 |
| MnlI | CCTC | 2 cut(s) | 30, 205 |
| Mox20I | TGGCCA | 1 cut(s) | 230 |
| MroI | TCCGGA | 1 cut(s) | 22 |
| MscI | TGGCCA | 1 cut(s) | 230 |
| MslI | CAYNNNNRTG | 1 cut(s) | 179 |
| Msp20I | TGGCCA | 1 cut(s) | 230 |
| MspI | CCGG | 1 cut(s) | 23 |
| NdeII | GATC | 1 cut(s) | 25 |
| NlaIII | CATG | 3 cut(s) | 43, 118, 178 |
| PagI | TCATGA | 1 cut(s) | 114 |
| PfeI | GAWTC | 2 cut(s) | 118, 184 |
| PspEI | GGTNACC | 1 cut(s) | 202 |
| PsuI | RGATCY | 1 cut(s) | 25 |
| RsaI | GTAC | 1 cut(s) | 38 |
| RsaNI | GTAC | 1 cut(s) | 37 |
| RseI | CAYNNNNRTG | 1 cut(s) | 179 |
| Sau3AI | GATC | 1 cut(s) | 25 |
| SetI | ASST | 4 cut(s) | 11, 16, 54, 66 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 179 |
| SmlI | CTYRAG | 1 cut(s) | 218 |
| SmoI | CTYRAG | 1 cut(s) | 218 |
| SspMI | CTAG | 1 cut(s) | 122 |
| TaaI | ACNGT | 2 cut(s) | 139, 208 |
| TatI | WGTACW | 1 cut(s) | 36 |
| TfiI | GAWTC | 2 cut(s) | 118, 184 |
| TscAI | CASTG | 1 cut(s) | 231 |
| TspDTI | ATGAA | 3 cut(s) | 103, 131, 171 |
| TspRI | CASTG | 1 cut(s) | 231 |
| XspI | CTAG | 1 cut(s) | 122 |