Prupe.7G131400_v2.0.a1

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
15053725 .. 15057247
3523 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G131400.8

Sequence Viewer

Length: 1386 bp
ATGCAAACCAGCCCACTCTGCCACACTCCCAGACGCAACAAATCGTCAAACTCCAAATTAAAAGCCAAAGCAAACACACCCACTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCACATACCCAAAACCTCAAAACAACACCAGAACCAAAAACAGAGGAGAAAAAGAAACCAGAGAGTGATGGGGGATACTTATGATCATTATTACAAAAATGCCACTTGTTCTTCTTCACCTTCTGCGTCAGTTTCTCCAGCTGCTGCTGCTGCTCCTTCTCAGCCTCCTTCGACGTCCGACGAAATTTCTCTTTTTCTGCAGCAGATTTTGCTCCGTTCGTCTAGTTCTCTGGCCTCGGTGGTGGCCCACACGGGCAAGGCCCCGCAGTTTTTGTTTTCATCGTCTCCGTCCGTTGCTGCTCTGCCTGATCATCTCAGCCGTCCGTGCCACTCCATGTTCCTAGGGGACGGGATCACGGCCGTTGATTCTTCCGCCGCGCTTTTGCCGGCGGGGAATCCCAATGTGTCTTCCTCTTCGTTCGGAGCGAGTGAGAATGAGACGGACGAGTATGATTGTGAAAGCGAGGAGGGTCTTGAAGCATTGGTGGAAGAGGCGGCAGGGAAGCCAGGGTGTGGTCGAAGTTCTTCAAAGAGAAGCAGAGCTGCAGAAGTCCATAATATGTCTGAAAAGAGGAGGAGGAGTAGGATTAATGAGAAAATGAAGGCATTGCAAAATCTTATCCCAAATTCTAATAAGACGGATAAGGCTTCAATGCTTGATGAAGCCATTGAGTACCTCAAGCAGCTTCAGCTCCAAGTGCAGATGTTATCAATGAGAAATGGCATGAGTCTGCATCCTATGTGCCTACCTGGAGCGCTGCAACCTGTCCAAGTCTCCCAGATGAGAATGGACCTTGGTGAAGAAAATAGGCCTCTGCATTTGGACATGACAGGCACACTGCTTATGAACCAGGAATCTCCAACACAAAATTTGTTCCATTTCTCCAACCAATGCACCGATGCAAACCAGTCATATGTACCAGACATGTCAAATGTAGTTAATTCAGAAACCTCGTTTGGGTTGGAATCGTCAATGCGGGCTCACTTGGGACCCTTTCAACTACCAAACTCATCCGAGGAAATCTGTAGGGAGGACATGTTGCAGCATCAACAAATTAATGTAAATCATTCGGAGACGAATCCTTTAGAATTTGAATTGGGAGCGACCGCTAGAGTTTCACTTTCCTTTAACACACAAGTATCTGATCTGAAAGGCAGTAGTTCTCTGGGAGCATGTATCACAGGAAGAAACCGGCAGGAAGGTCTACTTTTAAAGGCTATGAAACAAAATTTTCATATTGATAGGAAGAAGAAGGGTTGCAAATGA

Protein Analysis

462

Amino Acids

50.48

Weight (kDa)

8.6

Isoelectric Point (pI)

