Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0006705

Physical Location & Seq

Genomic Coordinates Reverse (-)

59900121 .. 59902016

Gene Structure 1896 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0442800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGCCTCCGTCGCTCGCTGCCTTTGTCTTCTTCTTCTCAGTTCTTCGCCTCATTTCCTCAGCCTACTCGCACTTATGCTCACCGCACCATCAATCTCTATGCCCACCCTTTACTTCAAATCCTCCTTTTCCCTTCTCTTTCTCACCTGGCTGTGGCCACCCCTCTTTCCAAATCAAATGCTATGCAAATCACTCCATAATCACCATTAACAACCTCGCTTTCTCCCTCATCCACTACGAGCCCAACTCCACATCTCTCCTTCTCTCCCCCTACATCACCAACTCGACAATTAAAGCTAAATCCCTTAGCACTAGCACTAGCAGCTGCTCATCCCCTCACTTTCTTTCAATCCCCAGCCGCTCCATCAACCTCTCCTCTTCCCCTTTTCGCTTCTCCGACGGTTCCTGTAACCGCCTCTCTGTTCTCAAACCTTGCTCCCCCCCAAATCTTCCTAATTGCAGCCACTGTCCCTGGGAATGCAAGCTCATAAAGAGCCCGGTCAAGCTACTCCATGACTGTGGATCTAGTCGCAGCTCTGTTCCCAACCAGGGCTGCCAGGACGATGTCTTGGGATATCTTGACAACTTCCTCCAACTCGGGATCGAGCTCGAGTGGGACGAAGCTCAAGATTCCTACTTCTCAAGCTGCAGAGATTGCGAAGCCAACAACGGCTTCTGCGGCTTCAATTCCTCCGACCCATCACGGCAATTCCTCTGTCTCCACGCCAAAGCTCAACTCTCACCCCCATGGATTAGCAAGCACAACCCCCATCGCGTCGCCATTTTGTGCTCGGTCTTGGCAGTGACTTGTTTGATGGTCATGGTTTCAATTTCTTTAGCCATAATCAGGTCCAGAAGACTACACTCCGCCGCCACAGAAGAAGACCCGACCACATTGTTCCTCCAGCGCCACCGCTCCGCCAGTCTCCTCCCGCCGGTATTCACCTACGAAGAGCTGGAATCATCCACCAACAAATTCGACACCAGGCGCAAAATCGGCGACGGCGGGTTCGGGTCAGTCTACCTGGGCCAGCTCTACGACAGCCGCGTCGTGGCCGTAAAGTACCTCCACAAGCCCCACCACTCCGGCAAGGCCTTCTGCAACGAAATCCTAATCCTCTCCTCAATTGACCATCCTAACCTCGTCAAGCTCCACGGCTACTGCAGCGATCCCAGAGGCCTTCTGTTGGTCTATGATTACGTCCCCAACGGCACTCTCGCCGACCATCTCCACGGCCCGAAGAGCCTCTACCGGAAAGGGTCGATGACGTGGCAGGTGAGGGTTGATATAGCTTTGCAAACCGCCATGGTTATGGAGTACTTGCATTTCTCGGTGGTGCCTCCGGTGGTTCACAGAGACATAACTTCGTCTAATATTTTCGCGGAAAGAGACATGAGAATCAAAGTCGGGGATTTTGGGCTGTCGAGGCTTTTGGTCTTCCCGGAAACGACGTCGTCGAGTTCGGGGTACGTTTGGACCGGGCCTCAGGGTACCCCGGGTTACTTGGACCCGGATTACCACCGGTCGTTCCGGTTGACGGATAAGAGTGACGTGTACAGCTTCGGGGTGGTGCTGTTGGAGTTGATTTCGGGTCAGAAGGCGGTGGACCAGAGGAGGGACAAGAGGGAGTTGGCTTTGGCGGATATGATGGTGTCCAAGATCCAGATGGGCCTGCTCCATCAGGTAGTCGACCCGGTTCTGATTGTGGATGGGAATGTGACGGATGGTGTTGACGTGGCGGCAGAGCTGGCGTTCAGGTGCGTCGCGGCGGAGAAGGACGACCGTCCAGATGCCAGGGAGGTGGTGCAGGAGCTGAGGCGGATCAGGGGCCGTACACGTGGGATTAGCCGCGCTTCGAGTTCGAATGTGATTGGCGCTGACGTGGCAAAAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005684 