Small nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23930 AT3G11500 AT3G11500 |
| fragaria_vesca | FvH4_6g19160 |
| malus_domestica | MD12G1027400.v1.1 |
| prunus_persica | Prupe.7G104100_v2.0.a1 |
| pyrus_communis | pycom12g02630 pycom14g02630 |
| rosa_chinensis | RchiOBHm_Chr3g0456431 RchiOBHm_Chr3g0474271 |
| rosa_multiflora | Rmu_sc0000041.1_g000021 Rmu_sc0004507.1_g000019 Rmu_sc0007753.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00407390 |
| rosa_rugosa | Rorug03G0110900 Rorug03G0139900 Rorug03G0343100 Rorug04G0442800 Rorug05G0558300 |
| rosa_samantha | Rh1AG194800 Rh2BG255200 Rh7BG169600 |
| rosa_wichuraiana | Rw3G017380 Rw3G018710 Rw5G014960 Rw7G015750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 262 |
| AclWI | GGATC | 1 cut(s) | 186 |
| AcsI | RAATTY | 1 cut(s) | 122 |
| AcuI | CTGAAG | 1 cut(s) | 38 |
| AfaI | GTAC | 1 cut(s) | 33 |
| AgsI | TTSAA | 3 cut(s) | 67, 170, 313 |
| Alw26I | GTCTC | 1 cut(s) | 92 |
| AlwI | GGATC | 1 cut(s) | 186 |
| ApeKI | GCWGC | 1 cut(s) | 249 |
| ApoI | RAATTY | 1 cut(s) | 122 |
| AspS9I | GGNCC | 2 cut(s) | 202, 242 |
| AsuHPI | GGTGA | 1 cut(s) | 145 |
| AsuNHI | GCTAGC | 1 cut(s) | 182 |
| AvaII | GGWCC | 2 cut(s) | 202, 242 |
| BbvI | GCAGC | 1 cut(s) | 236 |
| BcoDI | GTCTC | 1 cut(s) | 92 |
| BfaI | CTAG | 1 cut(s) | 183 |
| BisI | GCNGC | 1 cut(s) | 250 |
| BlsI | GCNGC | 1 cut(s) | 251 |
| Bme18I | GGWCC | 2 cut(s) | 202, 242 |
| BmgT120I | GGNCC | 2 cut(s) | 202, 242 |
| BmiI | GGNNCC | 1 cut(s) | 177 |
| BmtI | GCTAGC | 1 cut(s) | 186 |
| BsaI | GGTCTC | 1 cut(s) | 92 |
| Bse1I | ACTGG | 2 cut(s) | 114, 145 |
| BseMII | CTCAG | 1 cut(s) | 64 |
| BseNI | ACTGG | 2 cut(s) | 114, 145 |
| BseRI | GAGGAG | 1 cut(s) | 144 |
| BseXI | GCAGC | 1 cut(s) | 236 |
| BsmAI | GTCTC | 1 cut(s) | 92 |
| Bso31I | GGTCTC | 1 cut(s) | 92 |
| Bsp143I | GATC | 1 cut(s) | 191 |
| BspCNI | CTCAG | 1 cut(s) | 63 |
| BspLI | GGNNCC | 1 cut(s) | 177 |
| BspOI | GCTAGC | 1 cut(s) | 186 |
| BspPI | GGATC | 1 cut(s) | 186 |
| BspTNI | GGTCTC | 1 cut(s) | 92 |
| BsrI | ACTGG | 2 cut(s) | 114, 145 |
| BssMI | GATC | 1 cut(s) | 191 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| BstC8I | GCNNGC | 1 cut(s) | 184 |
| BstDEI | CTNAG | 1 cut(s) | 50 |
| BstKTI | GATC | 1 cut(s) | 194 |
| BstMAI | GTCTC | 1 cut(s) | 92 |
| BstMBI | GATC | 1 cut(s) | 191 |
| BstV1I | GCAGC | 1 cut(s) | 236 |
| BstX2I | RGATCY | 1 cut(s) | 191 |
| BstYI | RGATCY | 1 cut(s) | 191 |
| BtsIMutI | CAGTG | 2 cut(s) | 72, 138 |
| Cac8I | GCNNGC | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 2 cut(s) | 202, 242 |
| Csp6I | GTAC | 1 cut(s) | 32 |
| CviAII | CATG | 1 cut(s) | 246 |