66.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 296
AccB7I CCANNNNNTGG 1 cut(s) 632
AccI GTMKAC 1 cut(s) 1324
AccII CGCG 1 cut(s) 497
AciI CCGC 7 cut(s) 383, 492, 495, 509, 614, 1096, 1227
AclWI GGATC 1 cut(s) 479
AcoI YGGCCR 1 cut(s) 477
AcsI RAATTY 5 cut(s) 303, 745, 988, 1208, 1348
AcuI CTGAAG 1 cut(s) 791
AcyI GRCGYC 1 cut(s) 293
AfaI GTAC 2 cut(s) 794, 1038
AfeI AGCGCT 1 cut(s) 876
AfiI CCNNNNNNNGG 2 cut(s) 632, 1077
AflIII ACRYGT 2 cut(s) 1044, 1155
AgsI TTSAA 5 cut(s) 596, 648, 771, 1118, 1214
AjnI CCWGG 3 cut(s) 625, 868, 969
AjuI GAANNNNNNNTTGG 2 cut(s) 1059, 1091
AluBI AGCT 4 cut(s) 260, 662, 805, 811
AluI AGCT 4 cut(s) 260, 662, 805, 811
Alw26I GTCTC 4 cut(s) 408, 551, 898, 1187
AlwI GGATC 1 cut(s) 479
AlwNI CAGNNNCTG 1 cut(s) 263
Aor51HI AGCGCT 1 cut(s) 876
AoxI GGCC 5 cut(s) 351, 363, 378, 477, 929
ApoI RAATTY 5 cut(s) 303, 745, 988, 1208, 1348
AseI ATTAAT 2 cut(s) 708, 1176
Asp700I GAANNNNTTC 1 cut(s) 643
AspA2I CCTAGG 1 cut(s) 460
AspLEI GCGC 2 cut(s) 499, 877
AspS9I GGNCC 4 cut(s) 364, 379, 910, 1109
AsuHPI GGTGA 2 cut(s) 228, 929
AvaII GGWCC 2 cut(s) 910, 1109
AvrII CCTAGG 1 cut(s) 460
BaeI ACNNNNGTAYC 2 cut(s) 1242, 1275
BanII GRGCYC 1 cut(s) 1102
BbsI GAAGAC 1 cut(s) 519
BccI CCATC 1 cut(s) 181
BceAI ACGGC 3 cut(s) 423, 464, 492
BciT130I CCWGG 3 cut(s) 627, 870, 971
BciVI GTATCC 1 cut(s) 187
BclI TGATCA 2 cut(s) 202, 427
BcoDI GTCTC 4 cut(s) 408, 551, 898, 1187
BfaI CTAG 3 cut(s) 342, 461, 1230
BfmI CTRYAG 3 cut(s) 317, 663, 1144
BfoI RGCGCY 1 cut(s) 878
BfuI GTATCC 1 cut(s) 187
BlnI CCTAGG 1 cut(s) 460
Bme1390I CCNGG 3 cut(s) 627, 870, 971
Bme18I GGWCC 2 cut(s) 910, 1109
BmgT120I GGNCC 4 cut(s) 364, 379, 910, 1109
BmiI GGNNCC 3 cut(s) 381, 1110, 1111
BmrFI CCNGG 3 cut(s) 627, 870, 971
BmsI GCATC 3 cut(s) 862, 1009, 1174
BpiI GAAGAC 1 cut(s) 519
BpmI CTGGAG 2 cut(s) 240, 891
BpuEI CTTGAG 1 cut(s) 782
BsaHI GRCGYC 1 cut(s) 293
BsaJI CCNNGG 5 cut(s) 354, 460, 626, 913, 1134
BsaXI ACNNNNNCTCC 4 cut(s) 685, 715, 1142, 1172
Bsc4I CCNNNNNNNGG 2 cut(s) 632, 1077
Bse118I RCCGGY 2 cut(s) 505, 1311
Bse1I ACTGG 1 cut(s) 1027
Bse3DI GCAATG 1 cut(s) 725
BseBI CCWGG 3 cut(s) 627, 870, 971
BseDI CCNNGG 5 cut(s) 354, 460, 626, 913, 1134
BseGI GGATG 2 cut(s) 853, 1130
BseLI CCNNNNNNNGG 2 cut(s) 632, 1077
BseMI GCAATG 1 cut(s) 725
BseMII CTCAG 2 cut(s) 293, 448
BseNI ACTGG 1 cut(s) 1027
BseRI GAGGAG 5 cut(s) 178, 599, 706, 709, 712
BseX3I CGGCCG 1 cut(s) 477
BsgI GTGCAG 1 cut(s) 839
Bsh1236I CGCG 1 cut(s) 497
Bsh1285I CGRYCG 2 cut(s) 480, 1227