GO:0005685 GO:0005686 GO:0005687 GO:0005689 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0030532 GO:0032991 GO:0034641 GO:0034719 GO:0035770 GO:0036464 GO:0043170 GO:0043186 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045495 GO:0046483 GO:0060293 GO:0071004 GO:0071010 GO:0071011 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:0097525 GO:0097526 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

LSM

Protein Analysis

631

Amino Acids

69.85

Weight (kDa)

8.16

Isoelectric Point (pI)

45.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WAK_assoc	PF14380	188 - 241	5.6e-06	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	327 - 603	2.5e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	328 - 541	6.5e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006705)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23930 AT3G11500 AT3G11500
fragaria_vesca	FvH4_6g19160
malus_domestica	MD12G1027400.v1.1
prunus_persica	Prupe.7G104100_v2.0.a1
pyrus_communis	pycom12g02630 pycom14g02630
rosa_chinensis	RchiOBHm_Chr3g0456431 RchiOBHm_Chr3g0474271
rosa_multiflora	Rmu_sc0000041.1_g000021 Rmu_sc0004507.1_g000019 Rmu_sc0007753.1_g000006
rosa_roxburghii	Rroxscaffold_6G00407390
rosa_rugosa	Rorug03G0110900 Rorug03G0139900 Rorug03G0343100 Rorug04G0442800 Rorug05G0558300
rosa_samantha	Rh1AG194800 Rh2BG255200 Rh7BG169600
rosa_wichuraiana	Rw3G017380 Rw3G018710 Rw5G014960 Rw7G015750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1264
AasI	GACNNNNNNGTC	1 cut(s)	1046
AatII	GACGTC	1 cut(s)	1454
Acc36I	ACCTGC	1 cut(s)	1264
Acc65I	GGTACC	1 cut(s)	1490
AccB1I	GGYRCC	2 cut(s)	1336, 1490
AccBSI	CCGCTC	2 cut(s)	360, 915
AccI	GTMKAC	2 cut(s)	1020, 1689
AccII	CGCG	5 cut(s)	774, 1047, 1382, 1766, 1851
AclWI	GGATC	5 cut(s)	529, 608, 1163, 1654, 1829
AcoI	YGGCCR	2 cut(s)	154, 1053
AcsI	RAATTY	1 cut(s)	974
AcvI	CACGTG	1 cut(s)	1838
AcyI	GRCGYC	1 cut(s)	1451
AfaI	GTAC	6 cut(s)	1064, 1319, 1469, 1492, 1556, 1834
AfiI	CCNNNNNNNGG	8 cut(s)	152, 548, 846, 934, 1051, 1186, 1537, 1615
AflIII	ACRYGT	2 cut(s)	1551, 1835
AgeI	ACCGGT	1 cut(s)	1521
AgsI	TTSAA	4 cut(s)	117, 348, 685, 828
AjiI	CACGTC	4 cut(s)	1269, 1552, 1735, 1882
AjnI	CCWGG	7 cut(s)	145, 470, 546, 555, 983, 1023, 1793