| CviJI | RGCY | 2 cut(s) | 5, 234 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 234 |
| CviQI | GTAC | 1 cut(s) | 32 |
| DdeI | CTNAG | 1 cut(s) | 50 |
| DpnI | GATC | 1 cut(s) | 193 |
| DpnII | GATC | 1 cut(s) | 191 |
| Eco31I | GGTCTC | 1 cut(s) | 92 |
| Eco47I | GGWCC | 2 cut(s) | 202, 242 |
| Eco57I | CTGAAG | 1 cut(s) | 38 |
| FaeI | CATG | 1 cut(s) | 249 |
| FaiI | YATR | 2 cut(s) | 247, 337 |
| FatI | CATG | 1 cut(s) | 245 |
| FblI | GTMKAC | 1 cut(s) | 262 |
| Fnu4HI | GCNGC | 1 cut(s) | 250 |
| Fsp4HI | GCNGC | 1 cut(s) | 250 |
| FspBI | CTAG | 1 cut(s) | 183 |
| GluI | GCNGC | 1 cut(s) | 250 |
| Hin1II | CATG | 1 cut(s) | 249 |
| HincII | GTYRAC | 1 cut(s) | 263 |
| HindII | GTYRAC | 1 cut(s) | 263 |
| HinfI | GANTC | 1 cut(s) | 166 |
| HphI | GGTGA | 1 cut(s) | 145 |
| Hpy166II | GTNNAC | 2 cut(s) | 263, 318 |
| Hpy188I | TCNGA | 4 cut(s) | 18, 53, 106, 128 |
| Hpy8I | GTNNAC | 2 cut(s) | 263, 318 |
| HpyAV | CCTTC | 1 cut(s) | 295 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 1 cut(s) | 252 |
| HpyF3I | CTNAG | 1 cut(s) | 50 |
| Hsp92II | CATG | 1 cut(s) | 249 |
| Kzo9I | GATC | 1 cut(s) | 191 |
| LpnPI | CCDG | 5 cut(s) | 95, 126, 173, 192, 269 |
| Lsp1109I | GCAGC | 1 cut(s) | 236 |
| MaeI | CTAG | 1 cut(s) | 183 |
| MalI | GATC | 1 cut(s) | 193 |
| MboI | GATC | 1 cut(s) | 191 |
| MboII | GAAGA | 2 cut(s) | 3, 175 |
| MflI | RGATCY | 1 cut(s) | 191 |
| MluCI | AATT | 3 cut(s) | 56, 122, 228 |
| MnlI | CCTC | 5 cut(s) | 112, 122, 125, 215, 233 |
| NdeII | GATC | 1 cut(s) | 191 |
| NheI | GCTAGC | 1 cut(s) | 182 |
| NlaIII | CATG | 1 cut(s) | 249 |
| NlaIV | GGNNCC | 1 cut(s) | 177 |
| PfeI | GAWTC | 1 cut(s) | 166 |
| PkrI | GCNGC | 1 cut(s) | 251 |
| PspN4I | GGNNCC | 1 cut(s) | 177 |
| PspPI | GGNCC | 2 cut(s) | 202, 242 |
| PsuI | RGATCY | 1 cut(s) | 191 |
| RsaI | GTAC | 1 cut(s) | 33 |
| RsaNI | GTAC | 1 cut(s) | 32 |
| SalI | GTCGAC | 1 cut(s) | 261 |
| SatI | GCNGC | 1 cut(s) | 250 |
| Sau3AI | GATC | 1 cut(s) | 191 |
| Sau96I | GGNCC | 2 cut(s) | 202, 242 |
| SetI | ASST | 4 cut(s) | 87, 104, 136, 258 |
| SinI | GGWCC | 2 cut(s) | 202, 242 |
| Sse9I | AATT | 3 cut(s) | 56, 122, 228 |
| SspMI | CTAG | 1 cut(s) | 183 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TaqI | TCGA | 1 cut(s) | 262 |
| TasI | AATT | 3 cut(s) | 56, 122, 228 |
| TfiI | GAWTC | 1 cut(s) | 166 |
| TscAI | CASTG | 2 cut(s) | 79, 145 |
| TseI | GCWGC | 1 cut(s) | 249 |
| TspGWI | ACGGA | 1 cut(s) | 252 |
| TspRI | CASTG | 2 cut(s) | 79, 145 |
| VpaK11BI | GGWCC | 2 cut(s) | 202, 242 |
| XapI | RAATTY | 1 cut(s) | 122 |
| XmiI | GTMKAC | 1 cut(s) | 262 |
| XspI | CTAG | 1 cut(s) | 183 |