Small nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23930 AT3G11500 AT3G11500 |
| fragaria_vesca | FvH4_6g19160 |
| malus_domestica | MD12G1027400.v1.1 |
| prunus_persica | Prupe.7G104100_v2.0.a1 |
| pyrus_communis | pycom12g02630 pycom14g02630 |
| rosa_chinensis | RchiOBHm_Chr3g0456431 RchiOBHm_Chr3g0474271 |
| rosa_multiflora | Rmu_sc0000041.1_g000021 Rmu_sc0004507.1_g000019 Rmu_sc0007753.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00407390 |
| rosa_rugosa | Rorug03G0110900 Rorug03G0139900 Rorug03G0343100 Rorug04G0442800 Rorug05G0558300 |
| rosa_samantha | Rh1AG194800 Rh2BG255200 Rh7BG169600 |
| rosa_wichuraiana | Rw3G017380 Rw3G018710 Rw5G014960 Rw7G015750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 33 |
| AcoI | YGGCCR | 1 cut(s) | 228 |
| AfaI | GTAC | 1 cut(s) | 38 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 22 |
| AgsI | TTSAA | 3 cut(s) | 56, 212, 221 |
| AluBI | AGCT | 2 cut(s) | 52, 64 |
| AluI | AGCT | 2 cut(s) | 52, 64 |
| AlwI | GGATC | 1 cut(s) | 33 |
| AoxI | GGCC | 2 cut(s) | 13, 228 |
| AsuC2I | CCSGG | 1 cut(s) | 23 |
| AsuHPI | GGTGA | 2 cut(s) | 164, 193 |
| BalI | TGGCCA | 1 cut(s) | 230 |
| BclI | TGATCA | 1 cut(s) | 183 |
| BcnI | CCSGG | 1 cut(s) | 23 |
| BfmI | CTRYAG | 1 cut(s) | 138 |
| Bme1390I | CCNGG | 1 cut(s) | 23 |
| BmiI | GGNNCC | 1 cut(s) | 91 |
| BmrFI | CCNGG | 1 cut(s) | 23 |
| BpuEI | CTTGAG | 1 cut(s) | 14 |
| BpuMI | CCSGG | 1 cut(s) | 23 |
| BsaJI | CCNNGG | 1 cut(s) | 21 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 22 |
| Bse1I | ACTGG | 1 cut(s) | 109 |
| BseDI | CCNNGG | 1 cut(s) | 21 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 22 |
| BseNI | ACTGG | 1 cut(s) | 109 |
| BshFI | GGCC | 2 cut(s) | 15, 230 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 22 |
| BsnI | GGCC | 2 cut(s) | 15, 230 |
| Bsp143I | GATC | 2 cut(s) | 25, 183 |
| BspANI | GGCC | 2 cut(s) | 15, 230 |
| BspHI | TCATGA | 1 cut(s) | 114 |
| BspLI | GGNNCC | 1 cut(s) | 91 |
| BspPI | GGATC | 1 cut(s) | 33 |
| BsrI | ACTGG | 1 cut(s) | 109 |
| BssECI | CCNNGG | 1 cut(s) | 21 |
| BssMI | GATC | 2 cut(s) | 25, 183 |
| Bst4CI | ACNGT | 3 cut(s) | 139, 197, 208 |
| BstC8I | GCNNGC | 1 cut(s) | 17 |
| BstKTI | GATC | 2 cut(s) | 28, 186 |
| BstMBI | GATC | 2 cut(s) | 25, 183 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 12 |
| BstSCI | CCNGG | 1 cut(s) | 21 |
| BstSFI | CTRYAG | 1 cut(s) | 138 |
| BstX2I | RGATCY | 1 cut(s) | 25 |
| BstYI | RGATCY | 1 cut(s) | 25 |
| BsuRI | GGCC | 2 cut(s) | 15, 230 |
| BtsIMutI | CAGTG | 2 cut(s) | 135, 202 |
| Cac8I | GCNNGC | 1 cut(s) | 17 |
| CciI | TCATGA | 1 cut(s) | 114 |