AjuI	GAANNNNNNNTTGG	2 cut(s)	656, 688
Alw21I	GWGCWC	2 cut(s)	609, 791
Alw26I	GTCTC	4 cut(s)	722, 929, 1350, 1383
AlwI	GGATC	5 cut(s)	529, 608, 1163, 1654, 1829
AlwNI	CAGNNNCTG	2 cut(s)	465, 1813
Ama87I	CYCGRG	3 cut(s)	596, 608, 1495
AoxI	GGCC	9 cut(s)	154, 1027, 1053, 1092, 1177, 1234, 1481, 1669, 1828
ApeKI	GCWGC	8 cut(s)	17, 321, 324, 459, 531, 552, 645, 1164
ApoI	RAATTY	1 cut(s)	974
ArsI	GACNNNNNNTTYG	2 cut(s)	992, 1024
AsiGI	ACCGGT	1 cut(s)	1521
Asp718I	GGTACC	1 cut(s)	1490
AspLEI	GCGC	4 cut(s)	909, 990, 1853, 1877
AspS9I	GGNCC	9 cut(s)	849, 1027, 1235, 1476, 1481, 1507, 1606, 1669, 1828
AsuC2I	CCSGG	7 cut(s)	497, 1442, 1480, 1496, 1497, 1511, 1694
AsuHPI	GGTGA	7 cut(s)	72, 135, 193, 268, 732, 934, 1288
AsuII	TTCGAA	1 cut(s)	1862
AvaI	CYCGRG	3 cut(s)	596, 608, 1495
AvaII	GGWCC	4 cut(s)	849, 1476, 1507, 1606
AxyI	CCTNAGG	1 cut(s)	1485
BalI	TGGCCA	1 cut(s)	156
BanI	GGYRCC	2 cut(s)	1336, 1490
BanII	GRGCYC	3 cut(s)	243, 497, 609
BarI	GAAGNNNNNNTAC	2 cut(s)	1232, 1264
BbrPI	CACGTG	1 cut(s)	1838
BbsI	GAAGAC	4 cut(s)	19, 862, 888, 1429
Bbv12I	GWGCWC	2 cut(s)	609, 791
BbvCI	CCTCAGC	2 cut(s)	58, 1814
BbvI	GCAGC	8 cut(s)	4, 311, 333, 471, 539, 543, 632, 1176
BceAI	ACGGC	8 cut(s)	685, 719, 1018, 1040, 1171, 1225, 1249, 1815
BciT130I	CCWGG	7 cut(s)	147, 472, 548, 557, 985, 1025, 1795
BcnI	CCSGG	7 cut(s)	497, 1442, 1480, 1496, 1497, 1511, 1694
BcoDI	GTCTC	4 cut(s)	722, 929, 1350, 1383
BfaI	CTAG	3 cut(s)	312, 318, 525
BfmI	CTRYAG	2 cut(s)	646, 1162
BfoI	RGCGCY	2 cut(s)	910, 1878
BfuAI	ACCTGC	1 cut(s)	1264
BmcAI	AGTACT	1 cut(s)	1319
Bme18I	GGWCC	4 cut(s)	849, 1476, 1507, 1606
BmeT110I	CYCGRG	3 cut(s)	596, 608, 1495
BmgBI	CACGTC	4 cut(s)	1269, 1552, 1735, 1882
BmgT120I	GGNCC	9 cut(s)	849, 1027, 1235, 1476, 1481, 1507, 1606, 1669, 1828
BmiI	GGNNCC	5 cut(s)	403, 1338, 1492, 1509, 1829
BmsI	GCATC	1 cut(s)	1780
BoxI	GACNNNNGTC	1 cut(s)	1782
BpiI	GAAGAC	4 cut(s)	19, 862, 888, 1429
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
BpmI	CTGGAG	1 cut(s)	887
Bpu10I	CCTNAGC	3 cut(s)	58, 305, 1814
Bpu14I	TTCGAA	1 cut(s)	1862
BpuEI	CTTGAG	2 cut(s)	609, 625
BpuMI	CCSGG	7 cut(s)	497, 1442, 1480, 1496, 1497, 1511, 1694
BsaAI	YACGTR	1 cut(s)	1838
BsaHI	GRCGYC	1 cut(s)	1451