BshFI GGCC 5 cut(s) 353, 365, 380, 479, 931
BsiEI CGRYCG 2 cut(s) 480, 1227
BsiSI CCGG 2 cut(s) 506, 1312
BslFI GGGAC 2 cut(s) 479, 1122
BslI CCNNNNNNNGG 2 cut(s) 632, 1077
BsmAI GTCTC 4 cut(s) 408, 551, 898, 1187
BsmBI CGTCTC 3 cut(s) 408, 551, 1187
BsmFI GGGAC 2 cut(s) 479, 1122
BsnI GGCC 5 cut(s) 353, 365, 380, 479, 931
Bsp1286I GDGCHC 1 cut(s) 1102
Bsp143I GATC 4 cut(s) 202, 427, 471, 1264
BspACI CCGC 7 cut(s) 383, 492, 495, 509, 614, 1096, 1227
BspANI GGCC 5 cut(s) 353, 365, 380, 479, 931
BspCNI CTCAG 2 cut(s) 292, 447
BspFNI CGCG 1 cut(s) 497
BspLI GGNNCC 3 cut(s) 381, 1110, 1111
BspMAI CTGCAG 2 cut(s) 321, 667
BspPI GGATC 1 cut(s) 479
BsrDI GCAATG 1 cut(s) 725
BsrFI RCCGGY 2 cut(s) 505, 1311
BsrI ACTGG 1 cut(s) 1027
BssAI RCCGGY 2 cut(s) 505, 1311
BssECI CCNNGG 5 cut(s) 354, 460, 626, 913, 1134
BssMI GATC 4 cut(s) 202, 427, 471, 1264
BssNI GRCGYC 1 cut(s) 293
BssT1I CCWWGG 2 cut(s) 460, 913
Bst2UI CCWGG 3 cut(s) 627, 870, 971
Bst6I CTCTTC 2 cut(s) 538, 603
BstACI GRCGYC 1 cut(s) 293
BstAPI GCANNNNNTGC 1 cut(s) 328
BstC8I GCNNGC 2 cut(s) 507, 1098
BstDEI CTNAG 2 cut(s) 279, 434
BstF5I GGATG 2 cut(s) 853, 1130
BstFNI CGCG 1 cut(s) 497
BstH2I RGCGCY 1 cut(s) 878
BstHHI GCGC 2 cut(s) 499, 877
BstKTI GATC 4 cut(s) 205, 430, 474, 1267
BstMAI GTCTC 4 cut(s) 408, 551, 898, 1187
BstMBI GATC 4 cut(s) 202, 427, 471, 1264
BstMCI CGRYCG 2 cut(s) 480, 1227
BstMWI GCNNNNNNNGC 7 cut(s) 18, 266, 269, 328, 444, 808, 817
BstNI CCWGG 3 cut(s) 627, 870, 971
BstNSI RCATGY 3 cut(s) 1048, 1159, 1296
BstSCI CCNGG 3 cut(s) 625, 868, 969
BstSFI CTRYAG 3 cut(s) 317, 663, 1144
BstUI CGCG 1 cut(s) 497
BstV2I GAAGAC 1 cut(s) 519
BstZI CGGCCG 1 cut(s) 477
BsuI GTATCC 1 cut(s) 187
BsuRI GGCC 5 cut(s) 353, 365, 380, 479, 931
BtsCI GGATG 2 cut(s) 853, 1130
BtsI GCAGTG 1 cut(s) 956
BtsIMutI CAGTG 1 cut(s) 956
Cac8I GCNNGC 2 cut(s) 507, 1098
CaiI CAGNNNCTG 1 cut(s) 263
CfoI GCGC 2 cut(s) 499, 877
Cfr10I RCCGGY 2 cut(s) 505, 1311
Cfr13I GGNCC 4 cut(s) 364, 379, 910, 1109
CseI GACGC 2 cut(s) 42, 234
Csp6I GTAC 2 cut(s) 793, 1037
CviAII CATG 6 cut(s) 454, 844, 946, 1045, 1156, 1293
CviQI GTAC 2 cut(s) 793, 1037
DdeI CTNAG 2 cut(s) 279, 434
DpnI GATC 4 cut(s) 204, 429, 473, 1266
DpnII GATC 4 cut(s) 202, 427, 471, 1264
DraI TTTAAA 1 cut(s) 1332
EaeI YGGCCR 1 cut(s) 477
EagI CGGCCG 1 cut(s) 477
Eam1104I CTCTTC 2 cut(s) 538, 603
EarI CTCTTC 2 cut(s) 538, 603
EciI GGCGGA 1 cut(s) 481
EclXI CGGCCG 1 cut(s) 477
Eco130I CCWWGG 2 cut(s) 460, 913
Eco147I AGGCCT 1 cut(s) 931