| Csp6I | GTAC | 1 cut(s) | 37 |
| CviAII | CATG | 3 cut(s) | 40, 115, 175 |
| CviJI | RGCY | 5 cut(s) | 15, 19, 52, 64, 230 |
| CviKI_1 | RGCY | 5 cut(s) | 15, 19, 52, 64, 230 |
| CviQI | GTAC | 1 cut(s) | 37 |
| DpnI | GATC | 2 cut(s) | 27, 185 |
| DpnII | GATC | 2 cut(s) | 25, 183 |
| EaeI | YGGCCR | 1 cut(s) | 228 |
| FaeI | CATG | 3 cut(s) | 43, 118, 178 |
| FaiI | YATR | 4 cut(s) | 41, 116, 170, 176 |
| FatI | CATG | 3 cut(s) | 39, 114, 174 |
| FbaI | TGATCA | 1 cut(s) | 183 |
| HaeIII | GGCC | 2 cut(s) | 15, 230 |
| HapII | CCGG | 1 cut(s) | 23 |
| Hin1II | CATG | 3 cut(s) | 43, 118, 178 |
| HindIII | AAGCTT | 1 cut(s) | 50 |
| HinfI | GANTC | 1 cut(s) | 118 |
| HpaII | CCGG | 1 cut(s) | 23 |
| HphI | GGTGA | 2 cut(s) | 164, 193 |
| Hpy188I | TCNGA | 1 cut(s) | 188 |
| Hpy188III | TCNNGA | 2 cut(s) | 31, 115 |
| HpyCH4III | ACNGT | 3 cut(s) | 139, 197, 208 |
| HpyCH4V | TGCA | 2 cut(s) | 71, 238 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 12 |
| Hsp92II | CATG | 3 cut(s) | 43, 118, 178 |
| Ksp22I | TGATCA | 1 cut(s) | 183 |
| Kzo9I | GATC | 2 cut(s) | 25, 183 |
| LpnPI | CCDG | 5 cut(s) | 29, 36, 107, 122, 237 |
| MaeIII | GTNAC | 1 cut(s) | 202 |
| MalI | GATC | 2 cut(s) | 27, 185 |
| MboI | GATC | 2 cut(s) | 25, 183 |
| MflI | RGATCY | 1 cut(s) | 25 |
| MlsI | TGGCCA | 1 cut(s) | 230 |
| MluNI | TGGCCA | 1 cut(s) | 230 |
| MnlI | CCTC | 1 cut(s) | 182 |
| Mox20I | TGGCCA | 1 cut(s) | 230 |
| MscI | TGGCCA | 1 cut(s) | 230 |
| MslI | CAYNNNNRTG | 2 cut(s) | 173, 179 |
| Msp20I | TGGCCA | 1 cut(s) | 230 |
| MspI | CCGG | 1 cut(s) | 23 |
| MspR9I | CCNGG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 12 |
| NciI | CCSGG | 1 cut(s) | 23 |
| NdeII | GATC | 2 cut(s) | 25, 183 |
| NlaIII | CATG | 3 cut(s) | 43, 118, 178 |
| NlaIV | GGNNCC | 1 cut(s) | 91 |
| PagI | TCATGA | 1 cut(s) | 114 |
| PfeI | GAWTC | 1 cut(s) | 118 |
| PspN4I | GGNNCC | 1 cut(s) | 91 |
| PsuI | RGATCY | 1 cut(s) | 25 |
| RsaI | GTAC | 1 cut(s) | 38 |
| RsaNI | GTAC | 1 cut(s) | 37 |
| RseI | CAYNNNNRTG | 2 cut(s) | 173, 179 |
| Sau3AI | GATC | 2 cut(s) | 25, 183 |
| ScrFI | CCNGG | 1 cut(s) | 23 |
| SetI | ASST | 5 cut(s) | 11, 54, 66, 95, 226 |
| SfcI | CTRYAG | 1 cut(s) | 138 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 173, 179 |
| SmlI | CTYRAG | 1 cut(s) | 29 |
| SmoI | CTYRAG | 1 cut(s) | 29 |
| StyD4I | CCNGG | 1 cut(s) | 21 |
| TaaI | ACNGT | 3 cut(s) | 139, 197, 208 |
| TaqII | GACCGA | 1 cut(s) | 179 |
| TatI | WGTACW | 1 cut(s) | 36 |
| TfiI | GAWTC | 1 cut(s) | 118 |
| TscAI | CASTG | 2 cut(s) | 142, 202 |
| TspDTI | ATGAA | 3 cut(s) | 103, 131, 171 |
| TspRI | CASTG | 2 cut(s) | 142, 202 |