BsaWI	WCCGGW	4 cut(s)	1251, 1342, 1521, 1530
Bsc4I	CCNNNNNNNGG	8 cut(s)	152, 548, 846, 934, 1051, 1186, 1537, 1615
Bse118I	RCCGGY	2 cut(s)	934, 1521
Bse1I	ACTGG	1 cut(s)	921
Bse21I	CCTNAGG	1 cut(s)	1485
BseBI	CCWGG	7 cut(s)	147, 472, 548, 557, 985, 1025, 1795
BseGI	GGATG	6 cut(s)	228, 329, 962, 1132, 1714, 1729
BseLI	CCNNNNNNNGG	8 cut(s)	152, 548, 846, 934, 1051, 1186, 1537, 1615
BseMII	CTCAG	4 cut(s)	51, 72, 1499, 1805
BseNI	ACTGG	1 cut(s)	921
BseRI	GAGGAG	4 cut(s)	364, 917, 1111, 1627
BseXI	GCAGC	8 cut(s)	4, 311, 333, 471, 539, 543, 632, 1176
BseYI	CCCAGC	1 cut(s)	353
BsgI	GTGCAG	1 cut(s)	1826
Bsh1236I	CGCG	5 cut(s)	774, 1047, 1382, 1766, 1851
Bsh1285I	CGRYCG	2 cut(s)	1526, 1783
BshFI	GGCC	9 cut(s)	156, 1029, 1055, 1094, 1179, 1236, 1483, 1671, 1830
BshNI	GGYRCC	2 cut(s)	1336, 1490
BshTI	ACCGGT	1 cut(s)	1521
BsiEI	CGRYCG	2 cut(s)	1526, 1783
BsiHKAI	GWGCWC	2 cut(s)	609, 791
BsiHKCI	CYCGRG	3 cut(s)	596, 608, 1495
BslFI	GGGAC	4 cut(s)	453, 629, 1187, 1631
BslI	CCNNNNNNNGG	8 cut(s)	152, 548, 846, 934, 1051, 1186, 1537, 1615
BsmAI	GTCTC	4 cut(s)	722, 929, 1350, 1383
BsmFI	GGGAC	4 cut(s)	453, 629, 1187, 1631
BsmI	GAATGC	1 cut(s)	482
BsnI	GGCC	9 cut(s)	156, 1029, 1055, 1094, 1179, 1236, 1483, 1671, 1830
BsoBI	CYCGRG	3 cut(s)	596, 608, 1495
Bsp119I	TTCGAA	1 cut(s)	1862
Bsp1286I	GDGCHC	4 cut(s)	243, 497, 609, 791
Bsp1407I	TGTACA	1 cut(s)	1554
Bsp143I	GATC	5 cut(s)	521, 600, 1168, 1659, 1821
Bsp19I	CCATGG	2 cut(s)	746, 1305
BspANI	GGCC	9 cut(s)	156, 1029, 1055, 1094, 1179, 1236, 1483, 1671, 1830
BspCNI	CTCAG	4 cut(s)	50, 71, 1498, 1806
BspFNI	CGCG	5 cut(s)	774, 1047, 1382, 1766, 1851
BspLI	GGNNCC	5 cut(s)	403, 1338, 1492, 1509, 1829
BspMAI	CTGCAG	2 cut(s)	650, 1166
BspMI	ACCTGC	1 cut(s)	1264
BspPI	GGATC	5 cut(s)	529, 608, 1163, 1654, 1829
BspQI	GCTCTTC	2 cut(s)	945, 1235
BspT104I	TTCGAA	1 cut(s)	1862
BspT107I	GGYRCC	2 cut(s)	1336, 1490
BsrBI	CCGCTC	2 cut(s)	360, 915
BsrFI	RCCGGY	2 cut(s)	934, 1521
BsrGI	TGTACA	1 cut(s)	1554
BsrI	ACTGG	1 cut(s)	921
BssAI	RCCGGY	2 cut(s)	934, 1521
BssMI	GATC	5 cut(s)	521, 600, 1168, 1659, 1821
BssNI	GRCGYC	1 cut(s)	1451
BssT1I	CCWWGG	2 cut(s)	746, 1305
Bst2UI	CCWGG	7 cut(s)	147, 472, 548, 557, 985, 1025, 1795
Bst4CI	ACNGT	4 cut(s)	401, 467, 518, 1784