Eco24I GRGCYC 1 cut(s) 1102
Eco47I GGWCC 2 cut(s) 910, 1109
Eco47III AGCGCT 1 cut(s) 876
Eco52I CGGCCG 1 cut(s) 477
Eco57I CTGAAG 1 cut(s) 791
EcoO109I RGGNCCY 2 cut(s) 379, 1109
EcoRII CCWGG 3 cut(s) 625, 868, 969
EcoT14I CCWWGG 2 cut(s) 460, 913
EcoT38I GRGCYC 1 cut(s) 1102
ErhI CCWWGG 2 cut(s) 460, 913
Esp3I CGTCTC 3 cut(s) 408, 551, 1187
FaeI CATG 6 cut(s) 457, 847, 949, 1048, 1159, 1296
FalI AAGNNNNNCTT 2 cut(s) 1311, 1343
FaqI GGGAC 2 cut(s) 479, 1122
FatI CATG 6 cut(s) 453, 843, 945, 1044, 1155, 1292
FauI CCCGC 3 cut(s) 390, 502, 1089
FauNDI CATATG 1 cut(s) 1033
FbaI TGATCA 2 cut(s) 202, 427
FblI GTMKAC 1 cut(s) 1324
FokI GGATG 2 cut(s) 840, 1117
FriOI GRGCYC 1 cut(s) 1102
FspBI CTAG 3 cut(s) 342, 461, 1230
GlaI GCGC 2 cut(s) 498, 876
GsuI CTGGAG 2 cut(s) 240, 891
HaeII RGCGCY 1 cut(s) 878
HaeIII GGCC 5 cut(s) 353, 365, 380, 479, 931
HapII CCGG 2 cut(s) 506, 1312
HgaI GACGC 2 cut(s) 42, 234
HhaI GCGC 2 cut(s) 499, 877
Hin1I GRCGYC 1 cut(s) 293
Hin1II CATG 6 cut(s) 457, 847, 949, 1048, 1159, 1296
Hin6I GCGC 2 cut(s) 497, 875
HinP1I GCGC 2 cut(s) 497, 875
HinfI GANTC 6 cut(s) 485, 514, 847, 974, 1085, 1198
HpaII CCGG 2 cut(s) 506, 1312
HphI GGTGA 2 cut(s) 228, 929
Hpy166II GTNNAC 1 cut(s) 1325
Hpy188I TCNGA 8 cut(s) 298, 542, 685, 1066, 1135, 1192, 1264, 1269
Hpy188III TCNNGA 1 cut(s) 593
Hpy8I GTNNAC 1 cut(s) 1325
Hpy99I CGWCG 2 cut(s) 295, 302
HpyAV CCTTC 6 cut(s) 249, 285, 297, 715, 1313, 1366
HpyCH4IV ACGT 1 cut(s) 293
HpyF10VI GCNNNNNNNGC 7 cut(s) 18, 266, 269, 328, 444, 808, 817
HpyF3I CTNAG 2 cut(s) 279, 434
HpySE526I ACGT 1 cut(s) 293
Hsp92I GRCGYC 1 cut(s) 293
Hsp92II CATG 6 cut(s) 457, 847, 949, 1048, 1159, 1296
HspAI GCGC 2 cut(s) 497, 875
KflI GGGWCCC 1 cut(s) 1109
KroI GCCGGC 1 cut(s) 505
KroNI GCCGGC 1 cut(s) 507
Ksp22I TGATCA 2 cut(s) 202, 427
Kzo9I GATC 4 cut(s) 202, 427, 471, 1264
LmnI GCTCC 7 cut(s) 277, 336, 542, 816, 872, 1220, 1289
LweI GCATC 3 cut(s) 862, 1009, 1174
MaeI CTAG 3 cut(s) 342, 461, 1230
MaeII ACGT 1 cut(s) 293
MalI GATC 4 cut(s) 204, 429, 473, 1266
MboI GATC 4 cut(s) 202, 427, 471, 1264
MhlI GDGCHC 1 cut(s) 1102
MluCI AATT 9 cut(s) 56, 303, 745, 988, 1060, 1173, 1208, 1214, 1348
MlyI GAGTC 1 cut(s) 856
MmeI TCCRAC 4 cut(s) 321, 1004, 1029, 1062
MroNI GCCGGC 1 cut(s) 505
MroXI GAANNNNTTC 1 cut(s) 643
MseI TTAA 6 cut(s) 59, 708, 1059, 1176, 1248, 1331
MspA1I CMGCKG 1 cut(s) 260
MspI CCGG 2 cut(s) 506, 1312
MspR9I CCNGG 3 cut(s) 627, 870, 971
MvaI CCWGG 3 cut(s) 627, 870, 971
MvnI CGCG 1 cut(s) 497