Bst6I	CTCTTC	3 cut(s)	382, 945, 1235
BstACI	GRCGYC	1 cut(s)	1451
BstAPI	GCANNNNNTGC	1 cut(s)	654
BstAUI	TGTACA	1 cut(s)	1554
BstBAI	YACGTR	1 cut(s)	1838
BstBI	TTCGAA	1 cut(s)	1862
BstC8I	GCNNGC	6 cut(s)	15, 482, 758, 1031, 1673, 1749
BstDEI	CTNAG	5 cut(s)	37, 58, 305, 1485, 1814
BstDSI	CCRYGG	4 cut(s)	746, 1153, 1231, 1305
BstF5I	GGATG	6 cut(s)	228, 329, 962, 1132, 1714, 1729
BstFNI	CGCG	5 cut(s)	774, 1047, 1382, 1766, 1851
BstH2I	RGCGCY	2 cut(s)	910, 1878
BstHHI	GCGC	4 cut(s)	909, 990, 1853, 1877
BstKTI	GATC	5 cut(s)	524, 603, 1171, 1662, 1824
BstMAI	GTCTC	4 cut(s)	722, 929, 1350, 1383
BstMBI	GATC	5 cut(s)	521, 600, 1168, 1659, 1821
BstMCI	CGRYCG	2 cut(s)	1526, 1783
BstNI	CCWGG	7 cut(s)	147, 472, 548, 557, 985, 1025, 1795
BstPAI	GACNNNNGTC	1 cut(s)	1782
BstSFI	CTRYAG	2 cut(s)	646, 1162
BstUI	CGCG	5 cut(s)	774, 1047, 1382, 1766, 1851
BstV1I	GCAGC	8 cut(s)	4, 311, 333, 471, 539, 543, 632, 1176
BstV2I	GAAGAC	4 cut(s)	19, 862, 888, 1429
BstX2I	RGATCY	2 cut(s)	521, 1659
BstXI	CCANNNNNNTGG	3 cut(s)	518, 1312, 1801
BstYI	RGATCY	2 cut(s)	521, 1659
Bsu36I	CCTNAGG	1 cut(s)	1485
BsuRI	GGCC	9 cut(s)	156, 1029, 1055, 1094, 1179, 1236, 1483, 1671, 1830
BtgI	CCRYGG	4 cut(s)	746, 1153, 1231, 1305
BtgZI	GCGATG	1 cut(s)	755
BtrI	CACGTC	4 cut(s)	1269, 1552, 1735, 1882
BtsCI	GGATG	6 cut(s)	228, 329, 962, 1132, 1714, 1729
BtsI	GCAGTG	1 cut(s)	807
BtsIMutI	CAGTG	2 cut(s)	463, 807
BveI	ACCTGC	1 cut(s)	1264
Cac8I	GCNNGC	6 cut(s)	15, 482, 758, 1031, 1673, 1749
CaiI	CAGNNNCTG	2 cut(s)	465, 1813
CfoI	GCGC	4 cut(s)	909, 990, 1853, 1877
Cfr10I	RCCGGY	2 cut(s)	934, 1521
Cfr13I	GGNCC	9 cut(s)	849, 1027, 1235, 1476, 1481, 1507, 1606, 1669, 1828
Cfr9I	CCCGGG	1 cut(s)	1495
CseI	GACGC	3 cut(s)	763, 1036, 1750
Csp6I	GTAC	6 cut(s)	1063, 1318, 1468, 1491, 1555, 1833
CspAI	ACCGGT	1 cut(s)	1521
CviAII	CATG	5 cut(s)	512, 747, 820, 1306, 1393
CviQI	GTAC	6 cut(s)	1063, 1318, 1468, 1491, 1555, 1833
DdeI	CTNAG	5 cut(s)	37, 58, 305, 1485, 1814
DpnI	GATC	5 cut(s)	523, 602, 1170, 1661, 1823
DpnII	GATC	5 cut(s)	521, 600, 1168, 1659, 1821
DrdI	GACNNNNNNGTC	1 cut(s)	1046
DseDI	GACNNNNNNGTC	1 cut(s)	1046
EaeI	YGGCCR	2 cut(s)	154, 1053
Eam1104I	CTCTTC	3 cut(s)	382, 945, 1235
EarI	CTCTTC	3 cut(s)	382, 945, 1235
EciI	GGCGGA	5 cut(s)	856, 907, 1655, 1784, 1834
Ecl136II	GAGCTC	1 cut(s)	607
Eco130I	CCWWGG	2 cut(s)	746, 1305
Eco147I	AGGCCT	2 cut(s)	1094, 1179
Eco24I	GRGCYC	3 cut(s)	243, 497, 609
Eco32I	GATATC	1 cut(s)	575
Eco47I	GGWCC	4 cut(s)	849, 1476, 1507, 1606
Eco53kI	GAGCTC	1 cut(s)	607
Eco72I	CACGTG	1 cut(s)	1838
Eco81I	CCTNAGG	1 cut(s)	1485
Eco88I	CYCGRG	3 cut(s)	596, 608, 1495
EcoICRI	GAGCTC	1 cut(s)	607
EcoRII	CCWGG	7 cut(s)	145, 470, 546, 555, 983, 1023, 1793
EcoRV	GATATC	1 cut(s)	575
EcoT14I	CCWWGG	2 cut(s)	746, 1305
EcoT38I	GRGCYC	3 cut(s)	243, 497, 609
ErhI	CCWWGG	2 cut(s)	746, 1305
FaeI	CATG	5 cut(s)	515, 750, 823, 1309, 1396
FaqI	GGGAC	4 cut(s)	453, 629, 1187, 1631
FatI	CATG	5 cut(s)	511, 746, 819, 1305, 1392
FauI	CCCGC	2 cut(s)	939, 998
FblI	GTMKAC	2 cut(s)	1020, 1689
FokI	GGATG	6 cut(s)	215, 316, 949, 1119, 1721, 1736
FriOI	GRGCYC	3 cut(s)	243, 497, 609
FspBI	CTAG	3 cut(s)	312, 318, 525
GlaI	GCGC	4 cut(s)	908, 989, 1852, 1876
GsaI	CCCAGC	1 cut(s)	357
GsuI	CTGGAG	1 cut(s)	887
HaeII	RGCGCY	2 cut(s)	910, 1878
HaeIII	GGCC	9 cut(s)	156, 1029, 1055, 1094, 1179, 1236, 1483, 1671, 1830
HgaI	GACGC	3 cut(s)	763, 1036, 1750
HhaI	GCGC	4 cut(s)	909, 990, 1853, 1877
Hin1I	GRCGYC	1 cut(s)	1451
Hin1II	CATG	5 cut(s)	515, 750, 823, 1309, 1396
Hin6I	GCGC	4 cut(s)	907, 988, 1851, 1875
HinP1I	GCGC	4 cut(s)	907, 988, 1851, 1875
HincII	GTYRAC	3 cut(s)	1536, 1690, 1732
HindII	GTYRAC	3 cut(s)	1536, 1690, 1732
HinfI	GANTC	3 cut(s)	629, 959, 1398
HphI	GGTGA	7 cut(s)	72, 135, 193, 268, 732, 934, 1288
Hpy166II	GTNNAC	8 cut(s)	1021, 1351, 1536, 1555, 1606, 1690, 1732, 1835
Hpy188I	TCNGA	4 cut(s)	397, 694, 1596, 1701
Hpy188III	TCNNGA	6 cut(s)	578, 598, 626, 852, 1663, 1787
Hpy8I	GTNNAC	8 cut(s)	1021, 1351, 1536, 1555, 1606, 1690, 1732, 1835
Hpy99I	CGWCG	9 cut(s)	13, 401, 779, 1004, 1052, 1453, 1456, 1459, 1766
HpyAV	CCTTC	6 cut(s)	142, 269, 1105, 1190, 1591, 1768
HpyCH4III	ACNGT	4 cut(s)	401, 467, 518, 1784
HpyCH4IV	ACGT	8 cut(s)	1200, 1268, 1451, 1470, 1551, 1734, 1837, 1881
HpyCH4V	TGCA	9 cut(s)	185, 459, 480, 648, 1101, 1164, 1297, 1324, 1807
HpyF3I	CTNAG	5 cut(s)	37, 58, 305, 1485, 1814
HpySE526I	ACGT	8 cut(s)	1200, 1268, 1451, 1470, 1551, 1734, 1837, 1881
Hsp92I	GRCGYC	1 cut(s)	1451
Hsp92II	CATG	5 cut(s)	515, 750, 823, 1309, 1396