MwoI GCNNNNNNNGC 7 cut(s) 18, 266, 269, 328, 444, 808, 817
NaeI GCCGGC 1 cut(s) 507
NdeI CATATG 1 cut(s) 1033
NdeII GATC 4 cut(s) 202, 427, 471, 1264
NgoMIV GCCGGC 1 cut(s) 505
NlaIII CATG 6 cut(s) 457, 847, 949, 1048, 1159, 1296
NlaIV GGNNCC 3 cut(s) 381, 1110, 1111
NspI RCATGY 3 cut(s) 1048, 1159, 1296
PceI AGGCCT 1 cut(s) 931
PciI ACATGT 2 cut(s) 1044, 1155
PcsI WCGNNNNNNNCGW 1 cut(s) 542
PdiI GCCGGC 1 cut(s) 507
PdmI GAANNNNTTC 1 cut(s) 643
PfeI GAWTC 5 cut(s) 485, 514, 974, 1085, 1198
PflMI CCANNNNNTGG 1 cut(s) 632
PleI GAGTC 1 cut(s) 855
PpsI GAGTC 1 cut(s) 855
PpuMI RGGWCCY 1 cut(s) 1109
PscI ACATGT 2 cut(s) 1044, 1155
PshBI ATTAAT 2 cut(s) 708, 1176
Psp5II RGGWCCY 1 cut(s) 1109
Psp6I CCWGG 3 cut(s) 625, 868, 969
PspGI CCWGG 3 cut(s) 625, 868, 969
PspN4I GGNNCC 3 cut(s) 381, 1110, 1111
PspPI GGNCC 4 cut(s) 364, 379, 910, 1109
PspPPI RGGWCCY 1 cut(s) 1109
PstI CTGCAG 2 cut(s) 321, 667
PstNI CAGNNNCTG 1 cut(s) 263
PvuII CAGCTG 1 cut(s) 260
RsaI GTAC 2 cut(s) 794, 1038
RsaNI GTAC 2 cut(s) 793, 1037
SaqAI TTAA 6 cut(s) 59, 708, 1059, 1176, 1248, 1331
Sau3AI GATC 4 cut(s) 202, 427, 471, 1264
Sau96I GGNCC 4 cut(s) 364, 379, 910, 1109
SchI GAGTC 1 cut(s) 856
ScrFI CCNGG 3 cut(s) 627, 870, 971
SduI GDGCHC 1 cut(s) 1102
SfaNI GCATC 3 cut(s) 862, 1009, 1174
SfcI CTRYAG 3 cut(s) 317, 663, 1144
SinI GGWCC 2 cut(s) 910, 1109
SmlI CTYRAG 1 cut(s) 797
SmoI CTYRAG 1 cut(s) 797
Sse9I AATT 9 cut(s) 56, 303, 745, 988, 1060, 1173, 1208, 1214, 1348
SseBI AGGCCT 1 cut(s) 931
SsiI CCGC 7 cut(s) 383, 492, 495, 509, 614, 1096, 1227
SspMI CTAG 3 cut(s) 342, 461, 1230
StuI AGGCCT 1 cut(s) 931
StyD4I CCNGG 3 cut(s) 625, 868, 969
StyI CCWWGG 2 cut(s) 460, 913
TaiI ACGT 1 cut(s) 296
TaqI TCGA 2 cut(s) 290, 637
TasI AATT 9 cut(s) 56, 303, 745, 988, 1060, 1173, 1208, 1214, 1348
TauI GCSGC 2 cut(s) 497, 617
TfiI GAWTC 5 cut(s) 485, 514, 974, 1085, 1198
Tru1I TTAA 6 cut(s) 59, 708, 1059, 1176, 1248, 1331
Tru9I TTAA 6 cut(s) 59, 708, 1059, 1176, 1248, 1331
TscAI CASTG 1 cut(s) 963
TspDTI ATGAA 6 cut(s) 387, 734, 795, 980, 1343, 1355
TspGWI ACGGA 6 cut(s) 323, 396, 400, 432, 575, 773
TspRI CASTG 1 cut(s) 963
Van91I CCANNNNNTGG 1 cut(s) 632
VpaK11BI GGWCC 2 cut(s) 910, 1109
VspI ATTAAT 2 cut(s) 708, 1176
XapI RAATTY 5 cut(s) 303, 745, 988, 1208, 1348
XceI RCATGY 3 cut(s) 1048, 1159, 1296
XmaJI CCTAGG 1 cut(s) 460
XmiI GTMKAC 1 cut(s) 1324
XmnI GAANNNNTTC 1 cut(s) 643
XspI CTAG 3 cut(s) 342, 461, 1230
ZraI GACGTC 1 cut(s) 294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.