HspAI	GCGC	4 cut(s)	907, 988, 1851, 1875
KpnI	GGTACC	1 cut(s)	1494
Kzo9I	GATC	5 cut(s)	521, 600, 1168, 1659, 1821
LguI	GCTCTTC	2 cut(s)	945, 1235
LmnI	GCTCC	6 cut(s)	365, 440, 920, 1155, 1680, 1810
Lsp1109I	GCAGC	8 cut(s)	4, 311, 333, 471, 539, 543, 632, 1176
LweI	GCATC	1 cut(s)	1780
MaeI	CTAG	3 cut(s)	312, 318, 525
MaeII	ACGT	8 cut(s)	1200, 1268, 1451, 1470, 1551, 1734, 1837, 1881
MaeIII	GTNAC	5 cut(s)	407, 802, 1499, 1547, 1717
MalI	GATC	5 cut(s)	523, 602, 1170, 1661, 1823
MbiI	CCGCTC	2 cut(s)	360, 915
MboI	GATC	5 cut(s)	521, 600, 1168, 1659, 1821
MfeI	CAATTG	1 cut(s)	1125
MflI	RGATCY	2 cut(s)	521, 1659
MhlI	GDGCHC	4 cut(s)	243, 497, 609, 791
MlsI	TGGCCA	1 cut(s)	156
MluCI	AATT	7 cut(s)	288, 454, 685, 707, 828, 974, 1125
MluNI	TGGCCA	1 cut(s)	156
MmeI	TCCRAC	4 cut(s)	420, 616, 717, 1557
Mox20I	TGGCCA	1 cut(s)	156
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	2 cut(s)	207, 291
MslI	CAYNNNNRTG	3 cut(s)	516, 745, 1310
Msp20I	TGGCCA	1 cut(s)	156
MspA1I	CMGCKG	1 cut(s)	324
MunI	CAATTG	1 cut(s)	1125
Mva1269I	GAATGC	1 cut(s)	482
MvaI	CCWGG	7 cut(s)	147, 472, 548, 557, 985, 1025, 1795
MvnI	CGCG	5 cut(s)	774, 1047, 1382, 1766, 1851
NciI	CCSGG	7 cut(s)	497, 1442, 1480, 1496, 1497, 1511, 1694
NcoI	CCATGG	2 cut(s)	746, 1305
NdeII	GATC	5 cut(s)	521, 600, 1168, 1659, 1821
NlaIII	CATG	5 cut(s)	515, 750, 823, 1309, 1396
NlaIV	GGNNCC	5 cut(s)	403, 1338, 1492, 1509, 1829
NmuCI	GTSAC	3 cut(s)	802, 1547, 1717
NspV	TTCGAA	1 cut(s)	1862
PaeR7I	CTCGAG	1 cut(s)	608
PaqCI	CACCTGC	1 cut(s)	1264
PasI	CCCWGGG	1 cut(s)	471
PceI	AGGCCT	2 cut(s)	1094, 1179
PciSI	GCTCTTC	2 cut(s)	945, 1235
PcsI	WCGNNNNNNNCGW	3 cut(s)	615, 1044, 1454
PctI	GAATGC	1 cut(s)	482
PfeI	GAWTC	3 cut(s)	629, 959, 1398
PflFI	GACNNNGTC	2 cut(s)	563, 1453
PfoI	TCCNGGA	1 cut(s)	1440
PinAI	ACCGGT	1 cut(s)	1521
PmaCI	CACGTG	1 cut(s)	1838
PmlI	CACGTG	1 cut(s)	1838
Ppu21I	YACGTR	1 cut(s)	1838
PshAI	GACNNNNGTC	1 cut(s)	1782
Psp124BI	GAGCTC	1 cut(s)	609
Psp6I	CCWGG	7 cut(s)	145, 470, 546, 555, 983, 1023, 1793
PspCI	CACGTG	1 cut(s)	1838
PspFI	CCCAGC	1 cut(s)	353
PspGI	CCWGG	7 cut(s)	145, 470, 546, 555, 983, 1023, 1793
PspN4I	GGNNCC	5 cut(s)	403, 1338, 1492, 1509, 1829
PspPI	GGNCC	9 cut(s)	849, 1027, 1235, 1476, 1481, 1507, 1606, 1669, 1828
PspXI	VCTCGAGB	1 cut(s)	608
PstI	CTGCAG	2 cut(s)	650, 1166
PstNI	CAGNNNCTG	2 cut(s)	465, 1813
PsuI	RGATCY	2 cut(s)	521, 1659
PsyI	GACNNNGTC	2 cut(s)	563, 1453
PvuII	CAGCTG	1 cut(s)	324
RsaI	GTAC	6 cut(s)	1064, 1319, 1469, 1492, 1556, 1834
RsaNI	GTAC	6 cut(s)	1063, 1318, 1468, 1491, 1555, 1833
RseI	CAYNNNNRTG	3 cut(s)	516, 745, 1310
SacI	GAGCTC	1 cut(s)	609
SalI	GTCGAC	1 cut(s)	1688
SapI	GCTCTTC	2 cut(s)	945, 1235
SaqAI	TTAA	2 cut(s)	207, 291
Sau3AI	GATC	5 cut(s)	521, 600, 1168, 1659, 1821
Sau96I	GGNCC	9 cut(s)	849, 1027, 1235, 1476, 1481, 1507, 1606, 1669, 1828
ScaI	AGTACT	1 cut(s)	1319
SduI	GDGCHC	4 cut(s)	243, 497, 609, 791
SfaNI	GCATC	1 cut(s)	1780
SfcI	CTRYAG	2 cut(s)	646, 1162
Sfr274I	CTCGAG	1 cut(s)	608
SfuI	TTCGAA	1 cut(s)	1862
SinI	GGWCC	4 cut(s)	849, 1476, 1507, 1606
SlaI	CTCGAG	1 cut(s)	608
SmaI	CCCGGG	1 cut(s)	1497
SmiMI	CAYNNNNRTG	3 cut(s)	516, 745, 1310
SmlI	CTYRAG	3 cut(s)	608, 624, 640
SmoI	CTYRAG	3 cut(s)	608, 624, 640
Sse9I	AATT	7 cut(s)	288, 454, 685, 707, 828, 974, 1125
SseBI	AGGCCT	2 cut(s)	1094, 1179
SspI	AATATT	1 cut(s)	1375
SspMI	CTAG	3 cut(s)	312, 318, 525
SstI	GAGCTC	1 cut(s)	609
StuI	AGGCCT	2 cut(s)	1094, 1179
StyI	CCWWGG	2 cut(s)	746, 1305
TaaI	ACNGT	4 cut(s)	401, 467, 518, 1784
TaiI	ACGT	8 cut(s)	1203, 1271, 1454, 1473, 1554, 1737, 1840, 1884
TaqII	GACCGA	1 cut(s)	781
TasI	AATT	7 cut(s)	288, 454, 685, 707, 828, 974, 1125
TatI	WGTACW	2 cut(s)	1317, 1554
TauI	GCSGC	7 cut(s)	360, 681, 872, 1047, 1742, 1769, 1851
TfiI	GAWTC	3 cut(s)	629, 959, 1398
Tru1I	TTAA	2 cut(s)	207, 291
Tru9I	TTAA	2 cut(s)	207, 291
TscAI	CASTG	2 cut(s)	470, 807
TseFI	GTSAC	3 cut(s)	802, 1547, 1717
TseI	GCWGC	8 cut(s)	17, 321, 324, 459, 531, 552, 645, 1164
Tsp45I	GTSAC	3 cut(s)	802, 1547, 1717
TspGWI	ACGGA	2 cut(s)	1553, 1736
TspMI	CCCGGG	1 cut(s)	1495
TspRI	CASTG	2 cut(s)	470, 807
Tth111I	GACNNNGTC	2 cut(s)	563, 1453
VpaK11BI	GGWCC	4 cut(s)	849, 1476, 1507, 1606
XapI	RAATTY	1 cut(s)	974
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1663
XhoI	CTCGAG	1 cut(s)	608
XmaI	CCCGGG	1 cut(s)	1495
XmiI	GTMKAC	2 cut(s)	1020, 1689
XspI	CTAG	3 cut(s)	312, 318, 525
ZraI	GACGTC	1 cut(s)	1452
ZrmI	AGTACT	1 cut(s)	1319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.